TCONS_00035908 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035908
Unique NameTCONS_00035908
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2061

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035908 ID=TCONS_00035908|Name=TCONS_00035908|organism=Clytia hemisphaerica|type=transcript|length=2061bp
tgaaattagagATGTGCTCAACATGGATTGTTGTGTTATATCAATACACT
GAAGATTTGTGAATATTAGTGGGACACAATGAAATTAATTATTGTATTCA
TTGCTGGTCCACCTTGTCATCCACGCCGTTCTTGTGAACGCAACTTGCAG
GAGTAGCTTTGATTTGGTGAATGGCTATTGCGTCAAACTGTTaggattaa
aaaattttaataatgcAAGGAAAGTCTGTTATAAGATGACGCCAACTGCT
GCAGTCCCCCATTGGGCGGGAGATGATGCAAGCATCTTCCGCGCCATCGA
ACAGTTGGGCGGAGACTACAATAATATGAAGGTTTGGGCCAGCGGTGTTT
TTATAGGGACAAAATATATGTGGGGAGTTAATTATGAGACTCCAGTCACC
GACACGACGAATTGGAAAACATCCGCCGCCCCTGGAAAGTGTCTTAAGTA
CAAAGTGAACAAAAAGGACAAAAACAATGGTTATGCTTTGGCAGATTGTA
CCCTATACACCTCACTCTTGTGCcaaagagaaaaaaatgCTCTCGGAAAT
TGTCCAACCCCTTTTACAGGAAGTGCATTTGAAGTTGGGAATATGTGTTT
CAAGGAGCTTGATACAACGGGAGTTCCAGGAGATAACGAGTATTTTTGTA
ATAGTCATGTTCAAAATGATTATGTACCCTTCATGTCACAACCTCTCTCC
AAAGAAGTGATGGATGGATTGTCAACCGATGTAGGAATGCCTGTGGATGT
TTGGACACCATTCCAAAGACGGGTCACAAATTTCACCCTAACACTACTTT
TATGAGAACGCTGCAACTAAATGTCTAAAGTTTGATGGTCGTAATAATGG
GGGTCTGGTACCAGCTGATTGCACAACAAATATTGCAACTCTTTGTTACT
ATGATCCTAATGTTCTATGGCCTGAAGACACCGCTGATGACCTTGACATT
GGTGGCGCTGGCGATAATTCCATCCCTTTGATAGAATGTGGTCTGGACAA
CGTTAACGTCACGGCGTATAAAGGGTATGCTGAAGCGTGTTACGATGCCG
TAACTCATCCGGAGACGTCACACGGAAAAGCAATGGCTTATTGCGGTGAG
CTTCAAGGAACATTGCCTTCTATGGCGTTAAGATACATTTATGAAAGATT
CAATAATTTTACAAAAACACTTGGAATTAATGGTACGGTATGGATCGGGG
GCCACGATCGAATTGAGgaatagtgtggtcgtgttacaaaagtacaggct
gtttgtaggaaaaaaataatatatagctgaaactttctccagaccttctc
tataggatgcttatgcctcaggaaaaaatcccctaaaatcccactggtcg
AACAacccttttttgggcaattttttttttcctcaggcaaaaccctaagg
tcaaaaatttttgaaaatttcaaactctttttgagacaacatcatgtata
ccattcgaaaggtcttgaaaaactatatagaagacttttagacgggtata
gccgattagattacctaactcgagatactTCACGTAGAAGAtgcaatttt
tggtcaattttagaccaaaatgtggcgaaaagttcttgtggattgacttt
ctggttaccccatacaaacacgatgtgacatgaaagtgaagaggcatgat
ttgttggttattgtttgatttcttgacttgtatatcttatggcaaatggg
atagcaaatgacttttcatgtattgcttggctctacatatgatacctcta
actttgaacacctccagaatgttgaaaaaagcattttatgagataagttt
tgattgtaattttcatggaaattgNacaccgtttaacagtctcgccatct
ccaccgtagaggcggtaggtaaaaatgctcactttagtactgtggctgga
aggttagagaaatgtaagcattgccatttttttccttcctttaaagagaa
tgttttagatgtttgaacatgataataatgacaattttatgtatctctcc
tgaaaatttcacaaaaattcatctagaggaaaagaagttatgattaaaag
gagttctttac
Run BLAST on NCBI

protein sequence of TCONS_00035908-protein

>TCONS_00035908-protein ID=TCONS_00035908-protein|Name=TCONS_00035908-protein|organism=Clytia hemisphaerica|type=polypeptide|length=189bp
MTPTAAVPHWAGDDASIFRAIEQLGGDYNNMKVWASGVFIGTKYMWGVNY
ETPVTDTTNWKTSAAPGKCLKYKVNKKDKNNGYALADCTLYTSLLCQREK
NALGNCPTPFTGSAFEVGNMCFKELDTTGVPGDNEYFCNSHVQNDYVPFM
SQPLSKEVMDGLSTDVGMPVDVWTPFQRRVTNFTLTLLL
Run BLAST on NCBI

transcript from alignment at sc0001387:9972..22192-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035908 ID=TCONS_00035908|Name=TCONS_00035908|organism=Clytia hemisphaerica|type=transcript|length=12221bp|location=Sequence derived from alignment at sc0001387:9972..22192- (Clytia hemisphaerica)
TGAAATTAGAGATGTGCTCAACATGGATTGTTGTGTTATATCAATACACT
GAAGATTTGTGAATATTAGTGGGACACAATGAAATTAAGTAAGTGGCATT
ATTCAAAAGTATATATTTCATTATTCTAAAGTCGGGTTTAATAACAATTG
TCAGCTTGATTATACATTTCTCTTAAAGAAATGAGATGAAATTAAAGTAA
AATCTTGTTGGAAAGATAATTCAGAGTAGAATTTCCTAAATCTTTAATTT
TACCCATCAAACTATCTGCCTTGTCGTAGCTTCCTCCGCAGCTTGTACTT
CCCGCTGATGAACAATTTGTTTTTATATTTTGAAAAATCTTGCCGTGACA
GTCTATTTCGGCTAGATAGATTTTGTGTCTCATTTTGTTCCTGTTTTCTT
AAGAATAGTAAATAGATGCTTGTGAAATATATCTTCGACACGGAAAGGTA
ATCCATACCCTGCGCCCATCCGTAACAAATAAAACTCTGCGTTATCTTTC
CTATGAAGAAGAGTTTTGCACATGTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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TTTCAGAACGCAGCTCTCTGTCAGGGTTGGTTACTTTGGATAGGCGTAGG
TAAGATGGCCAATCGGGGTTATGGAGTGCGCTGTGTACGGTTTTTGCCAT
GGCGAGGTCGATCATTTCGGTGACGGGTAGCCATTTCAGCTCGATAACAT
CTTTGATGGAGGCGTGACTCTTCAGCACAAAACCAGCCGCGGCGTTCTGA
ACTTTCTGCAAACGTTTTAGTTGGTATTTTGCAGCATCTGAAAGTAGCAC
AGATCCATACATTACACGTTTTTTTTTTTTTAAGAAACTAGTTTTACCAA
GCAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTC
TTACATGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTTGATGACATTCCATGATTCTGAGGAAGTTTTATTTGCGAGAAGGTTTT
TTAGAAACTTTTTCTTTGCATCTCGGATATTTGATTTGAGATCGTTTCTT
GTCTTTCGGAGCTGCTCCAGCTGTACGGCGTTTCGATCGTTTTTCAGACT
CACTCGAAGTTCTTCTTTCTGACGCTGCAGGTTTCGTACATCTAGATCTT
TCATCCAAGGAGATGACGGGCGTGTCAATTTAACTTTTCGTATAGGTGCA
TGGCGGTCAATACACTCAGTGATTAGTTTATTGAGTGCACTGACCTTATG
TTAGTAATTTACGTCTTTGCTAGGCGTCATGAACGGAAAAATACTAAATT
CTCCTTTTTTTTCCTTTTTATAGTTATTGTATTCATTGCTGGTCCACCTT
GTCATCCACGCCGTTCTTGTGAACGCAAGTAAGTTTCCTCGAGAAATTCC
TAAGAAATTTCTATTGTGATACTCCCGAAACAATCCCAAAATGCATCGCT
TTTTTAGGAAAATCAAATACTCCGATAAGATCTATTGCATGGTTCCATGA
TCATTTTTAGGGCAATTTCATCATGTTATTCTTATAGTGTACATTCTTAT
AAAAACGGAGCGTGTGGTACAATCCAATTATACAACATGATAAATTCTAT
ACGTTCCTTCCCTTCATTTACAGCTTGCAGGAGTAGCTTTGATTTGGTGA
ATGGCTATTGCGTCAAACTGTTAGGATTAAAAAATTTTAATAATGCAAGG
AAAGTCTGTTATAAGATGACGCCAACTGCTGCAGTCCCCCATTGGGCGGG
AGATGATGCAAGCATCTTCCGCGCCATCGAACAGTTGGGCGGAGACTACA
ATAATATGAAGGTTTGGGCCAGCGGTGTTTTTATAGGGACAAAATATATG
TGGGGAGTTAATTGTAAGTATTTCTACATTTTTGTCATTTTACTTTTTGT
TTTGTTTTTAAATGTTTTGTTAACTTCCGCCATTATGAAAGGGAACGCTT
GTAAGGAGGATCGCCTCTGTAGATTCGAACGTTTGCTTCCTTCCTAAATT
TTATTCCATATTATCCATAATAACTACGTAACTGAAAGGTTTTTCTTTTA
ATAAGAGTGATATCATTTGCTTACTCATCAATCTTAATTTACAAGCTTTT
TCACATTGGATTGACACAAATGTGGAGCAAGAGGGAAAGAAAAACATTTT
TTTTGTTTATTCATAGCAACTGATTAAAAATAGTATTATTCAGAATTTGT
TTCTACTGGTAGAAGTAGTCTAACACAGGACATTTTTGAGTAGCTACGCT
CCACCACAGAGACATTCAGAGTTTTGCATAAAAATGTCTGAGACACGGTA
TGTTGCCTAACCGTAACAGACCGAACTTTTCTTTTCAGTCAGCGAAAAAG
AGTTTGGTACAGGCTAACTGTTACCATGGTCTAAAGTGTAAAGTGTTACA
GCAAAGCGATTATATTACGTTCAATTTAAAAGTGTTGCCTATTGCTCTTA
GTGTGATATAGATTACCTATGGATAAACATATTCTGTTTGGTCTTTTTAG
ATGAGACTCCAGTCACCGACACGACGAATTGGAAAACATCCGCCGCCCCT
GGAAAGTGTCTTAAGTACAAAGTGAACAAAAAGGACAAAAACAATGGTTA
TGCTTTGGCAGATTGTACCCTATACACCTCACTCTTGTGCCAAAGAGAAA
AAAATGGTACAGTAATATCAGTCAACTCTCCTTAATTCGAACCTCTTTTA
TTGGAATTTCTCTTTAATTCGAATTAAAATATTGGTTCCCTCCGCTGGAA
AGTTATCCAAAATATTTTCCGTAATTCGAATCTTTCTATATAATTCAAAA
ATGTCAAAGTTGCAATACAATAAAACTGAGCAAAGATTTTCGTAGTCTCT
ATAGATAAACTTCCTATAAGAAACTCTTTCCGCTAGAGGATTAGCCCAGC
AAGGCACACAAAGTTGTTTCAACGTTTGTCTAACGTTCACAACGTTCATA
TAACGTTATATTAACGTTTAAACAACGTTGTGTGCCAGCTGGGCAGAAGC
CTAATATTTTCGTTAATATTAAAGAAAAATTCTCCTATTTTCACCATAGC
TCTCGGAAATTGTCCAACCCCTTTTACAGGAAGTGCATTTGAAGTTGGGA
ATATGTGTTTCAAGGAGCTTGATACAACGGGAGTTCCAGGAGATAACGAG
TATTTTTGTAATAGTCATGTTCAAAATGATTATGTACCCTTCATGTCACA
ACCTCTCTCCAAAGAAGTGATGGATGGATTGTCAACCGATGTAGGAATGC
CTGTGGATGTTTGGACACCATTCCAAAGGCAAACCGATTACTCATACCTT
GGGTTTGAACAATAGACAGCTCCAGGCTTTTAAACTTTACTCTTGGTCTA
TAAGCACTGCTATGGGCGGCCTCTTAGTGACCCCCACCGGGAATTATCGC
TTTTTGATAGGAATAGAAATTTTAAACAAAAGAAGTTCATCAATAGAGAT
TGAAAAAGAAGAATGTTTAAAACACAGCTGATTGGCTTAGGTTTCGAAAC
TCTATTGTTCCATCAAAACTTTAGTGCGCATGCGATGTATCCGGAGAAAT
TCAATATTCAAAACAAGAGCAGTGCGCATGTCCCGAAAAATAGGAGTTTT
ACGCTCGAAACGAAGGAATATATGACGTAGCCTATTTAAATTTTAAAAAT
CCGCAGACACGTGTTTCGTCCTTTCAAGGGCTTGTCAGTGCGGCTCGGGA
TAGCGAGGGTTCAATCCTCAAAATGTCCGATATAATAAGGACCTTGGATT
AGCAACCTAGACCCGCAAAAAAATTAATTGATTGATATAAGAAGTGATTT
CTTTATGATGATTTAATGCCCTCATTTTCTGCCTTTTTAAACTTTTTTGT
AAGGTAATTATTTTTTAGCATTTAGACCATAACTTTTGATCTAATTGACC
AAATTTGACAAACGACCCCTCGAAATTTAAGTTTATCTTTCCTATTTTTA
ATGCGAAATTGATTCTTTAAAAGTCCATAAGACTCGAGAAAATTCACTTC
GACGGACTTTTTTCTGGGACACCCGAAAATAAAAAAGTGCTAAGTTATCG
AATACCCTTCTTCTTCTAAAATTATCGGAAAACAAAGTACAGCCAGATTA
AGACTCAAGTCGAGGGCATGCCCTGTTCTAAACTTGGATACCTTAAGTTT
AGAACAGGGCATGCCCTCGACTTGAGTCTTAATCTGGCTGTACTTTGTTT
TCCGATAATTTTAGAAGACACTGTGTCCAGGAAAGTATAGGTGAAGGGGT
CACCATTTTGAAAATACTACTTAGAGTTGAAGTATTTATTTATAAGTTAG
AAACCATCATGCGAAACAGTCTACCTTAGTCTGAATCGCAGACCTCTACA
AAACTCCAGGTAGTATAAGGAGCACGAGTCTGCTAGTGGATGCCAGCAGC
CTAAGTCCACCTTGGCTAAATCTAAAAACGGAAAAACTACCACATACTCT
ACCGGGCCACTTTAATCACACCATCCAGTCTATGTACAAGCTTTAAACAC
TAAATGTAATATTGGAAGTTAATAAGCGTTTACCTTCGAAATCCATATAA
TAAGCATTAAGGCTAAAATTTAGGAAATCCTTAGCTATCTAAGGCTTGGA
CCAAAATCGGGATTGCTTATAGAAAAATGTATAGTTGGTCCCTTCACTTA
GAAAATCATCCAAAATACTTCCCGTAAATTATAAACTATAATGCCTATAA
TTATAAACCCGAAGAAATTCTTGGTCCCTTGAAGATCGAATGAGAGAGAG
AGAGAGAGTCAACATGAAAAACATATTATTTTACTGTCCGCCTTAGCAAA
AGCCAAAAATGGAGTAATACCATATACTAACGGACCACTTAACCGCGCCA
TCCAGTCTATAAAAAATCTTAAGTGGACCCCGAAGAAGATGTTTGTTCCA
ATTGAAGATTGAATTAATGAGAGAGTCGTCAATAATGCATCATTTGTAAT
TTCTCTTCTTCTAGACGGGTCACAAATTTCACCCTAACACTACTTTTATG
AGAACGCTGCAACTAAATGTCTAAAGTTTGATGGTCGTAATAATGGGGGT
CTGGTACCAGCTGATTGCACAACAAATATTGCAACTCTTTGTTACTATGG
TAAATAGATTTTTCATGGTTTGTTAAGTTACGTCATTTCCGCCATTAGCA
TTATTAAAGCAAACGTTAGAATCTGTAGATGAAATCCCTTACGAAATTAC
GTAACTTGAAAAAATATGAAAAACCTCCTAGACGTTAGATGTTAGATGTT
ATCTCCCGATCAGGAAGGGCTACAGTGGCGTCTTCATAATTCTAACATCC
CTGTCTCGCAGCCCCGATGGAACTTTATCCCACAGTGGAGATAAAAATTT
CTTTGGAAATCTCAATGAGGGTAGAAATTCTATTGTCCTTATAAAACCCA
GTGGAGATGGTTTTGGAGAGAGAATTCTTTTAAATTGAATTTCGAATAAA
CATGTGATCAAAGTCAATTTCCCAGTGAGTTTGAAATTGGGGGTCTGGAA
ATTGGAAGGCATTTTTCCCACCCGGGACGAATTTAGGACAAAAGTGGGTC
TNATTTCCCAGTGGGTTGGAAATTGGAAGGCATTTTTCCCACCCGGGACG
AATTTAGGGCAAAAGTGGGTCTGTGATACAGGGGTGGAATCAAATGTCTT
CTAAACTCGAAAAATTTATTGTCCCTTCATTTAACAATGCCTTCTAAACC
AATCTGCCTAACTTGAAATATCAATAAAATTCTAAAAAATTTGTGTTCCT
TGTGCCTGTCGAGTTATGAAGACTCACTGTATTTCAGAGAGAAAATTACC
CAATGTTGTGGAGGTCATAATTTCAGCCCCGGGATTTCAGCCTTATGGAG
TCGTTTAAAATATCAGAATAGTCTCTTACAGATAGGCAAAACTTCAGGGG
AGGTCACTGAAATTTACACAAAAAGAGGTATCTGAAAATTTTCATCAATA
TACTGATTTTCCAAAGACGATCTCCTGAACAAAAGATGAATAGTTTTTTT
GGGAAAGCCCAACGATATCAGCGGGGAAATCTGTTTATTTGTGCAGAGTT
TACAACCTATAAGAAAAGCAGTTGCCAATAAATTTTCGAGGAAAGACCTC
TTACTCTACCGCCGACTCTATTGGCTGTAAATTCACTTCTGTAATAAAAA
TCTTTCACGAATTTTCCTTCGGCTTGGAGGATACCATTTACATAGTAGAT
TTTCTAGATTTTCCTAAGGAATAAAAACTCCTCTTACAAAAGAATGCTCA
AAAGGAGCGAACTTTTCCATGGAGATCTGGTACATAATATTCTACCAATT
TATTTAGATCCTAATGTTCTATGGCCTGAAGACACCGCTGATGACCTTGA
CATTGGTGGCGCTGGCGATAATTCCATCCCTTTGATAGGTCAGAAATCAT
TAAACTTTAAACTTGAATATGCTTCCCGTTGGAATGCTAAAACAGGCTGT
TCCAAAAAAATTCCACACAGGGGGTGGATGGACGAACCTTTTCAAGTCAA
AACAAATTTCTTGAAAATGTGTTCCCTGGAAAAATGGCAAAATTTGCAAA
AAAGGCCCTGGAAAAAATTAAAGTGAGGGTGGAAGAACTATTCCCAGTCA
TTTACCCCCTGGAAGTTTAAGAATAGCTTTATACCCCCTGGAAATTCTTC
ACCCCCTGAAAAATTTTCGTCCACCTCCTGTATGGTTATAAAATGGAATG
GCCCATTGTAACGATAAAACAAGTGGTTGGTTCAAACGAATAAATAGTCT
ATCTAATCTGATATTGAAATGACTACAGATATACGATTTTAGTTGTTGTT
TTGCAACATCTAGCACTGAAGATGGTTTTACCGAAAAGCTTTTGCTGGAA
ATAAAAATAAAACTTGTTGTATTTTCAACTTAGAAACGCATACGTCTTCG
GATAACGAGGCACAAATGTTTAAGTGTTTTTTATTCCCTTTTGCTGCGTG
GATACTAATGACTAATAGTCACTCAGATACTATACTACTAACGCTCGAAC
CGAAGGCGTAGTGGTATGGTGGTTATCATCCTTGACTCCTGCCTGGGAGG
CCAGAGTTCGATACCCACCGTGTCTCTACGATTCACTTGGCAAGTGAATA
TCCCTTTGCCCGGGTCAACTCATGCCATGTGAGGAGAATCGGGAACCATA
ACTCTGATACAAGAGTGTGGGTAGATTAGACAGACATTGTGACGTGCAGT
GACACTCGTAAGGTTCGACTTCGCGTGAGCATCGCTCTCCCAGTGTCATA
CGCCATGGCTTGACAGCTCGGGTCTGTCAAGTCGCAGTGTCTGTCAGCGC
CGTGATTCCTACTTCTTCGTGGGTAGGACCCGTCCCAAATGCATTTGGAG
GGCTCAATCTATCTATCTATCTATCTCAGTCTATCTATCTATATCTCTAC
TAACGCTTGAACCAAAAACAAACCGACTATTTTTGTGTACTTACATCATA
CGATAATACTAACTTGATTATATCTTGTCTTACTCGCTATACAGAATGTG
GTCTGGACAACGTTAACGTCACGGCGTATAAAGGGTATGCTGAAGCGTGT
TACGATGCCGTAACTCATCCGGAGACGTCACACGGAAAAGCAATGGCTTA
TTGCGGTGAGCTTCAAGGAACATTGCCTTCTATGGCGTTAAGATACATTT
ATGAAAGATTCAATAATTTTACAAAAACACTTGGAATTAATGGTACGGTA
TGGATCGGGGGCCACGATCGAATTGAGGAATAGTGTGGTCGTGTTACAAA
AGTACAGGCTGTTTGTAGGAAAAAAATAATATATAGCTGAAACTTTCTCC
AGACCTTCTCTATAGGATGCTTATGCCTCAGGAAAAAATCCCCTAAAATC
CCACTGGTCGAACAACCCTTTTTTGGGCAATTTTTTTTTTCCTCAGGCAA
AACCCTAAGGTCAAAAATTTTTGAAAATTTCAAACTCTTTTTGAGACAAC
ATCATGTATACCATTCGAAAGGTCTTGAAAAACTATATAGAAGACTTTTA
GACGGGTATAGCCGATTAGATTACCTAACTCGAGATACTTCACGTAGAAG
ATGCAATTTTTGGTCAATTTTAGACCAAAATGTGGCGAAAAGTTCTTGTG
GATTGACTTTCTGGTTACCCCATACAAACACGATGTGACATGAAAGTGAA
GAGGCATGATTTGTTGGTTATTGTTTGATTTCTTGACTTGTATATCTTAT
GGCAAATGGGATAGCAAATGACTTTTCATGTATTGCTTGGCTCTACATAT
GATACCTCTAACTTTGAACACCTCCAGAATGTTGAAAAAAGCATTTTATG
AGATAAGTTTTGATTGTAATTTTCATGGAAATTGNACACCGTTTAACAGT
CTCGCCATCTCCACCGTAGAGGCGGTAGGTAAAAATGCTCACTTTAGTAC
TGTGGCTGGAAGGTTAGAGAAATGTAAGCATTGCCATTTTTTTCCTTCCT
TTAAAGAGAATGTTTTAGATGTTTGAACATGATAATAATGACAATTTTAT
GTATCTCTCCTGAAAATTTCACAAAAATTCATCTAGAGGAAAAGAAGTTA
TGATTAAAAGGAGTTCTTTAC

Coding sequence (CDS) from alignment at sc0001387:9972..22192-

>TCONS_00035908 ID=TCONS_00035908|Name=TCONS_00035908|organism=Clytia hemisphaerica|type=CDS|length=2280bp|location=Sequence derived from alignment at sc0001387:9972..22192- (Clytia hemisphaerica)
ACGGGTCACAAATTTCACCCTAACACTACTTTTATGACTCTCGGAAATTG
TCCAACCCCTTTTACAGGAAGTGCATTTGAAGTTGGGAATATGTGTTTCA
AGGAGCTTGATACAACGGGAGTTCCAGGAGATAACGAGTATTTTTGTAAT
AGTCATGTTCAAAATGATTATGTACCCTTCATGTCACAACCTCTCTCCAA
AGAAGTGATGGATGGATTGTCAACCGATGTAGGAATGCCTGTGGATGTTT
GGACACCATTCCAAAGATGAGACTCCAGTCACCGACACGACGAATTGGAA
AACATCCGCCGCCCCTGGAAAGTGTCTTAAGTACAAAGTGAACAAAAAGG
ACAAAAACAATGGTTATGCTTTGGCAGATTGTACCCTATACACCTCACTC
TTGTGCCAAAGAGAAAAAAATGATGACGCCAACTGCTGCAGTCCCCCATT
GGGCGGGAGATGATGCAAGCATCTTCCGCGCCATCGAACAGTTGGGCGGA
GACTACAATAATATGAAGGTTTGGGCCAGCGGTGTTTTTATAGGGACAAA
ATATATGTGGGGAGTTAATTACGGGTCACAAATTTCACCCTAACACTACT
TTTATGACTCTCGGAAATTGTCCAACCCCTTTTACAGGAAGTGCATTTGA
AGTTGGGAATATGTGTTTCAAGGAGCTTGATACAACGGGAGTTCCAGGAG
ATAACGAGTATTTTTGTAATAGTCATGTTCAAAATGATTATGTACCCTTC
ATGTCACAACCTCTCTCCAAAGAAGTGATGGATGGATTGTCAACCGATGT
AGGAATGCCTGTGGATGTTTGGACACCATTCCAAAGATGAGACTCCAGTC
ACCGACACGACGAATTGGAAAACATCCGCCGCCCCTGGAAAGTGTCTTAA
GTACAAAGTGAACAAAAAGGACAAAAACAATGGTTATGCTTTGGCAGATT
GTACCCTATACACCTCACTCTTGTGCCAAAGAGAAAAAAATGATGACGCC
AACTGCTGCAGTCCCCCATTGGGCGGGAGATGATGCAAGCATCTTCCGCG
CCATCGAACAGTTGGGCGGAGACTACAATAATATGAAGGTTTGGGCCAGC
GGTGTTTTTATAGGGACAAAATATATGTGGGGAGTTAATTACGGGTCACA
AATTTCACCCTAACACTACTTTTATGACTCTCGGAAATTGTCCAACCCCT
TTTACAGGAAGTGCATTTGAAGTTGGGAATATGTGTTTCAAGGAGCTTGA
TACAACGGGAGTTCCAGGAGATAACGAGTATTTTTGTAATAGTCATGTTC
AAAATGATTATGTACCCTTCATGTCACAACCTCTCTCCAAAGAAGTGATG
GATGGATTGTCAACCGATGTAGGAATGCCTGTGGATGTTTGGACACCATT
CCAAAGATGAGACTCCAGTCACCGACACGACGAATTGGAAAACATCCGCC
GCCCCTGGAAAGTGTCTTAAGTACAAAGTGAACAAAAAGGACAAAAACAA
TGGTTATGCTTTGGCAGATTGTACCCTATACACCTCACTCTTGTGCCAAA
GAGAAAAAAATGATGACGCCAACTGCTGCAGTCCCCCATTGGGCGGGAGA
TGATGCAAGCATCTTCCGCGCCATCGAACAGTTGGGCGGAGACTACAATA
ATATGAAGGTTTGGGCCAGCGGTGTTTTTATAGGGACAAAATATATGTGG
GGAGTTAATTACGGGTCACAAATTTCACCCTAACACTACTTTTATGACTC
TCGGAAATTGTCCAACCCCTTTTACAGGAAGTGCATTTGAAGTTGGGAAT
ATGTGTTTCAAGGAGCTTGATACAACGGGAGTTCCAGGAGATAACGAGTA
TTTTTGTAATAGTCATGTTCAAAATGATTATGTACCCTTCATGTCACAAC
CTCTCTCCAAAGAAGTGATGGATGGATTGTCAACCGATGTAGGAATGCCT
GTGGATGTTTGGACACCATTCCAAAGATGAGACTCCAGTCACCGACACGA
CGAATTGGAAAACATCCGCCGCCCCTGGAAAGTGTCTTAAGTACAAAGTG
AACAAAAAGGACAAAAACAATGGTTATGCTTTGGCAGATTGTACCCTATA
CACCTCACTCTTGTGCCAAAGAGAAAAAAATGATGACGCCAACTGCTGCA
GTCCCCCATTGGGCGGGAGATGATGCAAGCATCTTCCGCGCCATCGAACA
GTTGGGCGGAGACTACAATAATATGAAGGTTTGGGCCAGCGGTGTTTTTA
TAGGGACAAAATATATGTGGGGAGTTAATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_021088XLOC_021088Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035908-exon-sc0001387-1575043694:22105..22192TCONS_00035908-exon-sc0001387-1575043694:22105..22192Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:17165..17219TCONS_00035908-exon-sc0001387-1575043694:17165..17219Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:16680..16919TCONS_00035908-exon-sc0001387-1575043694:16680..16919Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:15887..16042TCONS_00035908-exon-sc0001387-1575043694:15887..16042Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:15265..15493TCONS_00035908-exon-sc0001387-1575043694:15265..15493Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:13444..13578TCONS_00035908-exon-sc0001387-1575043694:13444..13578Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:12155..12235TCONS_00035908-exon-sc0001387-1575043694:12155..12235Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1575043694:9972..11048TCONS_00035908-exon-sc0001387-1575043694:9972..11048Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:22105..22192TCONS_00035908-exon-sc0001387-1510915933:22105..22192Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:17165..17219TCONS_00035908-exon-sc0001387-1510915933:17165..17219Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:16680..16919TCONS_00035908-exon-sc0001387-1510915933:16680..16919Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:15887..16042TCONS_00035908-exon-sc0001387-1510915933:15887..16042Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:15265..15493TCONS_00035908-exon-sc0001387-1510915933:15265..15493Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:13444..13578TCONS_00035908-exon-sc0001387-1510915933:13444..13578Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:12155..12235TCONS_00035908-exon-sc0001387-1510915933:12155..12235Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1510915933:9972..11048TCONS_00035908-exon-sc0001387-1510915933:9972..11048Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:22105..22192TCONS_00035908-exon-sc0001387-1491911889:22105..22192Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:17165..17219TCONS_00035908-exon-sc0001387-1491911889:17165..17219Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:16680..16919TCONS_00035908-exon-sc0001387-1491911889:16680..16919Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:15887..16042TCONS_00035908-exon-sc0001387-1491911889:15887..16042Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:15265..15493TCONS_00035908-exon-sc0001387-1491911889:15265..15493Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:13444..13578TCONS_00035908-exon-sc0001387-1491911889:13444..13578Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:12155..12235TCONS_00035908-exon-sc0001387-1491911889:12155..12235Clytia hemisphaericaexon
TCONS_00035908-exon-sc0001387-1491911889:9972..11048TCONS_00035908-exon-sc0001387-1491911889:9972..11048Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035908-proteinTCONS_00035908-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001387supercontigsc0001387:9972..22192 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.51775	5.32395	4.33991	4.34065	24.825	17.496	23.4373	23.4359	9.49697	12.4181	10.3833	10.6673	15.0239	13.5243	7.90668	9.39141	9.06663	8.39333	10.5919	12.3561	9.83339	9.88996	7.04833	8.51799	15.1124	23.8683	13.3503	11.6424	11.4446	9.99783
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00035908 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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