TCONS_00035739 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00035739
Unique Name	TCONS_00035739
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	7092

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0001355:48895..56275-
coding sequence from alignment at sc0001355:48895..56275-

transcript sequence

>TCONS_00035739 ID=TCONS_00035739|Name=TCONS_00035739|organism=Clytia hemisphaerica|type=transcript|length=7092bp
ACAAACAATTGTAAATACATTTAATTAAGTGAGATTTTCCTACGCCCGCA
CCACCtgttaaaaatattctcaatggtTCTAGTAGTACAGGATTATTGGA
CTTAGAATTTTGCACATACATTTTTCCCAAATTTAGTACTATATCAAAAA
TATCTCTTTGCTTAGAATTTAAAGATCTTCTATGGGTATTGATTTGGTCA
TCAGTTTGCAAGCCATGAACTGTTTGAGTAAATAGtgcaaaattttgttc
aatatcatgactttcatcatcattttcactgtcTGATGAGTTGCTCATTA
GANACCCGACCTTCTCGAAAAACCAGAAACATCCGAAATTTGCGGCGGTA
CCTTCAAGTTGCTTCCATTAGTTCCGATGGATTGCTGATTCACCGCAAAC
AAGATCCATATGTTGCAGAGCGAAAGCTCATCATCGTATCTCAACAGATT
CTACCGGGACTCTTAACAGCGTTACACCTACACTTCAGACACGCCACTCG
TAACCAACTGCTTCAACTCTTCAACCGCTATTTCTATGCTTTGAACTGTG
ACGACGCAGTCAAAAACACCGTTACCAACTGCGCCCAATGTACCTCACTC
CAACGACTTCCCAAGGAACTCGTGCAACAAAGTTCCTCACCATCACCAAA
ATCTCCCGGCGAACAGTTTGCTTCTGACGTTATCCGACGTGCCAAACAGA
AAATTCTGCTAACTCGTGACGTACATTCATCCTTCACGACGGCCACAACC
ATTCCAGATGAAACCGCTGACTCCCTTCGTGCATCACTGATCTCCACAAC
ATCACTCGTTCGCAAGGATCAATGCTTTATTAGAGTCGACAACGCCCCAG
GATTCCAAGCGCTCCACAATGACGGGATCCTTCATCAACATGGGATCACT
ATTGATCTTGGACGTATCAAAAATCCGAACAAAAACCCGGTAGCTGAGAG
AGCCGTTCAAGAACTTGAGGAAGAGCTTTTGCGAATCAATCCATCCGGTA
AAGCCGTTTCATTCTCCGAGCTATCATTGGCTGTAAACACCATCAATTCA
CGAATACGCAACCGAGGACTCTCAGCCAAAGAAATCTTGTTCCGTCGCGA
TCAGATCACTGGAGAAAGTCTTGATATTGACGACAACCATCTCAGTAACC
AACAAAAGGAATACCGTCATCGTAATCACGCTGCTAGTGCCCTTTCGAAA
ATCAAGGGACATCCAATAAAGTTACCAACAAAATCCATCCATGTTGGAGA
TCTTGTCTATATTAAGAACGATAAAGACAAGTTCAAAGCGCGTGAACGTT
ATATAGTGATGCAAATCAGAAATAGTGTCGCTATAATCCAGAAGATCAAC
GGTTCCTCATTTATGTCGAGACGGTACGAGGTGCCTTTAACATCAATCTA
CCCAGTCCAGCCTGAAGAAATATCTTTCCGTCCACAAAATCCGACCATCG
AAAGCGAATCCGATGAAGACGAAGACGAAGATGAAGACGTATCACCATCC
GATAATGATGACATCGCAATCGAGAACGAAGCCCCGGTCGCTGCTCGACC
ACAACGTAATCGACGTGAGCCTCGTTGGCTCCTGGACGATATCTGGGACC
GATCATGAGTCCATCACCGTTGTATATATTGAACTTGATATGAGTTATTG
TTTCATTTCTTGATGCCAATCCATTGCTATATGGGCATTGAGTTATTACT
TACTGGCGTTATTTTTTGCTGGTATTTGGTTATGTTCACTGAAATTGAGT
TATTGTTATATGCTTGTATTGAGTTATTATTGTTTCACTGGCATCAAGTT
ATTGTTGAGCTATTATTATTTGCTGGTATTGAAATTATGTTTCATTTGCT
GGCATTGAATTGATGTTATATTTGCTGGCATCATGTTGATATTATATTTA
CTGGTTATTGCTATTGGTACAATGGTTTTGTTATTGAGACATGTTATATG
GTTTGTTGATTATTGATACTTACACTATGTCAGCATAGGCTGAGTGGAAA
GTGACCACGCCATATATTTGAtattatattttgttattttatttcatttc
agcTAGATATACATACAGATATACATATTATTGTTCTGGGTTTAATAATT
GCTATATCACGGAATCTTGCCATTTCAATTATTTGGCGTGGTGACAGCAC
GAAACGATCCTCCGCCATCTTCACAAGATAGACATACTGTAATTGTACCA
CAGAAACCCAGACTTTAATATGGCTAGCTTTAAACCACCAAAGCAATGGG
TGTTAACTGAACAAGAGACAATCACTTCCTTTGCAAGTTGGCAAAGCAAT
ATTATTTACCATCTGAGTCTGAACAATGAATTTGCTCAGTTCATCGAACC
GACTGCTGCTTGGCAAAAGCAATCCGTTACAAACAGGGGTCTCGCCAACG
ACCCAAATACAGTCCCAGAAAACCGCAGACGAACCGCTTTGCAAAAGAAC
ATACTCCTTGATCAAATGCTGGGACTAATAGCACAATTCTCGCCTTCATT
ATTACGCTCGGACATCATCAAACGTAGCACCAGTCTTCAATGGATATGGC
AGAGAATCAGAAAGCACTACTCATTTTGCCAGTCTGAAGttaacttttta
aaactttcgACTATCAAACGCCAAGAAGGAGAAAGATTTGAGACATTATT
CCAAAGAATCGTTGCCCATATTGAGGACAATTTACTAACAACAGAATCAG
GGTTAACGCATGACGGAGCCCTGGTAACAGAAAACGAAGAAATGTCCCCA
ACCACTGAGAGACTAGCCGTATATCTATGGCTAAATTTGATTGACGAGCG
TCTTCCATCTTATGTCGCTAGAGTATTTGCTCACGATCTACAATCACGCT
CGCTAAAGGATATCCAACCACAGATATGTGCGGCAATGGACTCCTTACTT
ACCGAATTAAATGTCCAAGAGGATATTCAAGTCAACTACTCACGCTCGAG
CTACAACAATCGCCGTTATCCTGGAAAACCAAGTCAACGAAATTCACATC
CTCAAAAATCACATCAAAAGTCGAAAACCTGCATTCTGTGTAAGGCTGCA
AGTCGACCCTACCAAGGACATGATGTTTCCACATGCTGGTTCATCAGTAA
ATTTGACAAGAAGGAGATCGCAAGCGCACTAGCTGTTGAAGTAGATCCTG
GTAACGATCTTGAAGATCCTCTAGATCACAGTGACGTCAAATCGTGTACA
TCAGCGCCTCCACCCGACAAACTCGAACAAGGTACATCCATCGCTCGAGT
TCAATCCAACTCATCGCCATTCTTCTACGCGTTTCTGAAACACCATACAT
GTCGCGTAGTTATTGACACGGGCGCCACATCCTCGTTAGTTTCTGCTGAT
TTTATCGCAAGAGCAGGGATCAAACTAACTCCTACATCTCATGCTGCTCG
TCAAATTGATAAGACTCCTCTCAACCTCCTCGGCGAAGCAaagtttaaat
tattttttggcgattatGAACTTCCTATTGAGGCATTAGTGACTGAATCA
TTAGATTGCGACATCCTTGCAGGTGTCCCTTTCTGCAAGTCTAACAACAT
CGACGTGCATCTTGGTACAGAAGAGATCTCGTTAAACCAGAAACGCATAC
CGTATGGTTCAAGACCCAATTCCATTCAACACGACATCTACCGAGTCCAA
TCAACTGTTTTACGAAATGATTCCACATCCGTTGTGTACCCAGGAGAATT
CCTTGAGATTCATAACCAAGCAATTTCACATTACGAAGGTGAGGTTGCTA
TCGAACCTAGAACTGACTCGCCAGCCAATGGTAATTGGCCACCACCTACT
ATCTCTCGTGTGATTAATGGAACGGTCAGAATTCCAAACGAAACGAACTC
TCCTGTCTATGTATCCAAGTCACAACACATTGCAACTATACGACGTGTCA
CAACACCAACACCGCCAACACCTTTTCATCAGTCTGAAGTCATCTCTCCA
GCTTCTAAACAACTGATCACAGACTGCAAACCGAAATCCATCCTTTTTTC
CAGCAATATCTTAGTCGATCCTGACAGTCAATTGACACCTAGTGAGAAGG
GACAATTTCTCCAACTACATAAAGACTACGACAATGTCTTTAACCCACAA
TTCGGTGTCTATAACGACAACAGTGGAAGAATACGTGCCAAACTCAATTT
CGGTAATGTTGACCCTCCTCCACGAAAACCAAAGTTACCGTTCTACAACC
ACACTCAGTTACAACAACTACAGGAGGAAGCCGATAAGTTGGAAGCCCTG
GGAGTACTCGCAAAACCTGAAGACGTGGGTGTCGACGTACAGTTTGCTTC
TCCAAGTCTACTCGTAAAGAAACCAGACGGCTCCTTTCGATTCTGCACTG
CTTTCAACGAATTGTGTCAGTACACGAAAGTCTTACCTGTCGCTTCTCAA
AGCTGCGATGACGTCCTACGCCGTTTGTCATCGTGGAAGTACTTAATCAA
GACCGACCTCaccaaaagtttctttcaaattCCTTTAGATTCCGCTTCCG
TACCGTATCTAGGAACAGTAACACCGTTTAAAGGACTGCGTATCTACCTT
CGTTCCGCTATGGGTATGCCAGGCTCTTCGGAACATTTGCAAGAACTGAC
ATCCCGTGTTCTTGGTGATTTTATCCAAGAAGGATTTGTTACTGTCCTTG
CCGACGACCTTCACGTTGGAGGAAACACTATCCAAGAGACATTTATTAAT
TGGTCCCGCGTACTCCATCGATTGAGAGAGAACAACCTTACTCTCTCGGC
CAGTAAAACCGTAATCTGCCCCAAATCTACCACCGTGCTTGGATGGAGAT
GGACATCCGGACAGCTGTCTGTCACTCCTCACAAGATCTCGCCTTTGGTT
GCATCAGCACCACCCACAACGTGCACTGCTATGCGTTCTTATATCGGTGC
ATACAAAGCAATCGCTAGATGTATCCCTCGACACTCATCGCTGTTATCGC
CACTAGAAgcaatcatcaaaaacACTTCTCACCGTACATCCGCGAATCCA
AAAACCCTTTACAACTTCTTTCGGACAATAAGCCGTGTGTCCAGGCATTT
GCCAAGTTGAAGCAAGGACATTTTTCAGCATCATCACGAGTATCTACGTT
TTTAGCGTGTCTGAGCAACTACCCCATCACAATGTGCCATCTTAAGGGAA
CGTCAAACCCGACCAGCGATTTTTCATCAAGACATCCTCAAGAGTGCTCT
GATTCCTCGTGTCAGATCTGCAAATTCGTTAACGATACTGCATCCTCTGT
TGTTGCATCCGTCCAGGTATCTGACGTTCTATCTGGTCAAGCTCGTATGC
CATTCTTGAATTCAAACGCATGGAGATCAGCTCAGCATGACTGCAACGAT
CTTCGTCGTACCTACGCACATCTGTCCAAAGGAACCCGACCTTCTCGAAA
AACCAGAAACATCCGAAATTTGCGGCGGTACCTTCAAGTTGCTTCCATTA
GTTCCGATGGATTGCTGATTCACCGCAAACAAGATCCATATGTTGCAGAG
CGAAAGCTCATCATCGTATCTCAACAGATTCTACCGGGACTCTTAACAGC
GTTACACCTACACTTCAGACACGCCACTCGTAACCAACTGCTTCAACTCT
TCAACCGCTATTTCTATGCTTTGAACTGTGACGACGCAGTCAAAAACACC
GTTACCAACTGCGCCCAATGTACCTCACTCCAACGACTTCCCAAGGAACT
CGTGCAACAAAGTTCCTCACCATCACCAAAATCTCCCGGCGAACAGTTTG
CTTCTGACGTTATCCGACGTGCCAAACAGAAAATTCTGCTAACTCGTGAC
GTACATTCATCCTTCACGACGGCCACAACCATTCCAGATGAAACCGCTGA
CTCCCTTCGTGCATCACTGATCTCCACAACATCACTCGTTCGCAAGGATC
AATGCTTTATTAGAGTCGACAACGCCCCAGGATTCCAAGCGCTCCACAAT
GACGGGATCCTTCATCAACATGGGATCACTATTGATCTTGGACGTATCAA
AAATCCGAACAAAAACCCGGTAGCTGAGAGAGCCGTTCAAGAACTTGAGG
AAGAGCTTTTGCGAATCAATCCATCCGGTAAAGCCGTTTCATTCTCCGAG
CTATCATTGGCTGTAAACACCATCAATTCACGAATACGCAACCGAGGACT
CTCAGCCAAAGAAATCTTGTTCCGTCGCGATCAGATCACTGGAGAAAGTC
TTGATATTGACGACAACCATCTCAGTAACCAACAAAAGGAATACCGTCAT
CGTAATCACGCTGCTAGTGCCCTTTCGAAAATCAAGGGACATCCAATAAA
GTTACCAACAAAATCCATCCATGTTGGAGATCTTGTCTATATTAAGAACG
ATAAAGACAAGTTCAAAGCGCGTGAACGTTATATAGTGATGCAAATCAGA
AATAGTGTCGCTATAATCCAGAAGATCAACGGTTCCTCATTTATGTCGAG
ACGGTACGAGGTGCCTTTAACATCAATCTACCCAGTCCAGCCTGAAGAAA
TATCTTTCCGTCCACAAAATCCGACCATCGAAAGCGAATCCGATGAAGAC
GAAGACGAAGATGAAGACGTATCACCATCCGATAATGATGACATCGCAAT
CGAGAACGAAGCCCCGGTCGCTGCTCGACCACAACGTAATCGACGTGAGC
CTCGTTGGCTCCTGGACGATATCTGGGACCGATCATGAGTCCATCACCGT
TGTATATATTGAACTTGATATGAGTTATTGTTTCATTTCTTGATGCCAAT
CCATTGCTATATGGGCATTGAGTTATTACTTACTGGCGTTATTTTTTGCT
GGTATTTGGTTATGTTCACTGAAATTGAGTTATTGTTATATGCTTGTATT
GAGTTATTATTGTTTCACTGGCATCAAGTTATTGTTGAGCTATTATTATT
TGCTGGTATTGAAATTATGTTTCATTTGCTGGCATTGAATTGATGTTATA
TTTGCTGGCATCATGTTGATATTATATTTACTGGTTATTGCTATTGGTAC
AATGGTTTTGTTATTGAGACATGTTATATGGTTTGTTGATTATTGATACT
TACACTATGTCAGCATAGGCTGAGTGGAAAGTGACCACGCCA

Run BLAST on NCBI

protein sequence of TCONS_00035739-protein

>TCONS_00035739-protein ID=TCONS_00035739-protein|Name=TCONS_00035739-protein|organism=Clytia hemisphaerica|type=polypeptide|length=946bp
MASFKPPKQWVLTEQETITSFASWQSNIIYHLSLNNEFAQFIEPTAAWQK
QSVTNRGLANDPNTVPENRRRTALQKNILLDQMLGLIAQFSPSLLRSDII
KRSTSLQWIWQRIRKHYSFCQSEVNFLKLSTIKRQEGERFETLFQRIVAH
IEDNLLTTESGLTHDGALVTENEEMSPTTERLAVYLWLNLIDERLPSYVA
RVFAHDLQSRSLKDIQPQICAAMDSLLTELNVQEDIQVNYSRSSYNNRRY
PGKPSQRNSHPQKSHQKSKTCILCKAASRPYQGHDVSTCWFISKFDKKEI
ASALAVEVDPGNDLEDPLDHSDVKSCTSAPPPDKLEQGTSIARVQSNSSP
FFYAFLKHHTCRVVIDTGATSSLVSADFIARAGIKLTPTSHAARQIDKTP
LNLLGEAKFKLFFGDYELPIEALVTESLDCDILAGVPFCKSNNIDVHLGT
EEISLNQKRIPYGSRPNSIQHDIYRVQSTVLRNDSTSVVYPGEFLEIHNQ
AISHYEGEVAIEPRTDSPANGNWPPPTISRVINGTVRIPNETNSPVYVSK
SQHIATIRRVTTPTPPTPFHQSEVISPASKQLITDCKPKSILFSSNILVD
PDSQLTPSEKGQFLQLHKDYDNVFNPQFGVYNDNSGRIRAKLNFGNVDPP
PRKPKLPFYNHTQLQQLQEEADKLEALGVLAKPEDVGVDVQFASPSLLVK
KPDGSFRFCTAFNELCQYTKVLPVASQSCDDVLRRLSSWKYLIKTDLTKS
FFQIPLDSASVPYLGTVTPFKGLRIYLRSAMGMPGSSEHLQELTSRVLGD
FIQEGFVTVLADDLHVGGNTIQETFINWSRVLHRLRENNLTLSASKTVIC
PKSTTVLGWRWTSGQLSVTPHKISPLVASAPPTTCTAMRSYIGAYKAIAR
CIPRHSSLLSPLEAIIKNTSHRTSANPKTLYNFFRTISRVSRHLPS

Run BLAST on NCBI

transcript from alignment at sc0001355:48895..56275-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00035739 ID=TCONS_00035739|Name=TCONS_00035739|organism=Clytia hemisphaerica|type=transcript|length=7381bp|location=Sequence derived from alignment at sc0001355:48895..56275- (Clytia hemisphaerica)
ACAAACAATTGTAAATACATTTAATTAAGTGAGATTTTCCTACGCCCGCA
CCACCTGTTAAAAATATTCTCAATGGTTCTAGTAGTACAGGATTATTGGA
CTTAGAATTTTGCACATACATTTTTCCCAAATTTAGTACTATATCAAAAA
TATCTCTTTGCTTAGAATTTAAAGATCTTCTATGGGTATTGATTTGGTCA
TCAGTTTGCAAGCCATGAACTGTTTGAGTAAATAGTGCAAAATTTTGTTC
AATATCATGACTTTCATCATCATTTTCACTGTCTGATGAGTTGCTCATTA
GANACCCGACCTTCTCGAAAAACCAGAAACATCCGAAATTTGCGGCGGTA
CCTTCAAGTTGCTTCCATTAGTTCCGATGGATTGCTGATTCACCGCAAAC
AAGATCCATATGTTGCAGAGCGAAAGCTCATCATCGTATCTCAACAGATT
CTACCGGGACTCTTAACAGCGTTACACCTACACTTCAGACACGCCACTCG
TAACCAACTGCTTCAACTCTTCAACCGCTATTTCTATGCTTTGAACTGTG
ACGACGCAGTCAAAAACACCGTTACCAACTGCGCCCAATGTACCTCACTC
CAACGACTTCCCAAGGAACTCGTGCAACAAAGTTCCTCACCATCACCAAA
ATCTCCCGGCGAACAGTTTGCTTCTGACGTTATCCGACGTGCCAAACAGA
AAATTCTGCTAACTCGTGACGTACATTCATCCTTCACGACGGCCACAACC
ATTCCAGATGAAACCGCTGACTCCCTTCGTGCATCACTGATCTCCACAAC
ATCACTCGTTCGCAAGGATCAATGCTTTATTAGAGTCGACAACGCCCCAG
GATTCCAAGCGCTCCACAATGACGGGATCCTTCATCAACATGGGATCACT
ATTGATCTTGGACGTATCAAAAATCCGAACAAAAACCCGGTAGCTGAGAG
AGCCGTTCAAGAACTTGAGGAAGAGCTTTTGCGAATCAATCCATCCGGTA
AAGCCGTTTCATTCTCCGAGCTATCATTGGCTGTAAACACCATCAATTCA
CGAATACGCAACCGAGGACTCTCAGCCAAAGAAATCTTGTTCCGTCGCGA
TCAGATCACTGGAGAAAGTCTTGATATTGACGACAACCATCTCAGTAACC
AACAAAAGGAATACCGTCATCGTAATCACGCTGCTAGTGCCCTTTCGAAA
ATCAAGGGACATCCAATAAAGTTACCAACAAAATCCATCCATGTTGGAGA
TCTTGTCTATATTAAGAACGATAAAGACAAGTTCAAAGCGCGTGAACGTT
ATATAGTGATGCAAATCAGAAATAGTGTCGCTATAATCCAGAAGATCAAC
GGTTCCTCATTTATGTCGAGACGGTACGAGGTGCCTTTAACATCAATCTA
CCCAGTCCAGCCTGAAGAAATATCTTTCCGTCCACAAAATCCGACCATCG
AAAGCGAATCCGATGAAGACGAAGACGAAGATGAAGACGTATCACCATCC
GATAATGATGACATCGCAATCGAGAACGAAGCCCCGGTCGCTGCTCGACC
ACAACGTAATCGACGTGAGCCTCGTTGGCTCCTGGACGATATCTGGGACC
GATCATGAGTCCATCACCGTTGTATATATTGAACTTGATATGAGTTATTG
TTTCATTTCTTGATGCCAATCCATTGCTATATGGGCATTGAGTTATTACT
TACTGGCGTTATTTTTTGCTGGTATTTGGTTATGTTCACTGAAATTGAGT
TATTGTTATATGCTTGTATTGAGTTATTATTGTTTCACTGGCATCAAGTT
ATTGTTGAGCTATTATTATTTGCTGGTATTGAAATTATGTTTCATTTGCT
GGCATTGAATTGATGTTATATTTGCTGGCATCATGTTGATATTATATTTA
CTGGTTATTGCTATTGGTACAATGGTTTTGTTATTGAGACATGTTATATG
GTTTGTTGATTATTGATACTTACACTATGTCAGCATAGGCTGAGTGGAAA
GTGACCACGCCATATATTTGATATTATATTTTGTTATTTTATTTCATTTC
AGCTAGATATACATACAGATATACATATTATTGTTCTGGGTTTAATAATT
GCTATATCACGGAATCTTGCCATTTCAATTATTTGGCGTGGTGACAGCAC
GAAACGATCCTCCGCCATCTTCACAAGATAGACATACTGTAATTGTACCA
CAGAAACCCAGACTTTAATATGGCTAGCTTTAAACCACCAAAGCAATGGG
TGTTAACTGAACAAGAGACAATCACTTCCTTTGCAAGTTGGCAAAGCAAT
ATTATTTACCATCTGAGTCTGAACAATGAATTTGCTCAGTTCATCGAACC
GACTGCTGCTTGGCAAAAGCAATCCGTTACAAACAGGGGTCTCGCCAACG
ACCCAAATACAGTCCCAGAAAACCGCAGACGAACCGCTTTGCAAAAGAAC
ATACTCCTTGATCAAATGCTGGGACTAATAGCACAATTCTCGCCTTCATT
ATTACGCTCGGACATCATCAAACGTAGCACCAGTCTTCAATGGATATGGC
AGAGAATCAGAAAGCACTACTCATTTTGCCAGTCTGAAGTTAACTTTTTA
AAACTTTCGACTATCAAACGCCAAGAAGGAGAAAGATTTGAGACATTATT
CCAAAGAATCGTTGCCCATATTGAGGACAATTTACTAACAACAGAATCAG
GGTTAACGCATGACGGAGCCCTGGTAACAGAAAACGAAGAAATGTCCCCA
ACCACTGAGAGACTAGCCGTATATCTATGGCTAAATTTGATTGACGAGCG
TCTTCCATCTTATGTCGCTAGAGTATTTGCTCACGATCTACAATCACGCT
CGCTAAAGGATATCCAACCACAGATATGTGCGGCAATGGACTCCTTACTT
ACCGAATTAAATGTCCAAGAGGATATTCAAGTCAACTACTCACGCTCGAG
CTACAACAATCGCCGTTATCCTGGAAAACCAAGTCAACGAAATTCACATC
CTCAAAAATCACATCAAAAGTCGAAAACCTGCATTCTGTGTAAGGCTGCA
AGTCGACCCTACCAAGGACATGATGTTTCCACATGCTGGTTCATCAGTAA
ATTTGACAAGAAGGAGATCGCAAGCGCACTAGCTGTTGAAGTAGATCCTG
GTAACGATCTTGAAGATCCTCTAGATCACAGTGACGTCAAATCGTGTACA
TCAGCGCCTCCACCCGACAAACTCGAACAAGGTACATCCATCGCTCGAGT
TCAATCCAACTCATCGCCATTCTTCTACGCGTTTCTGAAACACCATACAT
GTCGCGTAGTTATTGACACGGGCGCCACATCCTCGTTAGTTTCTGCTGAT
TTTATCGCAAGAGCAGGGATCAAACTAACTCCTACATCTCATGCTGCTCG
TCAAATTGATAAGACTCCTCTCAACCTCCTCGGCGAAGCAAAGTTTAAAT
TATTTTTTGGCGATTATGAACTTCCTATTGAGGCATTAGTGACTGAATCA
TTAGATTGCGACATCCTTGCAGGTGTCCCTTTCTGCAAGTCTAACAACAT
CGACGTGCATCTTGGTACAGAAGAGATCTCGTTAAACCAGAAACGCATAC
CGTATGGTTCAAGACCCAATTCCATTCAACACGACATCTACCGAGTCCAA
TCAACTGTTTTACGAAATGATTCCACATCCGTTGTGTACCCAGGAGAATT
CCTTGAGATTCATAACCAAGCAATTTCACATTACGAAGGTGAGGTTGCTA
TCGAACCTAGAACTGACTCGCCAGCCAATGGTAATTGGCCACCACCTACT
ATCTCTCGTGTGATTAATGGAACGGTCAGAATTCCAAACGAAACGAACTC
TCCTGTCTATGTATCCAAGTCACAACACATTGCAACTATACGACGTGTCA
CAACACCAACACCGCCAACACCTTTTCATCAGTCTGAAGTCATCTCTCCA
GCTTCTAAACAACTGATCACAGACTGCAAACCGAAATCCATCCTTTTTTC
CAGCAATATCTTAGTCGATCCTGACAGTCAATTGACACCTAGTGAGAAGG
GACAATTTCTCCAACTACATAAAGACTACGACAATGTCTTTAACCCACAA
TTCGGTGTCTATAACGACAACAGTGGAAGAATACGTGCCAAACTCAATTT
CGGTAATGTTGACCCTCCTCCACGAAAACCAAAGTTACCGTTCTACAACC
ACACTCAGTTACAACAACTACAGGAGGAAGCCGATAAGTTGGAAGCCCTG
GGAGTACTCGCAAAACCTGAAGACGTGGGTGTCGACGTACAGTTTGCTTC
TCCAAGTCTACTCGTAAAGAAACCAGACGGCTCCTTTCGATTCTGCACTG
CTTTCAACGAATTGTGTCAGTACACGAAAGTCTTACCTGTCGCTTCTCAA
AGCTGCGATGACGTCCTACGCCGTTTGTCATCGTGGAAGTACTTAATCAA
GACCGACCTCACCAAAAGTTTCTTTCAAATTCCTTTAGATTCCGCTTCCG
TACCGTATCTAGGAACAGTAACACCGTTTAAAGGACTGCGTATCTACCTT
CGTTCCGCTATGGGTATGCCAGGCTCTTCGGAACATTTGCAAGAACTGAC
ATCCCGTGTTCTTGGTGATTTTATCCAAGAAGGATTTGTTACTGTCCTTG
CCGACGACCTTCACGTTGGAGGAAACACTATCCAAGAGACATTTATTAAT
TGGTCCCGCGTACTCCATCGATTGAGAGAGAACAACCTTACTCTCTCGGC
CAGTAAAACCGTAATCTGCCCCAAATCTACCACCGTGCTTGGATGGAGAT
GGACATCCGGACAGCTGTCTGTCACTCCTCACAAGATCTCGCCTTTGGTT
GCATCAGCACCACCCACAACGTGCACTGCTATGCGTTCTTATATCGGTGC
ATACAAAGCAATCGCTAGATGTATCCCTCGACACTCATCGCTGTTATCGC
CACTAGAAGCAATCATCAAAAACATGGACGGTTCTCAGAAAATCAATTGG
TCACCTGAGGACTTAGCTCATTTCAAGTCATCTCAAGATGCTCTCAAATC
ACCAAGCATCCTTACCATCCCGACTCCTGATGATCAACTTATCATGACTG
TCGATGCCGCTCCAGTGAACAATGGTATTGGTGCCACCCTCTACATCCTA
CGAGACAACAAACGTTCTCTTGCAGACAACTTCAGCCTCAAACTGAAGGA
GCACCAGTACGGATGGCAGCCTTGCGAACATGAGGCTCTAGCCATAACTG
CGGGTGTGAAACACTTCTCACCGTACATCCGCGAATCCAAAAACCCTTTA
CAACTTCTTTCGGACAATAAGCCGTGTGTCCAGGCATTTGCCAAGTTGAA
GCAAGGACATTTTTCAGCATCATCACGAGTATCTACGTTTTTAGCGTGTC
TGAGCAACTACCCCATCACAATGTGCCATCTTAAGGGAACGTCAAACCCG
ACCAGCGATTTTTCATCAAGACATCCTCAAGAGTGCTCTGATTCCTCGTG
TCAGATCTGCAAATTCGTTAACGATACTGCATCCTCTGTTGTTGCATCCG
TCCAGGTATCTGACGTTCTATCTGGTCAAGCTCGTATGCCATTCTTGAAT
TCAAACGCATGGAGATCAGCTCAGCATGACTGCAACGATCTTCGTCGTAC
CTACGCACATCTGTCCAAAGGAACCCGACCTTCTCGAAAAACCAGAAACA
TCCGAAATTTGCGGCGGTACCTTCAAGTTGCTTCCATTAGTTCCGATGGA
TTGCTGATTCACCGCAAACAAGATCCATATGTTGCAGAGCGAAAGCTCAT
CATCGTATCTCAACAGATTCTACCGGGACTCTTAACAGCGTTACACCTAC
ACTTCAGACACGCCACTCGTAACCAACTGCTTCAACTCTTCAACCGCTAT
TTCTATGCTTTGAACTGTGACGACGCAGTCAAAAACACCGTTACCAACTG
CGCCCAATGTACCTCACTCCAACGACTTCCCAAGGAACTCGTGCAACAAA
GTTCCTCACCATCACCAAAATCTCCCGGCGAACAGTTTGCTTCTGACGTT
ATCCGACGTGCCAAACAGAAAATTCTGCTAACTCGTGACGTACATTCATC
CTTCACGACGGCCACAACCATTCCAGATGAAACCGCTGACTCCCTTCGTG
CATCACTGATCTCCACAACATCACTCGTTCGCAAGGATCAATGCTTTATT
AGAGTCGACAACGCCCCAGGATTCCAAGCGCTCCACAATGACGGGATCCT
TCATCAACATGGGATCACTATTGATCTTGGACGTATCAAAAATCCGAACA
AAAACCCGGTAGCTGAGAGAGCCGTTCAAGAACTTGAGGAAGAGCTTTTG
CGAATCAATCCATCCGGTAAAGCCGTTTCATTCTCCGAGCTATCATTGGC
TGTAAACACCATCAATTCACGAATACGCAACCGAGGACTCTCAGCCAAAG
AAATCTTGTTCCGTCGCGATCAGATCACTGGAGAAAGTCTTGATATTGAC
GACAACCATCTCAGTAACCAACAAAAGGAATACCGTCATCGTAATCACGC
TGCTAGTGCCCTTTCGAAAATCAAGGGACATCCAATAAAGTTACCAACAA
AATCCATCCATGTTGGAGATCTTGTCTATATTAAGAACGATAAAGACAAG
TTCAAAGCGCGTGAACGTTATATAGTGATGCAAATCAGAAATAGTGTCGC
TATAATCCAGAAGATCAACGGTTCCTCATTTATGTCGAGACGGTACGAGG
TGCCTTTAACATCAATCTACCCAGTCCAGCCTGAAGAAATATCTTTCCGT
CCACAAAATCCGACCATCGAAAGCGAATCCGATGAAGACGAAGACGAAGA
TGAAGACGTATCACCATCCGATAATGATGACATCGCAATCGAGAACGAAG
CCCCGGTCGCTGCTCGACCACAACGTAATCGACGTGAGCCTCGTTGGCTC
CTGGACGATATCTGGGACCGATCATGAGTCCATCACCGTTGTATATATTG
AACTTGATATGAGTTATTGTTTCATTTCTTGATGCCAATCCATTGCTATA
TGGGCATTGAGTTATTACTTACTGGCGTTATTTTTTGCTGGTATTTGGTT
ATGTTCACTGAAATTGAGTTATTGTTATATGCTTGTATTGAGTTATTATT
GTTTCACTGGCATCAAGTTATTGTTGAGCTATTATTATTTGCTGGTATTG
AAATTATGTTTCATTTGCTGGCATTGAATTGATGTTATATTTGCTGGCAT
CATGTTGATATTATATTTACTGGTTATTGCTATTGGTACAATGGTTTTGT
TATTGAGACATGTTATATGGTTTGTTGATTATTGATACTTACACTATGTC
AGCATAGGCTGAGTGGAAAGTGACCACGCCA

Coding sequence (CDS) from alignment at sc0001355:48895..56275-

>TCONS_00035739 ID=TCONS_00035739|Name=TCONS_00035739|organism=Clytia hemisphaerica|type=CDS|length=5682bp|location=Sequence derived from alignment at sc0001355:48895..56275- (Clytia hemisphaerica)
ACTTCTCACCGTACATCCGCGAATCCAAAAACCCTTTACAACTTCTTTCG
GACAATAAGCCGTGTGTCCAGGCATTTGCCAAGTTGAATGGCTAGCTTTA
AACCACCAAAGCAATGGGTGTTAACTGAACAAGAGACAATCACTTCCTTT
GCAAGTTGGCAAAGCAATATTATTTACCATCTGAGTCTGAACAATGAATT
TGCTCAGTTCATCGAACCGACTGCTGCTTGGCAAAAGCAATCCGTTACAA
ACAGGGGTCTCGCCAACGACCCAAATACAGTCCCAGAAAACCGCAGACGA
ACCGCTTTGCAAAAGAACATACTCCTTGATCAAATGCTGGGACTAATAGC
ACAATTCTCGCCTTCATTATTACGCTCGGACATCATCAAACGTAGCACCA
GTCTTCAATGGATATGGCAGAGAATCAGAAAGCACTACTCATTTTGCCAG
TCTGAAGTTAACTTTTTAAAACTTTCGACTATCAAACGCCAAGAAGGAGA
AAGATTTGAGACATTATTCCAAAGAATCGTTGCCCATATTGAGGACAATT
TACTAACAACAGAATCAGGGTTAACGCATGACGGAGCCCTGGTAACAGAA
AACGAAGAAATGTCCCCAACCACTGAGAGACTAGCCGTATATCTATGGCT
AAATTTGATTGACGAGCGTCTTCCATCTTATGTCGCTAGAGTATTTGCTC
ACGATCTACAATCACGCTCGCTAAAGGATATCCAACCACAGATATGTGCG
GCAATGGACTCCTTACTTACCGAATTAAATGTCCAAGAGGATATTCAAGT
CAACTACTCACGCTCGAGCTACAACAATCGCCGTTATCCTGGAAAACCAA
GTCAACGAAATTCACATCCTCAAAAATCACATCAAAAGTCGAAAACCTGC
ATTCTGTGTAAGGCTGCAAGTCGACCCTACCAAGGACATGATGTTTCCAC
ATGCTGGTTCATCAGTAAATTTGACAAGAAGGAGATCGCAAGCGCACTAG
CTGTTGAAGTAGATCCTGGTAACGATCTTGAAGATCCTCTAGATCACAGT
GACGTCAAATCGTGTACATCAGCGCCTCCACCCGACAAACTCGAACAAGG
TACATCCATCGCTCGAGTTCAATCCAACTCATCGCCATTCTTCTACGCGT
TTCTGAAACACCATACATGTCGCGTAGTTATTGACACGGGCGCCACATCC
TCGTTAGTTTCTGCTGATTTTATCGCAAGAGCAGGGATCAAACTAACTCC
TACATCTCATGCTGCTCGTCAAATTGATAAGACTCCTCTCAACCTCCTCG
GCGAAGCAAAGTTTAAATTATTTTTTGGCGATTATGAACTTCCTATTGAG
GCATTAGTGACTGAATCATTAGATTGCGACATCCTTGCAGGTGTCCCTTT
CTGCAAGTCTAACAACATCGACGTGCATCTTGGTACAGAAGAGATCTCGT
TAAACCAGAAACGCATACCGTATGGTTCAAGACCCAATTCCATTCAACAC
GACATCTACCGAGTCCAATCAACTGTTTTACGAAATGATTCCACATCCGT
TGTGTACCCAGGAGAATTCCTTGAGATTCATAACCAAGCAATTTCACATT
ACGAAGGTGAGGTTGCTATCGAACCTAGAACTGACTCGCCAGCCAATGGT
AATTGGCCACCACCTACTATCTCTCGTGTGATTAATGGAACGGTCAGAAT
TCCAAACGAAACGAACTCTCCTGTCTATGTATCCAAGTCACAACACATTG
CAACTATACGACGTGTCACAACACCAACACCGCCAACACCTTTTCATCAG
TCTGAAGTCATCTCTCCAGCTTCTAAACAACTGATCACAGACTGCAAACC
GAAATCCATCCTTTTTTCCAGCAATATCTTAGTCGATCCTGACAGTCAAT
TGACACCTAGTGAGAAGGGACAATTTCTCCAACTACATAAAGACTACGAC
AATGTCTTTAACCCACAATTCGGTGTCTATAACGACAACAGTGGAAGAAT
ACGTGCCAAACTCAATTTCGGTAATGTTGACCCTCCTCCACGAAAACCAA
AGTTACCGTTCTACAACCACACTCAGTTACAACAACTACAGGAGGAAGCC
GATAAGTTGGAAGCCCTGGGAGTACTCGCAAAACCTGAAGACGTGGGTGT
CGACGTACAGTTTGCTTCTCCAAGTCTACTCGTAAAGAAACCAGACGGCT
CCTTTCGATTCTGCACTGCTTTCAACGAATTGTGTCAGTACACGAAAGTC
TTACCTGTCGCTTCTCAAAGCTGCGATGACGTCCTACGCCGTTTGTCATC
GTGGAAGTACTTAATCAAGACCGACCTCACCAAAAGTTTCTTTCAAATTC
CTTTAGATTCCGCTTCCGTACCGTATCTAGGAACAGTAACACCGTTTAAA
GGACTGCGTATCTACCTTCGTTCCGCTATGGGTATGCCAGGCTCTTCGGA
ACATTTGCAAGAACTGACATCCCGTGTTCTTGGTGATTTTATCCAAGAAG
GATTTGTTACTGTCCTTGCCGACGACCTTCACGTTGGAGGAAACACTATC
CAAGAGACATTTATTAATTGGTCCCGCGTACTCCATCGATTGAGAGAGAA
CAACCTTACTCTCTCGGCCAGTAAAACCGTAATCTGCCCCAAATCTACCA
CCGTGCTTGGATGGAGATGGACATCCGGACAGCTGTCTGTCACTCCTCAC
AAGATCTCGCCTTTGGTTGCATCAGCACCACCCACAACGTGCACTGCTAT
GCGTTCTTATATCGGTGCATACAAAGCAATCGCTAGATGTATCCCTCGAC
ACTCATCGCTGTTATCGCCACTAGAAGCAATCATCAAAAACACTTCTCAC
CGTACATCCGCGAATCCAAAAACCCTTTACAACTTCTTTCGGACAATAAG
CCGTGTGTCCAGGCATTTGCCAAGTTGAATGGCTAGCTTTAAACCACCAA
AGCAATGGGTGTTAACTGAACAAGAGACAATCACTTCCTTTGCAAGTTGG
CAAAGCAATATTATTTACCATCTGAGTCTGAACAATGAATTTGCTCAGTT
CATCGAACCGACTGCTGCTTGGCAAAAGCAATCCGTTACAAACAGGGGTC
TCGCCAACGACCCAAATACAGTCCCAGAAAACCGCAGACGAACCGCTTTG
CAAAAGAACATACTCCTTGATCAAATGCTGGGACTAATAGCACAATTCTC
GCCTTCATTATTACGCTCGGACATCATCAAACGTAGCACCAGTCTTCAAT
GGATATGGCAGAGAATCAGAAAGCACTACTCATTTTGCCAGTCTGAAGTT
AACTTTTTAAAACTTTCGACTATCAAACGCCAAGAAGGAGAAAGATTTGA
GACATTATTCCAAAGAATCGTTGCCCATATTGAGGACAATTTACTAACAA
CAGAATCAGGGTTAACGCATGACGGAGCCCTGGTAACAGAAAACGAAGAA
ATGTCCCCAACCACTGAGAGACTAGCCGTATATCTATGGCTAAATTTGAT
TGACGAGCGTCTTCCATCTTATGTCGCTAGAGTATTTGCTCACGATCTAC
AATCACGCTCGCTAAAGGATATCCAACCACAGATATGTGCGGCAATGGAC
TCCTTACTTACCGAATTAAATGTCCAAGAGGATATTCAAGTCAACTACTC
ACGCTCGAGCTACAACAATCGCCGTTATCCTGGAAAACCAAGTCAACGAA
ATTCACATCCTCAAAAATCACATCAAAAGTCGAAAACCTGCATTCTGTGT
AAGGCTGCAAGTCGACCCTACCAAGGACATGATGTTTCCACATGCTGGTT
CATCAGTAAATTTGACAAGAAGGAGATCGCAAGCGCACTAGCTGTTGAAG
TAGATCCTGGTAACGATCTTGAAGATCCTCTAGATCACAGTGACGTCAAA
TCGTGTACATCAGCGCCTCCACCCGACAAACTCGAACAAGGTACATCCAT
CGCTCGAGTTCAATCCAACTCATCGCCATTCTTCTACGCGTTTCTGAAAC
ACCATACATGTCGCGTAGTTATTGACACGGGCGCCACATCCTCGTTAGTT
TCTGCTGATTTTATCGCAAGAGCAGGGATCAAACTAACTCCTACATCTCA
TGCTGCTCGTCAAATTGATAAGACTCCTCTCAACCTCCTCGGCGAAGCAA
AGTTTAAATTATTTTTTGGCGATTATGAACTTCCTATTGAGGCATTAGTG
ACTGAATCATTAGATTGCGACATCCTTGCAGGTGTCCCTTTCTGCAAGTC
TAACAACATCGACGTGCATCTTGGTACAGAAGAGATCTCGTTAAACCAGA
AACGCATACCGTATGGTTCAAGACCCAATTCCATTCAACACGACATCTAC
CGAGTCCAATCAACTGTTTTACGAAATGATTCCACATCCGTTGTGTACCC
AGGAGAATTCCTTGAGATTCATAACCAAGCAATTTCACATTACGAAGGTG
AGGTTGCTATCGAACCTAGAACTGACTCGCCAGCCAATGGTAATTGGCCA
CCACCTACTATCTCTCGTGTGATTAATGGAACGGTCAGAATTCCAAACGA
AACGAACTCTCCTGTCTATGTATCCAAGTCACAACACATTGCAACTATAC
GACGTGTCACAACACCAACACCGCCAACACCTTTTCATCAGTCTGAAGTC
ATCTCTCCAGCTTCTAAACAACTGATCACAGACTGCAAACCGAAATCCAT
CCTTTTTTCCAGCAATATCTTAGTCGATCCTGACAGTCAATTGACACCTA
GTGAGAAGGGACAATTTCTCCAACTACATAAAGACTACGACAATGTCTTT
AACCCACAATTCGGTGTCTATAACGACAACAGTGGAAGAATACGTGCCAA
ACTCAATTTCGGTAATGTTGACCCTCCTCCACGAAAACCAAAGTTACCGT
TCTACAACCACACTCAGTTACAACAACTACAGGAGGAAGCCGATAAGTTG
GAAGCCCTGGGAGTACTCGCAAAACCTGAAGACGTGGGTGTCGACGTACA
GTTTGCTTCTCCAAGTCTACTCGTAAAGAAACCAGACGGCTCCTTTCGAT
TCTGCACTGCTTTCAACGAATTGTGTCAGTACACGAAAGTCTTACCTGTC
GCTTCTCAAAGCTGCGATGACGTCCTACGCCGTTTGTCATCGTGGAAGTA
CTTAATCAAGACCGACCTCACCAAAAGTTTCTTTCAAATTCCTTTAGATT
CCGCTTCCGTACCGTATCTAGGAACAGTAACACCGTTTAAAGGACTGCGT
ATCTACCTTCGTTCCGCTATGGGTATGCCAGGCTCTTCGGAACATTTGCA
AGAACTGACATCCCGTGTTCTTGGTGATTTTATCCAAGAAGGATTTGTTA
CTGTCCTTGCCGACGACCTTCACGTTGGAGGAAACACTATCCAAGAGACA
TTTATTAATTGGTCCCGCGTACTCCATCGATTGAGAGAGAACAACCTTAC
TCTCTCGGCCAGTAAAACCGTAATCTGCCCCAAATCTACCACCGTGCTTG
GATGGAGATGGACATCCGGACAGCTGTCTGTCACTCCTCACAAGATCTCG
CCTTTGGTTGCATCAGCACCACCCACAACGTGCACTGCTATGCGTTCTTA
TATCGGTGCATACAAAGCAATCGCTAGATGTATCCCTCGACACTCATCGC
TGTTATCGCCACTAGAAGCAATCATCAAAAAC

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_020956	XLOC_020956	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00035739-protein	TCONS_00035739-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00035739-exon-sc0001355-1575043694:51303..56275	TCONS_00035739-exon-sc0001355-1575043694:51303..56275	Clytia hemisphaerica	exon
TCONS_00035739-exon-sc0001355-1575043694:48895..51013	TCONS_00035739-exon-sc0001355-1575043694:48895..51013	Clytia hemisphaerica	exon
TCONS_00035739-exon-sc0001355-1510915933:51303..56275	TCONS_00035739-exon-sc0001355-1510915933:51303..56275	Clytia hemisphaerica	exon
TCONS_00035739-exon-sc0001355-1510915933:48895..51013	TCONS_00035739-exon-sc0001355-1510915933:48895..51013	Clytia hemisphaerica	exon
TCONS_00035739-exon-sc0001355-1491911889:51303..56275	TCONS_00035739-exon-sc0001355-1491911889:51303..56275	Clytia hemisphaerica	exon
TCONS_00035739-exon-sc0001355-1491911889:48895..51013	TCONS_00035739-exon-sc0001355-1491911889:48895..51013	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001355	supercontig	sc0001355:48895..56275 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.131131	0.148897	0.344411	0.418275	1.8522e-10	0.194679	9.62165e-07	5.81917e-08	0	0.00769272	0.000837318	0	0.000140183	0	0.0809998	0	0.226059	0.0595782	0.0423797	0.015772	0.184261	0.198721	0	0.15763	3.88858e-06	4.04103e-09	0.11512	0.161499	0.0639934	0.035617

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR021109	Peptidase_aspartic_dom
IPR000477	RT_dom

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00035739 vs. Swiss-Prot (Human)

BLAST of TCONS_00035739 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00035739 (transcript) - C. hemisphaerica