TCONS_00035721 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035721
Unique NameTCONS_00035721
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1182

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035721 ID=TCONS_00035721|Name=TCONS_00035721|organism=Clytia hemisphaerica|type=transcript|length=1182bp
GTGTTTCTAAAGCCCGTTTTTagattatatttcaaaatagttCTATAATA
GTTGTATGTAGTGGTAGTAAGCCTTTGGATTGAgtattgaattttttatc
aaaatctatGTCAATTGTTAAGATGTCTTACAGGACTAGGAAGAGATGTT
ATTCTAGCAATAAATAGATGTCAGATTATTTATTACACGAGCTTGCAGGT
CTAGGTGACTGGAAACAAATCGAAGTATTATTTCGAATCAATGCAGTAAA
AGATGTAAATTTACAAGATGATGAATTTGAAGGCCAAACTCCATTACATT
GGGCAGTCAGAAAAGGAAAATTAAAGTGTTGTAAACTTTTATTGGAACAT
CATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGACTCATTG
TGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATGATCATT
TTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAAGATATA
GCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGATGTTGA
GAATGGACGTACAAAACGAAGAAGCATCGAAGAAAAGATAGAAGAAAAAT
CTCTCCCACTCATAATCTCTAATGAAATCACAAACGAAAGACCCAAAACA
GCAAATCCTCCGTAAAAAACTGAAACTCACTATAAAGAGAAGATGGAAAA
CAACTATCTTGAGACATGTGGACCTGATTAGGCTACattaacaaaatttt
gaaacatctcaattTAATGGCCACGCAGTTGAATCAGCCAAGTGGGAATG
GGTGATAAGGATTGAAGTGAATCTCCTGTTTAGGATTTGGATTGAAAAAA
GGTGGAGATGCTCTATAATCATTCGAAAATCCTGATGAAAAGTTATCCCA
TTGGGCAGAAAATGGATTTGAGCTGTAAAAGCTTAAAATGAAAAGACATC
TAGGATTGGAAAATGGATACAACATCAAAATGGCGTGCGACGTTGAGTAC
AAAACAAAGTTTTCGATTTTAAAATAGCATCTCCAAAAGATGAAAACTGA
CAAGTCAATcttcaaataaaataatttgattacctgttctgtaatttttt
gtaattttctgtACGTGGAAGTgtttaataatttaaaattatcgggaatt
ttaaagaaataactTGGATACCTTCTGGaact
Run BLAST on NCBI

protein sequence of TCONS_00035721-protein

>TCONS_00035721-protein ID=TCONS_00035721-protein|Name=TCONS_00035721-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MSDYLLHELAGLGDWKQIEVLFRINAVKDVNLQDDEFEGQTPLHWAVRKG
KLKCCKLLLEHHADVSIKMHQGWTVTHCAAENGHLEILRLLYDHFAPMFD
RDDFNATPKDIARVYGHKDCYQFLDDVENGRTKRRSIEEKIEEKSLPLII
SNEITNERPKTANPP
Run BLAST on NCBI

transcript from alignment at sc0001354:42726..49175-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035721 ID=TCONS_00035721|Name=TCONS_00035721|organism=Clytia hemisphaerica|type=transcript|length=6450bp|location=Sequence derived from alignment at sc0001354:42726..49175- (Clytia hemisphaerica)
GTGTTTCTAAAGCCCGTTTTTAGATTATATTTCAAAATAGTTCTATAATA
GTTGTATGTAGTGGTAGTAAGCCTTTGGATTGAGTATTGAATTTTTTATC
AAAATCTATGTCAATTGTTAAGATGTCTTACAGGACTAGGAAGTGTGTGA
ATTAAGCTACGAATTATTTAATGGCTAGTAGTAGTAAAGTTCATCTGACA
AGAAGCCTTTTGAAAAATCTTATACGCGTTTTTTTTAAACAAGAACAAAC
CATACAATAAGAACAATAAGAACATAAAGCTTCGATGGCCAAAATGTTAA
CAGGTTAAGAACATTTAAAGGATCTGCGGACTTAAAACACAGGAATAATG
GACTAAAATACTCACAAAATGGTAAAATTAAGTACATGTTAAGAACAGTT
TTAGATGGTGACATTAAGAGCATTTTGAGAATATTTTTTGGCTTGAAACT
CAAAAAGTTAAGAACATCAGCAGACTTCAAAATTTTTGGATGTTCTTATA
AGAAAACGTGTANTATTGAAATATTTTATTATCAAAAAAAGCTTAGTAGA
CTATATTGTTTTATATATTATGAAATGTATTTATCATTTTTCTGTTATTG
TCCCACTTTTTGAAGGGCCTCTTCCAATCTCATTAGTATATTTGCTGTTG
CTACAACGACCTCACTCATGAAATAGATTTGGTTTTAACATTCTCAGATT
ACTCTTTTCTAAAAAGTACAGTTTGAAAAATAAATGTTTAACTTGGTGTG
TTGTTTTTATGAAGTGTTTCTAAAGCCCGTTTTTAGATTATATTTCAAAA
TAGTTCTATTATAGTTAGTTGTATCTTGTCACAGTAAAACCAATTTTCTC
CGTCTATGCGAGAGTGTATAGAATATAACGTAGTCAGAAATAACACATCA
TCTTTCTAATGAATATTTCGGCCAACTGGCCTTTTTCAACATAAAAGTTA
GTTGTATGTACATAGTGGTTATACTGTAAAGCTTTGGATTGAGCATTGAA
TTTTTTATCAAAATCTATGTCAATTGTTAAGACGTCTTATATACAATGGG
ACTAGGCAATATATTGAATTGAGCTACGAATTATTTAATGGCTCATAAAG
TTCATCTGACAGGAATGAGCCTTTTGAAAAATCTTATACACGTTTTTTTT
ATACAAGAACAAACCATACAATAAGGACAATAAGAACATAAGGCTTCGAT
GGCCAAAATGTTAAGAACAAGTTAAGAACATTTAAAGGCTCTGCGGACTT
AAAACACAGGAATAATGGACTAAAATACTCACAAAATGGTAAAATTAAGA
ACATGTCAAGAACAGTTTTAGATGGTGACATTAAGAGTATTTTGAGAATA
TTTTTTGGCTTGAAACTCAAAAAGTTAAGAACATCAGCAGACTTCAAAAT
TTTTGGATGTTCTTATAAGAAAACGTGTATCTTTATCTTATTTATTTATT
GGATTATTATTTTTGCCAGGATATTTTTAGAATATATTTTTGTATATTGG
GAAGATTTCCAGCTCGCTTTTGGAAATTAAAAGATATTTACAGGTGCTAA
TTTATTTCATTTTTACAAAATCATACTACCGGGTGCACCAAAAAAAAGTA
TACAGGTTTGTCGAGATATTGCGAGCTTCAGGATTTTAAATTTTTTGTTC
ATTCTTTTTTTATCGAATAGAGGATATGCTCTAAATTGAATTTTGAGCTA
TCAAACATTAGGTTTGAAAAAATAGTTCGAAAATTATTTCAAAAAAACTN
TCGAATAGAGGATATGCTCTAAATTGAATTTTGAGCTATCAAACATTAGG
TTTGAAAAAATAGTTCGAAAATTATTTCAAAAAAACTGACTTTTTTTTAA
GTCAAAATTTCAAAAAATCATCAAAAACAGCGAACAAACTTTCTCTTGAC
ACTTACCTTCTTTACACATAAAAATACCAAAAAATGCAACTCTGTTCATC
AAAACTCGTTACAGAAATTTAAACACCCCTGTCTCAGTGCCCCGGTGGCA
TGATTTCAGTACATGATTTTTTTCAGTACATGGTTTCAGTACATGATTTT
TTCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATACTACCGGGTGCACC
AAAAAAAAGTATACAGGTTTGTCGAGATATTGCGAGCTTCAGGATTTTAA
ATTTTTTGTTCATTCTTTTTTTACCGAATAGAGGATATGCTCTAAATTGA
ATTTTGAGCTATCATACATTAGGTTTGAAAAAATAGTTCGAAAATTATTT
CAAAAAAACTGACTTTTTTTTAAGTCAAAATTTCAAAAGTTCATCAAAAC
TCGTTACAGAAATTTAAAAATATAGCAGAACAAGCTATTCCCATGTGGGA
TAAAAAGGTTTTGGAAATCTCCAAGAGAGGTTTTGATGTTATGTGTGTGA
TATGTGAGAAAACTTTTGAAAAAATATATCACCATTCCTCAACTAGTTGC
TCAAAGAACTTGGGTCTGCATTGAGTTTGCTCGTGTTGTAAATATCTCAA
ATATCTATGACGTACAAATAAGATGGAGAAACTGTTGGCAAAATATAAAT
CAAGAAAAAAAAATTTAAAAAACCCAATAAAATTGTGTTCTTGTCATTTT
GTCTTATTTATAGCGTGATTGCTGTTTTTAATAATATTTTGAAATGTCGA
CTCAAATTTAATGTACGATAGCTCAAAATTCAAGTTAGAGCATCCTCTAT
ACGATAAAAAAAGAATGAACAAAAAATTTAACCCTGAAGCTCACTATATC
TTGACAAGCCCAATAAAGATTTTATCTGTATACTTTTTTATGGTGCACCC
GGTATATTTTATGCAACTATGAAATATATGTTATATACAATGATCGAGAA
ATAATGGATATAATAAAATGGATTTTAAATTTATAAAGAAATTTGTATAT
TTTTCGAGCCCGTCCAATTCAAAATTATAATTATTATAATGATCAACATT
AAACAAATTATAAACTGTATGTGAAGTATAATTGGATGATTAAGCGTTAA
TTAAAAAGGTGTAGTCATGTGTGTTTTCATGTATAAATATTGATGAATAA
GTGACAAAAAAAAAACGTTTGTGCTTTAGTGTAGTAGACATATTTTTATA
AGAACACAATGCTTCGATGCGCAAAATGTTAAGAACTATAGTTAAAAACA
TTTCAAAGCTTCGCAGATTCTAAAACGCCTAATTCTTTAGTAACATGGAC
AAAAATACTTTCAAAAAGAGGAAAATAAGAACACGTGAAAAATATTTTTA
GGCTTAAAAATAAAAAGTTAAGTCCTATAAAAAACGTGCAACTGGCCAAT
TATACATGTCTAGTTCTAACAATTCCTTTTCGAAAACATTGATGTGAAAT
GAAAATAAGAATCAAAACTTTCATATTTTGTCCTTTTTTCAGGAGATGTT
ATTCTAGCAATAAATAGATGTCAGATTATTTATTACACGAGCTTGCAGGT
CTAGGTGACTGGAAACAAATCGAAGTATTATTTCGAATCAATGCAGTAAA
AGATGTAAATTTACAAGATGATGAATTTGAAGGCCAAACTCCATTACATT
GGGCAGTCAGAAAAGGTATGGATAAAATATTTTTGCAGAGTTCAGATCCA
ATTTTTGCAGATCCAATCTCCAAGGCGATACTCCTGGTTCTACTAATTTT
GGGAAGCTAGTGTGCGATATTGAAGGCTCCTTTTTCGAAAACTATTCACT
CTAAGGTAGCAGATGGCGCTTTTTCTTCCTGAATTACTATTTTAGCCAAT
TTCTGCCCAAATCATTCCTTTATTTTAGCAAGAAAGTGTATCCCATGTTA
CTAATTAATTTGCAGAATAATATAGCTGAGAGATTAGAAACTCATTCCAG
GGATATGTTATAGCGGAGCTGGATGAAGGACGAGAATTCCTTAGCGGATT
GCTCCTTTGTCTTTTCTATTGTAAACTGTTCATAATAGAAATCCATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAAAGTA
TTCATGCAGTACGTTTGCATATATTTTGCTATGATGTTCCCGCTTTTCAT
CAAAATAATATTTGCAAAAGATACCCCAAAAGCTTCTTTGTAAATGAAGT
CTAATTTTATCAGCGTGTGTTATAAATTTGAAGCTTTCACGATTTTTTCT
TCAAAAATTTCGGATGTAAATATTTTGACAAATATTGTTTCAATTGACTT
GAAATTTTTTACCATACACGTTTTTTTTTATATAAGAACAAACTATATAA
GAACATAAGGCTTCGAGCCCAAAATTTTAAGAACATTCTAAGAACATACT
AAGGCTTTGGAGACTTAAAAACATGCAATTTCTTAAGAAATTACATCAAA
ATGCTCAAAAAATGCTGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTAAAAAAGTTTAATTTCATATCAAATT
TTAATGTCAGGGACAGAGATAGAACAAGGCTTTTTCAAATGTGCGTTATC
CAGCTCCGCTATAACATATCCCTGCTCATTCTAGTAGAAACAAAAATTAT
GTTTAAACTTTTTAGGAAAATTAAAGTGTTGTAAACTTTTATTGGAACAT
CATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGACTCATTG
TGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATGATCATT
TTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAAGATATA
GCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGAGTAAGT
TATCTTTTTGTCTAATCTAAGTTCTCCTTTTCTCCTATTGAAGAGAAATA
ATAAGTTTATGGGCAGTACATTGCAGGAAATGCTTTAAAATGTAGACGTA
CAAATAAAAACTCTAAATTCCATTCGCTTTGAGTGTTATTCTTATTATTC
TGCTCCATGTTCCAAAAGCTTTAAAATACCAAAAGTGAAATATCTAGTAT
TAAAGTAGAGTTAATTTTTTCCTCTGCATTTCTGCATTTTCCCCAAGATT
ACAGCTGAATTATCTTTTCAACTGCCTTTAAATTGTTACAATCGAATCAT
TCGTACAAGAAAACGGCAAGTAAAACAAGCATTTAACCTCCTACAGACTA
TTTCTGGAATAGCCCAATGTTGAAAAAAGGATTTTTTTATTGTTGGTCAA
ACGTCCTCAATTTTTTAACAATGTATGTTGGTATGTTATCTGGATTCTTT
TTAATTCTTCAGTGTTGAGAATGGACGTACAAAACGAAGAAGCATCGAAG
AAAAGATAGAAGAAAAATCTCTCCCACTCATAATCTCTAATGAAATCACA
AACGAAAGACCCAAAACAGCAAATCCTCCGTAAAAAACTGAAACTCACTA
TAAAGAGAAGATGGAAAACAACTATCTTGAGACATGTGGACCTGATTAGG
CTACATTAACAAAATTTTGAAACATCTCAATTTAATGGCCACGCAGTTGA
ATCAGCCAAGTGGGAATGGGTGATAAGGATTGAAGTGAATCTCCTGTTTA
GGATTTGGATTGAAAAAAGGTGGAGATGCTCTATAATCATTCGAAAATCC
TGATGAAAAGTTATCCCATTGGGCAGAAAATGGATTTGAGCTGTAAAAGC
TTAAAATGAAAAGACATCTAGGATTGGAAAATGGATACAACATCAAAATG
GCGTGCGACGTTGAGTACAAAACAAAGTTTTCGATTTTAAAATAGCATCT
CCAAAAGATGAAAACTGACAAGTCAATCTTCAAATAAAATAATTTGATTA
CCTGTTCTGTAATTTTTTGTAATTTTCTGTACGTGGAAGTGTTTAATAAT
TTAAAATTATCGGGAATTTTAAAGAAATAACTTGGATACCTTCTGGAACT

Coding sequence (CDS) from alignment at sc0001354:42726..49175-

>TCONS_00035721 ID=TCONS_00035721|Name=TCONS_00035721|organism=Clytia hemisphaerica|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0001354:42726..49175- (Clytia hemisphaerica)
TGTTGAGAATGGACGTACAAAACGAAGAAGCATCGAAGAAAAGATAGAAG
AAAAATCTCTCCCACTCATAATCTCTAATGAAATCACAAACGAAAGACCC
AAAACAGCAAATCCTCCGTAAGAAAATTAAAGTGTTGTAAACTTTTATTG
GAACATCATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGAC
TCATTGTGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATG
ATCATTTTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAA
GATATAGCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGA
ATGTCAGATTATTTATTACACGAGCTTGCAGGTCTAGGTGACTGGAAACA
AATCGAAGTATTATTTCGAATCAATGCAGTAAAAGATGTAAATTTACAAG
ATGATGAATTTGAAGGCCAAACTCCATTACATTGGGCAGTCAGAAAAGTG
TTGAGAATGGACGTACAAAACGAAGAAGCATCGAAGAAAAGATAGAAGAA
AAATCTCTCCCACTCATAATCTCTAATGAAATCACAAACGAAAGACCCAA
AACAGCAAATCCTCCGTAAGAAAATTAAAGTGTTGTAAACTTTTATTGGA
ACATCATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGACTC
ATTGTGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATGAT
CATTTTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAAGA
TATAGCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGAAT
GTCAGATTATTTATTACACGAGCTTGCAGGTCTAGGTGACTGGAAACAAA
TCGAAGTATTATTTCGAATCAATGCAGTAAAAGATGTAAATTTACAAGAT
GATGAATTTGAAGGCCAAACTCCATTACATTGGGCAGTCAGAAAAGTGTT
GAGAATGGACGTACAAAACGAAGAAGCATCGAAGAAAAGATAGAAGAAAA
ATCTCTCCCACTCATAATCTCTAATGAAATCACAAACGAAAGACCCAAAA
CAGCAAATCCTCCGTAAGAAAATTAAAGTGTTGTAAACTTTTATTGGAAC
ATCATGCAGATGTTAGTATCAAGATGCATCAAGGATGGACAGTGACTCAT
TGTGCGGCGGAAAACGGTCATTTGGAGATCTTGCGGTTATTATATGATCA
TTTTGCACCGATGTTTGACAGAGATGACTTCAATGCTACACCAAAAGATA
TAGCAAGAGTTTATGGACATAAAGACTGCTACCAATTTCTAGATGAATGT
CAGATTATTTATTACACGAGCTTGCAGGTCTAGGTGACTGGAAACAAATC
GAAGTATTATTTCGAATCAATGCAGTAAAAGATGTAAATTTACAAGATGA
TGAATTTGAAGGCCAAACTCCATTACATTGGGCAGTCAGAAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020944XLOC_020944Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035721-proteinTCONS_00035721-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035721-exon-sc0001354-1575043694:49034..49175TCONS_00035721-exon-sc0001354-1575043694:49034..49175Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1575043694:45511..45683TCONS_00035721-exon-sc0001354-1575043694:45511..45683Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1575043694:43832..44060TCONS_00035721-exon-sc0001354-1575043694:43832..44060Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1575043694:42726..43363TCONS_00035721-exon-sc0001354-1575043694:42726..43363Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1510915933:49034..49175TCONS_00035721-exon-sc0001354-1510915933:49034..49175Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1510915933:45511..45683TCONS_00035721-exon-sc0001354-1510915933:45511..45683Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1510915933:43832..44060TCONS_00035721-exon-sc0001354-1510915933:43832..44060Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1510915933:42726..43363TCONS_00035721-exon-sc0001354-1510915933:42726..43363Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1491911889:49034..49175TCONS_00035721-exon-sc0001354-1491911889:49034..49175Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1491911889:45511..45683TCONS_00035721-exon-sc0001354-1491911889:45511..45683Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1491911889:43832..44060TCONS_00035721-exon-sc0001354-1491911889:43832..44060Clytia hemisphaericaexon
TCONS_00035721-exon-sc0001354-1491911889:42726..43363TCONS_00035721-exon-sc0001354-1491911889:42726..43363Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001354supercontigsc0001354:42726..49175 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.247847	0.0899606	0.0772894	0.486146	2.36756	4.74331	5.28821	1.31705	0	1.19297	2.40231	4.3843	5.19352	2.36358	2.81577	3.67187	1.22218	15.9843	13.826	9.53452	6.51157	3.61053	3.69894	5.97442	6.53674	42.4653	40.663	9.55872	6.92986
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
[Close]
BLAST of TCONS_00035721 vs. Swiss-Prot (Human)
Match: ANR66 (Ankyrin repeat domain-containing protein 66 OS=Homo sapiens GN=ANKRD66 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 8.735e-18
Identity = 56/162 (34.57%), Postives = 85/162 (52.47%), Query Frame = 3 
Query:   66 SKPLD*VLNFLSKSMSIVKMSYRTRKRCYSSNK*MSDYLLHELAGLGDWKQIEVLFRINAVKDVNLQDDEFEGQTPLHWAVRXXXXXXXXXXXEHHADVSIKMHQGWTVTHCAAENGHLEILRLLYDHFAPMFDRDDFNATPKDIARVYGHKDCYQFLDDVE 551
            + PL  V + L  +M + KMS  T+              LH+    GD+  ++ + +   + D N +D ++  +TPLHWA  KG+++  +LL+E+ A   +    GWT  H AAE GHL IL+ L+   A +   D F  TPK IA++YG K C  FL+  E
Sbjct:   42 AGPLPRVSDSLFSAMELAKMSDMTK--------------LHQAVAAGDYSLVKKILK-KGLCDPNYKDVDWNDRTPLHWAAIKGQMEVIRLLIEYGARPCLVTSVGWTPAHFAAEAGHLNILKTLHALHAAIDAPDFFGDTPKRIAQIYGQKACVAFLEKAE 188
The following BLAST results are available for this feature:
BLAST of TCONS_00035721 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ANR668.735e-1834.57Ankyrin repeat domain-containing protein 66 OS=Hom... [more]
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