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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035528 ID=TCONS_00035528|Name=TCONS_00035528|organism=Clytia hemisphaerica|type=transcript|length=599bp
TGCTCCAGGTCATGCCTAATGATTGTACTTTTTGTTAATAAGAatcatat
ttgtttttctttttgtacagtTTTGGACCATCTATCATCCATATACATCA
AGACTGTTATCGTACATCATATCCAGACTGATTGGTTCCCACTGATTGAT
TGATACACAATCTTAAGggtGCATCAAGTCCACATCATTCAGTGTATAGC
TACTCTGGTCAATCTGGATTTACATTAGATAGCTTGGTTATAAAAAGCTA
ACTTGGATTTACACAGTTAACTCAGATTTAAAGGATTCCCCTCTATTCAC
TTGGCTCACCAGAATACACTTGGAATACTTTGTTTTATTTGGTTTTACAC
GGCTCaattgatattactcggctcacttgatattactcggctcatttgat
attactcggctcacttgatattactcggctcacttgatatttCTTGcctc
acttgatattactcggctcacttgatttaatcggctcacttgatattact
cggctcacttgatactattcggctaacttgatattactcggctaacttga
tattactcggctaacttgatattactcggctaacttgaCACTACTCGGC Run BLAST on NCBI transcript from alignment at sc0001327:55085..56485- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035528 ID=TCONS_00035528|Name=TCONS_00035528|organism=Clytia hemisphaerica|type=transcript|length=1401bp|location=Sequence derived from alignment at sc0001327:55085..56485- (Clytia hemisphaerica)
TGCTCCAGGTCATGCCTAATGATTGTACTTTTTGTTAATAAGAATCATAT
TTGTTTTTCTTTTTGTACAGTTTTGGACCATCTATCATCCATATACATCA
AGACTGTTATCGTACATCATATCCAGACTGATTGGTTCCCACTGATTGAT
TGATACACAATCTTAAGGTGAGTTTGAATTTGATTTTCTTCAGGATTTAT
CATTAAAAGGCTTTGGTAACCTAATGACTTAAGTGAAAAATCAAGTTGTG
TATTGCCACTTACTGTAAAATCTTTGTGAGGCTGGGGGAAACGTGGTAAA
GAGAAGGCCATTGTTTGTTATAGTCTAGAGAAGGATTTCTTTTTTTGATT
CGTAATTTTTTGTCCTTTTTGAAACTTTTAAAGGGATAACGAGATAAAAT
ATGAAAATTGGCTAAAAGATTCTTTCCATGGTCCTTAGTAAGCCCTCCAA
ATATTTTTGAGAAATAACATTCCAGAGACAAGATATGACAATTAGAAATC
TCAGTTTTTCGTACCTCACACGTACCTCACGTTGAAATTCTATTGTTTTC
CAGCAGAAATTAAAAATCACAAACCTAAATATTTCGACTTTGAAAAACAA
GTAGCCTGTAAAATTTGGAGGTTTTGCTAAGGACTATGGAAGGAATCTTT
GGACTGAATTTTATTTTTCATCCCTTTAAGGTAGCTGCCCTGGAAATGAG
ATTTTCACTTGTATTTGTAAAACATCATGATCAGATTTCATCTCGGGTTC
TTTATGTTGTGCGAAAAAATTGTGACCTATAAATGCTTGCATGCCTCAAT
TTTCAACAGAAAGCAAGTGTCTTCCTAACGGTTGGACATAATTATGAAAG
TCTTCCAGAACTTGGAACAAGCTTACGCTGCACTTGAGCTTTACGATTTA
TGAACATGGTAGTATACTCCAGTTGAACGCGTCTGTTTGGGTAATTTCGT
TTTTGTTTTTATTTTTCAGGGTGCATCAAGTCCACATCATTCAGTGTATA
GCTACTCTGGTCAATCTGGATTTACATTAGATAGCTTGGTTATAAAAAGC
TAACTTGGATTTACACAGTTAACTCAGATTTAAAGGATTCCCCTCTATTC
ACTTGGCTCACCAGAATACACTTGGAATACTTTGTTTTATTTGGTTTTAC
ACGGCTCAATTGATATTACTCGGCTCACTTGATATTACTCGGCTCATTTG
ATATTACTCGGCTCACTTGATATTACTCGGCTCACTTGATATTTCTTGCC
TCACTTGATATTACTCGGCTCACTTGATTTAATCGGCTCACTTGATATTA
CTCGGCTCACTTGATACTATTCGGCTAACTTGATATTACTCGGCTAACTT
GATATTACTCGGCTAACTTGATATTACTCGGCTAACTTGACACTACTCGG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035528-exon-sc0001327-1575043694:56319..56485 | TCONS_00035528-exon-sc0001327-1575043694:56319..56485 | Clytia hemisphaerica | exon |
| TCONS_00035528-exon-sc0001327-1575043694:55085..55516 | TCONS_00035528-exon-sc0001327-1575043694:55085..55516 | Clytia hemisphaerica | exon |
| TCONS_00035528-exon-sc0001327-1510915933:56319..56485 | TCONS_00035528-exon-sc0001327-1510915933:56319..56485 | Clytia hemisphaerica | exon |
| TCONS_00035528-exon-sc0001327-1510915933:55085..55516 | TCONS_00035528-exon-sc0001327-1510915933:55085..55516 | Clytia hemisphaerica | exon |
| TCONS_00035528-exon-sc0001327-1491911889:56319..56485 | TCONS_00035528-exon-sc0001327-1491911889:56319..56485 | Clytia hemisphaerica | exon |
| TCONS_00035528-exon-sc0001327-1491911889:55085..55516 | TCONS_00035528-exon-sc0001327-1491911889:55085..55516 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001327 | supercontig | sc0001327:55085..56485 - |
Blast
The following BLAST results are available for this feature:
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