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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035520 ID=TCONS_00035520|Name=TCONS_00035520|organism=Clytia hemisphaerica|type=transcript|length=1072bp
TTAAACAAACCTAAAATGCTACAAAACCATAAAGAACCAAAATAAGACGA
CAACGCTATAGTAAATTAAACTTTAGTAAAACACACCTCTCACACACAAG
ACACTCACTCACGTCTCTCAGTGTTGAACTGATTTTTATGTACACAATTA
CAGTTAATATTTATATCCTAATTTTCCTACATATAAAACGCAAGTTGGGA
ATAGAAAAGACACTCAAAACAAAGGGGACACTAAACAAAACAGGACTCAA
GAGACACATGTGAACTAAAAGACTCTACAGGGAATAGCAATTTAAACATA
GAAACATAAACAGCACGGACAATTGAATGTTCATTACGATGGAGCAGTTT
TCTCCATCAACAACTTGCCTAAGTAATCAGACGGAGATCAATTAAGGAAG
AAGGTTACCCGTGCATTTTCTGtctgttttctttttacaaTCCAATTCGC
GTTTCCAATTTTTACCATAAGTTCTTAGAGCATAGCATGATGGACAACGC
GGCATTTTGGTTTTAACATTATTTAATACAACTTCAAGTGGAGGGATCAC
CGTATCCGCTTTATAGGAAAGCTGGTCACTTTTTACACTTACCAAGTTCT
TAGAATCGACTACTCGGTTCCAATTAGAATTACCGTACCAAATTGCTACG
GCTCTGTGGTCACTCGTTCTCCATTCTTGGTAGTAGCCATGTTCCTTAGT
AAATGAGTCCAAGGCTTTTCGATAAAGTCCTGATGTCCAGTGTTTACTGT
CTATAAACATATCGATATCCTCGTCGTAATGAAGAATGCTCTCCGAGCGG
GCGTAACTCATGACAAAACCACCGACTATAAAATATGACACATTATGATT
GTTTAAATGGGTACTAAGCTTCTCCAACACATCCATCATTTTTCGGCGAC
AGCACGGCGGCGTATCAATTCTCATTTTACGTTTGGTGTCGTAAATGGCG
CCAGGATCACAATGTCTCGTGTATTTTGTACAGCCCAAGTTTGTTATTGT
TCCATCTGTGTGAACGATCCATTTGACTCTCTTTTGGggaacttttttgt
tgttgtaaaATAACGTTTCATC Run BLAST on NCBI protein sequence of TCONS_00035520-protein >TCONS_00035520-protein ID=TCONS_00035520-protein|Name=TCONS_00035520-protein|organism=Clytia hemisphaerica|type=polypeptide|length=226bp
DETLFYNNKKVPQKRVKWIVHTDGTITNLGCTKYTRHCDPGAIYDTKRKM
RIDTPPCCRRKMMDVLEKLSTHLNNHNVSYFIVGGFVMSYARSESILHYD
EDIDMFIDSKHWTSGLYRKALDSFTKEHGYYQEWRTSDHRAVAIWYGNSN
WNRVVDSKNLVSVKSDQLSYKADTVIPPLEVVLNNVKTKMPRCPSCYALR
TYGKNWKRELDCKKKTDRKCTGNLLP Run BLAST on NCBI transcript from alignment at sc0001322:40461..41532 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035520 ID=TCONS_00035520|Name=TCONS_00035520|organism=Clytia hemisphaerica|type=transcript|length=1072bp|location=Sequence derived from alignment at sc0001322:40461..41532 (Clytia hemisphaerica)
GATGAAACGTTATtttacaacaacaaaaaagttccCCAAAAGAGAGTCAA
ATGGATCGTTCACACAGATGGAACAATAACAAACTTGGGCTGTACAAAAT
ACACGAGACATTGTGATCCTGGCGCCATTTACGACACCAAACGTAAAATG
AGAATTGATACGCCGCCGTGCTGTCGCCGAAAAATGATGGATGTGTTGGA
GAAGCTTAGTACCCATTTAAACAATCATAATGTGTCATATTTTATAGTCG
GTGGTTTTGTCATGAGTTACGCCCGCTCGGAGAGCATTCTTCATTACGAC
GAGGATATCGATATGTTTATAGACAGTAAACACTGGACATCAGGACTTTA
TCGAAAAGCCTTGGACTCATTTACTAAGGAACATGGCTACTACCAAGAAT
GGAGAACGAGTGACCACAGAGCCGTAGCAATTTGGTACGGTAATTCTAAT
TGGAACCGAGTAGTCGATTCTAAGAACTTGGTAAGTGTAAAAAGTGACCA
GCTTTCCTATAAAGCGGATACGGTGATCCCTCCACTTGAAGTTGTATTAA
ATAATGTTAAAACCAAAATGCCGCGTTGTCCATCATGCTATGCTCTAAGA
ACTTATGGTAAAAATTGGAAACGCGAATTGGAttgtaaaaagaaaacaga
CAGAAAATGCACGGGTAACCTTCTTCCTTAATTGATCTCCGTCTGATTAC
TTAGGCAAGTTGTTGATGGAGAAAACTGCTCCATCGTAATGAACATTCAA
TTGTCCGTGCTGTTTATGTTTCTATGTTTAAATTGCTATTCCCTGTAGAG
TCTTTTAGTTCACATGTGTCTCTTGAGTCCTGTTTTGTTTAGTGTCCCCT
TTGTTTTGAGTGTCTTTTCTATTCCCAACTTGCGTTTTATATGTAGGAAA
ATTAGGATATAAATATTAACTGTAATTGTGTACATAAAAATCAGTTCAAC
ACTGAGAGACGTGAGTGAGTGTCTTGTGTGTGAGAGGTGTGTTTTACTAA
AGTTTAATTTACTATAGCGTTGTCGTCTTATTTTGGTTCTTTATGGTTTT
GTAGCATTTTAGGTTTGTTTAA Coding sequence (CDS) from alignment at sc0001322:40461..41532 >TCONS_00035520 ID=TCONS_00035520|Name=TCONS_00035520|organism=Clytia hemisphaerica|type=CDS|length=681bp|location=Sequence derived from alignment at sc0001322:40461..41532 (Clytia hemisphaerica)
GATGAAACGTTATtttacaacaacaaaaaagttccCCAAAAGAGAGTCAA
ATGGATCGTTCACACAGATGGAACAATAACAAACTTGGGCTGTACAAAAT
ACACGAGACATTGTGATCCTGGCGCCATTTACGACACCAAACGTAAAATG
AGAATTGATACGCCGCCGTGCTGTCGCCGAAAAATGATGGATGTGTTGGA
GAAGCTTAGTACCCATTTAAACAATCATAATGTGTCATATTTTATAGTCG
GTGGTTTTGTCATGAGTTACGCCCGCTCGGAGAGCATTCTTCATTACGAC
GAGGATATCGATATGTTTATAGACAGTAAACACTGGACATCAGGACTTTA
TCGAAAAGCCTTGGACTCATTTACTAAGGAACATGGCTACTACCAAGAAT
GGAGAACGAGTGACCACAGAGCCGTAGCAATTTGGTACGGTAATTCTAAT
TGGAACCGAGTAGTCGATTCTAAGAACTTGGTAAGTGTAAAAAGTGACCA
GCTTTCCTATAAAGCGGATACGGTGATCCCTCCACTTGAAGTTGTATTAA
ATAATGTTAAAACCAAAATGCCGCGTTGTCCATCATGCTATGCTCTAAGA
ACTTATGGTAAAAATTGGAAACGCGAATTGGAttgtaaaaagaaaacaga
CAGAAAATGCACGGGTAACCTTCTTCCTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035520-exon-sc0001322-1491911889:40461..41532 | TCONS_00035520-exon-sc0001322-1491911889:40461..41532 | Clytia hemisphaerica | exon |
| TCONS_00035520-exon-sc0001322-1510915933:40461..41532 | TCONS_00035520-exon-sc0001322-1510915933:40461..41532 | Clytia hemisphaerica | exon |
| TCONS_00035520-exon-sc0001322-1575043694:40461..41532 | TCONS_00035520-exon-sc0001322-1575043694:40461..41532 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001322 | supercontig | sc0001322:40461..41532 . |
Blast
The following BLAST results are available for this feature:
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