TCONS_00035456 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035456
Unique NameTCONS_00035456
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2448

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035456 ID=TCONS_00035456|Name=TCONS_00035456|organism=Clytia hemisphaerica|type=transcript|length=2448bp
TGATGAGAGTGTAttgaaatttgaagttttaatGTCTTTCCgttttagtt
ttaaaataaatgtCGGAATTATATTTGAAGTATCCTTGAAGACTTGGCTC
CAATATTGTATACATCACTGTTATTCCTAAGcGTTAGATTGCGATCATCC
AAGATGTTGAATTTCCAAGATATTGCACAAATAACTGTTGAAGCGATcca
tgaaaataaagaagatgtGGGAATCATTGACCACAGTTCCAAAAAGAAAC
CCAAGACCGAagaagagttgcggaaagagaAAGTCAAAGAACACGTGTCC
GATTTAATCGATAATTCTTCGCTTCACGGACTCTCGTATATCTTCGATAA
AAGACATCCTATACGTCGTGTCATATGGTTTTTCATCACTACATCAGCTT
TTATATACTCCATGTTGAAAGTTTACGAAAGTACCGAATATTATTTATCT
TATCCGTTCACTACAGCGCGCATGCGTCAATATGTGGACAGTATTGAATT
CCCAGCTGTTTCGTTCTGTAATATCAATGATATGCGTATAAGTATATTAA
ACGGAACGAATGTTGATATCGCTATTTTAACCAATAATCCCGGGAATGTA
ACAGCAGAAGAGTACCGGAGTACAACTCGTTCCGCGGCGCATGACATTAC
GGAAATGTTAGTCGATTGTAACTTCAACGGTATGAAATGTACTGCTAAGA
ATTTTACAGAGTTTTTCTGGAAACAAGGTGATCGTTGCTTCACCTTCAAC
TCTGGTAAACAAGGACCTGTACTAAAAGTGACAGGAACTGGAGTTGAACG
TAGCCTCACTTTGACGATTAATTTACAACATTTTGATTATTACCGGGATA
GTATGGTGTCTGGGATTCATATGATTTTACACGGACAAGACGAAACGCCG
GTGAAAATCCGTGGACCGATGATATCACCGGGTTATACAAGCTTcattaa
agttgaaaagaaaaagattttgaatttgaagagcCCATACAAGACGAACT
GTGGAGAATTAgacttgaaatatttcaacGGTTATTCGATGCATACATGC
TGGTTGGAGAAGTTAACTGATTATGTGGTCAAACATTGTAATTGTAAAGA
TTTCTTTATGCCAGgaAATCATTCCATTTGTGACTTAGGAACCGCTTATA
CTTGTATGTGGCCCAAATGGGAGGAGTACGACAAGAACAAATTAGCAAAC
TGTCCATTACCATGCGAAATTGATTCGTTTCATTCGGAAACCATATCCCG
TGCTTTATTCCCTTCTGAACAATATGCTCATAAATTGAAAAAGATATTGG
AAAAAGAACCTCATATGAAAAATGTTGTCATCAAAAACGTCAAGCAATTC
ATGAGGGACAATCTTCTGCGAGTTGTTATCTATTACGACGATATGTCATA
CGAACGCGTTGAGCAACAACCAAGTTACGACACTTTGGAATGGCTCGGTG
ACGTCGGTGGACAAATTGGCCTGTTTATTGGGGCCGGTGCCATgtcttat
tttgaatttgttgatTGTATTGCATTAGTCATTTATGCGAGATTCTTCCA
ATCATTTAAACCTGCGCCACCGAATGTTTAAGATGGTTGAATTAAAGATA
CAGCGTGGAGTACTTGAAAGACTCCTTAACTCGACAAAGTTTTCTGGtca
cttcagttaacaataccttataaaccaatctccataactcgacatttcaa
taattcgaataaatttaatGGTTCTTGGTCAGATCAACGCAACTTCTGGC
CTGGAAAGTgtttttttgactgttttattTAGACCTTCAATTGCAATACA
AAGTCTGCCGTGATCTGacttacttccttttgtcagaaaataaaaatcac
aaTGAAAATTGGAAGCTAAGCAAATGGAATTTTTAAGTTCctcaaatact
tttttttttaacttgtaAAATGTATCGAGCCCGAGAGCAATCTTCTTTAC
CTAATATAAAATTTCATTGCAAATATCATAAATTGGCAAATTCTACAATT
TCTCATATCTAGcaacatattctttaaaaatggattctttgaaattcaaa
gaaaaaatgtccTTTGGCGACATTAAAAGGCTTGTTCTAATCATTGGATG
CTTAATTTCCAATTGCTAGAAATGTTTGAAGAAAATGGACTAAGTCTAGA
GTGTGGAATTTCAATTTATTAAAATGCAAAGGCTTTTTgtagaaatcatt
ttcatttagaattttaaaattgtaaaTAAATCCAAATTGTATAGAAATAC
ACCAAAAATATCATTGTTTCAAAAGCCATATTTGAATGAGAGTGATCTTT
TGGGCAATTTAACGTTTGTCGAGGAAGAAGTTTGATAAACCAGCTCTCCC
TCTGCTGGGTACTTGCCGAAATATTAAGTACCCCCGTTTTTCGTCTTCAA
GATCAAGTTTTAACtagaaaaaacatgaaaaatatcacGAAGTTTCAG
Run BLAST on NCBI

protein sequence of TCONS_00035456-protein

>TCONS_00035456-protein ID=TCONS_00035456-protein|Name=TCONS_00035456-protein|organism=Clytia hemisphaerica|type=polypeptide|length=475bp
MLNFQDIAQITVEAIHENKEDVGIIDHSSKKKPKTEEELRKEKVKEHVSD
LIDNSSLHGLSYIFDKRHPIRRVIWFFITTSAFIYSMLKVYESTEYYLSY
PFTTARMRQYVDSIEFPAVSFCNINDMRISILNGTNVDIAILTNNPGNVT
AEEYRSTTRSAAHDITEMLVDCNFNGMKCTAKNFTEFFWKQGDRCFTFNS
GKQGPVLKVTGTGVERSLTLTINLQHFDYYRDSMVSGIHMILHGQDETPV
KIRGPMISPGYTSFIKVEKKKILNLKSPYKTNCGELDLKYFNGYSMHTCW
LEKLTDYVVKHCNCKDFFMPGNHSICDLGTAYTCMWPKWEEYDKNKLANC
PLPCEIDSFHSETISRALFPSEQYAHKLKKILEKEPHMKNVVIKNVKQFM
RDNLLRVVIYYDDMSYERVEQQPSYDTLEWLGDVGGQIGLFIGAGAMSYF
EFVDCIALVIYARFFQSFKPAPPNV
Run BLAST on NCBI

transcript from alignment at sc0001314:27062..36657+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035456 ID=TCONS_00035456|Name=TCONS_00035456|organism=Clytia hemisphaerica|type=transcript|length=9596bp|location=Sequence derived from alignment at sc0001314:27062..36657+ (Clytia hemisphaerica)
TGATGAGAGTGTAttgaaatttgaagttttaatGTCTTTCCgttttagtt
ttaaaataaatgtCGGAATTATATTTGAAGTATCCTTGAAGACTTGGCTC
CAATATTGTATACATCACTGTTATTCCTAAGGTATGTATAAGCAGTGTGT
ACACATTGTACAAATTTGTACAAGCTCCGCGACTGGCGACTGATCacctt
tctttttttatacttCTAAGGGTTGCGagttaaaaagacaaaaaagtgtT
TCAATAAGGGGAGGTTTGGGTTGAAGAATTTCGATAGATGAAAAGTCTAC
TCCCGATAGACACACCCTGTCTAAGTTGAAACATCCCTGTTTAAGTAACT
GTTGGATTTCGGGAGCCCTAATCCAGAAACTAGCATTCAACTATCAATGA
AGAACAATTTCTTTCAAACGGATTCCTTTTTAAAATGAATCTTACAAGAT
TTATTGGAATTAAAttcattcaaatatttttcctgAAGAGGGATTGTCAA
AAGCGATTAAGCACGAGATCATCACAAGACAAATTTTGAGCCTAAACTGA
TAAAAAGCTTAGTGAATTTTTTCTGATATTCAAAGATTATCTGAGCAAAA
TTATTTTAGTCATGTTTGTAGTAACAATAAACCAACCATATATTAAAGTT
GTTATCCTGTAGTTTTTGATTCGAAAGTTAAAGCTACAAACTTTagctaa
aattgattttatgttATAGAATGCTACTGTTTTTTTTCTGCGTAATTCTG
AGTCTATTCTATCTATACACTATCCCACCCGGTGATTTCTTTATACTTTG
TACGGTCCTTTAAAAAAGTCATGTGACAGAGGTTTCATCAAACAAGAATA
GAATAAAACTGAATTTTTACAAACTCGCCTTATTATCAAAGATTATATAA
CCACAATGTGCCTGGAAAACAGCATTACTCAAAGCTACACGCTAAAAACC
GTGATGTAATTACTTGACTCGCCATAAAAGCCTTTTTGGAAAACGCTGTC
AAAAATTCAATAGGATATTTATAATAAAAGGACTTTTGATTGGATGAAAA
TTAACTTTAAAGTAAGCATTGTCCAATAGAATTACCTCTCTCAAAAATGT
TTAAGTGAGTTAAAGATATAGACTCACCAGGTAATAGAAGTCTTATTATA
AAAAGGTTTATATGTCTTTAAGGTTTATTGAAGTGCTTTACTGTGATTAT
ATGTCGATAGGTATCCATTGATTAATTGTCATCAATCGCATTTAGCTTAA
GGAAAGAGCTTAGCTTTTGAATCATTTCATTGGTATGTATATAAGACTAG
AACACGCGTAGGTATGCAAAGTCGCTGCTATTTGTATAAATTTAAGATTA
ATTTAAATTCGATTATGCTTTGGTATGATTTGAAGTTTGATAAAAGGATA
AAGTTTTAACTTTTCACTAAGAAAaagccctttttaacttttttgcgtTA
TTTGCCTTCACGGCTTTATTGTCtccgaagccttaaaatctaGAGATATC
TGCTGGCCTAATATAAATATCCCAACCTCTTTAACCTTTAAGTGCGTCGC
AAAACATGGGGCTACAGCTTCAGCCAAAAACTCTCCCTGATGATTTCGTG
ACTAAGATTGTGACTATATTTGAGATATAAAGGTTGTAAGGATGTTGTGA
AGGTGTTTTTAACATTCCTTAGTTTATTAAAATGGTATTCTCGAAAAGCC
GATAATTAAAATATCGGAGCTCGAAATATCTGAACAAGACGTAACTTTTC
CTTCTCTGAAagcaaatttcatattttttttcaattttgcaaagtttttg
agtctataaaatacatcaaaattttaattaggATAGCTAGAAAATAGAAA
CATAAAAAGCACCGATATCGAGTGGTTTCTTTAGTTAAAATTTGAAGTTT
CGTCTTCCTATATTGAAGCAAGTAAATTTAAAAAGAGAACTGAAATCAAT
AAGCTTTGACCTGACCTAAGATTTACAGCACTTTGATCTCTTGGCTTGGT
CAAGGTGACACCTTTAGAGAACTTTTTTCTGGCTTTCTATATGGACTTAA
AATCTTTTCACATTATGTTATTCTGGTAAGTGGAAAGCGGTCTTCAAGAA
ATTTCctattttaaacgttttttttataggaacatgctaaaattttaaaa
cctgcagatgttcttaactttttgagttttaagcctaaaaatgttcttaa
cttgttctaaatattttgaccattGAAGCCTTAGGTTCTTAtatgttctt
atcaaaaatcGTGTATCCTAGTGGATGCAATGCTAGAGATCACACAAAGT
TCACAATCTTTAGCAATCTGCTTCAAGGGTTGGGTTATTAAGCCCTATAA
ATAAGCCTTTTGTATTCGAAGAtgtctttttcatttcagcGTTAGATTGC
GATCATCCAAGATGTTGAATTTCCAAGATATTGCACAAATAACTGTTGAA
GCGATccatgaaaataaagaagatgtGGGAATCATTGACCACAGTAAGTA
ATAtatccattgagtttaaagcccgaagggctatagTAGGATCTCTAACC
tatcccaggcaagaaaaagtgaagccatctatttcccatccaaaatgcGA
CAGACGACAGACGACAGATTGTATTTAGCGgtgtttttgaggattttttg
aaatctagcgatagttTACATAGTTTCAAACCGGTGTttttgtaaaaacc
acgcgcaggAGATctgatgggaaataagtggtttcatttcccatccaggg
gTCTTGAGtgtagcccttcgggcttggaggTCATTGGTAATGGTATCCTC
AATAATCTCGTACCCAAAGCCACTTGCACCACTTGTAAATTTTACTGATA
GACGTAACGTAATACAAACTTTCATGAAAAAGCGAGCAAAGGAACTGGAC
TCGAGTTTGTAATATCCTAAATCCCTGTAGTGGGTTATATGCTTCTACGA
TATCTTTTACCACTGAGAAGTCTGTCCATAGTATaggaaagccgcggctg
gaatgataacatctgaatttctgttattctatctctgtcgtatttgatga
ctatttgttgatcaagaaatcagtaatgtagcatctNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcctcga
aatgccttcgcaatatttcagtNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatttaaact
gacaggaaagttgtcatcttgaatatagttcttataatttcaattttagc
gaaaaactatgtttccacaaaatacccctaaaatatgtccagaATTAGTT
Catgtgttctattgggtacagattcaaagatatctagcaacaaaaaaact
ttttgtgaaggaaaataagagaaaaaagacaatgcggtacatattccagc
cgcggctttcttatactatggtctGTCTGAATCCAGTCCAGATCGAAGAT
TTAAAAAGGTTGTGTAATGGCCattaaaaatgaacaaataaGAAATCAGC
GGAGGTCATTTAATAATACCGAATTCAGCTCGAATTTGAAGAAATATTCT
TTGGAATAAccgaatcaaaattttcaagtacCAAAACCACATAATTGGAT
TATTTCAGTGTTTTCATCATGGAAAGGCTACCATAATATAAACCAACGCC
TGAATAACCCTCTCCAGGCCCGGTGAAAGGGGGGAGACTAGGGcaacttc
agcctccccacttttgagcaaatgagatatTTTCTCAATTTCCTAGCAAA
TTTGATCTTATTTTGAGCCTTCAACCTCCCAACtttaacggttgttccgc
cgggcctgttcACTTCCTTAATATTAAATCGTAGAGGAATGCGTTGTGCC
TGAATTGACCTTTAGCAGTTCATTTTTGTGATGAAATTAGATTTAATAAA
ACCTTTTTCAGCCAATAATCGCACCTTCTTGTCAAATTTCAACTCATCAA
AACGGGGGTAGCTCTTTAATAGAGTTTGATTAAATAAAcatctaaaacaa
aaataaagagaTCACTTAGACAAGACTTTAGATTTAGAAAAAACTTTAGG
CAAATATACAAATTGAAAGTTTCCCCTTTTTACTCTACAGGGTAAATAAA
TTTGCCCATAATTTAAAGACTCCATCAAAAATTACGATGatatcagaaaa
tttgaatgtgTCTCATTTTTCGGAACAAATTTCGAGtgaatctttttaaa
aacaaatgttGCTTTGAGTTTGTCTTTGATGGAGGAATAGAAATAtcgtt
tttaaattttggattGATGAAAAGACATTAAATCGTGTACAAGTGGTTCA
AAAAAGGGGCGTAACCGTAGAATTCATCAAACTGGAATTTTTATTGAAAC
CGTAAAAAGTTTATGACAACATATTATTTTGCTTGGCTGAACATTTTTAA
CAACAAGAATTTTGAGACTTGATTCCGgtgaagttttgaattttagaatt
cTCTACAAACATGAATATCATGAGACACAGAAAATCTGACTCCTTTGATT
TGCAGAGAGCTACATCTCTTGATAACATCATATGTATGTTAGAAATCAAA
GGAGAAATGAACCCTCGAAAAGGAAAAGCTTTCAAAGATGTTGCTTCCAT
TTTATCAGGTTCCAAAAAGAAACCCAAGACCGAagaagagttgcggaaag
agaAAGTCAAAGAACACGTGTCCGATTTAATCGATAATTCTTCGCTTCAC
GGACTCTCGTATATCTTCGATAAAAGACATCCTATACGTCGTGTCATATG
GTTTTTCATCACTACATCAGCTTTTATATACTCCATGTTGAAAGTTTACG
AAAGTACCGAATATTATTTATCTTATCCGTTCACTACAGCGCGCATGCGT
CAATATGTGGACAGTATTGAATTCCCAGCTGTTTCGTTCTGTAATATCAA
TGATATGCGTATAAGTATATTAAACGGAACGAATGTTGATATCGCTATTT
TAACCAATAATCCCGGGAATGTAACAGCAGAAGAGTACCGGAGTACAACT
CGTTCCGCGGCGCATGACATTACGGAAATGTTAGTCGATTGTAACTTCAA
CGGTATGAAATGTACTGCTAAGAATTTTACAGAGTTTTTCTGGAAACAAG
GTGATCGTTGCTTCACCTTCAACTCTGGTAAACAAGGACCTGTACTAAAA
GTGACAGGAACTGGAGTTGAACGTAGCCTCACTTTGACGATTAATTTACA
ACATTTTGATTATTACCGGGATAGTATGGTGTCTGGGATTCATATGATTT
TACACGGACAAGACGAAACGCCGGTGAAAATCCGTGGACCGATGATATCA
CCGGGTTATACAAGCTTcattaaagttgaaaagaaaaaggTAATTAAGTG
CAATTGACTCACTAGTTTAGTAATGACTaagtcaaaagttttttcagtac
acattttttttaaaagcaacTCCAACTTTCGGCTAAGAGCTGGGGTTGCG
TAAcgttttagccgttttttgaaaaatttgctttgactaCCCCCAgatat
attatatacattttggGTGAAGGACTATCGGTTGCCAagcttagattatc
taaaatgCTTTTTCTCTTCTTTACGAGATAGTAAAAAATTGGCTAATTTC
AAAGCTCGAGACTTAGCAACCTGGTTAGCAAAATGTTTACTCTATAAAAG
CTATCGGAGGTATCTTTTATGCACCAGTCAAATCGAAATTCCAGTTTTTC
AAGATGTAAAACCTTCGTACACCTCTGTCTCACTAAAAACTATTAGCcag
caaattttcattttttcgacTGTCAAAACTTTctcttttctaaatttttg
aactGTATTatagattttgaatttgaagagcCCATACAAGACGAACTGTG
GAGAATTAgacttgaaatatttcaacGGTTATTCGATGCATACATGCTGG
TTGGAGAAGTTAACTGATTATGTGGTCAAACATTGTAATTGTAAAGATTT
CTTTATGCCAGGTTAGAATGATAACCATTGAATTCTTCTTCGCACAGATA
AGTTATAACGTTAccgaaaatttttcatttatctagGATGTGAAACGAAT
ACATGGTCTTGCTAAGATAATTTTACTGAACACATACACATACATTTATT
TAGCAAGTTaaaccagagatttgggaaaaccCTCACAAGGTATGTGACCT
ACTTTTGCGCTAACGAGAAAGGTAATCTAGTCAATCTAAGCAGTAAAAGT
GAATATTCTCACCAAGAAGCTTCGGATTCGAATAATGACTAGTTTTACAA
AATGCtaataatctttttcttttaggaAATCATTCCATTTGTGACTTAGG
AACCGCTTATACTTGTATGTGGCCCAAATGGGGTAAGtttttaagttaaa
ttttttagaaattttcatggAAGGATCTCTAAAGTTCGTTTCGTAGTTGA
ATCTTTTGTTAGACTAGACGATATGAACAGAGCCTATAATGATTCTAATG
ATTCACAAACTTTTTCGAGGAATCCCATGGATGTTTGGCTCCTGTTTCAC
TAATCGTCCGAAAAAAATCCGTTCGTGGAGCTGGAAGGATTGTTACTTTT
TAATGATCTACCGCCTGAACAATTCGGGCTTCTTTGATCCCTTGTCTTGG
ACATGTGCTTTACCCCTGGTCATCAACACAtcaaccccctggaaatttgg
GAAATTGTCGTTTTGAGAATCTTTCGTATCTGGacaattcaattttcaac
cTCCTGACGGTGTTTAGCTTGAAAAACAGTATAAACAAAAAATcgataat
ttcaattttcttttatagAGGAGTACGACAAGAACAAATTAGCAAACTGT
CCATTACCATGCGAAATTGATTCGTTTCATTCGGAAACCATATCCCGTGC
TTTATTCCCTTCTGAACAATATGCTCATAAATTGAAAAAGATATTGGAAA
AAGAACCTCATATGAAAAATGTTGTCATCAAAAACGTCAAGCAATTCATG
AGGTATGATTTTtagaatttcttcttcttttcttctgaaaagaaaaagcc
AACAGTTTCTTTGATCTAATGATAACATTGAACACCCCCTGTCTAGACAA
ATTTAAGGACTAtctaagtccaaaaaatatacaTTTAACCTGTAtagacc
ccgggggggggggggcccgggTTTTTtgggctgggggggggggggcactg
gcttttcggactgacggtatgtgcgggccgagaattggcttttaaaattg
caccctttcAGTGCAGcaaaattcgatgaaaatcatacccttagagtgca
tctTCCCCCATATTATCAAtccttttcgtgcaaaaaattgtcaaaattct
agcatttttaagcaaaatatctcgatttttcaacaattttctaaaatttc
tacccttacattgcatctttagtttttccgacccttacagtgcattttaa
acatcttGGAAAGGGTACCCTTagggcccgcacatacccgtcagtcattt
tgcccagccgccccccccccccggggtataGACTCAGTGTGGGAACTTGG
CAAAAAGGCGTATGGGGATGCCACTgatcagggtacctttttcacctCCA
TGAGTCCCAGGAAGGGtcacaaaaacatcaaaataaaaaaatcagtccTT
TGTTGGGGGAAGTTCACTTTTTCCGCTCGCGAAATTCTCAAAAACGAggc
gtagggtccatttttcgaaccacAGCGAAACACCCTCGTCGGTCAGCGAG
GTTAGTACCCCCGGGTGTATAGACATACATACCCTCCCTTATTGAGATCT
AAATGGGTCATTCTGTTTATAAAGAGAGGGTGGAAAAGATTTTTCAGGGA
GTAATCCAAGAGGTCAGGGAGTAATCCAAGAAGAGTTTCCAGGTTtttaa
agaatgtttttttcctgGGGTGAATTGATTTTCCCGGGGATAAAAGTTAC
CATTAAACTTCATCTACCTGTATAtgaatggaacagcccaatgttTGTAC
AATCAAAATGATCTTATATTTGGCTAGTATGGTTTGATTTTATTGTTCAA
CACAAAATATCAAGAGgtgatgaaattttaaaatctcgTATTTTTCTTTC
CAGGGACAATCTTCTGCGAGTTGTTATCTATTACGACGATATGTCATACG
AACGCGTTGAGCAACAACCAAGTTACGACACTTTGGAATGGCTCGGTGAC
GTCGGTGGACAAATTGGCCTGTTTATTGGGGCCGGTGCCATgtcttattt
tgaatttgttgatTGTATTGCATTAGTCATTTATGCGAGATTCTTCCAAT
CATTTAAACCTGCGCCACCGAATGTTTAAGATGGTTGAATTAAAGATACA
GCGTGGAGTACTTGAAAGACTCCTTAACTCGACAAAGTTTTCTGGtcact
tcagttaacaataccttataaaccaatctccataactcgacatttcaata
attcgaataaatttaatGGTTCTTGGTCAGATCAACGCAACTTCTGGCCT
GGAAAGTgtttttttgactgttttattTAGACCTTCAATTGCAATACAAA
GTCTGCCGTGATCTGacttacttccttttgtcagaaaataaaaatcacaa
TGAAAATTGGAAGCTAAGCAAATGGAATTTTTAAGTTCctcaaatacttt
tttttttaacttgtaAAATGTATCGAGCCCGAGAGCAATCTTCTTTACCT
AATATAAAATTTCATTGCAAATATCATAAATTGGCAAATTCTACAATTTC
TCATATCTAGcaacatattctttaaaaatggattctttgaaattcaaaga
aaaaatgtccTTTGGCGACATTAAAAGGCTTGTTCTAATCATTGGATGCT
TAATTTCCAATTGCTAGAAATGTTTGAAGAAAATGGACTAAGTCTAGAGT
GTGGAATTTCAATTTATTAAAATGCAAAGGCTTTTTgtagaaatcatttt
catttagaattttaaaattgtaaaTAAATCCAAATTGTATAGAAATACAC
CAAAAATATCATTGTTTCAAAAGCCATATTTGAATGAGAGTGATCTTTTG
GGCAATTTAACGTTTGTCGAGGAAGAAGTTTGATAAACCAGCTCTCCCTC
TGCTGGGTACTTGCCGAAATATTAAGTACCCCCGTTTTTCGTCTTCAAGA
TCAAGTTTTAACtagaaaaaacatgaaaaatatcacGAAGTTTCAG

Coding sequence (CDS) from alignment at sc0001314:27062..36657+

>TCONS_00035456 ID=TCONS_00035456|Name=TCONS_00035456|organism=Clytia hemisphaerica|type=CDS|length=8568bp|location=Sequence derived from alignment at sc0001314:27062..36657+ (Clytia hemisphaerica)
ATGTTGAATTTCCAAGATATTGCACAAATAACTGTTGAAGCGATccatga
aaataaagaagatgtGGGAATCATTGACCACAGTTCCAAAAAGAAACCCA
AGACCGAagaagagttgcggaaagagaAAGTCAAAGAACACGTGTCCGAT
TTAATCGATAATTCTTCGCTTCACGGACTCTCGTATATCTTCGATAAAAG
ACATCCTATACGTCGTGTCATATGGTTTTTCATCACTACATCAGCTTTTA
TATACTCCATGTTGAAAGTTTACGAAAGTACCGAATATTATTTATCTTAT
CCGTTCACTACAGCGCGCATGCGTCAATATGTGGACAGTATTGAATTCCC
AGCTGTTTCGTTCTGTAATATCAATGATATGCGTATAAGTATATTAAACG
GAACGAATGTTGATATCGCTATTTTAACCAATAATCCCGGGAATGTAACA
GCAGAAGAGTACCGGAGTACAACTCGTTCCGCGGCGCATGACATTACGGA
AATGTTAGTCGATTGTAACTTCAACGGTATGAAATGTACTGCTAAGAATT
TTACAGAGTTTTTCTGGAAACAAGGTGATCGTTGCTTCACCTTCAACTCT
GGTAAACAAGGACCTGTACTAAAAGTGACAGGAACTGGAGTTGAACGTAG
CCTCACTTTGACGATTAATTTACAACATTTTGATTATTACCGGGATAGTA
TGGTGTCTGGGATTCATATGATTTTACACGGACAAGACGAAACGCCGGTG
AAAATCCGTGGACCGATGATATCACCGGGTTATACAAGCTTcattaaagt
tgaaaagaaaaagattttgaatttgaagagcCCATACAAGACGAACTGTG
GAGAATTAgacttgaaatatttcaacGGTTATTCGATGCATACATGCTGG
TTGGAGAAGTTAACTGATTATGTGGTCAAACATTGTAATTGTAAAGATTT
CTTTATGCCAGgaAATCATTCCATTTGTGACTTAGGAACCGCTTATACTT
GTATGTGGCCCAAATGGGAGGAGTACGACAAGAACAAATTAGCAAACTGT
CCATTACCATGCGAAATTGATTCGTTTCATTCGGAAACCATATCCCGTGC
TTTATTCCCTTCTGAACAATATGCTCATAAATTGAAAAAGATATTGGAAA
AAGAACCTCATATGAAAAATGTTGTCATCAAAAACGTCAAGCAATTCATG
AGGGACAATCTTCTGCGAGTTGTTATCTATTACGACGATATGTCATACGA
ACGCGTTGAGCAACAACCAAGTTACGACACTTTGGAATGGCTCGGTGACG
TCGGTGGACAAATTGGCCTGTTTATTGGGGCCGGTGCCATgtcttatttt
gaatttgttgatTGTATTGCATTAGTCATTTATGCGAGATTCTTCCAATC
ATTTAAACCTGCGCCACCGAATGTTTAAATGTTGAATTTCCAAGATATTG
CACAAATAACTGTTGAAGCGATccatgaaaataaagaagatgtGGGAATC
ATTGACCACAGTTCCAAAAAGAAACCCAAGACCGAagaagagttgcggaa
agagaAAGTCAAAGAACACGTGTCCGATTTAATCGATAATTCTTCGCTTC
ACGGACTCTCGTATATCTTCGATAAAAGACATCCTATACGTCGTGTCATA
TGGTTTTTCATCACTACATCAGCTTTTATATACTCCATGTTGAAAGTTTA
CGAAAGTACCGAATATTATTTATCTTATCCGTTCACTACAGCGCGCATGC
GTCAATATGTGGACAGTATTGAATTCCCAGCTGTTTCGTTCTGTAATATC
AATGATATGCGTATAAGTATATTAAACGGAACGAATGTTGATATCGCTAT
TTTAACCAATAATCCCGGGAATGTAACAGCAGAAGAGTACCGGAGTACAA
CTCGTTCCGCGGCGCATGACATTACGGAAATGTTAGTCGATTGTAACTTC
AACGGTATGAAATGTACTGCTAAGAATTTTACAGAGTTTTTCTGGAAACA
AGGTGATCGTTGCTTCACCTTCAACTCTGGTAAACAAGGACCTGTACTAA
AAGTGACAGGAACTGGAGTTGAACGTAGCCTCACTTTGACGATTAATTTA
CAACATTTTGATTATTACCGGGATAGTATGGTGTCTGGGATTCATATGAT
TTTACACGGACAAGACGAAACGCCGGTGAAAATCCGTGGACCGATGATAT
CACCGGGTTATACAAGCTTcattaaagttgaaaagaaaaagattttgaat
ttgaagagcCCATACAAGACGAACTGTGGAGAATTAgacttgaaatattt
caacGGTTATTCGATGCATACATGCTGGTTGGAGAAGTTAACTGATTATG
TGGTCAAACATTGTAATTGTAAAGATTTCTTTATGCCAGgaAATCATTCC
ATTTGTGACTTAGGAACCGCTTATACTTGTATGTGGCCCAAATGGGAGGA
GTACGACAAGAACAAATTAGCAAACTGTCCATTACCATGCGAAATTGATT
CGTTTCATTCGGAAACCATATCCCGTGCTTTATTCCCTTCTGAACAATAT
GCTCATAAATTGAAAAAGATATTGGAAAAAGAACCTCATATGAAAAATGT
TGTCATCAAAAACGTCAAGCAATTCATGAGGGACAATCTTCTGCGAGTTG
TTATCTATTACGACGATATGTCATACGAACGCGTTGAGCAACAACCAAGT
TACGACACTTTGGAATGGCTCGGTGACGTCGGTGGACAAATTGGCCTGTT
TATTGGGGCCGGTGCCATgtcttattttgaatttgttgatTGTATTGCAT
TAGTCATTTATGCGAGATTCTTCCAATCATTTAAACCTGCGCCACCGAAT
GTTTAAATGTTGAATTTCCAAGATATTGCACAAATAACTGTTGAAGCGAT
ccatgaaaataaagaagatgtGGGAATCATTGACCACAGTTCCAAAAAGA
AACCCAAGACCGAagaagagttgcggaaagagaAAGTCAAAGAACACGTG
TCCGATTTAATCGATAATTCTTCGCTTCACGGACTCTCGTATATCTTCGA
TAAAAGACATCCTATACGTCGTGTCATATGGTTTTTCATCACTACATCAG
CTTTTATATACTCCATGTTGAAAGTTTACGAAAGTACCGAATATTATTTA
TCTTATCCGTTCACTACAGCGCGCATGCGTCAATATGTGGACAGTATTGA
ATTCCCAGCTGTTTCGTTCTGTAATATCAATGATATGCGTATAAGTATAT
TAAACGGAACGAATGTTGATATCGCTATTTTAACCAATAATCCCGGGAAT
GTAACAGCAGAAGAGTACCGGAGTACAACTCGTTCCGCGGCGCATGACAT
TACGGAAATGTTAGTCGATTGTAACTTCAACGGTATGAAATGTACTGCTA
AGAATTTTACAGAGTTTTTCTGGAAACAAGGTGATCGTTGCTTCACCTTC
AACTCTGGTAAACAAGGACCTGTACTAAAAGTGACAGGAACTGGAGTTGA
ACGTAGCCTCACTTTGACGATTAATTTACAACATTTTGATTATTACCGGG
ATAGTATGGTGTCTGGGATTCATATGATTTTACACGGACAAGACGAAACG
CCGGTGAAAATCCGTGGACCGATGATATCACCGGGTTATACAAGCTTcat
taaagttgaaaagaaaaagattttgaatttgaagagcCCATACAAGACGA
ACTGTGGAGAATTAgacttgaaatatttcaacGGTTATTCGATGCATACA
TGCTGGTTGGAGAAGTTAACTGATTATGTGGTCAAACATTGTAATTGTAA
AGATTTCTTTATGCCAGgaAATCATTCCATTTGTGACTTAGGAACCGCTT
ATACTTGTATGTGGCCCAAATGGGAGGAGTACGACAAGAACAAATTAGCA
AACTGTCCATTACCATGCGAAATTGATTCGTTTCATTCGGAAACCATATC
CCGTGCTTTATTCCCTTCTGAACAATATGCTCATAAATTGAAAAAGATAT
TGGAAAAAGAACCTCATATGAAAAATGTTGTCATCAAAAACGTCAAGCAA
TTCATGAGGGACAATCTTCTGCGAGTTGTTATCTATTACGACGATATGTC
ATACGAACGCGTTGAGCAACAACCAAGTTACGACACTTTGGAATGGCTCG
GTGACGTCGGTGGACAAATTGGCCTGTTTATTGGGGCCGGTGCCATgtct
tattttgaatttgttgatTGTATTGCATTAGTCATTTATGCGAGATTCTT
CCAATCATTTAAACCTGCGCCACCGAATGTTTAAATGTTGAATTTCCAAG
ATATTGCACAAATAACTGTTGAAGCGATccatgaaaataaagaagatgtG
GGAATCATTGACCACAGTTCCAAAAAGAAACCCAAGACCGAagaagagtt
gcggaaagagaAAGTCAAAGAACACGTGTCCGATTTAATCGATAATTCTT
CGCTTCACGGACTCTCGTATATCTTCGATAAAAGACATCCTATACGTCGT
GTCATATGGTTTTTCATCACTACATCAGCTTTTATATACTCCATGTTGAA
AGTTTACGAAAGTACCGAATATTATTTATCTTATCCGTTCACTACAGCGC
GCATGCGTCAATATGTGGACAGTATTGAATTCCCAGCTGTTTCGTTCTGT
AATATCAATGATATGCGTATAAGTATATTAAACGGAACGAATGTTGATAT
CGCTATTTTAACCAATAATCCCGGGAATGTAACAGCAGAAGAGTACCGGA
GTACAACTCGTTCCGCGGCGCATGACATTACGGAAATGTTAGTCGATTGT
AACTTCAACGGTATGAAATGTACTGCTAAGAATTTTACAGAGTTTTTCTG
GAAACAAGGTGATCGTTGCTTCACCTTCAACTCTGGTAAACAAGGACCTG
TACTAAAAGTGACAGGAACTGGAGTTGAACGTAGCCTCACTTTGACGATT
AATTTACAACATTTTGATTATTACCGGGATAGTATGGTGTCTGGGATTCA
TATGATTTTACACGGACAAGACGAAACGCCGGTGAAAATCCGTGGACCGA
TGATATCACCGGGTTATACAAGCTTcattaaagttgaaaagaaaaagatt
ttgaatttgaagagcCCATACAAGACGAACTGTGGAGAATTAgacttgaa
atatttcaacGGTTATTCGATGCATACATGCTGGTTGGAGAAGTTAACTG
ATTATGTGGTCAAACATTGTAATTGTAAAGATTTCTTTATGCCAGgaAAT
CATTCCATTTGTGACTTAGGAACCGCTTATACTTGTATGTGGCCCAAATG
GGAGGAGTACGACAAGAACAAATTAGCAAACTGTCCATTACCATGCGAAA
TTGATTCGTTTCATTCGGAAACCATATCCCGTGCTTTATTCCCTTCTGAA
CAATATGCTCATAAATTGAAAAAGATATTGGAAAAAGAACCTCATATGAA
AAATGTTGTCATCAAAAACGTCAAGCAATTCATGAGGGACAATCTTCTGC
GAGTTGTTATCTATTACGACGATATGTCATACGAACGCGTTGAGCAACAA
CCAAGTTACGACACTTTGGAATGGCTCGGTGACGTCGGTGGACAAATTGG
CCTGTTTATTGGGGCCGGTGCCATgtcttattttgaatttgttgatTGTA
TTGCATTAGTCATTTATGCGAGATTCTTCCAATCATTTAAACCTGCGCCA
CCGAATGTTTAAATGTTGAATTTCCAAGATATTGCACAAATAACTGTTGA
AGCGATccatgaaaataaagaagatgtGGGAATCATTGACCACAGTTCCA
AAAAGAAACCCAAGACCGAagaagagttgcggaaagagaAAGTCAAAGAA
CACGTGTCCGATTTAATCGATAATTCTTCGCTTCACGGACTCTCGTATAT
CTTCGATAAAAGACATCCTATACGTCGTGTCATATGGTTTTTCATCACTA
CATCAGCTTTTATATACTCCATGTTGAAAGTTTACGAAAGTACCGAATAT
TATTTATCTTATCCGTTCACTACAGCGCGCATGCGTCAATATGTGGACAG
TATTGAATTCCCAGCTGTTTCGTTCTGTAATATCAATGATATGCGTATAA
GTATATTAAACGGAACGAATGTTGATATCGCTATTTTAACCAATAATCCC
GGGAATGTAACAGCAGAAGAGTACCGGAGTACAACTCGTTCCGCGGCGCA
TGACATTACGGAAATGTTAGTCGATTGTAACTTCAACGGTATGAAATGTA
CTGCTAAGAATTTTACAGAGTTTTTCTGGAAACAAGGTGATCGTTGCTTC
ACCTTCAACTCTGGTAAACAAGGACCTGTACTAAAAGTGACAGGAACTGG
AGTTGAACGTAGCCTCACTTTGACGATTAATTTACAACATTTTGATTATT
ACCGGGATAGTATGGTGTCTGGGATTCATATGATTTTACACGGACAAGAC
GAAACGCCGGTGAAAATCCGTGGACCGATGATATCACCGGGTTATACAAG
CTTcattaaagttgaaaagaaaaagattttgaatttgaagagcCCATACA
AGACGAACTGTGGAGAATTAgacttgaaatatttcaacGGTTATTCGATG
CATACATGCTGGTTGGAGAAGTTAACTGATTATGTGGTCAAACATTGTAA
TTGTAAAGATTTCTTTATGCCAGgaAATCATTCCATTTGTGACTTAGGAA
CCGCTTATACTTGTATGTGGCCCAAATGGGAGGAGTACGACAAGAACAAA
TTAGCAAACTGTCCATTACCATGCGAAATTGATTCGTTTCATTCGGAAAC
CATATCCCGTGCTTTATTCCCTTCTGAACAATATGCTCATAAATTGAAAA
AGATATTGGAAAAAGAACCTCATATGAAAAATGTTGTCATCAAAAACGTC
AAGCAATTCATGAGGGACAATCTTCTGCGAGTTGTTATCTATTACGACGA
TATGTCATACGAACGCGTTGAGCAACAACCAAGTTACGACACTTTGGAAT
GGCTCGGTGACGTCGGTGGACAAATTGGCCTGTTTATTGGGGCCGGTGCC
ATgtcttattttgaatttgttgatTGTATTGCATTAGTCATTTATGCGAG
ATTCTTCCAATCATTTAAACCTGCGCCACCGAATGTTTAAATGTTGAATT
TCCAAGATATTGCACAAATAACTGTTGAAGCGATccatgaaaataaagaa
gatgtGGGAATCATTGACCACAGTTCCAAAAAGAAACCCAAGACCGAaga
agagttgcggaaagagaAAGTCAAAGAACACGTGTCCGATTTAATCGATA
ATTCTTCGCTTCACGGACTCTCGTATATCTTCGATAAAAGACATCCTATA
CGTCGTGTCATATGGTTTTTCATCACTACATCAGCTTTTATATACTCCAT
GTTGAAAGTTTACGAAAGTACCGAATATTATTTATCTTATCCGTTCACTA
CAGCGCGCATGCGTCAATATGTGGACAGTATTGAATTCCCAGCTGTTTCG
TTCTGTAATATCAATGATATGCGTATAAGTATATTAAACGGAACGAATGT
TGATATCGCTATTTTAACCAATAATCCCGGGAATGTAACAGCAGAAGAGT
ACCGGAGTACAACTCGTTCCGCGGCGCATGACATTACGGAAATGTTAGTC
GATTGTAACTTCAACGGTATGAAATGTACTGCTAAGAATTTTACAGAGTT
TTTCTGGAAACAAGGTGATCGTTGCTTCACCTTCAACTCTGGTAAACAAG
GACCTGTACTAAAAGTGACAGGAACTGGAGTTGAACGTAGCCTCACTTTG
ACGATTAATTTACAACATTTTGATTATTACCGGGATAGTATGGTGTCTGG
GATTCATATGATTTTACACGGACAAGACGAAACGCCGGTGAAAATCCGTG
GACCGATGATATCACCGGGTTATACAAGCTTcattaaagttgaaaagaaa
aagattttgaatttgaagagcCCATACAAGACGAACTGTGGAGAATTAga
cttgaaatatttcaacGGTTATTCGATGCATACATGCTGGTTGGAGAAGT
TAACTGATTATGTGGTCAAACATTGTAATTGTAAAGATTTCTTTATGCCA
GgaAATCATTCCATTTGTGACTTAGGAACCGCTTATACTTGTATGTGGCC
CAAATGGGAGGAGTACGACAAGAACAAATTAGCAAACTGTCCATTACCAT
GCGAAATTGATTCGTTTCATTCGGAAACCATATCCCGTGCTTTATTCCCT
TCTGAACAATATGCTCATAAATTGAAAAAGATATTGGAAAAAGAACCTCA
TATGAAAAATGTTGTCATCAAAAACGTCAAGCAATTCATGAGGGACAATC
TTCTGCGAGTTGTTATCTATTACGACGATATGTCATACGAACGCGTTGAG
CAACAACCAAGTTACGACACTTTGGAATGGCTCGGTGACGTCGGTGGACA
AATTGGCCTGTTTATTGGGGCCGGTGCCATgtcttattttgaatttgttg
atTGTATTGCATTAGTCATTTATGCGAGATTCTTCCAATCATTTAAACCT
GCGCCACCGAATGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020727XLOC_020727Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035456-proteinTCONS_00035456-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035456-exon-sc0001314-1491911889:27062..27192TCONS_00035456-exon-sc0001314-1491911889:27062..27192Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:27062..27192TCONS_00035456-exon-sc0001314-1510915933:27062..27192Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:27062..27192TCONS_00035456-exon-sc0001314-1575043694:27062..27192Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:29451..29554TCONS_00035456-exon-sc0001314-1491911889:29451..29554Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:29451..29554TCONS_00035456-exon-sc0001314-1510915933:29451..29554Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:29451..29554TCONS_00035456-exon-sc0001314-1575043694:29451..29554Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:32120..32850TCONS_00035456-exon-sc0001314-1491911889:32120..32850Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:32120..32850TCONS_00035456-exon-sc0001314-1510915933:32120..32850Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:32120..32850TCONS_00035456-exon-sc0001314-1575043694:32120..32850Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:33325..33472TCONS_00035456-exon-sc0001314-1491911889:33325..33472Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:33325..33472TCONS_00035456-exon-sc0001314-1510915933:33325..33472Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:33325..33472TCONS_00035456-exon-sc0001314-1575043694:33325..33472Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:33787..33843TCONS_00035456-exon-sc0001314-1491911889:33787..33843Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:33787..33843TCONS_00035456-exon-sc0001314-1510915933:33787..33843Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:33787..33843TCONS_00035456-exon-sc0001314-1575043694:33787..33843Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:34280..34463TCONS_00035456-exon-sc0001314-1491911889:34280..34463Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:34280..34463TCONS_00035456-exon-sc0001314-1510915933:34280..34463Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:34280..34463TCONS_00035456-exon-sc0001314-1575043694:34280..34463Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1491911889:35565..36657TCONS_00035456-exon-sc0001314-1491911889:35565..36657Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1510915933:35565..36657TCONS_00035456-exon-sc0001314-1510915933:35565..36657Clytia hemisphaericaexon
TCONS_00035456-exon-sc0001314-1575043694:35565..36657TCONS_00035456-exon-sc0001314-1575043694:35565..36657Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001314supercontigsc0001314:27062..36657 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.96134	4.43464	6.83549	6.19599	0.25642	0.168856	0.0407434	0.32422	0.373872	0.360069	0.112374	0.189952	10.6963	7.61707	0.224938	0.0482786	5.2814	3.85268	14.7216	14.0415	8.08906	8.92234	5.43004	7.79618	6.82199	8.95809	41.2164	31.0484	1.00246	0.967598
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
Blast
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BLAST of TCONS_00035456 vs. Swiss-Prot (Human)
Match: ASIC1 (Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC1 PE=1 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 6.201e-55
Identity = 134/467 (28.69%), Postives = 227/467 (48.61%), Query Frame = 1 
Query:  253 KTEEELRKEKVKEHVSDLIDNSSLHGLSYIFD-KRHPIRRVIWFFITTSAFIYSMLKVYESTEYYLSYPFTTARMRQYVDSIEFPAVSFCNINDMRISILNGTNV----DIAILTNN----PGNVTAEEY-------RSTTRS--------------AAHDITEMLVDCNFNGMKCTAKNFTEFFWKQGDRCFTFNSGKQG-PVLKVTGTGVERSLTLTINLQHFDYY-------RDSMVSGIHMILHGQDETP-VKIRGPMISPGYTSFIKVEKKKILNLKSPYKTNCGEL----DLKYFNGYSMHTCWLEKLTDYVVKHCNCKDFFMPGNHSICDLGTAYTCMWPKWE---EYDKNKLANCPLPCEIDSFHSETISRALFPSEQYAHKLKKILEKEPHMKNVVIKNVKQFMRDNLLRVVIYYDDMSYERVEQQPSYDTLEWLGDVGGQIGLFIGAGAMSYFEFVD 1515
            K EEE         +     +S+LHGL++IF  +R  ++R +W      +    +    E  +YY  Y   T         + FPAV+ CN+N+ R S ++  ++    ++  L NN    P    A+E        ++  RS              A HDI +ML+ C+F G  C+A++F   F + G +C+TFNSG+ G P LK    G    L + +++Q  +Y          S  +GI + +H QDE P +   G  ++PG+ +F+  ++++++ L  P+ T C  +    DL +F+ YS+  C ++  T Y+V++CNC+   MPG+   C       C  P  +   E D+     C +PC +  +  E +S    PS+  A  L K   K            +Q++ +N+L + I+++ ++YE +EQ+ +Y+    LGD+GGQ+GLFIGA  ++  E  D
Sbjct:    4 KAEEEEVGGVQPVSIQAFASSSTLHGLAHIFSYERLSLKRALWALCFLGSLAVLLCVCTERVQYYFHYHHVTKLDEVAASQLTFPAVTLCNLNEFRFSQVSKNDLYHAGELLALLNNRYEIPDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLSCHFRGEVCSAEDFKVVFTRYG-KCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVACQEQRLIYLPPPWGT-CKAVTMDSDLDFFDSYSITACRIDCETRYLVENCNCRMVHMPGDAPYCTPEQYKECADPALDFLVEKDQEYCV-CEMPCNLTRYGKE-LSMVKIPSKASAKYLAKKFNKS-----------EQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFD 455
The following BLAST results are available for this feature:
BLAST of TCONS_00035456 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC16.201e-5528.69Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC... [more]
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