TCONS_00035454 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035454
Unique NameTCONS_00035454
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2360

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035454 ID=TCONS_00035454|Name=TCONS_00035454|organism=Clytia hemisphaerica|type=transcript|length=2360bp
CATGGCCGTGAATGtaaagtggctctgggtacgagattgaatcatagatA
TTTTGATGGAAAAGGGGCAAATGTTTGGCATCAATTGAACTTGAAAGACT
TTTAACTTGCCGAATCCAGGGCCATTATGTTGAATTTCCAAGATATTGCA
AAGATTACTGTGGAAGCTGTACAAGAAAATCAAGAAGATGAAGCAAGTAG
TCCAATAAGACGTCGTAAAACCAAGAAAGAGCTTCGAAATGAAGAAGTCA
GCCAACACGTTCAAGATCTTATCGATACCACATCATTTCATGGCATATCA
TATATCTTCGATAAAAGACACCCCATACGTCGAGTCATTTGGTTTTTCAT
CACTACATCAGCTTTTATATACTCCATGTTGAAAGTCTACGAAAGTACCG
TTGAACATTTTTCCTATCCATTTAGTACAGCACGCATGCGTCAATATGTG
GATAGCATTGATTTCCCAGCTGTTTCGTTCTGTAATGTCAATGACATGCG
GATGAGTGTATTAAACGGAACGAATGTGGATCAAGCTGTTTTATCCGGTG
AAGCGTCCGGCGTTAATGGAACGGAGTACGTCCGACTAAAAAGACTTTCC
GCACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGATGGTCAGAA
ATGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGGTGATCAAT
GCTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAACGGTGTCG
GGACCAGGTAAAAGACGGAGCTTGATTTTAACACTTGATATACAACATTA
TGATTANGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAATCGATG
AAATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTAAAAAC
TTTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAATTC
TGGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGAAAAAGAC
GGAGCTTGATTTTAACACTTGATATACAACATTATGATTATTACCGCGGT
GGTTTGAAAGGTGGAATACATCTGATTTTACATGGCCAAGGAGAAACACC
AGTCAGGATGAGAGGTGAGATGATTTCACCAGGCTATTCAACTTACATCC
AAGTTGAGAAGAAAAAGATTATCAATCTTAAACCACCATTCAAGACAAAG
TGCGGTtctttgaaattgaaacatttttcacaaTACTCCAAAAGCACGTG
CTGGTTAGAACAACTAACGAATTACGTCACTGAGAAATGTAATTGCAAGG
ATGCTTTCATGCCTGGAGATTTTCGTGTGTGTTCTTTTGAAGAAAGCGCC
TTATGCATGTGGATGAATTGGGAGCattttgacaacaagaaattatACAA
TTGTCCATTATCATGTGAGATTGATTCGTACAGTGGAAAGACCATCTCTA
GATCATTGTTTCCCACTGAACAGTATGCCAAAGTGTTGAaagaaaagctg
aaaaatgaaaaacatttacaGAAAGTCGACATGGGCGATGCAACAAAATT
TATGAGGGACAACTTATTGCGAGTGGTGATTTACTATGATAACATGTCGT
ACGAACTGTTGGAGCAAGTCCCAAGTTACGATACATTAGAATGGCTTGGT
GACGTTGGCGGACAAATTGGATTATTCATTGGTGCTGGAGCGATGtcata
ttttgaagtcattgATGCTCTTGCGTTAGTTGTCTTTGCAAGGTTCTTCA
AAAGATTTACTGATGAAGATTTAGACGATTATGAAGCTTGATTGCTGTTG
CATTTTTGTGTGGTTGAAGCAGAGAAACACTTTGctttatctgatattct
gatggcgtattggtggccgcccacgctaaagctctaaaagagCAAACCTA
TATATGGTTAAAATATGCCTGACCTTCAGAACGCAAAGtgtgtcgtagca
tatttccataTCTGATGCCAGATAACACTTTGCTGTGCCACAAAGGTATC
TGGTGTGCCAACTTCCTTCCTGGAGAAGTTAATCAATAAATCATTTCCGT
TATACTTGAATAACATTCAAATTGAGAAAATTAACATTTTGAGGCTGACT
TTTCTACCAAATTCATATCAAAAAGCGATTTCTCAATTCTTAAAGGCTAC
TACAACGGAATAACGCTTTTATGATGCTGCAGACTTTTTTCCTGATGTGG
TTAAGAGATATTGGACATACATGAATTTCCAGGATAACACCCCTTCCTAG
CATTCGTAGGTAGATGATTAAACCCACAGGATTTTGAATATCCtgtaaat
atttatatttgagTGTTCAATGCCACTGTATAGGTACTGCCagttcccgg
gggggggggg
Run BLAST on NCBI

protein sequence of TCONS_00035454-protein

>TCONS_00035454-protein ID=TCONS_00035454-protein|Name=TCONS_00035454-protein|organism=Clytia hemisphaerica|type=polypeptide|length=554bp
MLNFQDIAKITVEAVQENQEDEASSPIRRRKTKKELRNEEVSQHVQDLID
TTSFHGISYIFDKRHPIRRVIWFFITTSAFIYSMLKVYESTVEHFSYPFS
TARMRQYVDSIDFPAVSFCNVNDMRMSVLNGTNVDQAVLSGEASGVNGTE
YVRLKRLSAHEIDEMLIDCEFDGQKCSTKNFTQFYAKQGDQCYSFNSGKP
GHPLQTVSGPGKRRSLILTLDIQHYDXEYVRLKRLSAHEIDEMLIDCEFD
GQKCSTKNFTQFYAKQGDQCYSFNSGKPGHPLQTVSGPGKRRSLILTLDI
QHYDYYRGGLKGGIHLILHGQGETPVRMRGEMISPGYSTYIQVEKKKIIN
LKPPFKTKCGSLKLKHFSQYSKSTCWLEQLTNYVTEKCNCKDAFMPGDFR
VCSFEESALCMWMNWEHFDNKKLYNCPLSCEIDSYSGKTISRSLFPTEQY
AKVLKEKLKNEKHLQKVDMGDATKFMRDNLLRVVIYYDNMSYELLEQVPS
YDTLEWLGDVGGQIGLFIGAGAMSYFEVIDALALVVFARFFKRFTDEDLD
DYEA
Run BLAST on NCBI

transcript from alignment at sc0001314:14293..21749+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035454 ID=TCONS_00035454|Name=TCONS_00035454|organism=Clytia hemisphaerica|type=transcript|length=7457bp|location=Sequence derived from alignment at sc0001314:14293..21749+ (Clytia hemisphaerica)
CATGGCCGTGAATGtaaagtggctctgggtacgagattgaatcatagatA
TTTTGATGGTATATCTTTTTTTATGCGGAATATCAACTCAGATTATTCAA
GAATTTGAAAATAGGTTGATTCTTCTTTGACTTTCATTACAAAGTGATCT
CAATTTCATGAGGTtcatgtttttgtttaaaaaaaatttctttaaaaaag
catGTCTTCAGTTTTTCACCATTTACGAGATTCTCACTATCATTGTGTTT
TTTAAACACCCCTGGCTAAAAGCCTCGGAGGAGCTTCATCCCACAGTTGG
GatatgaaaatttctattgaaattccGATGATGGGactagaaattatatt
gttccaagctcAAAAGTGGgaattttttccattgaatttcgaatgggaat
GAAGTTAAAGTCAATTTCCTAGTGGGACTGATACTGCAATGTATTTTTTC
CAACGAAGGTAAATTTTTTGCCCGAATTCTCTAGTGCAGAGTGGGGTCCC
AACGGGTCTGATACACTAGGGAGTTTTAATTCTAATATTTATTTTGATCC
AAAATTAACAttggccaatttttcaaaatcaactgtATCAAACAGCATTC
AGAAAAGTGACAAAGCTCGGTTAGAATTTTGGGTAGACGTGGAAGTAGGT
TATGCATCTCTTTGAAAGTGTCAGAACATGAACGTAATACACATATGTTC
TTAAATGAACGAAAAAAGAACACTCACTAATGATTAAAAGAGACCGCTGT
AATCAATATCCGTATTTATTTATCATTAACTTAATACCGTAAGCCCATTA
ACTGATTAATTGAACATTATATGATTTAATGATTTCCTCTGTAATGGATA
AGTCCTATTATAAAGTCCTAAAGGTCATTCATCACACAGATAAGACCAAA
TGGGTAATACGTAGATATCGCGCTAAGTTGAGCCGGCCCTCTCTTTCTAC
TTAATTTAACATATAATATCAAATGcgattttcattaaaagtttaaGCAA
CGAGTGAAAGCTACAAAAATGTGGTATTTCCATTTAAATGTACATGAtct
ctttttatatttttttctttaccttaaaaaaactcatttgCTATTTTTGT
TGGTCAGGAAAAGGGGCAAATGTTTGGCATCAATTGAACTTGAAAGACTT
TTAACTTGCCGAATCCAGGGCCATTATGTTGAATTTCCAAGATATTGCAA
AGATTACTGTGGAAGCTGTACAAGAAAATCAAGAAGGTAAACTGAAATCT
GAGCTCTGCTCCCAATATCTGCATCAGACACACCTAATTTTGACTAAAAT
GAAGTCACTGTGAAATTAAAAAGGTTGTCTCTCTATTTCTTAGCGAAGCG
TAACTTTTTTAAGTCTCTGTGCTTTCTACTCTTACAATTTTTCGGCCATA
GATTGCATTCAGTAGAGCTCATTTGTTAGATGAAGCTTAAACAGACATTT
GTGTGAATGcggaaaacttttaaaaaggcTGTGNTATTATAGATGAAGCT
TAAACAGACATTTGTGTGAATGcggaaaacttttaaaaaggcTGCGTGAA
TCCGTAAATTGAAAACTTTGTGTGAACAAAActtgcgtgaattgcgaaaa
aattgCATTCAGCGTGAATTTGGAAGAAAATATTGCGTCATTGCGTTGAA
TTGAAGGTCAgctgggggggggctcttttATGCCTTTAGGTAGTGTAGAT
TCGTGCAGTCTAGAAGGTAAATggataattaaaaataaaagaaaataacc
GACATTCCAATAGACTGAACGTTGTGTCAAAGTTTGTTTGTAGAAACGGT
ATCAAAAAGGGCTGTCTTGTTATTTCTAAGCTAAATAATATAATCAGAAG
GAGAATCATTAATTTTCAAGCTGTTTTTTAAATGCTGGTTGTATGCCATT
ATATACCAGCGTGGTGTTGTGATTATGAATGTCTGAATAAGAAGTCGGAG
GTAGGATATTCCGGTTAAGCTAAAGGAGTACTTCCTTTGGAATCTAAACA
CCGAATTTTGTAAGATCTAAATGACTTTTGATAATAAGTATTTGATTGAG
GATCGATTATAGGTCCCTCTCCGTTTTGTCAGAAAGCAGGCGAAAGataa
gttaaaattttcttacaCGATTTGGGTTTGTCATCGCAGAAATTCTCAAA
TGCGTCGGAGAGTATTTAATAGGAGTTAGACTACTGATTATAGTTGTTGA
AAAATGAGTTTTGATACTTACGATAATTTAGAATGTCACCTCATTGACGA
TACTGCAAACAGTAAGTATTAGTAAAATGGTGacttaaaggcttggggac
acgagaaattgtttttcgcgttggtgcaatgcaacatgctctatcccacc
aatGCAAGAATAAAGCTCGTGTCctttggtttctttttttgtttcaagga
ACAAAAAGTGTGGGAAATTTTTGAATCAATTTTGCCCATTGAGATTTCAC
TTTATTgtcagaaagaaaaatgggtTAGAGacaagcgtttcaggttggtg
ggatggaccatgttgcattgcaccaacgcgaaaaaaaacgtGTGTCTCCA
AGCCTTTAATACTATTGTAGGGAACACATGTGCTAAGAATACACTCATAG
ATCCGTGTAACGATTTTTGACAAGAAGCTTAAACTTCGGTTCAGAGTGAG
GTGAACTTtacaaagattttaaaaacatgtCGACGTTTAAAAAGCCTGCA
GTAAATTTACTTTTACTAGACTTCTAGTTAAGGCCTTTAATATTTTGTCG
AAATTTTGTCGAAGTTATAACTCGGATGTCTCCTGAGATTGAACAAATTT
TCTAATCCCTTTAGTTAACATTACTCTataaacccagctggcacacaacg
ttgtttcaacgtttatctaacgttcacaatgtccatttaacgttagatta
acgcgttgaaacaacgttgtgtgccagctggaaagCTTACCCCATATCTC
TAAATTTCATTATTTCGGACAAATTTGTTTTCCCCAAGCGTATTTGAGTT
ATGGAAACTTCACTGTATTTATTTGCATCTTTCACTTTAGATGAAGCAAG
TAGTCCAATAAGACGTCGTAAAACCAAGAAAGAGCTTCGAAATGAAGAAG
TCAGCCAACACGTTCAAGATCTTATCGATACCACATCATTTCATGGCATA
TCATATATCTTCGATAAAAGACACCCCATACGTCGAGTCATTTGGTTTTT
CATCACTACATCAGCTTTTATATACTCCATGTTGAAAGTCTACGAAAGTA
CCGTTGAACATTTTTCCTATCCATTTAGTACAGCACGCATGCGTCAATAT
GTGGATAGCATTGATTTCCCAGCTGTTTCGTTCTGTAATGTCAATGACAT
GCGGATGAGTGTATTAAACGGAACGAATGTGGATCAAGCTGTTTTATCCG
GTGAAGCGTCCGGCGTTAATGGAACGGAGTACGTCCGACTAAAAAGACTT
TCCGCACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGATGGTCA
GAAATGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGGTGATC
AATGCTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAACGGTG
TCGGGACCAGGTAAAAGACGGAGCTTGATTTTAACACTTGATATACAACA
TTATGATTANGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAATCG
ATGAAATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTAAA
AACTTTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAA
TTCTGGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGAAAAA
GACGGAGCTTGATTTTAACACTTGATATACAACATTATGATTATTACCGC
GGTGGTTTGAAAGGTGGAATACATCTGATTTTACATGGCCAAGGAGAAAC
ACCAGTCAGGATGAGAGGTGAGATGATTTCACCAGGCTATTCAACTTACA
TCCAAGTTGAGAAGAAAAAGGTAAGGAATTTGTTCAATACTGctttacat
ttttataagaataaactataagTACATAGGCTTCGacggccaaaaaatta
agaacaagttcagaacattttaatgcttAAATGTTTCATTTCTTAGATAT
GATCAAATAGAATAAAGCTCTTAACATGGGCACAAAAAGGGCTAACAATA
AAGCTTCACTTTATACtttatcgaaaaaattttccttcGTAGCCCTCCTT
TTAATTACCCTATTTGCACACTTggtatacagttgacgctcgtTTCATCA
ACtttctactatttgatacgctctattattcgattatgttgaaagtcacc
gtcaacaagaaactcttataaagGACGCTCTATTACTACGCttccttaca
cgttttttttataagaacaaactatataagaagaatgaccaaaatattga
gaacaagttaaagaacattttaaggctttgtggactccaaaacacctaat
ttctcaggaaaacggacaaaaatgctcagaaaatggcgaaaataagaaaa
tgttaagaacatttttaggcttcatactcaaaaagtttagaacatccgaa
ggcttcaaaaattttggatgttcttataaaaataacgtgtattcaatgaa
aatccaatgcccttgaagatcgaattagagagtgtcaattttatttaaat
ctaGATTtccgaatttgaaatttccacccttttAATCTCATAATTTCAGA
TTATCAATCTTAAACCACCATTCAAGACAAAGTGCGGTtctttgaaattg
aaacatttttcacaaTACTCCAAAAGCACGTGCTGGTTAGAACAACTAAC
GAATTACGTCACTGAGAAATGTAATTGCAAGGATGCTTTCATGCCTGGAG
ATTTTCGTGTGTGTTCTTTTGAAGAAAGCGCCTTATGCATGTGGATGAAT
TGGGGTAAGCAAACTGAACTCTAAAGAAACCTCGAATGAACGTGCATATT
TAAAGCGAATAGAATTAAAGTTCATTAGGCCGTGCAAGCTCGAGATATTT
CAACAATATGGTCAGACTCTCCATCAATCTCCTTAGACAATTTTTAGGCT
AGGGGAGTGTTTTGGTTTGAAAGATGTTTTGGGACACGCAATTATTTTAT
TCTACCGTTCATTTAACATTACATGGGCTGTAAAAATGGATTCATTTTAG
TTATGTGTCAACCTCGTTTCTGTGTATTCCCGGCTTTATTTAGGTTACCT
TTGAACACCATAGAATATTATCCAGTGCTATCAGTAAGgataaaaaagct
gaaaatacaGGGAACGAGATCAGTTCTGTGCAAGTTTGGCTTTTCATCTC
ATTTTATCCATTTTTCTCATTCAAACAGAGCattttgacaacaagaaatt
atACAATTGTCCATTATCATGTGAGATTGATTCGTACAGTGGAAAGACCA
TCTCTAGATCATTGTTTCCCACTGAACAGTATGCCAAAGTGTTGAaagaa
aagctgaaaaatgaaaaacatttacaGAAAGTCGACATGGGCGATGCAAC
AAAATTTATGAGGTATTAGATACATATTAGATAACTTTACTATATCCAAG
ATACTCTCTTTGATACCATCCATGTATATCATTGCTTTGTGTAcaaaaat
atcctcctatatctaaagaactaaaacaaaatttcgACTTCTGACCTTTA
AGCTCTGCTCTTTATTTCACCCTTTTTCGTCGATAGCAGGAGGCCTTAAA
ACTTAACATCATAGTGGCAAGGCCTTCAAACCCTTCAAAAGATCGAATAA
AAACACTTAGTAAACATTGTGACAATGCAAACTATTTCAATTCAGTGATC
ACTTCCACCCACTCATTAGTCGCCACATACCTTGAACGTTAGAAAACCAA
CTACTAAGTAGGGACAACGAGGCAAGCGGAAGTTGCCCTTAAGGGTGTCG
TTTTGGAACTTCAAAATCTCAAAGAAACGTAAAGATTACCTTGAAGTTAT
CTTTATAACCCTGAAAAGCCTAtttctaagaaaaaaataagggtcacaaa
atttacaaaaattcggGATTTTCCTCAATTTTAAAAAGCCTGTTTTAGTC
CGAAGGCATAAACCTGTCATTCTGCAATATCATTCTCCTGGCATAAGTTT
TATATCGGTGCAATTCTTGATTTGTTATTTTTAGGGACAACTTATTGCGA
GTGGTGATTTACTATGATAACATGTCGTACGAACTGTTGGAGCAAGTCCC
AAGTTACGATACATTAGAATGGCTTGGTAAGATTGTACTtactaaaagct
caaaaatgttccaataaggctgagaatatagccttccagccacttaaccc
ctcacaaatcaaaaattcaatgaAAGCGAAAGCACTAAAATCACGATTCT
TACCCGAACTTTTAGATTTTGAAGAACGTCAAAATACCTAAAATtgtcaa
taatatttttatgttgattgtagacgactaattcagacatagtaaaAAAT
CATATTATTTAGCAATatgaattttacattttaaactTTTACTTTGAGTT
CTAAAGGTACCATTCCTTGGAAAAGACTTGCCActataggcttctgctca
tcctctacgAAAAACGTttctatataggaagtatatctatagaggtctgc
gattcagacaaATTTGCCACCGATACTGATCaccagagacaggggtgtat
taacaAAATCCTTTTGATAACAGACTTTAAATTTTCTAACCAAAGGTGAC
GTTGGCGGACAAATTGGATTATTCATTGGTGCTGGAGCGATGtcatattt
tgaagtcattgATGCTCTTGCGTTAGTTGTCTTTGCAAGGTTCTTCAAAA
GATTTACTGATGAAGATTTAGACGATTATGAAGCTTGATTGCTGTTGCAT
TTTTGTGTGGTTGAAGCAGAGAAACACTTTGctttatctgatattctgat
ggcgtattggtggccgcccacgctaaagctctaaaagagCAAACCTATAT
ATGGTTAAAATATGCCTGACCTTCAGAACGCAAAGtgtgtcgtagcatat
ttccataTCTGATGCCAGATAACACTTTGCTGTGCCACAAAGGTATCTGG
TGTGCCAACTTCCTTCCTGGAGAAGTTAATCAATAAATCATTTCCGTTAT
ACTTGAATAACATTCAAATTGAGAAAATTAACATTTTGAGGCTGACTTTT
CTACCAAATTCATATCAAAAAGCGATTTCTCAATTCTTAAAGGCTACTAC
AACGGAATAACGCTTTTATGATGCTGCAGACTTTTTTCCTGATGTGGTTA
AGAGATATTGGACATACATGAATTTCCAGGATAACACCCCTTCCTAGCAT
TCGTAGGTAGATGATTAAACCCACAGGATTTTGAATATCCtgtaaatatt
tatatttgagTGTTCAATGCCACTGTATAGGTACTGCCagttcccggggg
ggggggg

Coding sequence (CDS) from alignment at sc0001314:14293..21749+

>TCONS_00035454 ID=TCONS_00035454|Name=TCONS_00035454|organism=Clytia hemisphaerica|type=CDS|length=9990bp|location=Sequence derived from alignment at sc0001314:14293..21749+ (Clytia hemisphaerica)
ATGTTGAATTTCCAAGATATTGCAAAGATTACTGTGGAAGCTGTACAAGA
AAATCAAGAAGATGAAGCAAGTAGTCCAATAAGACGTCGTAAAACCAAGA
AAGAGCTTCGAAATGAAGAAGTCAGCCAACACGTTCAAGATCTTATCGAT
ACCACATCATTTCATGGCATATCATATATCTTCGATAAAAGACACCCCAT
ACGTCGAGTCATTTGGTTTTTCATCACTACATCAGCTTTTATATACTCCA
TGTTGAAAGTCTACGAAAGTACCGTTGAACATTTTTCCTATCCATTTAGT
ACAGCACGCATGCGTCAATATGTGGATAGCATTGATTTCCCAGCTGTTTC
GTTCTGTAATGTCAATGACATGCGGATGAGTGTATTAAACGGAACGAATG
TGGATCAAGCTGTTTTATCCGGTGAAGCGTCCGGCGTTAATGGAACGGAG
TACGTCCGACTAAAAAGACTTTCCGCACACGAAATCGATGAAATGTTGAT
TGATTGTGAATTTGATGGTCAGAAATGTTCCACTAAAAACTTTACGCAAT
TTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAATTCTGGTAAACCT
GGGCACCCACTACAAACGGTGTCGGGACCAGGTAAAAGACGGAGCTTGAT
TTTAACACTTGATATACAACATTATGATTANGAGTACGTCCGACTAAAAA
GACTTTCCGCACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGAT
GGTCAGAAATGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGG
TGATCAATGCTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAA
CGGTGTCGGGACCAGGAAAAAGACGGAGCTTGATTTTAACACTTGATATA
CAACATTATGATTATTACCGCGGTGGTTTGAAAGGTGGAATACATCTGAT
TTTACATGGCCAAGGAGAAACACCAGTCAGGATGAGAGGTGAGATGATTT
CACCAGGCTATTCAACTTACATCCAAGTTGAGAAGAAAAAGATTATCAAT
CTTAAACCACCATTCAAGACAAAGTGCGGTtctttgaaattgaaacattt
ttcacaaTACTCCAAAAGCACGTGCTGGTTAGAACAACTAACGAATTACG
TCACTGAGAAATGTAATTGCAAGGATGCTTTCATGCCTGGAGATTTTCGT
GTGTGTTCTTTTGAAGAAAGCGCCTTATGCATGTGGATGAATTGGGAGCa
ttttgacaacaagaaattatACAATTGTCCATTATCATGTGAGATTGATT
CGTACAGTGGAAAGACCATCTCTAGATCATTGTTTCCCACTGAACAGTAT
GCCAAAGTGTTGAaagaaaagctgaaaaatgaaaaacatttacaGAAAGT
CGACATGGGCGATGCAACAAAATTTATGAGGGACAACTTATTGCGAGTGG
TGATTTACTATGATAACATGTCGTACGAACTGTTGGAGCAAGTCCCAAGT
TACGATACATTAGAATGGCTTGGTGACGTTGGCGGACAAATTGGATTATT
CATTGGTGCTGGAGCGATGtcatattttgaagtcattgATGCTCTTGCGT
TAGTTGTCTTTGCAAGGTTCTTCAAAAGATTTACTGATGAAGATTTAGAC
GATTATGAAGCTTGAATGTTGAATTTCCAAGATATTGCAAAGATTACTGT
GGAAGCTGTACAAGAAAATCAAGAAGATGAAGCAAGTAGTCCAATAAGAC
GTCGTAAAACCAAGAAAGAGCTTCGAAATGAAGAAGTCAGCCAACACGTT
CAAGATCTTATCGATACCACATCATTTCATGGCATATCATATATCTTCGA
TAAAAGACACCCCATACGTCGAGTCATTTGGTTTTTCATCACTACATCAG
CTTTTATATACTCCATGTTGAAAGTCTACGAAAGTACCGTTGAACATTTT
TCCTATCCATTTAGTACAGCACGCATGCGTCAATATGTGGATAGCATTGA
TTTCCCAGCTGTTTCGTTCTGTAATGTCAATGACATGCGGATGAGTGTAT
TAAACGGAACGAATGTGGATCAAGCTGTTTTATCCGGTGAAGCGTCCGGC
GTTAATGGAACGGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAAT
CGATGAAATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTA
AAAACTTTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTC
AATTCTGGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGTAA
AAGACGGAGCTTGATTTTAACACTTGATATACAACATTATGATTANGAGT
ACGTCCGACTAAAAAGACTTTCCGCACACGAAATCGATGAAATGTTGATT
GATTGTGAATTTGATGGTCAGAAATGTTCCACTAAAAACTTTACGCAATT
TTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAATTCTGGTAAACCTG
GGCACCCACTACAAACGGTGTCGGGACCAGGAAAAAGACGGAGCTTGATT
TTAACACTTGATATACAACATTATGATTATTACCGCGGTGGTTTGAAAGG
TGGAATACATCTGATTTTACATGGCCAAGGAGAAACACCAGTCAGGATGA
GAGGTGAGATGATTTCACCAGGCTATTCAACTTACATCCAAGTTGAGAAG
AAAAAGATTATCAATCTTAAACCACCATTCAAGACAAAGTGCGGTtcttt
gaaattgaaacatttttcacaaTACTCCAAAAGCACGTGCTGGTTAGAAC
AACTAACGAATTACGTCACTGAGAAATGTAATTGCAAGGATGCTTTCATG
CCTGGAGATTTTCGTGTGTGTTCTTTTGAAGAAAGCGCCTTATGCATGTG
GATGAATTGGGAGCattttgacaacaagaaattatACAATTGTCCATTAT
CATGTGAGATTGATTCGTACAGTGGAAAGACCATCTCTAGATCATTGTTT
CCCACTGAACAGTATGCCAAAGTGTTGAaagaaaagctgaaaaatgaaaa
acatttacaGAAAGTCGACATGGGCGATGCAACAAAATTTATGAGGGACA
ACTTATTGCGAGTGGTGATTTACTATGATAACATGTCGTACGAACTGTTG
GAGCAAGTCCCAAGTTACGATACATTAGAATGGCTTGGTGACGTTGGCGG
ACAAATTGGATTATTCATTGGTGCTGGAGCGATGtcatattttgaagtca
ttgATGCTCTTGCGTTAGTTGTCTTTGCAAGGTTCTTCAAAAGATTTACT
GATGAAGATTTAGACGATTATGAAGCTTGAATGTTGAATTTCCAAGATAT
TGCAAAGATTACTGTGGAAGCTGTACAAGAAAATCAAGAAGATGAAGCAA
GTAGTCCAATAAGACGTCGTAAAACCAAGAAAGAGCTTCGAAATGAAGAA
GTCAGCCAACACGTTCAAGATCTTATCGATACCACATCATTTCATGGCAT
ATCATATATCTTCGATAAAAGACACCCCATACGTCGAGTCATTTGGTTTT
TCATCACTACATCAGCTTTTATATACTCCATGTTGAAAGTCTACGAAAGT
ACCGTTGAACATTTTTCCTATCCATTTAGTACAGCACGCATGCGTCAATA
TGTGGATAGCATTGATTTCCCAGCTGTTTCGTTCTGTAATGTCAATGACA
TGCGGATGAGTGTATTAAACGGAACGAATGTGGATCAAGCTGTTTTATCC
GGTGAAGCGTCCGGCGTTAATGGAACGGAGTACGTCCGACTAAAAAGACT
TTCCGCACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGATGGTC
AGAAATGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGGTGAT
CAATGCTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAACGGT
GTCGGGACCAGGTAAAAGACGGAGCTTGATTTTAACACTTGATATACAAC
ATTATGATTANGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAATC
GATGAAATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTAA
AAACTTTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCA
ATTCTGGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGAAAA
AGACGGAGCTTGATTTTAACACTTGATATACAACATTATGATTATTACCG
CGGTGGTTTGAAAGGTGGAATACATCTGATTTTACATGGCCAAGGAGAAA
CACCAGTCAGGATGAGAGGTGAGATGATTTCACCAGGCTATTCAACTTAC
ATCCAAGTTGAGAAGAAAAAGATTATCAATCTTAAACCACCATTCAAGAC
AAAGTGCGGTtctttgaaattgaaacatttttcacaaTACTCCAAAAGCA
CGTGCTGGTTAGAACAACTAACGAATTACGTCACTGAGAAATGTAATTGC
AAGGATGCTTTCATGCCTGGAGATTTTCGTGTGTGTTCTTTTGAAGAAAG
CGCCTTATGCATGTGGATGAATTGGGAGCattttgacaacaagaaattat
ACAATTGTCCATTATCATGTGAGATTGATTCGTACAGTGGAAAGACCATC
TCTAGATCATTGTTTCCCACTGAACAGTATGCCAAAGTGTTGAaagaaaa
gctgaaaaatgaaaaacatttacaGAAAGTCGACATGGGCGATGCAACAA
AATTTATGAGGGACAACTTATTGCGAGTGGTGATTTACTATGATAACATG
TCGTACGAACTGTTGGAGCAAGTCCCAAGTTACGATACATTAGAATGGCT
TGGTGACGTTGGCGGACAAATTGGATTATTCATTGGTGCTGGAGCGATGt
catattttgaagtcattgATGCTCTTGCGTTAGTTGTCTTTGCAAGGTTC
TTCAAAAGATTTACTGATGAAGATTTAGACGATTATGAAGCTTGAATGTT
GAATTTCCAAGATATTGCAAAGATTACTGTGGAAGCTGTACAAGAAAATC
AAGAAGATGAAGCAAGTAGTCCAATAAGACGTCGTAAAACCAAGAAAGAG
CTTCGAAATGAAGAAGTCAGCCAACACGTTCAAGATCTTATCGATACCAC
ATCATTTCATGGCATATCATATATCTTCGATAAAAGACACCCCATACGTC
GAGTCATTTGGTTTTTCATCACTACATCAGCTTTTATATACTCCATGTTG
AAAGTCTACGAAAGTACCGTTGAACATTTTTCCTATCCATTTAGTACAGC
ACGCATGCGTCAATATGTGGATAGCATTGATTTCCCAGCTGTTTCGTTCT
GTAATGTCAATGACATGCGGATGAGTGTATTAAACGGAACGAATGTGGAT
CAAGCTGTTTTATCCGGTGAAGCGTCCGGCGTTAATGGAACGGAGTACGT
CCGACTAAAAAGACTTTCCGCACACGAAATCGATGAAATGTTGATTGATT
GTGAATTTGATGGTCAGAAATGTTCCACTAAAAACTTTACGCAATTTTAC
GCTAAGCAGGGTGATCAATGCTATAGTTTCAATTCTGGTAAACCTGGGCA
CCCACTACAAACGGTGTCGGGACCAGGTAAAAGACGGAGCTTGATTTTAA
CACTTGATATACAACATTATGATTANGAGTACGTCCGACTAAAAAGACTT
TCCGCACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGATGGTCA
GAAATGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGGTGATC
AATGCTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAACGGTG
TCGGGACCAGGAAAAAGACGGAGCTTGATTTTAACACTTGATATACAACA
TTATGATTATTACCGCGGTGGTTTGAAAGGTGGAATACATCTGATTTTAC
ATGGCCAAGGAGAAACACCAGTCAGGATGAGAGGTGAGATGATTTCACCA
GGCTATTCAACTTACATCCAAGTTGAGAAGAAAAAGATTATCAATCTTAA
ACCACCATTCAAGACAAAGTGCGGTtctttgaaattgaaacatttttcac
aaTACTCCAAAAGCACGTGCTGGTTAGAACAACTAACGAATTACGTCACT
GAGAAATGTAATTGCAAGGATGCTTTCATGCCTGGAGATTTTCGTGTGTG
TTCTTTTGAAGAAAGCGCCTTATGCATGTGGATGAATTGGGAGCattttg
acaacaagaaattatACAATTGTCCATTATCATGTGAGATTGATTCGTAC
AGTGGAAAGACCATCTCTAGATCATTGTTTCCCACTGAACAGTATGCCAA
AGTGTTGAaagaaaagctgaaaaatgaaaaacatttacaGAAAGTCGACA
TGGGCGATGCAACAAAATTTATGAGGGACAACTTATTGCGAGTGGTGATT
TACTATGATAACATGTCGTACGAACTGTTGGAGCAAGTCCCAAGTTACGA
TACATTAGAATGGCTTGGTGACGTTGGCGGACAAATTGGATTATTCATTG
GTGCTGGAGCGATGtcatattttgaagtcattgATGCTCTTGCGTTAGTT
GTCTTTGCAAGGTTCTTCAAAAGATTTACTGATGAAGATTTAGACGATTA
TGAAGCTTGAATGTTGAATTTCCAAGATATTGCAAAGATTACTGTGGAAG
CTGTACAAGAAAATCAAGAAGATGAAGCAAGTAGTCCAATAAGACGTCGT
AAAACCAAGAAAGAGCTTCGAAATGAAGAAGTCAGCCAACACGTTCAAGA
TCTTATCGATACCACATCATTTCATGGCATATCATATATCTTCGATAAAA
GACACCCCATACGTCGAGTCATTTGGTTTTTCATCACTACATCAGCTTTT
ATATACTCCATGTTGAAAGTCTACGAAAGTACCGTTGAACATTTTTCCTA
TCCATTTAGTACAGCACGCATGCGTCAATATGTGGATAGCATTGATTTCC
CAGCTGTTTCGTTCTGTAATGTCAATGACATGCGGATGAGTGTATTAAAC
GGAACGAATGTGGATCAAGCTGTTTTATCCGGTGAAGCGTCCGGCGTTAA
TGGAACGGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAATCGATG
AAATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTAAAAAC
TTTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAATTC
TGGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGTAAAAGAC
GGAGCTTGATTTTAACACTTGATATACAACATTATGATTANGAGTACGTC
CGACTAAAAAGACTTTCCGCACACGAAATCGATGAAATGTTGATTGATTG
TGAATTTGATGGTCAGAAATGTTCCACTAAAAACTTTACGCAATTTTACG
CTAAGCAGGGTGATCAATGCTATAGTTTCAATTCTGGTAAACCTGGGCAC
CCACTACAAACGGTGTCGGGACCAGGAAAAAGACGGAGCTTGATTTTAAC
ACTTGATATACAACATTATGATTATTACCGCGGTGGTTTGAAAGGTGGAA
TACATCTGATTTTACATGGCCAAGGAGAAACACCAGTCAGGATGAGAGGT
GAGATGATTTCACCAGGCTATTCAACTTACATCCAAGTTGAGAAGAAAAA
GATTATCAATCTTAAACCACCATTCAAGACAAAGTGCGGTtctttgaaat
tgaaacatttttcacaaTACTCCAAAAGCACGTGCTGGTTAGAACAACTA
ACGAATTACGTCACTGAGAAATGTAATTGCAAGGATGCTTTCATGCCTGG
AGATTTTCGTGTGTGTTCTTTTGAAGAAAGCGCCTTATGCATGTGGATGA
ATTGGGAGCattttgacaacaagaaattatACAATTGTCCATTATCATGT
GAGATTGATTCGTACAGTGGAAAGACCATCTCTAGATCATTGTTTCCCAC
TGAACAGTATGCCAAAGTGTTGAaagaaaagctgaaaaatgaaaaacatt
tacaGAAAGTCGACATGGGCGATGCAACAAAATTTATGAGGGACAACTTA
TTGCGAGTGGTGATTTACTATGATAACATGTCGTACGAACTGTTGGAGCA
AGTCCCAAGTTACGATACATTAGAATGGCTTGGTGACGTTGGCGGACAAA
TTGGATTATTCATTGGTGCTGGAGCGATGtcatattttgaagtcattgAT
GCTCTTGCGTTAGTTGTCTTTGCAAGGTTCTTCAAAAGATTTACTGATGA
AGATTTAGACGATTATGAAGCTTGAATGTTGAATTTCCAAGATATTGCAA
AGATTACTGTGGAAGCTGTACAAGAAAATCAAGAAGATGAAGCAAGTAGT
CCAATAAGACGTCGTAAAACCAAGAAAGAGCTTCGAAATGAAGAAGTCAG
CCAACACGTTCAAGATCTTATCGATACCACATCATTTCATGGCATATCAT
ATATCTTCGATAAAAGACACCCCATACGTCGAGTCATTTGGTTTTTCATC
ACTACATCAGCTTTTATATACTCCATGTTGAAAGTCTACGAAAGTACCGT
TGAACATTTTTCCTATCCATTTAGTACAGCACGCATGCGTCAATATGTGG
ATAGCATTGATTTCCCAGCTGTTTCGTTCTGTAATGTCAATGACATGCGG
ATGAGTGTATTAAACGGAACGAATGTGGATCAAGCTGTTTTATCCGGTGA
AGCGTCCGGCGTTAATGGAACGGAGTACGTCCGACTAAAAAGACTTTCCG
CACACGAAATCGATGAAATGTTGATTGATTGTGAATTTGATGGTCAGAAA
TGTTCCACTAAAAACTTTACGCAATTTTACGCTAAGCAGGGTGATCAATG
CTATAGTTTCAATTCTGGTAAACCTGGGCACCCACTACAAACGGTGTCGG
GACCAGGTAAAAGACGGAGCTTGATTTTAACACTTGATATACAACATTAT
GATTANGAGTACGTCCGACTAAAAAGACTTTCCGCACACGAAATCGATGA
AATGTTGATTGATTGTGAATTTGATGGTCAGAAATGTTCCACTAAAAACT
TTACGCAATTTTACGCTAAGCAGGGTGATCAATGCTATAGTTTCAATTCT
GGTAAACCTGGGCACCCACTACAAACGGTGTCGGGACCAGGAAAAAGACG
GAGCTTGATTTTAACACTTGATATACAACATTATGATTATTACCGCGGTG
GTTTGAAAGGTGGAATACATCTGATTTTACATGGCCAAGGAGAAACACCA
GTCAGGATGAGAGGTGAGATGATTTCACCAGGCTATTCAACTTACATCCA
AGTTGAGAAGAAAAAGATTATCAATCTTAAACCACCATTCAAGACAAAGT
GCGGTtctttgaaattgaaacatttttcacaaTACTCCAAAAGCACGTGC
TGGTTAGAACAACTAACGAATTACGTCACTGAGAAATGTAATTGCAAGGA
TGCTTTCATGCCTGGAGATTTTCGTGTGTGTTCTTTTGAAGAAAGCGCCT
TATGCATGTGGATGAATTGGGAGCattttgacaacaagaaattatACAAT
TGTCCATTATCATGTGAGATTGATTCGTACAGTGGAAAGACCATCTCTAG
ATCATTGTTTCCCACTGAACAGTATGCCAAAGTGTTGAaagaaaagctga
aaaatgaaaaacatttacaGAAAGTCGACATGGGCGATGCAACAAAATTT
ATGAGGGACAACTTATTGCGAGTGGTGATTTACTATGATAACATGTCGTA
CGAACTGTTGGAGCAAGTCCCAAGTTACGATACATTAGAATGGCTTGGTG
ACGTTGGCGGACAAATTGGATTATTCATTGGTGCTGGAGCGATGtcatat
tttgaagtcattgATGCTCTTGCGTTAGTTGTCTTTGCAAGGTTCTTCAA
AAGATTTACTGATGAAGATTTAGACGATTATGAAGCTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020726XLOC_020726Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035454-proteinTCONS_00035454-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035454-exon-sc0001314-1491911889:14293..14350TCONS_00035454-exon-sc0001314-1491911889:14293..14350Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:14293..14350TCONS_00035454-exon-sc0001314-1510915933:14293..14350Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:14293..14350TCONS_00035454-exon-sc0001314-1575043694:14293..14350Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:15400..15528TCONS_00035454-exon-sc0001314-1491911889:15400..15528Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:15400..15528TCONS_00035454-exon-sc0001314-1510915933:15400..15528Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:15400..15528TCONS_00035454-exon-sc0001314-1575043694:15400..15528Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:17333..18312TCONS_00035454-exon-sc0001314-1491911889:17333..18312Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:17333..18312TCONS_00035454-exon-sc0001314-1510915933:17333..18312Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:17333..18312TCONS_00035454-exon-sc0001314-1575043694:17333..18312Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:19042..19246TCONS_00035454-exon-sc0001314-1491911889:19042..19246Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:19042..19246TCONS_00035454-exon-sc0001314-1510915933:19042..19246Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:19042..19246TCONS_00035454-exon-sc0001314-1575043694:19042..19246Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:19671..19854TCONS_00035454-exon-sc0001314-1491911889:19671..19854Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:19671..19854TCONS_00035454-exon-sc0001314-1510915933:19671..19854Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:19671..19854TCONS_00035454-exon-sc0001314-1575043694:19671..19854Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:20477..20568TCONS_00035454-exon-sc0001314-1491911889:20477..20568Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:20477..20568TCONS_00035454-exon-sc0001314-1510915933:20477..20568Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:20477..20568TCONS_00035454-exon-sc0001314-1575043694:20477..20568Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1491911889:21038..21749TCONS_00035454-exon-sc0001314-1491911889:21038..21749Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1510915933:21038..21749TCONS_00035454-exon-sc0001314-1510915933:21038..21749Clytia hemisphaericaexon
TCONS_00035454-exon-sc0001314-1575043694:21038..21749TCONS_00035454-exon-sc0001314-1575043694:21038..21749Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001314supercontigsc0001314:14293..21749 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.152887	0.107247	0	0.384463	5.04215	5.8717	0	0	2.78244	2.6342	6.02531	6.3451	2.98208	3.45359	0.739806	0.962812	2.27204	2.71835	2.9627	0.774848	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
Blast
[Close]
BLAST of TCONS_00035454 vs. Swiss-Prot (Human)
Match: ASIC2 (Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC2 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.404e-45
Identity = 134/500 (26.80%), Postives = 224/500 (44.80%), Query Frame = 1 
Query:  259 VQDLIDTTSFHGISYIFD-KRHPIRRVIWFFITTSAFIYSMLKVYESTVEHFSYPFSTARMRQYVDSIDFPAVSFCNVNDMRMSVLNGTNVDQAVLSGEASGVNGTEYVRLKRLSAHEIDEMLIDCEFDGQKCSTKNFTQFYAKQGDQCYSFNSGKPGHPLQTVSGPGKRRSLILTLDIQHYDXEYVRLKRLSAHEIDEMLIDCEFDGQKCSTKNFTQFYAKQGDQCYSFNSGKPGHPLQTVSGPGKRRSLILTLDIQHYDYY-------RXXXXXXXXXXXXXXXETP-VRMRGEMISPGYSTYIQVEKKKIINLKPPF-KTKCGSLKLKHFSQYSKSTCWLEQLTNYVTEKCNCKDAFMPGDFRVCSFEESALC----MWMNWEHFDNKKLYNCPLSCEIDSYSGKTISRSLFPTEQYAKVLKEKLKNEKHLQKVDMGDATKFMRDNLLRVVIYYDNMSYELLEQVPSYDTLEWLGDVGGQIGLFIGAGAMSYFEVID 1716
            +Q   +T++ HGI +IF      IRRV+W      +    +++  E    +FSY   T        S+ FPAV+ CN+N  R S L   ++  A            E + L  ++    D  L D           NF  +  KQ                               L+  H             H++ +M++ C+F GQ+C  ++FT  + K G +CY FNSG+ G PL T    G    L + LDIQ  +Y            + G+ + +H Q E P ++  G  ++PG+ T++  +++++  L PP+ + +   + L  F  YS + C ++  T Y+ E CNC+   MPGD   C+ E+   C    + +  E   N  L  C   C +  Y+ K +S    P++  AK L++K    +           K++ +N+L + I+++ ++YE +EQ  +Y+    LGD+GGQ+GLFIGA  ++  E+ D
Sbjct:   17 IQIFANTSTLHGIRHIFVYGPLTIRRVLWAVAFVGSLGLLLVESSERVSYYFSYQHVTKVDEVVAQSLVFPAVTLCNLNGFRFSRLTTNDLYHA-----------GELLALLDVNLQIPDPHLADPSVLEALRQKANFKHYKPKQFSM----------------------------LEFLHR----------VGHDLKDMMLYCKFKGQECGHQDFTTVFTKYG-KCYMFNSGEDGKPLLTTVKGGTGNGLEIMLDIQQDEYLPIWGETEETTFEAGVKVQIHSQSEPPFIQELGFGVAPGFQTFVATQEQRLTYLPPPWGECRSSEMGLDFFPVYSITACRIDCETRYIVENCNCRMVHMPGDAPFCTPEQHKECAEPALGLLAEKDSNYCL--CRTPCNLTRYN-KELSMVKIPSKTSAKYLEKKFNKSE-----------KYISENILVLDIFFEALNYETIEQKKAYEVAALLGDIGGQMGLFIGASILTILELFD 452
The following BLAST results are available for this feature:
BLAST of TCONS_00035454 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC21.404e-4526.80Acid-sensing ion channel 2 OS=Homo sapiens GN=ASIC... [more]
back to top