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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00035289 ID=TCONS_00035289|Name=TCONS_00035289|organism=Clytia hemisphaerica|type=transcript|length=2593bp
CCTTAATgaaagatcaaagagaaaagctaatGAGCAATAATAATAGAGAA
TTGTACAAAGAGTTTGACAACCAGTGGTTTATTTCAAACAGTAAAATTTA
TCATGTCTCTTGCCCAAAAGAAAGTGATGATTTTATTGGTGATGAAGAGG
CATTTTTTGCATCACTTGAAATCGAAAAGACAGATTTAAATGCAGTTAAA
TCACTATTGAATTCTGTTGATATAGCATCATGGCATCGCCATACTTCCAA
CATGCACAAATTTTCAAGCGTACCGTACAAGCTACGAACACAACTCAAAG
TGGAGCTACCAACCCAAGCATGGGCCAAATTCTACTCCATTCTTGGAACA
TTTGAGATCATTCCAAAAGAATGTATAGAGAATCGTTATCTAAAATCGTT
TCATCTTTGCGAAGCTCCTGGAGCTTTTATTGCATCACTGAACCATTTTA
TCCAAAACAGATTTGGATATAATTTCAAGTTAGACTGGTGTAGTACAACT
TTGAATCCATATTATGAAGGGAACGACCTCGGTCACATGATACCAGATGA
CCGCTTCATGATAAATACACTTGATCGCTGGGATTTTTGTCCAGACTTAA
CTGGAAATATCAAGAATCCaaacaatttcaaatattttgttgaTAAAATG
GGCCAacagaaaataaatttgattactgcagatGGAAGTATTGATTGTTC
TAACGACCCTGGTGAACAAGAAATGAGTGTGGCGTCATTGTTTCTGTGGG
AAATTATCACTGCACTGAGTATTCTTGCAGAAAATGGATCCTTCGTCCTT
AAAATGTTCACCTGTTTTCAGAAATACACTATTGTTTTCATGTATTTACT
GGCAAGCGTGTTTGAAGAAGttacatttttcaaacctgGTCCTAGTAAAC
CTGGAAACTCAGAAGTTTACATTATCGCAACCAAATTTCAACCTGAGGTC
TGCCATCATATGAAACTATATGAAGACCTGAAGGAAGCTGCTTTTAGTAA
CTCTACACCACAAGCCATAGGTGAATTAGTTGATTTTTCTCAACTATCAA
AACCATTTTTAGACTCAATCAGAGAGTACATTGAAGAATCATGCTCTTTG
CAGAAAGAAACAATCCAAAACAATCGAATGACGTTTGAGAAAGTGAATCA
TACTGATCAACAACGACTAAACAAATTGAAAGGATATTTTTCCAGGAGAT
TTATTGAAGACTTTAGTATTGAACCTACCGAGCATTATATTTCACCCATG
TTTGCTATGTTGTCATCTCAAGGCCAGTATAAGAATCAAAAACAGAGTAT
GAATTTCAGGGAAGGGTCTTTGAACCagagaatgaaaacaaaaaacaaca
atacaATTGGTGATCATTCAGAAACTGACCACAACAAAAATATCACAAAA
CATTCAACCTCAAAGCAATTTAACGCTTTCCAATGGGATTCGGCAGATAT
GACAGAACACCATCTCATGCCAgatttatttcaatttaaagATTTAGATA
ATGTTACACCAACCATTGGTCAAACTTTACCAGGTATCTATTCATCAAGT
GTATGTGCCCCTGGGCCAATGGAAATTTATCGTAAGCTACAAGACCTTGA
ACATACAAATCTtgaacaaaaacttttaaatttttttgagacaTTCCATG
AGAAGTTCAATGTAACAAATAATGTTACACTCGTTTCCAATAATGAGTCT
TTTGTAGAACCTGTAATGACAGCTTGTCATGATTCACAGCTGGTAAGCAA
GAAATTTTCAACCTCAGACAGACTTGACAATATCCACACACCTTGCATTA
TTGATTTGGGATCCCTTGGCACTgataaaaagacaaagaaagagATAATT
GATTATTTGATGCAAAATATTGATGCAATTCAAAGATGTTCTTTAGTAGC
ATTTCATTTTGATGGTTTATTACTATCAAATTTCTGGCTtggattttttt
acttgatggGGAGATTATTTGATAGTATAACTTACTATTGTGACTCGAAT
CCTAAAGGAGACCTATTTATGGTATTCGAACATACTCCAGAGTCATCCAA
TAAGGACACTGCAAACGTTGATCAATTTGTAAGATATCTGAAGAGAGTCG
AGTCTTTGCTGAGCAGTTTGGAAGACAACAAAGATGTCTTGCATGTTATG
GATATTAAGATACTGATGGAAAGTCATTACAGAAATTACATTAAACAGTC
AAATGAAGCTTTCATCAAAAACTTTAATCATGTATCGAAGAATTAGATAT
TTTTCTGAATTCATATTATTTTGGATACCTTGGTTGAGGAGcaataaatg
aaataatttgcGTAGTTTCTTGTGAGGTTtattctttttatcatttttct
tttgtaaatgGTGCGACATGGTAAGCAATAAACATGATAGCAAATGATTA
TTCGTTTGTACTTTCTGGTTTCCCATACCAGAAGTCAACTATTTATGGTC
TCacaatatgtaatagttatcggacagttgcgagtacaatatgagaaata
ttttatgagttCCAAGATTTTctcgtacaatattttccgaacctttaggc
gaggaaaatatacggaaaatccggaacgagtgaaatatttcca Run BLAST on NCBI protein sequence of TCONS_00035289-protein >TCONS_00035289-protein ID=TCONS_00035289-protein|Name=TCONS_00035289-protein|organism=Clytia hemisphaerica|type=polypeptide|length=747bp
LMKDQREKLMSNNNRELYKEFDNQWFISNSKIYHVSCPKESDDFIGDEEA
FFASLEIEKTDLNAVKSLLNSVDIASWHRHTSNMHKFSSVPYKLRTQLKV
ELPTQAWAKFYSILGTFEIIPKECIENRYLKSFHLCEAPGAFIASLNHFI
QNRFGYNFKLDWCSTTLNPYYEGNDLGHMIPDDRFMINTLDRWDFCPDLT
GNIKNPNNFKYFVDKMGQQKINLITADGSIDCSNDPGEQEMSVASLFLWE
IITALSILAENGSFVLKMFTCFQKYTIVFMYLLASVFEEVTFFKPGPSKP
GNSEVYIIATKFQPEVCHHMKLYEDLKEAAFSNSTPQAIGELVDFSQLSK
PFLDSIREYIEESCSLQKETIQNNRMTFEKVNHTDQQRLNKLKGYFSRRF
IEDFSIEPTEHYISPMFAMLSSQGQYKNQKQSMNFREGSLNQRMKTKNNN
TIGDHSETDHNKNITKHSTSKQFNAFQWDSADMTEHHLMPDLFQFKDLDN
VTPTIGQTLPGIYSSSVCAPGPMEIYRKLQDLEHTNLEQKLLNFFETFHE
KFNVTNNVTLVSNNESFVEPVMTACHDSQLVSKKFSTSDRLDNIHTPCII
DLGSLGTDKKTKKEIIDYLMQNIDAIQRCSLVAFHFDGLLLSNFWLGFFY
LMGRLFDSITYYCDSNPKGDLFMVFEHTPESSNKDTANVDQFVRYLKRVE
SLLSSLEDNKDVLHVMDIKILMESHYRNYIKQSNEAFIKNFNHVSKN Run BLAST on NCBI transcript from alignment at sc0001287:7997..14693+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00035289 ID=TCONS_00035289|Name=TCONS_00035289|organism=Clytia hemisphaerica|type=transcript|length=6697bp|location=Sequence derived from alignment at sc0001287:7997..14693+ (Clytia hemisphaerica)
CCTTAATgaaagatcaaagagaaaagctgtaagtgcaaaaaaacaattga
tttgccaaaataaaagttaaattaGAGGGTTTCATCATGAGCTTCCCTTT
GGTAAATATATGAAGAACATAAAGTAGAAGAAAAACTAGAAATTCACCCC
TCAGAAAATATTTAGATTACTTTATTTTGTTCAATTGCACTTGTGAAAGC
GGCAAATCAATGTGTATTATGTGTCAACTATGTAAGCATCGTATTGTTGG
AATAGAAAATAGTAAAGAGCTTAGTCTAATAATTGTCAACTGTCAGGGGA
CGTTAAAAGAATATGTGAACTCATttatatcaaaaacaaaacacacgGTT
TTCCCAAGCTGATTATAATAATCATGCCCAAGGATAGGTAAATTAAAAag
gttttcataaaaaaaaaatcattcacaGGAATGGTTTTGATTTATGGTTG
GACTcgtgtatttgcactttttgtcTTAGGAAATTTTTCGAGATTTGATT
TCTCAtgcaaaatctgaaaattttgctaatattttgaactttccttcaaa
atttttatactTTCTTCAGTTACTCCATAGCCTGTGAATtctaaatttat
attttgagaaaaaaataagaattatatattatatacctCAGATCGCAAAG
TTCTAAAATTTCTGAGCTTGGTACTGTACAGGTAGATTAGCCTGGATACA
AAATGTCTGATACAGTCTgcgtgtgaacccttgttgacaatttttggaaa
cccaggcagacacataATTATCCATAAACTCCCTTTAATTAGctctaaaa
actttcaaaactactataaACCATTCCAAAACATTGACCACTTGTATGCA
TGCTCCATGATAactgccattttgttttgaagtgttgtcattttcatttt
cttttgaggAAGGGAAATTGGGAAAGGGAAAATTTTCCATAAATAAGGAT
ATATAGAAAATTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTTTTCGAGATTTGATT
TCTCAtgcaaaatctgaaaattttgctaatattttgaactttccttcaaa
atttttatactTTCTTCAGTTACTCCATAGCTTATGAATTCTAAGtttat
attttgagaaaaaaataagaattatatattatatacctCAGATCGCAAAG
TTCTAAAATTTCTGAGCTTGGTACTGTACAGGTAGATTAGCCTGGATACA
AAATGTCTGATACAGTCTgcgtgtgaacccttgttgacaatttttggaaa
cccaggcagacacataATTATCCATAAACTCCCTTTAATTAGctctaaaa
actttcaaaactactataaACCATTCCAAAACATTGACCACTTGTATGCA
TGCTCCATGATAactgccattttgttttgaagtgttgtcattttcatttt
cttttgaggAAGGGAAATTGGGAAAGGGAAAATTTTCCATAAATAAGGAT
ATATAGAAAATTAACAAAGTGCGCGTAAAATTTCTGGTCAGTGATTCACC
AAAAGCCAACAAATCAGGCCGAATCTGCCAATCAAAACACTACTTTTTGC
TGGTGGCCACACTCacttttggaacaaaaattttaaaatttaaaactatt
ttctttgGCACGTGAAAATAAGCTATTTTGTTTTGAGTCTGAAAATAGTC
TCACAGCTCTGTTCCATCAAGTATACTTTGGATTTGAATATGAAGAAGGG
TTCTCCTGTCtagcattgcagggaaaaaatCTCCTTGCAGGTGAACAAGC
GTTAAATAATCAACAAAGACATAAAAAAGTAGACTGCGAACAAAGTTTAA
TGCTTAGATTCTTAGGCTATAAAATTCAGTTTGCTTCAATGATATTCATC
TGGCCAGCTAAAGGATTTCCATATGGTAATCAAAAGATCACTGATGTGAT
TCCTGTTGTTGAATGTTTTCAGAATCCAACTAGAAATGTCCTTAGGATTC
GCTGTCATTTTATTAATGATGTGAGTTGGTAGGTCTGCAATATCATACTA
GTTGTTTTTGGCAATTGCAACGATGATGGTCTATCGAATAATTAATTATG
TACTGCTACAGAAAATTTTATGAGAAATTTTTACCGATTACTACTGCCAT
GAACCTAGTGGATTGATGAAGCTTCTAAAGCTATCTTTCCTTTCTTGAAT
GACCTTTAATAAATCTTtgggaaaattttattttccatttctcTAGATGC
CCCTATTGCCTTATTCATTATttcattcttaactttttttgtagaaagca
caataaaaaaaaagtttttttaaaccaacaataaataaaaaacatctaTC
AACAATGGATTTGAGTAAAACACCAGATGCAGAGAAAGTGAGACTTTCAA
GAATATACTTCCGTGGTGGTTTTGCATTTTTACCGTTTTTATGGTTTATC
AATACAATTTGGTTTTTCAAAGTGGCTTTTTTTAATGAGCAATTTGAAGG
ACAAAATGAGATCAAGAAGAACGTTATACGGTCTGGAATAGGTGCACTAG
TATGGATAATTGGCATTGCTGTCTGGGTTGTGATTTATCGTACCAACAGA
GCTTCATGGGGAGCAACTggagatgctatatcttttttAATACCTCTTGG
AGAGCCTTAAATAATAATTAAATGAATGTTCTATGTTATTTTGTACATAG
TCGATAATTTCTATATTATTCGATTTGTAAATTTAAGAttacaggcccgg
cggaagcggggaggcTGGGGAGGCTGAAGCCCctccacttttgagcaaaa
tagACTTTTTTCTCCAATTCATGGCAAATTCTACCTCATTAGATCCTTTA
GCCCCTCCGCTTTtatggttgttccgccgggcctgNTTCTATGTTATTTT
GTACATAGTCGATAATTTCTATATTATTCGATTTGTAAATTTAAGATTAG
AAGCCTTTATTTTGTAAGTTTTAACAAAGTTCAATAGTCTCAATACTTCG
TTAAAGATAGGTGTATTTTGATTATCATACTGCTCACATATTAAATGGTC
TAGAGGGTACCTTAACCCTAACAATTTTCACATTCTTTTTGTGCACAAAA
CCTGACCAAAAATTTAAGACGTGTAAAAAAGGCATATTTTCACACACTTG
ACTGTGTCAAATTTAAATGGTGCGTCAATTATTGATCATCATAACGTGGG
AATATCATAATAGTGTCCCCTTTAAAGAAACATGTCTTTTTTGCCCTCTT
TACCTAAATTCATCAAAACATATCCTAGAAATTACAAGAtacacaaaaat
aaaatattatattccccaaaaattgcccaaaaatttaaggcacaaaaatt
aatttttgtaaataaaaggcaTGGGAAAGTTAAGGTATTAAGGTATGTTA
GATTTTCCAATTATTTTGGAAAATGAGTCTGTTGTATTTCATTAgctttt
gtttatattttgtttttataattcTATTTTGATGCAATCTACACAAATCT
ACCGAAATAGAAATGATATAATTTATCGTAAATTTAAGATGTATCAAAGT
ATCCAAAGATTATGTTCATTATTAAGAGCCAGTGATTGATCATTTTATGC
AGTTAGcctgattgaagtttttcatgcagttagcctgattgaagtttttc
atgcTCAGCTATTCTATTGACTAAAtcatctttaaaaattttctgaaatt
tctagtTCCTTTAAAAACTAtatccaaaaataaaatttggatgaaaaata
tTGTTCAAGAAGTTTCGTCAAGAAATTCTactttacttttgtttttttcc
gTTGGTTCTGCCAAAAAAATCTGATCAGAAGGGCTCCCATGAGACATTTT
TCCAATCCGATACATAGTTTTTCTTATTGTTTGGGGCGCTTTATGCCTTA
TCTACAAAATTCTCCAGATGCTAAAGTCCTTACACATTTTAGCCCGTTTT
TAATAATGtttgattcatttttcttatccaTTCTGTATTGTAATCATTCT
TGATGAAAAGTTTTTGTATAATATctgaagtttttttattttgttttctc
tcGTACCCtttcatttatttttgttttttcagaatGAGCAATAATAATAG
AGAATTGTACAAAGAGTTTGACAACCAGTGGTTTATTTCAAACAGTAAAA
TTTATCATGTCTCTTGCCCAAAAGAAAGTGATGATTTTATTGGTGATGAA
GAGGCATTTTTTGCATCACTTGAAATCGAAAAGACAGATTTAAATGCAGT
TAAATCACTATTGAATTCTGTTGATATAGCATCATGGCATCGCCATACTT
CCAACATGCACAAATTTTCAAGCGTACCGTACAAGCTACGAACACAACTC
AAAGTGGAGCTACCAACCCAAGCATGGGCCAAATTCTACTCCATTCTTGG
AACATTTGAGATCATTCCAAAAGAATGTATAGAGAATCGTTATCTAAAAT
CGTTTCATCTTTGCGAAGCTCCTGGAGCTTTTATTGCATCACTGAACCAT
TTTATCCAAAACAGATTTGGATATAATTTCAAGTTAGACTGGTGTAGTAC
AACTTTGAATCCATATTATGAAGGGAACGACCTCGGTCACATGATACCAG
ATGACCGCTTCATGATAAATACACTTGATCGCTGGGATTTTTGTCCAGAC
TTAACTGGAAATATCAAGAATCCaaacaatttcaaatattttgttgaTAA
AATGGGCCAacagaaaataaatttgattactgcagatGGAAGTATTGATT
GTTCTAACGACCCTGGTGAACAAGAAATGAGTGTGGCGTCATTGTTTCTG
TGGGAAATTATCACTGCACTGAGTATTCTTGCAGAAAATGGATCCTTCGT
CCTTAAAATGTTCACCTGTTTTCAGAAATACACTATTGTTTTCATGTATT
TACTGGCAAGCGTGTTTGAAGAAGttacatttttcaaacctgGTCCTAGT
AAACCTGGAAACTCAGAAGTTTACATTATCGCAACCAAATTTCAACCTGA
GGTCTGCCATCATATGAAACTATATGAAGACCTGAAGGAAGCTGCTTTTA
GTAACTCTACACCACAAGCCATAGGTGAATTAGTTGATTTTTCTCAACTA
TCAAAACCATTTTTAGACTCAATCAGAGAGTACATTGAAGAATCATGCTC
TTTGCAGAAAGAAACAATCCAAAACAATCGAATGACGTTTGAGAAAGTGA
ATCATACTGATCAACAACGACTAAACAAATTGAAAGGATATTTTTCCAGG
AGATTTATTGAAGACTTTAGTATTGAACCTACCGAGCATTATATTTCACC
CATGTTTGCTATGTTGTCATCTCAAGGCCAGTATAAGAATCAAAAACAGA
GTATGAATTTCAGGGAAGGGTCTTTGAACCagagaatgaaaacaaaaaac
aacaatacaATTGGTGATCATTCAGAAACTGACCACAACAAAAATATCAC
AAAACATTCAACCTCAAAGCAATTTAACGCTTTCCAATGGGATTCGGCAG
ATATGACAGAACACCATCTCATGCCAgatttatttcaatttaaagATTTA
GATAATGTTACACCAACCATTGGTCAAACTTTACCAGGTATCTATTCATC
AAGTGTATGTGCCCCTGGGCCAATGGAAATTTATCGTAAGCTACAAGACC
TTGAACATACAAATCTtgaacaaaaacttttaaatttttttgagacaTTC
CATGAGAAGTTCAATGTAACAAATAATGTTACACTCGTTTCCAATAATGA
GTCTTTTGTAGAACCTGTAATGACAGCTTGTCATGATTCACAGCTGGTAA
GCAAGAAATTTTCAACCTCAGACAGACTTGACAATATCCACACACCTTGC
ATTATTGATTTGGGATCCCTTGGCACTgataaaaagacaaagaaagagAT
AATTGATTATTTGATGCAAAATATTGATGCAATTCAAAGATGTTCTTTAG
TAGCATTTCATTTTGATGGTTTATTACTATCAAATTTCTGGCTtggattt
ttttacttgatggGGAGATTATTTGATAGTATAACTTACTATTGTGACTC
GAATCCTAAAGGAGACCTATTTATGGTATTCGAACATACTCCAGAGTCAT
CCAATAAGGACACTGCAAACGTTGATCAATTTGTAAGATATCTGAAGAGA
GTCGAGTCTTTGCTGAGCAGTTTGGAAGACAACAAAGATGTCTTGCATGT
TATGGATATTAAGATACTGATGGAAAGTCATTACAGAAATTACATTAAAC
AGTCAAATGAAGCTTTCATCAAAAACTTTAATCATGTATCGAAGAATTAG
ATATTTTTCTGAATTCATATTATTTTGGATACCTTGGTTGAGGAGcaata
aatgaaataatttgcGTAGTTTCTTGTGAGGTTtattctttttatcattt
ttcttttgtaaatgGTGCGACATGGTAAGCAATAAACATGATAGCAAATG
ATTATTCGTTTGTACTTTCTGGTTTCCCATACCAGAAGTCAACTATTTAT
GGTCTCacaatatgtaatagttatcggacagttgcgagtacaatatgaga
aatattttatgagttCCAAGATTTTctcgtacaatattttccgaaccttt
aggcgaggaaaatatacggaaaatccggaacgagtgaaatatttcca Coding sequence (CDS) from alignment at sc0001287:7997..14693+ >TCONS_00035289 ID=TCONS_00035289|Name=TCONS_00035289|organism=Clytia hemisphaerica|type=CDS|length=4488bp|location=Sequence derived from alignment at sc0001287:7997..14693+ (Clytia hemisphaerica)
TTAATgaaagatcaaagagaaaagctaatGAGCAATAATAATAGAGAATT
GTACAAAGAGTTTGACAACCAGTGGTTTATTTCAAACAGTAAAATTTATC
ATGTCTCTTGCCCAAAAGAAAGTGATGATTTTATTGGTGATGAAGAGGCA
TTTTTTGCATCACTTGAAATCGAAAAGACAGATTTAAATGCAGTTAAATC
ACTATTGAATTCTGTTGATATAGCATCATGGCATCGCCATACTTCCAACA
TGCACAAATTTTCAAGCGTACCGTACAAGCTACGAACACAACTCAAAGTG
GAGCTACCAACCCAAGCATGGGCCAAATTCTACTCCATTCTTGGAACATT
TGAGATCATTCCAAAAGAATGTATAGAGAATCGTTATCTAAAATCGTTTC
ATCTTTGCGAAGCTCCTGGAGCTTTTATTGCATCACTGAACCATTTTATC
CAAAACAGATTTGGATATAATTTCAAGTTAGACTGGTGTAGTACAACTTT
GAATCCATATTATGAAGGGAACGACCTCGGTCACATGATACCAGATGACC
GCTTCATGATAAATACACTTGATCGCTGGGATTTTTGTCCAGACTTAACT
GGAAATATCAAGAATCCaaacaatttcaaatattttgttgaTAAAATGGG
CCAacagaaaataaatttgattactgcagatGGAAGTATTGATTGTTCTA
ACGACCCTGGTGAACAAGAAATGAGTGTGGCGTCATTGTTTCTGTGGGAA
ATTATCACTGCACTGAGTATTCTTGCAGAAAATGGATCCTTCGTCCTTAA
AATGTTCACCTGTTTTCAGAAATACACTATTGTTTTCATGTATTTACTGG
CAAGCGTGTTTGAAGAAGttacatttttcaaacctgGTCCTAGTAAACCT
GGAAACTCAGAAGTTTACATTATCGCAACCAAATTTCAACCTGAGGTCTG
CCATCATATGAAACTATATGAAGACCTGAAGGAAGCTGCTTTTAGTAACT
CTACACCACAAGCCATAGGTGAATTAGTTGATTTTTCTCAACTATCAAAA
CCATTTTTAGACTCAATCAGAGAGTACATTGAAGAATCATGCTCTTTGCA
GAAAGAAACAATCCAAAACAATCGAATGACGTTTGAGAAAGTGAATCATA
CTGATCAACAACGACTAAACAAATTGAAAGGATATTTTTCCAGGAGATTT
ATTGAAGACTTTAGTATTGAACCTACCGAGCATTATATTTCACCCATGTT
TGCTATGTTGTCATCTCAAGGCCAGTATAAGAATCAAAAACAGAGTATGA
ATTTCAGGGAAGGGTCTTTGAACCagagaatgaaaacaaaaaacaacaat
acaATTGGTGATCATTCAGAAACTGACCACAACAAAAATATCACAAAACA
TTCAACCTCAAAGCAATTTAACGCTTTCCAATGGGATTCGGCAGATATGA
CAGAACACCATCTCATGCCAgatttatttcaatttaaagATTTAGATAAT
GTTACACCAACCATTGGTCAAACTTTACCAGGTATCTATTCATCAAGTGT
ATGTGCCCCTGGGCCAATGGAAATTTATCGTAAGCTACAAGACCTTGAAC
ATACAAATCTtgaacaaaaacttttaaatttttttgagacaTTCCATGAG
AAGTTCAATGTAACAAATAATGTTACACTCGTTTCCAATAATGAGTCTTT
TGTAGAACCTGTAATGACAGCTTGTCATGATTCACAGCTGGTAAGCAAGA
AATTTTCAACCTCAGACAGACTTGACAATATCCACACACCTTGCATTATT
GATTTGGGATCCCTTGGCACTgataaaaagacaaagaaagagATAATTGA
TTATTTGATGCAAAATATTGATGCAATTCAAAGATGTTCTTTAGTAGCAT
TTCATTTTGATGGTTTATTACTATCAAATTTCTGGCTtggatttttttac
ttgatggGGAGATTATTTGATAGTATAACTTACTATTGTGACTCGAATCC
TAAAGGAGACCTATTTATGGTATTCGAACATACTCCAGAGTCATCCAATA
AGGACACTGCAAACGTTGATCAATTTGTAAGATATCTGAAGAGAGTCGAG
TCTTTGCTGAGCAGTTTGGAAGACAACAAAGATGTCTTGCATGTTATGGA
TATTAAGATACTGATGGAAAGTCATTACAGAAATTACATTAAACAGTCAA
ATGAAGCTTTCATCAAAAACTTTAATCATGTATCGAAGAATTAGTTAATg
aaagatcaaagagaaaagctaatGAGCAATAATAATAGAGAATTGTACAA
AGAGTTTGACAACCAGTGGTTTATTTCAAACAGTAAAATTTATCATGTCT
CTTGCCCAAAAGAAAGTGATGATTTTATTGGTGATGAAGAGGCATTTTTT
GCATCACTTGAAATCGAAAAGACAGATTTAAATGCAGTTAAATCACTATT
GAATTCTGTTGATATAGCATCATGGCATCGCCATACTTCCAACATGCACA
AATTTTCAAGCGTACCGTACAAGCTACGAACACAACTCAAAGTGGAGCTA
CCAACCCAAGCATGGGCCAAATTCTACTCCATTCTTGGAACATTTGAGAT
CATTCCAAAAGAATGTATAGAGAATCGTTATCTAAAATCGTTTCATCTTT
GCGAAGCTCCTGGAGCTTTTATTGCATCACTGAACCATTTTATCCAAAAC
AGATTTGGATATAATTTCAAGTTAGACTGGTGTAGTACAACTTTGAATCC
ATATTATGAAGGGAACGACCTCGGTCACATGATACCAGATGACCGCTTCA
TGATAAATACACTTGATCGCTGGGATTTTTGTCCAGACTTAACTGGAAAT
ATCAAGAATCCaaacaatttcaaatattttgttgaTAAAATGGGCCAaca
gaaaataaatttgattactgcagatGGAAGTATTGATTGTTCTAACGACC
CTGGTGAACAAGAAATGAGTGTGGCGTCATTGTTTCTGTGGGAAATTATC
ACTGCACTGAGTATTCTTGCAGAAAATGGATCCTTCGTCCTTAAAATGTT
CACCTGTTTTCAGAAATACACTATTGTTTTCATGTATTTACTGGCAAGCG
TGTTTGAAGAAGttacatttttcaaacctgGTCCTAGTAAACCTGGAAAC
TCAGAAGTTTACATTATCGCAACCAAATTTCAACCTGAGGTCTGCCATCA
TATGAAACTATATGAAGACCTGAAGGAAGCTGCTTTTAGTAACTCTACAC
CACAAGCCATAGGTGAATTAGTTGATTTTTCTCAACTATCAAAACCATTT
TTAGACTCAATCAGAGAGTACATTGAAGAATCATGCTCTTTGCAGAAAGA
AACAATCCAAAACAATCGAATGACGTTTGAGAAAGTGAATCATACTGATC
AACAACGACTAAACAAATTGAAAGGATATTTTTCCAGGAGATTTATTGAA
GACTTTAGTATTGAACCTACCGAGCATTATATTTCACCCATGTTTGCTAT
GTTGTCATCTCAAGGCCAGTATAAGAATCAAAAACAGAGTATGAATTTCA
GGGAAGGGTCTTTGAACCagagaatgaaaacaaaaaacaacaatacaATT
GGTGATCATTCAGAAACTGACCACAACAAAAATATCACAAAACATTCAAC
CTCAAAGCAATTTAACGCTTTCCAATGGGATTCGGCAGATATGACAGAAC
ACCATCTCATGCCAgatttatttcaatttaaagATTTAGATAATGTTACA
CCAACCATTGGTCAAACTTTACCAGGTATCTATTCATCAAGTGTATGTGC
CCCTGGGCCAATGGAAATTTATCGTAAGCTACAAGACCTTGAACATACAA
ATCTtgaacaaaaacttttaaatttttttgagacaTTCCATGAGAAGTTC
AATGTAACAAATAATGTTACACTCGTTTCCAATAATGAGTCTTTTGTAGA
ACCTGTAATGACAGCTTGTCATGATTCACAGCTGGTAAGCAAGAAATTTT
CAACCTCAGACAGACTTGACAATATCCACACACCTTGCATTATTGATTTG
GGATCCCTTGGCACTgataaaaagacaaagaaagagATAATTGATTATTT
GATGCAAAATATTGATGCAATTCAAAGATGTTCTTTAGTAGCATTTCATT
TTGATGGTTTATTACTATCAAATTTCTGGCTtggatttttttacttgatg
gGGAGATTATTTGATAGTATAACTTACTATTGTGACTCGAATCCTAAAGG
AGACCTATTTATGGTATTCGAACATACTCCAGAGTCATCCAATAAGGACA
CTGCAAACGTTGATCAATTTGTAAGATATCTGAAGAGAGTCGAGTCTTTG
CTGAGCAGTTTGGAAGACAACAAAGATGTCTTGCATGTTATGGATATTAA
GATACTGATGGAAAGTCATTACAGAAATTACATTAAACAGTCAAATGAAG
CTTTCATCAAAAACTTTAATCATGTATCGAAGAATTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00035289-exon-sc0001287-1491911889:7997..8024 | TCONS_00035289-exon-sc0001287-1491911889:7997..8024 | Clytia hemisphaerica | exon |
| TCONS_00035289-exon-sc0001287-1510915933:7997..8024 | TCONS_00035289-exon-sc0001287-1510915933:7997..8024 | Clytia hemisphaerica | exon |
| TCONS_00035289-exon-sc0001287-1575043694:7997..8024 | TCONS_00035289-exon-sc0001287-1575043694:7997..8024 | Clytia hemisphaerica | exon |
| TCONS_00035289-exon-sc0001287-1491911889:12129..14693 | TCONS_00035289-exon-sc0001287-1491911889:12129..14693 | Clytia hemisphaerica | exon |
| TCONS_00035289-exon-sc0001287-1510915933:12129..14693 | TCONS_00035289-exon-sc0001287-1510915933:12129..14693 | Clytia hemisphaerica | exon |
| TCONS_00035289-exon-sc0001287-1575043694:12129..14693 | TCONS_00035289-exon-sc0001287-1575043694:12129..14693 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001287 | supercontig | sc0001287:7997..14693 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0032259 | methylation |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008168 | methyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0032259 |
methylation |
| molecular_function |
GO:0008168 |
methyltransferase activity |
Blast
BLAST of TCONS_00035289 vs. Swiss-Prot (Human)
Match: CMTR2 (Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 OS=Homo sapiens GN=CMTR2 PE=1 SV=2) HSP 1 Score: 249.98 bits (637), Expect = 1.798e-70 Identity = 158/398 (39.70%), Postives = 217/398 (54.52%), Query Frame = 3
Query: 57 KEFDNQWFISNSKIYHVSCPKESDDFIGDEEAFFASLEIEKTDLNAVKSLLNSVDIASWHRHTSNMHKFSSVPYKLRTQLKVELPTQAWAKFYSILGTFEIIPKECIENRYLKSFHLCEAPGAFIASLNHFIQ-NRFGYNFKLDWCSTTLNPYYEGNDLGHMIPDDRFMINTLDRWDFCPDLTGNI---KNPNNFKYFVDKMGQQKINLITADGSIDCSNDPGEQEMSVASLFLWEIITALSILAENGSFVLKMFTCFQKYTIVFMYLLASVFEEVTFFKPGPSKPGNSEVYIIATKFQPEVCHHMKLYEDLKEAAFSNSTPQAIGELVDFSQLSKPFL-DSIREYIEESCSL----QKETIQNNRMTFEKVNHTDQQRLNKLKGYFSRRFIEDFSIE 1223
K +N+W + P S+ F D A L++ K LN VK+LL+ + WH HT+ +K + +R + EL TQAW KF+ IL +F +IP+E +N L S HLCEAPGAFIASLNH+++ +RF ++ W + TLNPY+E ND MI DDR + NTL W F PD TG+I K + F+ M ++L+TADGS DC +PGEQE V+SL E++TAL+ L GSFVLKMFT F+ +I MYLL F++V FKP SK GNSEVY+ VC H K E + S T E+ + + DS + EE C Q ETI N FE + +Q++LN L+ + F++ F ++
Sbjct: 38 KPLNNEWQL----------PDPSEIFTCDHTELNAFLDL-KNSLNEVKNLLSDKKLDEWHEHTAFTNKAGKIISHVRKSVNAELCTQAWCKFHEILCSFPLIPQEAFQNGKLNSLHLCEAPGAFIASLNHYLKSHRFPCHW--SWVANTLNPYHEANDDLMMIMDDRLIANTLHWWYFGPDNTGDIMTLKFLTGLQNFISSMA--TVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFTMFEHCSINLMYLLNCCFDQVHVFKPATSKAGNSEVYV--------VCLHYKGREAI-HPLLSKMTLNFGTEMKRKALFPHHVIPDSFLKRHEECCVFFHKYQLETISENIRLFECMGKAEQEKLNNLRDCAIQYFMQKFQLK 411
The following BLAST results are available for this feature:
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