TCONS_00035241 (transcript) - C. hemisphaerica

Overview
NameTCONS_00035241
Unique NameTCONS_00035241
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3397

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00035241 ID=TCONS_00035241|Name=TCONS_00035241|organism=Clytia hemisphaerica|type=transcript|length=3397bp
TCGGTACCGTAGGAAAAATATGTTGTTATAGGCTACGGGCGACCACAGga
ttttgtttacaaaacaaagatggtaggCGACCGACTGCTCATCTGGTTGG
GACGAAGGGCAATTTTGCAACAGGACAAACACAAAAAGATGCTTTGAGAC
AAACTTTTGCTTTATCTATAGACtttaatatttcataatttaatTTACGT
GATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATACTATTCAGA
ACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAATTCAACGAA
TTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAATTGTATCCA
GCAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCGTGCTGTTG
TTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTATCAAATCG
TTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCATTTGAGGAA
AGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTTGCGACCTC
TGAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGGCAGCCGAAAAA
AAGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAATTGAGTGCTGT
TCAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAGATTGAAAGCTG
TTTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCAGGGACAGTGCT
TCTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAATCGTTACCTGC
CGAACTTGAGGTCAACCCATTGGGACCATACACACCAGAAGCTGCTCAAG
CAGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAGCGTTGCTAAGG
GACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAAAGAGATTTTCA
TAAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGAGACTGTCGCTA
TGAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAATGGCTATCCAT
CGTGGTAACAGATGGCATTACACGACAGCTATCACACGTGGTTACACTCT
GggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACGCCTTGACCGCC
CTCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATCTTAAAGAAGCA
CAGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCTCTACAGGCTGT
TGAACGAAATATTGGCATGCTAAAACTCACGGAAGACCGATTAAAAACTG
ATATACATGACAAACATAGAGCAGCCGGTATTGACTCTAGTATCGTACGT
CACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGAGGTCTCAGTTG
TTAAAACTAGGGCCTGGAGTCCAAAGACAGACATTTATTaacaaagaaaa
gattgaaTTACGGGGACAATTTTCGATACCAAATTTGAaacatattttct
aaattttatttcacttttattttttttatttgcaaggtgatttttatttt
acgctgtataaatatttttttacaaggGCTTTgacaaaatcatatatttt
ttattataaaaataaatctaTCTCCCTACAAACAAAATTTGACTAAGTTT
TTTACACCTGCCTTAcccaatatatttttcaaagtaGGCATAACTAGCTG
AAttgaaaagggggggggggtatttgATTGAATTGATGATGCTCGCTTAA
AGTAACGGCCTGGGTAAGACCCCTTATGAGAAAGACACTTTAAAGAGGTA
TAGGTCTGAAATAGCATACCAcagtgattctaaaaatagacatcaaaatt
actgtttgtccgagttttaatcccatcatcctttgcaCTAATTATGCTTT
TGCAAGTCAATtacacttattgacaatacaaaagtaataacttgcacgca
ttacgaatcatgatgaaaagtattgtgggattgaatttcggtaaaatgtt
aaaagtaataattatgacgtttgcatagcggTGTGCTATTTGGTGGAGTT
ATTCCTTGGATTGAATcattaaaacaaatttcaagGGAGCATGccccaaa
attttctatttttgataacGTCACTCTTGTTTTTATTAAGGAAAGATGTA
CAAGTTTGAGAAAGTaaatatattcttaattttaaaCCTTAAAATCATGG
TAATCTTCTACCACGACGAAATTTATATTTCGACCATTCAACTTCCTTTA
TTCGAATACCAAGTATGCCAAATAATTTTCCTCGTCCACGTAATTTGACC
ATTCTTGGTTTCGATTTCTCCACTTTTTTCGTCCCCTGAAGTCCACCAAC
GTCATTGGTCAATTTTGAACTATTTCGATCAATCGGTTTCTTTTCTTTAG
GAGGCTGAGGACTAGTACTCACATTTGCTTTGtatttcttaacatttttc
ttATGCGTTGGTGACGATGACTTCATAGGACCATTATCTAATTTATCATA
ACTgttctttgactttttttcatcgGTAATTGGGTTAATTTTCTCGTTAA
TCAAAGATTTCATACCTCTATCAGAAATAATCGAATTTGTTTCCTTTGGG
AACTTCCTTTGATCATCTTGATTgttttctaaatgtttatcgTTACCGTG
TTCCTTAACTCCATCTGGCAACGCCCCACTTTCAGTCGTAAGCTTTTCAC
CAAATGTGGATGTCATTCCCTTGTCATCAGTACCAGTCAAGTTCTTATAA
TTGTCATCTGAATTACTNTGTCATTCCCTTGTCATCAGTACCAGTCAAGT
TCTTATAATTGTCACCTGAATTACCAGTATCtgccaattttccaatttcc
agAGTCCCTATCTCTAATCTCGTAGAATTTTCAGTTCCTGATATTAATGG
TTTATTCTCCACATCAGTACTCTTAGACGTATCTTTACCCACTATGGAGC
TTTTTTTGTCTAAATTTTCATCTTGATCCGCACCTGCTATACTCACAATC
AACGAATTATCTTCGCCTTCTTCCACTCCGAATAATTTTCCATGTCCTCG
GCTCTCGTAAAATTCGCCTTGTTCTAAAAGAACACCGATCGATTCTTCAA
TTTTCTCTTGTTCCAGTTCCATTTCTCTTTGAGCCATTCTTCGGTGATGC
TCTGCGAGCCAAGATGGTAGCTGAGTATCATCATTGATGTAACCATGGAT
ACCAAATAATCTCCCGCGACCACGCCCTCCTAACAGGGCGTTTACATGGT
GTATAACAACTACGAATACCAGCAGTAGACTGACGATATTGAATCTCAac
atttctttaagaaaaaaaacaaactaaattaaATGATATTAAATGTTGTG
TGTCTTAGTGTCGTTCCAAATAAACAGTCTAATGTCTCATTTTCACT
Run BLAST on NCBI

protein sequence of TCONS_00035241-protein

>TCONS_00035241-protein ID=TCONS_00035241-protein|Name=TCONS_00035241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MEATIGQDLWKKDTIQNIKLAQAVVQRSDKFNELGRQLDPLPSLRDNCIQ
QSNAEIHSYMRSARAVVIKLRDNLLNTEEVIKSFLKSKEKLETALEHLRK
DILLNEQCRSGRHLRPLKEQKKDGCDDLLAAEKKTLLKLKRILESKLSAV
QQTLQYLDNARKRLKAVLSERNRVLDLICRDSASARILKAKNIDHQSLPA
ELEVNPLGPYTPEAAQAVAMATNAVQKSQALLRDVEFTIDETRAVQRDFH
KSVNNGLTKKVAETVAMKQHLQLTSGENRMAIHRGNRWHYTTAITRGYTL
GPVSASDLTTRERLDRPQVKCYQRHPGTHLKEAQHIIEGNHGLDASLQAV
ERNIGMLKLTEDRLKTDIHDKHRAAGIDSSIVRHRRRQANHRWVVGGLSC
Run BLAST on NCBI

transcript from alignment at sc0001278:36135..48503+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00035241 ID=TCONS_00035241|Name=TCONS_00035241|organism=Clytia hemisphaerica|type=transcript|length=12369bp|location=Sequence derived from alignment at sc0001278:36135..48503+ (Clytia hemisphaerica)
TCGGTACCGTAGGAAAAATATGTTGTTATAGGCTACGGGCGACCACAGga ttttgtttacaaaacaaagatggtaggCGACCGACTGCTCATCTGGTTGG GACGAAGGGCAATTTTGCAACAGGACAAACACAAAAAGATGCTTTGAGAC AAACTTTTGCTTTATCTATAGACtttaatatttcataatttaatTTACGT GATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATACTATTCAGA ACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAATTCAACGAA TTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAATTGTATCCA GCAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCGTGCTGTTG TTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTATCAAATCG TTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCATTTGAGGAA AGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTTGCGACCTC TGAAAGAACAGGTGAGTTATCATAATTTTTGGCttcaaattgttttcttt aatcaACAAATAATaactaaatcaaaaaaattgaaaaagtaaaaCCATCT ATTCCATGGTCCATTTGCTTATTCTTgccattttaaaaaaaataattcaa ttttacaCATATCATCATTGAAAAAACCATGCAGAACacttttatttttg agaaaaatcattcaataagtatttgaaaatgaagatgaaaaatgaagaag caaTTAAGGTCGTCCGACCactgtttatttacaagaaaacccGATTCGGA AAGTCGGTAAAATCATCAGGTTTTTTTTGGCGGCAACATAATTATCGACT CAAGTCGTTggacatttgaaaattattcaaaaaccTGAACATAATGTTTG GTACCAACCGACCAACTCATTTTTATGTCATTTTAGGACCAGAAcgcaac atatttttgattgccgccttatCCCTCTCGGTACACTAGAGACTCCATTT TTTGGTGTGTGCAGATTAAGATGTACTTTGAAGCATCCTGATTTCAGATT ACAATTatgcaattttatttttcacacaTGATTAAATGCTGCAGAAAGTT ATGGCCCTACAGTAAGAAGGGTGTCCGCCTAATTAAATTCTTTCTCCATC ATACGCCAAATaaaattcctgccaaatttaagttgctCTAAATGTGTGCT ATTTTCAAGCTTTAAAACAGGGTTTTCTGTTTTTAATGTAATGCTAATtg gcgttttttggacaaaaatgtccttcatccgccaaattaaattctagcca aatctaatttttcaagttaaccgtCAAATTatattccctctgaaaaaact tttccggccatccgctaaattaaattcctgataaattaaattttaaatta aattctagccaaatctaatttttcaagttaaccgtCAAATTatattccct ctgaaaaaacttttctggCCATCcactaaattaaattcctgataaattaa gttcctgccaaaatttttTCGATAACGATAGTGTAAAAAGCTGAAATCAA GAGGCTTCAAAGCACCTCCAAACCAAAAATGAGGTATACTTGGCGTTcta aatttagaacgccatgattTTAATAGCACAATGAGcataaaaagtttatt tttttgttcttcatttttcatcttcattttctgaattatttttctcagaa attatACTGTATAAATGGCATGTGAGGATTGAAGCATTCATTGAAAATGA CAAGCATCGCAAAGGAAAATTTAGTGTACACTTTAAAGCAGATGAACTCA TATATTGGCTCATAAAATTATGAATACTGTATGGCACTTTTCTATAGTAT AACCAGTAGAGTAGAATCAGGCAGTGATAACTGATAATTCTAAGTAACTG ACGAAATATGCAGCATAAAAGTTGAGTTTTAGAATCTTAACAGTGTACAG TACTGTAGTGAAAAATTAGTGAAATGAAATTCGTACCAaattacagtgca tttttctcaaattttcaactcttttaagagcaaaaaaatcagaatttttc GGCAAAAATGTACAATTCTTTGAATTTGCTGAAGTCTCCATCCTTACAGT ACATTTATCAAAAAAGTAAGTAAGGAGTAAATGTTATTAGTTATTCTATT ATCTCTGAAAAGGTTCATGAAATTAGAGCAGGCCAAATCAGTCATTCTGA CAAGAGCAGAATTCTAATACAGTAAAATACTGACACAGTCAATCTTTATT TTTATGAATTAATTtgctaattttgattttgatgcaATGATTATGGTAAT ATTAGCATATGATAAATCTAATGGCGTTGTTCAAGACTCTACAATTCAAA GATAGCTCCCCTTGGTTCACCAGAAGCTTTTACATCAACAGAATCACCGG AACCATCAAAATCAACTCTAACACTAGAACCATATCAATGTCACTAGAAG ATTTAACAGAATCAccaattttacaaaatattcaTCAAAACAATTAACTC CACGGATtgattcaccaaaaccatcaactccaacATGTTCAACAAAAATA ACAACTCTACCAGAAGATCCGCTATAAGATCATTAACCCTACCAAAGTAT TGATTAAATTACATCGATTTTCGGGGTCACATCTTAGGTTCTTCCAATCA AATATGGCACATACCATATAGACtggctttaaaatctttggtAATCGGGT TACTCATGCCGTTTAGACAAAAGTCACATCTTGGAGCTTTACACCAAGAG ACAGTTTTTCAAGCAAGTCGAGCTCACAGAAACAGAAAGATACGTTATAA TACATTTATATGGAAAGTTTAGACAAGTTATATAGCCAAGTCTCTGCAAC TCAAACAAGTACAAGTTTGGGGAACTCAAAATCGTGTTATTATACTGTAA GAGTCcgagttttttttaaatgattttgatATATCGATTTTTTAGTAGAA TACTTTAGTTGAAATGATAGAAAAATgttattgattttgaaataacaTCA TAGACTCATAGTCAGAAAAATTGATCGATGATTCTCATAATTTTATACCT TAGAAAAAAGACGGATGCGATGATCTTTTGGCAGCCGAAAAAAAGACTCT TCTAAAACTGAAAAGAATACTGGAGTCCAAATTGAGTGCTGTTCAGCAAA CACTTCAATATTTGGATAATGCTCGCAAAAGATTGAAAGCTGTTTTGTCG GAACGCAACCGAGTTTTAGATTTAATCTGCAGGGACAGTGCTTCTGCTCG TATTTTGAAAGCCAAGAACATTGATCATCAATCGTTACCTGGTGAGTAAA CACCCCTTATTTCTCTCCCCTAGTaacattatttttatttgggaATTTAT CGGGCTTTTCCTGACTTCGATTGAATGAAAAACCTTGCCATAGTGCTAGC AAAACAAGATAAAACTTTAAATCAGCTAGCAGAACAAATTCAAGTCTTCC GGAAGCTTTCAAGCCCAAGTTCATTGGGGGGGGGAGGGTTTTATCTTTAA TTGTCAATGCCTCTTTAAACTTATTTTCACACACTCCATCTAGATGATAA ACGTTTTCACAATGATtccaaaattaccaaaacaaTCAAACGTCTGTGTA AAGATTTAATCATTCTCCTTAAAAACCAAATAAATGTGCTGGTGGTACTC CTTAATAATAATGACTATGCTGAATCactaaattcgtttttttccgATCG AAAGAAGCTCAGAGTTGTACAATATGACCTATCTGTCACCAAAATGACGT TAGAAATACCACACATTACGCCGTCCACACACAGCCCCTATCCGTTTGCC CCCCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNtttcccccccccccccccaaagttTTATTT CCAATTAATTTGTTTATTGCGAAGATTAATGACTAACGGTTTAAAAGGAC TGAAAATTACGCCATGCGTGTTATTGCTGTAGGAATTGTAAGGCCACTCA CTGATATCACTCTGACTATGCTTTAATTGTGAAGCAAAATATTaggtttt tcaaaaatgaaaattttgatgtttgtgaTCTGACTCCACATAGATAAATG GCAAAATCAATTTCGGATTAAGTTTTATCTTATTTTCGATTGAATGGTGT GACCAAATCTGGCAAAACACATATCAATCCCTTTAGCTAAAAGCTTTGAA TTTTTTAGATAAGGTTTTAATGACGTCAAACGTCTAAATTCACTTCATTT ATAAGACCATATTCAGACGTTACGGATAAGCACCGCTTCGATATTGTTTT TGTTACGGATAGgaagtgttcatattggtttcggaacgtttcaaagaaag aaaacagaGCTTTCGTTCAAGACCGTAAGGTCTGAACACAAAAATCTGAC GTCTCTCGATTCGTCGTACTGTAAACTTGAATCCCATTCTATTGATTTGA TAGATGTATTTAGATTACATTaaattgctatgaaattattgCTATAGCAG AAACTCAGTAAGGCTGTCGGTGACTGTGCTAGGTATCGACTACACCGTGG ATGAGGTGAATGTGTGCTGGTCTTGTTCCCTAGTGGTTCACGCCTGATTA ACGCAATTGATCCAAAAAACTGTGTGTTAGTGTCTTGCAAGCTTGCAGGT AGTCTAAACTACAGCGTAAGACAATTCTAACGAGACTACTCCTAGACCGC TCAATACGGAACCGGCATCCTCTGTGCGGAGTAGCCAGTCGCCACATTGC TACGAATCACTAGAGCAGGTAATCTACAGATAAAAAGATGCAAGTTTAAA TAAGACATAGAATCCCACATATGCAAGGCCATAATTCAAAGCTAAAAATA GggtaaaaatataataataaagtAAGACACGAAAGGCtgagaattttcaa ttttcaaaatattcccGTGTGCCTTTTTCTTTTAAACCAACTATATATAA CCTTTGTTGAATTTAGAATATATATATGAGCAAGACCACCTCTTTTTATA AATAAACTGACCAAAAAAAACAGTTAAAGAACTTCTTTCAATTCAGGTTG ATCATGTATCTCTTCGATATCTTCATTAATCTTCTCAGATTAAGAAAGag ttattttttactttttcttaacaAATTCTTTGACcgagaattatttttta ctttttaaagtaaaatagaaaagaaagataattgTGGTTATGTTTTTTCG GTTTCCCTACATGAACTACATGGAGTTATACAAACTGAAgattggaaaat aaaataaatttgctgaaaatattttttctctttacCTTTTCAGTATTTAT CTTTTCTTAGAGATCTTCTATTTTGTCTTTTATCCAAACAACTAGAAATA TAGCTACAGATAAAAACCTCACTGAAATCTTCATACAAATTTGCAAAGAT GGAAAGTAATCTTTCAGATTTATCTAAACCCCgaaaattccgaagaaaaa gaGTCTATTTTCCCCTTTGAGATTTACTTGATTATTCACGAAACTCCTTT CTTTTGGTGTTTTCGGGCTTAAAATAAATTTGTTGTGCATCCGATACAAA AGTAACATACTCAATTGAAGGTTGAAGCAGCGTCTTACTCTAAGTTCCAA AGTATagttcaaaattgaaaataaagaagatgccatgtgtactagttatc gcatgacttcgagtgcaatacgacaAATATTTTACGAGCTCCGGGATTTT TTCGTAATATCTCTCTGAGCCTTcaggcgaggaaaaatattggaaaatct CGGTACGAGTAAAGTATTTGCGTATTGTAGGAGACGTGTCGTCGTATTTG GATGCTATATCGACCAGTCAAAACGTTGGTATTAGGTAAAAAAATCTAGG ATTTCATAGATCTTGCAACAAGAGGACGATGCTTTTAACGTTTGATTTAA TTGAACTTTTAAATGTCAATTTCTTATTATTTTATACACAATCCTTTTTG GAACATAACATTATACTTGTCAAATCTTTGGGACAGTAGGACGTCGTACA AAGTTTctgtaatacaccttttcgaccatagtcgcgcggtcaggtgcgtg ccactttattaccttatcggccctttttaccccggcccttattggcgtta tttttaggctcttAGCGTAATAAGAGCCGGCGGaaaaggggccggcgtta aattagggccggcgtaaaaagggtcgataaggtatttaatttccaatcct ttttttactcttttttctattgtctttaggtgcgaaaaaaagactggaaa agttttagggtggtaaaacggacaaaaaaaatgcccgcgcggcaattggc ggctacggtcgaaaaggtgtattctcgAGTGAGGTTAATACTTTTAAAGA CATGTATTCAGAGCATCATCTCCTTCTCTTTTCTATCAGCCGAACTTGAG GTCAACCCATTGGGACCATACACACCAGAAGCTGCTCAAGCAGTTGCTAT GGCAACCAATGCTGTACAAAAATCGCAAGCGTTGCTAAGGGACGTGGAGT TTACCATTGATGAAACGCGAGCTGTTCAAAGAGATTTTCATAAAAGTGTC AACAATGGATTGACAAAGAAAGTAGCAGAGACTGTCGCTATGAAGGTAAG AAATGTTGCACACATGCATGTCCTTTTCTATAAGTATAACGTTTTtaagg gagtttctaaacatcgaccagaaatggcgaccacgaccagcgaccacgac cggcgaccagataaatttgggttatcgagtttatctgctctctccaccgt agagaacatccaaatcgagtcatgatgtggctttcaaatgatccactgag cacgtggctgagaattactctagctgagaatactaaaagtgacctttgac gttaccagtcattttctagaccaagttacactttttgacaaaaatattga cagggcaattaagtgtgatgcctgtaaactttattacaccaaataattta attgtaccgaatgagatgcctttagtatgaatagatagaaattgtcagta ggCAAAAGCTGGGAagggcagttttagagatatgaatctcatcaattatt ctattgtccttacattgtcaaaatgacttatttggacaaaataatgatct gatgatcaaatataaagcttcctaaataaattccagcacaaattttgcca ctaattactttgatgccgaaaatacaaaaggatagaaattgacaatctat tcaagctccaagagcgttgaaatggctgctctacacgttttgcacgtggc tttataatcactgtaggtgagacaggggtgagctgtACTCTTCAATTCGA TTAATGAATTATCATAAGAGAaagactctacggtggagaaagaggaaaaa ctcgataacccaaatttatctggtcgccggtcgtggtcgctggtcgtggt cgccatttctggtcgatgtttggAAACTCCCCGTTTTTAAGTATTATGCT CAgattttggtacctaaacaatggctttattgtttaagaacaatagaatg ctaagtaaatgcgagcctgatatagggacagacacttgcttataaaaaaa catgtaccttGAAAAAATACTAGACGAAGCCGAAGCCTCTACGTACCGTG AGCTTATCTGGTTTCTTGTGATTTGTTGTCACAGCGTCTACGAGGTCGGA GCTGGCAATTTGTTAAATCAAGACTATTTTCTAGCATTCCCAACCACAGA ATTATAAAGCCTAGGGctaagggctagatgtcgtgcttcggttgaaaagt gtgccgtggttaggtaggaaatcttaCCTAGGTTACGTGACATTACATTA GAATTTCAGCACTTGACCAATTAGAAGCTTtgcggattttcgaaaacaat agcaacaatatttttttgtctGCGATGGCTTTaagtacgacatctagccc ttcgagctttataaatctgtgttCCCAACTTCCCATCCTTTGTCAAACGT TTCAGAAATAGCAAAGGCGTCACTCATCTTAAAATTCGACCTCTTCATGA TGCGAAAAAAATGAACCTAACTCGTAACAATACAAAAGCACTTGTTATGA AAATATTCATTAATTTTCTTTCGTTGACAGCAACATCTTCAATTAACATC AGGCGAGAATCGAATGGCTATCCATCGTGGTAACAGATGGCATTACACGA CAGCTATCACACGTGGTTACACTCTGGTTAGTAACAACAAACCCAGTCCC TTATTTCGATGTTGCAACTTTAAATtaattgtataaaatttgccactact gggaaaagccggggtctttccgtagactttccgtagaaaacattacgtca tgaatatcatgaattgattttttcttctGGTAAACTCTAGCCCAGTCAGG tttcatttttacataagtggtgtccccgtttcatatcaggcacatatttc atattaggacaatgtctgcctattgttatttatgttgatataagcaaaaa agaaattttctttccctATTTTttaccaatcttgctccacattcctctca atccaatgtgaaaaagcttgttaattaaaattgatgagatCAAACGAGAT CAGtctcatttaaaaacaaaacctttaaattttgaTAGCGCTCATGATTG AATCATATCCATCAGTAAAAAAGTGGAAGCAAGTTCTACCCTCGCAAAGT TTCCAACCCACTCCGGCAATTTCTCCCGGGtccctaatagccgccccccc ccccccgctaatttatttttcgaaaattttccccccaggacatttttatt cccccccccccccctcttttttttttcttttttttttccccccccccccc caaattcCTCCCGGGtccctaatagccgcccccccccccccgctaattta tttttcgaaaattttccccccaggacatttttattcccccccccccccct cttttttttttcttttttttttccccccccccccccaaattcCTCCCGGG tccctaatagccgcccccccccccccgctaatttatttttcgaaaatttt ccccccaggacatttttattcccccccccccccctcttttttttttcttt tttttttcccccccccccccccgcttattaagttttgagattttttccaa ccccccggctattaggtacccgagagtacattCCCAACCCgttcatcaaa atttgaaatcattttccaGGCAATTTCAACAGGAATCGTTCCCTAGCTCA AACTTTCTCGTTGTGCAACTCATAGTTCATAAACTCATCCCCTTCATTGC TTTGGCTTTCAATATTCCAATCGTACCATACGTTGAGAAAAAGTCTTATG CTTCTTTACGATTGAATataatttttgctgaaattactaatttttaatca gatggtttgagactTTCCAGCCTGTAGATTCTATTCATGGTCCTGAGAAA GACCTCCAAATCTTTTTGTCTAAGTTTTTCCCAAGTGTAAGAACCGATTT TGAGAGTCTTTAAATTGTCATTTCTCGGCGTTGGAAAATAATTAGAACAA AATATATCACAGAAggtttactctcgggtacctgatatgccccccccccc cccggttggaaaaaaaatagaaaaaaaatattccccGAAGGTTTATCTCC GGGTACCTgatatgccccccccccccaccggttggaataaaaatattctg ggtgggaaatttttaaaaaggaggCTAAATACAGCAGAAtctagggcaaa agagggaactttcaaataCGGGGGaattggaataagaatgtcctgggtag aaaattttcgaaaaaattaattagcggggtgGGACGCTTATTAGGGTCCC GAGAGTAGGGATCAAAATTCTCAAACAAACTGATCCCTTCAAACTTCAAA ATCAACTAAAGGATGAGAGCTCCATATTAAATACTTAACGTTAATTTTGA TTGaacattatttctttaaaaagggACCTGTCTCAGCCAGTGACTTGACG ACACGAGAACGCCTTGACCGCCCTCAAGTGAAGTGCTACCAACGACACCC AGGAACTCATCTTAAAGAAGCACAGCATATTATCGAAGGAAATCACGGGC TAGATGCGTCTCTACAGGCTGTTGAACGAAATATTGGCATGCTAAAACTC ACGGAAGACCGATTAAAAACTGATATACATGACAAACATAGAGCAGCCGG TATTGACTCTAGTATCGTACGTCACCGCCGCCGACAAGCCAACCACAGAT GGGTGGTCGGAGGTCTCAGTTGTTAAAACTAGGGCCTGGAGTCCAAAGAC AGACATTTATTaacaaagaaaagattgaaTTACGGGGACAATTTTCGATA CCAAATTTGAaacatattttctaaattttatttcacttttatttttttta tttgcaaggtgatttttattttacgctgtataaatatttttttacaaggG CTTTgacaaaatcatatattttttattataaaaataaatctaTCTCCCTA CAAACAAAATTTGACTAAGTTTTTTACACCTGCCTTAcccaatatatttt tcaaagtaGGCATAACTAGCTGAAttgaaaagggggggggggtatttgAT TGAATTGATGATGCTCGCTTAAAGTAACGGCCTGGGTAAGACCCCTTATG AGAAAGACACTTTAAAGAGGTATAGGTCTGAAATAGCATACCAcagtgat tctaaaaatagacatcaaaattactgtttgtccgagttttaatcccatca tcctttgcaCTAATTATGCTTTTGCAAGTCAATtacacttattgacaata caaaagtaataacttgcacgcattacgaatcatgatgaaaagtattgtgg gattgaatttcggtaaaatgttaaaagtaataattatgacgtttgcatag cggTGTGCTATTTGGTGGAGTTATTCCTTGGATTGAATcattaaaacaaa tttcaagGGAGCATGccccaaaattttctatttttgataacGTCACTCTT GTTTTTATTAAGGAAAGATGTACAAGTTTGAGAAAGTaaatatattctta attttaaaCCTTAAAATCATGGTAATCTTCTACCACGACGAAATTTATAT TTCGACCATTCAACTTCCTTTATTCGAATACCAAGTATGCCAAATAATTT TCCTCGTCCACGTAATTTGACCATTCTTGGTTTCGATTTCTCCACTTTTT TCGTCCCCTGAAGTCCACCAACGTCATTGGTCAATTTTGAACTATTTCGA TCAATCGGTTTCTTTTCTTTAGGAGGCTGAGGACTAGTACTCACATTTGC TTTGtatttcttaacatttttcttATGCGTTGGTGACGATGACTTCATAG GACCATTATCTAATTTATCATAACTgttctttgactttttttcatcgGTA ATTGGGTTAATTTTCTCGTTAATCAAAGATTTCATACCTCTATCAGAAAT AATCGAATTTGTTTCCTTTGGGAACTTCCTTTGATCATCTTGATTgtttt ctaaatgtttatcgTTACCGTGTTCCTTAACTCCATCTGGCAACGCCCCA CTTTCAGTCGTAAGCTTTTCACCAAATGTGGATGTCATTCCCTTGTCATC AGTACCAGTCAAGTTCTTATAATTGTCATCTGAATTACTNTGTCATTCCC TTGTCATCAGTACCAGTCAAGTTCTTATAATTGTCACCTGAATTACCAGT ATCtgccaattttccaatttccagAGTCCCTATCTCTAATCTCGTAGAAT TTTCAGTTCCTGATATTAATGGTTTATTCTCCACATCAGTACTCTTAGAC GTATCTTTACCCACTATGGAGCTTTTTTTGTCTAAATTTTCATCTTGATC CGCACCTGCTATACTCACAATCAACGAATTATCTTCGCCTTCTTCCACTC CGAATAATTTTCCATGTCCTCGGCTCTCGTAAAATTCGCCTTGTTCTAAA AGAACACCGATCGATTCTTCAATTTTCTCTTGTTCCAGTTCCATTTCTCT TTGAGCCATTCTTCGGTGATGCTCTGCGAGCCAAGATGGTAGCTGAGTAT CATCATTGATGTAACCATGGATACCAAATAATCTCCCGCGACCACGCCCT CCTAACAGGGCGTTTACATGGTGTATAACAACTACGAATACCAGCAGTAG ACTGACGATATTGAATCTCAacatttctttaagaaaaaaaacaaactaaa ttaaATGATATTAAATGTTGTGTGTCTTAGTGTCGTTCCAAATAAACAGT CTAATGTCTCATTTTCACT

Coding sequence (CDS) from alignment at sc0001278:36135..48503+

>TCONS_00035241 ID=TCONS_00035241|Name=TCONS_00035241|organism=Clytia hemisphaerica|type=CDS|length=6015bp|location=Sequence derived from alignment at sc0001278:36135..48503+ (Clytia hemisphaerica)
ATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATACTATTCAGAA
CATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAATTCAACGAAT
TGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAATTGTATCCAG
CAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCGTGCTGTTGT
TATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTATCAAATCGT
TCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCATTTGAGGAAA
GATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTTGCGACCTCT
GAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGGCAGCCGAAAAAA
AGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAATTGAGTGCTGTT
CAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAGATTGAAAGCTGT
TTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCAGGGACAGTGCTT
CTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAATCGTTACCTGCC
GAACTTGAGGTCAACCCATTGGGACCATACACACCAGAAGCTGCTCAAGC
AGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAGCGTTGCTAAGGG
ACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAAAGAGATTTTCAT
AAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGAGACTGTCGCTAT
GAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAATGGCTATCCATC
GTGGTAACAGATGGCATTACACGACAGCTATCACACGTGGTTACACTCTG
ggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACGCCTTGACCGCCC
TCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATCTTAAAGAAGCAC
AGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCTCTACAGGCTGTT
GAACGAAATATTGGCATGCTAAAACTCACGGAAGACCGATTAAAAACTGA
TATACATGACAAACATAGAGCAGCCGGTATTGACTCTAGTATCGTACGTC
ACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGAGGTCTCAGTTGT
TAAATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATACTATTCA
GAACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAATTCAACG
AATTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAATTGTATC
CAGCAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCGTGCTGT
TGTTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTATCAAAT
CGTTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCATTTGAGG
AAAGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTTGCGACC
TCTGAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGGCAGCCGAAA
AAAAGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAATTGAGTGCT
GTTCAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAGATTGAAAGC
TGTTTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCAGGGACAGTG
CTTCTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAATCGTTACCT
GCCGAACTTGAGGTCAACCCATTGGGACCATACACACCAGAAGCTGCTCA
AGCAGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAGCGTTGCTAA
GGGACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAAAGAGATTTT
CATAAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGAGACTGTCGC
TATGAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAATGGCTATCC
ATCGTGGTAACAGATGGCATTACACGACAGCTATCACACGTGGTTACACT
CTGggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACGCCTTGACCG
CCCTCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATCTTAAAGAAG
CACAGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCTCTACAGGCT
GTTGAACGAAATATTGGCATGCTAAAACTCACGGAAGACCGATTAAAAAC
TGATATACATGACAAACATAGAGCAGCCGGTATTGACTCTAGTATCGTAC
GTCACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGAGGTCTCAGT
TGTTAAATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATACTAT
TCAGAACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAATTCA
ACGAATTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAATTGT
ATCCAGCAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCGTGC
TGTTGTTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTATCA
AATCGTTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCATTTG
AGGAAAGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTTGCG
ACCTCTGAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGGCAGCCG
AAAAAAAGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAATTGAGT
GCTGTTCAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAGATTGAA
AGCTGTTTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCAGGGACA
GTGCTTCTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAATCGTTA
CCTGCCGAACTTGAGGTCAACCCATTGGGACCATACACACCAGAAGCTGC
TCAAGCAGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAGCGTTGC
TAAGGGACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAAAGAGAT
TTTCATAAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGAGACTGT
CGCTATGAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAATGGCTA
TCCATCGTGGTAACAGATGGCATTACACGACAGCTATCACACGTGGTTAC
ACTCTGggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACGCCTTGA
CCGCCCTCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATCTTAAAG
AAGCACAGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCTCTACAG
GCTGTTGAACGAAATATTGGCATGCTAAAACTCACGGAAGACCGATTAAA
AACTGATATACATGACAAACATAGAGCAGCCGGTATTGACTCTAGTATCG
TACGTCACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGAGGTCTC
AGTTGTTAAATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGATAC
TATTCAGAACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACAAAT
TCAACGAATTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGATAAT
TGTATCCAGCAGAGCAATGCTGAGATACATTCATATATGAGATCGGCTCG
TGCTGTTGTTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAGTTA
TCAAATCGTTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAGCAT
TTGAGGAAAGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACATTT
GCGACCTCTGAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGGCAG
CCGAAAAAAAGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAATTG
AGTGCTGTTCAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAGATT
GAAAGCTGTTTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCAGGG
ACAGTGCTTCTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAATCG
TTACCTGCCGAACTTGAGGTCAACCCATTGGGACCATACACACCAGAAGC
TGCTCAAGCAGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAGCGT
TGCTAAGGGACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAAAGA
GATTTTCATAAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGAGAC
TGTCGCTATGAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAATGG
CTATCCATCGTGGTAACAGATGGCATTACACGACAGCTATCACACGTGGT
TACACTCTGggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACGCCT
TGACCGCCCTCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATCTTA
AAGAAGCACAGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCTCTA
CAGGCTGTTGAACGAAATATTGGCATGCTAAAACTCACGGAAGACCGATT
AAAAACTGATATACATGACAAACATAGAGCAGCCGGTATTGACTCTAGTA
TCGTACGTCACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGAGGT
CTCAGTTGTTAAATGGAGGCAACAATCGGCCAAGATTTATGGAAGAAAGA
TACTATTCAGAACATTAAACTAGCACAAGCTGTTGTTCAAAGGAGTGACA
AATTCAACGAATTGGGTCGTCAGTTAGATCCTCTCCCCTCATTAAGAGAT
AATTGTATCCAGCAGAGCAATGCTGAGATACATTCATATATGAGATCGGC
TCGTGCTGTTGTTATAAAACTTCGTGATAATTTGTTGAATACAGAAGAAG
TTATCAAATCGTTCTTGAAGAgcaaagaaaaattagaaaccGCTCTAGAG
CATTTGAGGAAAGATATTCTCTTAAATGAACAATGCCGATCAGGTAGACA
TTTGCGACCTCTGAAAGAACAGAAAAAAGACGGATGCGATGATCTTTTGG
CAGCCGAAAAAAAGACTCTTCTAAAACTGAAAAGAATACTGGAGTCCAAA
TTGAGTGCTGTTCAGCAAACACTTCAATATTTGGATAATGCTCGCAAAAG
ATTGAAAGCTGTTTTGTCGGAACGCAACCGAGTTTTAGATTTAATCTGCA
GGGACAGTGCTTCTGCTCGTATTTTGAAAGCCAAGAACATTGATCATCAA
TCGTTACCTGCCGAACTTGAGGTCAACCCATTGGGACCATACACACCAGA
AGCTGCTCAAGCAGTTGCTATGGCAACCAATGCTGTACAAAAATCGCAAG
CGTTGCTAAGGGACGTGGAGTTTACCATTGATGAAACGCGAGCTGTTCAA
AGAGATTTTCATAAAAGTGTCAACAATGGATTGACAAAGAAAGTAGCAGA
GACTGTCGCTATGAAGCAACATCTTCAATTAACATCAGGCGAGAATCGAA
TGGCTATCCATCGTGGTAACAGATGGCATTACACGACAGCTATCACACGT
GGTTACACTCTGggACCTGTCTCAGCCAGTGACTTGACGACACGAGAACG
CCTTGACCGCCCTCAAGTGAAGTGCTACCAACGACACCCAGGAACTCATC
TTAAAGAAGCACAGCATATTATCGAAGGAAATCACGGGCTAGATGCGTCT
CTACAGGCTGTTGAACGAAATATTGGCATGCTAAAACTCACGGAAGACCG
ATTAAAAACTGATATACATGACAAACATAGAGCAGCCGGTATTGACTCTA
GTATCGTACGTCACCGCCGCCGACAAGCCAACCACAGATGGGTGGTCGGA
GGTCTCAGTTGTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020564XLOC_020564Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035241-exon-sc0001278-1491911889:36135..36695TCONS_00035241-exon-sc0001278-1491911889:36135..36695Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1510915933:36135..36695TCONS_00035241-exon-sc0001278-1510915933:36135..36695Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1575043694:36135..36695TCONS_00035241-exon-sc0001278-1575043694:36135..36695Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1491911889:39238..39475TCONS_00035241-exon-sc0001278-1491911889:39238..39475Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1510915933:39238..39475TCONS_00035241-exon-sc0001278-1510915933:39238..39475Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1575043694:39238..39475TCONS_00035241-exon-sc0001278-1575043694:39238..39475Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1491911889:42674..42879TCONS_00035241-exon-sc0001278-1491911889:42674..42879Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1510915933:42674..42879TCONS_00035241-exon-sc0001278-1510915933:42674..42879Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1575043694:42674..42879TCONS_00035241-exon-sc0001278-1575043694:42674..42879Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1491911889:44365..44460TCONS_00035241-exon-sc0001278-1491911889:44365..44460Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1510915933:44365..44460TCONS_00035241-exon-sc0001278-1510915933:44365..44460Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1575043694:44365..44460TCONS_00035241-exon-sc0001278-1575043694:44365..44460Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1491911889:46208..48503TCONS_00035241-exon-sc0001278-1491911889:46208..48503Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1510915933:46208..48503TCONS_00035241-exon-sc0001278-1510915933:46208..48503Clytia hemisphaericaexon
TCONS_00035241-exon-sc0001278-1575043694:46208..48503TCONS_00035241-exon-sc0001278-1575043694:46208..48503Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00035241-proteinTCONS_00035241-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001278supercontigsc0001278:36135..48503 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.45652 2.15241 1.46655 1.11416 180.317 130.096 60.3832 60.3214 26.9801 39.5194 25.615 29.4805 3.81486 3.21635 2.00626 2.62593 3.11997 4.54085 8.41835 8.0927 6.23705 6.63266 5.45066 6.10636 115.749 66.5026 13.741 16.0654 1.57248 1.8074
Blast
BLAST of TCONS_00035241 vs. Swiss-Prot (Human)
Match: CC105 (Coiled-coil domain-containing protein 105 OS=Homo sapiens GN=CCDC105 PE=2 SV=3)

HSP 1 Score: 108.612 bits (270), Expect = 1.710e-24
Identity = 102/358 (28.49%), Postives = 163/358 (45.53%), Query Frame = 1
Query:  319 PLPSLRDNCIQQSNAEIHSYMRSARAVVIKLRDNLLNTEEVIKSFLKSKEKLETALEHLRKDILLNEQCRSGRHLRPLKEQKKDGCDDXXXXXXXXXXXXXRILESKLSAVQQTLQYLDNARKRLKAVLSERNRVLDLICRDS----ASARILKAKNIDHQSLP-----AELEVNPLGPYTPEXXXXXXXXXXXXXKSQALLRDVEFTIDETRAVQRDFHKSVNNGLTKKVAETVAMKQHLQLTSGENRMAIHRGNRWHYTTAITRGYTLGPVSASDLTTRERLDRPQVKCYQRHPGTHLKEAQHIIEGNHGLDASLQAVERNIGMLKLTEDRLKTDIHDKHRAAGIDSSIVRHRRRQ 1365
            PLP  R     Q+   +H++ R AR    +L          ++  L+ +E  +  L  +RK +L+N+Q    R  RP  E+  D  D +L  EK+ L  +KR +E  +   +  L+ L + R  L     ER + +DL+ +        AR     N+     P          +P+G Y P  A A+  A   + +S+  L ++     + R  Q      V   L +K +ET+ +K+ L +T G  R  I R  +++     T G   GP+S   L T E+LDRP V+ YQRH GT L EA  + +G   L   +  +E+N+  L  T   L   ++ K+    +D ++VR R RQ
Sbjct:  110 PLPLHRKARALQTTEVVHAHARGARLTAARLGRAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQSVKLRGYRPKSEKVPDKADSMLTWEKEELKSMKRKMERDMEKSEVLLKTLASCRDTLNFCFKERLQAVDLMNQPLDKVLEQARRHSWVNLSRAPTPRTQGQKTPPPDPVGTYNPACALALNEAKRLLVESKDTLVEMAKNEVDVREQQLQISDRVCASLAQKASETLELKERLNMTLGLMRGTILRCTKYNQELYTTHGLIKGPLSKVHLETAEKLDRPLVRMYQRHVGTQLPEAARLAQGTDKLQCHITYLEKNLDELLATHKNLSWGLNCKNIGHEVDGNVVRLRLRQ 467          
The following BLAST results are available for this feature:
BLAST of TCONS_00035241 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1051.710e-2428.49Coiled-coil domain-containing protein 105 OS=Homo ... [more]
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