TCONS_00035241-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00035241-protein
Unique NameTCONS_00035241-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length400

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00035241-protein ID=TCONS_00035241-protein|Name=TCONS_00035241-protein|organism=Clytia hemisphaerica|type=polypeptide|length=400bp
MEATIGQDLWKKDTIQNIKLAQAVVQRSDKFNELGRQLDPLPSLRDNCIQ
QSNAEIHSYMRSARAVVIKLRDNLLNTEEVIKSFLKSKEKLETALEHLRK
DILLNEQCRSGRHLRPLKEQKKDGCDDLLAAEKKTLLKLKRILESKLSAV
QQTLQYLDNARKRLKAVLSERNRVLDLICRDSASARILKAKNIDHQSLPA
ELEVNPLGPYTPEAAQAVAMATNAVQKSQALLRDVEFTIDETRAVQRDFH
KSVNNGLTKKVAETVAMKQHLQLTSGENRMAIHRGNRWHYTTAITRGYTL
GPVSASDLTTRERLDRPQVKCYQRHPGTHLKEAQHIIEGNHGLDASLQAV
ERNIGMLKLTEDRLKTDIHDKHRAAGIDSSIVRHRRRQANHRWVVGGLSC
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_020564XLOC_020564Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00035241TCONS_00035241Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..101
NoneNo IPR availablePFAMPF03148Tektincoord: 10..387
e-value: 6.6E-31
score: 107.3

Blast
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BLAST of TCONS_00035241-protein vs. Swiss-Prot (Human)
Match: CC105 (Coiled-coil domain-containing protein 105 OS=Homo sapiens GN=CCDC105 PE=2 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.620e-32
Identity = 102/358 (28.49%), Postives = 163/358 (45.53%), Query Frame = 0 
Query:   40 PLPSLRDNCIQQSNAEIHSYMRSARAVVIKLRDNLLNTEEVIKSFLKSKEKLETALEHLRKDILLNEQCRSGRHLRPLKEQKKDGCDDLLAAEKKTLLKLKRILESKLSAVQQTLQYLDNARKRLKAVLSERNRVLDLICRDS----ASARILKAKNIDHQSLP-----AELEVNPLGPYTPEAAQAVAMATNAVQKSQALLRDVEFTIDETRAVQRDFHKSVNNGLTKKVAETVAMKQHLQLTSGENRMAIHRGNRWHYTTAITRGYTLGPVSASDLTTRERLDRPQVKCYQRHPGTHLKEAQHIIEGNHGLDASLQAVERNIGMLKLTEDRLKTDIHDKHRAAGIDSSIVRHRRRQ 388
            PLP  R     Q+   +H++ R AR    +L          ++  L+ +E  +  L  +RK +L+N+Q    R  RP  E+  D  D +L  EK+ L  +KR +E  +   +  L+ L + R  L     ER + +DL+ +        AR     N+     P          +P+G Y P  A A+  A   + +S+  L ++     + R  Q      V   L +K +ET+ +K+ L +T G  R  I R  +++     T G   GP+S   L T E+LDRP V+ YQRH GT L EA  + +G   L   +  +E+N+  L  T   L   ++ K+    +D ++VR R RQ
Sbjct:  110 PLPLHRKARALQTTEVVHAHARGARLTAARLGRAQHQINGRVRQLLRQREVTDHRLSEVRKGLLINQQSVKLRGYRPKSEKVPDKADSMLTWEKEELKSMKRKMERDMEKSEVLLKTLASCRDTLNFCFKERLQAVDLMNQPLDKVLEQARRHSWVNLSRAPTPRTQGQKTPPPDPVGTYNPACALALNEAKRLLVESKDTLVEMAKNEVDVREQQLQISDRVCASLAQKASETLELKERLNMTLGLMRGTILRCTKYNQELYTTHGLIKGPLSKVHLETAEKLDRPLVRMYQRHVGTQLPEAARLAQGTDKLQCHITYLEKNLDELLATHKNLSWGLNCKNIGHEVDGNVVRLRLRQ 467
The following BLAST results are available for this feature:
BLAST of TCONS_00035241-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CC1052.620e-3228.49Coiled-coil domain-containing protein 105 OS=Homo ... [more]
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