TCONS_00034968 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00034968
Unique Name	TCONS_00034968
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	992

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at sc0001236:46355..62633-

transcript sequence

>TCONS_00034968 ID=TCONS_00034968|Name=TCONS_00034968|organism=Clytia hemisphaerica|type=transcript|length=992bp
cCGATACGGAGATTGACCATTTCCTTTTTGACATTCAGTGAATGTGGTTT
TGTTTCTTGTTGccagtgaaaataagaataggGCGATGGCACTTGGCCTT
GGTTTTCTCTACCTACTGATTCTAAGagTGTGTACAGTCAAGACGACACT
ATCAAGCCATGAGATACAAAAGATTCGAGAGAAAATATTCGATGGGTATG
ATGCAAACATTATGCCATTGGAAGAAGGGCGGCCAATCAACGTTTCGGTA
GATTTCTTCATCAATGACATGGTCCCATTACATGCGGCTTCAATGCATTT
TTCTATCGATTGTTTCTTCACACTGCAATGGCGTGACTACCGGTTACAAT
GGGATCCACCCAACAATGAAACTTATGTTCTACCCTTCGATGACAGGATA
GCTAAAGATTTATGGATGCCAAATGTTTATTTCCCAGAGCTGAAACATGG
TTATAATCATAAAGTGCCAATGCCTAACGAATTGATTTATTTATACCCAG
ATGGAAATGTTGTATATAAccaaagAATTCTAATGGATTCATTTTGCCCG
ATGAATTTGACATACTATCCATTTGATATGCAACATTGTAGACTGACCGT
CGAACCATATTCTTacaatatgaaatttgtcgtgtTGTTTTGGAGAGATG
GGAAAGCCATAGACACCAGTGAGAAAGGCAATTTATATGTTATCGACTTC
AAGGATGTTGACATGTCTTTAAATTCGAAAATTGTCGACTGGGGTATTTA
TGGTAAGTCTTGGTTATTATTTTCTTCGACAAATTTCGAGGATGTTATAT
TGTCTATCCAAGGTACacgctattttttataagaatacactttgtaaaaa
tgatgaaaatggccaaaaaaatgaagaataagctaagaatatcaccataa
tgaaattttgctactAAAGGTAAGACTgctatttttagagcattttcagt
tataaattACTTGAgacgtactctcgggtacctaataaccgG

Run BLAST on NCBI

transcript from alignment at sc0001236:46355..62633-

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00034968 ID=TCONS_00034968|Name=TCONS_00034968|organism=Clytia hemisphaerica|type=transcript|length=16279bp|location=Sequence derived from alignment at sc0001236:46355..62633- (Clytia hemisphaerica)
CCGATACGGAGATTGACCATTTCCTTTTTGACATTCAGTGAATGTGGTTT
TGTTTCTTGTTGCCAGTGAAAATAAGAATAGGTTAGTTTTTTGTTAATTT
TTTTTACTGAAAAATGATATCATTAATGCCTTACTAAGGGGTGAAATAGA
AAGGGGGAATGTGACCGAATTTCTGAAGGGTTTACTTGACTGGCCAACGG
GAATTGTCCCGGGCGGGGTCAAATTCAATTGCTTCACTATCCAAATAAAA
TATATTGACTTTTTTATAGTTGTTGACTTTCTATACTTAACCCTTTAAGT
GCCACGGTCCTTTTGTTTTTTAAAGAAAATCACTAGTTCAAACTTTAAAG
GCTTATATATCTCCGGATCTAGAAGGAGTTAGAAGCTGGTTCATAGCTGA
TTCATAGCTGTTCTGGAATAATAGAAAGGTGCCCGATTGTAAAACTTCAA
ACTAATTCGCTGGAAGACAGACTCAAGTTAATCAGGACCAAATTTGGAGG
TTCTTGGATCACTCGTTGACCAAAAATGGTCAAAAAACGGACAAAATCTT
AAAAAAGTGAATTTTTGTCAAATTTTTGCTTTTTTTTTGACTTTTTGGCT
TAAAATCTTGCTGGAAAGATTCTTTTTTTTTTTGCTTGACCATGAAACCC
AATCCAATTCCTATGAGCTAGACCAAAGATGAGGATTTCTAACTCAAACT
GGCATTACAGGACGGCTTCGCCCTCCTACATAGCCCACGTCTGATACGGC
ATTGGCACTTAAAGGGTTAAACACCGAAAGATTTTTTTGTAGCTTGAAAC
TGAAAGTTGCCTGGGCCTAAATTATCATATATAGATTCTATATGAACGTT
CCACTGTATTTATTAGTGATAATTAGTGCTCATTAGTTCAAGGACTTAAA
CGCATTTTTGCTTGAAATGGCTCCTCTTATATAGTTGTCCGTTTTTTTTC
ATTAATTGATACGGATTTTTGTCATAATATCTGGAAGCCTTTTACTTTTT
TCAATCAAAGTTTAATAGAAAGCTTACCGTCGTTTTTTACCCGAAGTTCT
GGTTATTTTCCGCTAGTAAAGTGGCAAAGGAATCTTAGTGCGGAAATGGG
AATCTTATAAAAAACGACATTAAGTCAGCAGCCTGATTTAATTTGTTTTT
ATTATATTTTAGGGCGATGGCACTTGGCCTTGGTTTTCTCTACCTACTGA
TTCTAAGGTATGGATTAATTTTATTAATTTTATGGGTTACTTTTTTTTAA
TTTACGGTATGGAGTAATTATCTTTTCATCTTTTTTTATCAGCCGGGGAA
ACTAGGGCTATAATATTTTCTTCCATTCTAGTTTATTGTGTTTATATAGA
CTGTTCTACCTACCCTAACGCTGGGAGAGGATCAGATTCGAACTTACTAG
GGCCAGAGTGACATGTATGACATCAAATGTTTGTATGTGATGGTGCGTGT
AAATGTAATGACATATTCAGATTTTTTATGTTACTTGGCCCTATACAACT
CGAAGCTAATTTCCTTTCCAGCAGCTTTTGCCGCAAGGTTTAAAATTTTG
GCTCATTGCACGTCATGTGTACTTTATCAAACTTCAAATCACTTTGAAGC
TCAAGAGCTTTAGTACGTACGTACCTACGTGCTTACCACCAGAAGGGTGT
GGGTTCAAGCCCAGGAAATTTGCTCATGATATGGCACATAGAGGTGGTAC
AGTCACTTTCGGCCGGGGTTGTGGATGGTGAAGTCTGTCGTTCTTTTTAA
ATTTTGTCATTCTTTTTAATGCTGCGAAGTAGGCACTTTCTCCCCCATGG
TAGGGGTTTCACATATTTCAAATCGTTTACTGCCCAACCTAGGTGATGGT
GACCCGTCATTTGACTCCAAATAAAATTATACAAAAAAGAAAATTGACAA
ATAATATTTCAGTTGAGACTCATAGAGACAGGTAAAGAAAACGCACTGCG
AATTCCGAATTCTTGAAAATATGTATTTTCAAAATAAACAATTTAAACAT
AAAAATATTTTGATGCACACGTAAAAATCTAAAAAATATGAAAAACTATA
CAATTTTCAAAGATATAAGCGAAACAATGGGATTATGTTTGTCTCGTACA
CACCTTAAGCTTTGTGTACGATGATACAGCAAGCCAATCTTGAGCCAGCA
TTTCCAGTTGCCAAGCTACCAGCATCACCACCACGCCCTAAATCATCAAC
GCCAGCATGGATGACAAGACCACGCCCAAAGACATTAAATTTCCCAACCA
ACGACACTTGGCGATCAAAGATATTGATATTTGAGATATCATTGGAGTTT
GCAACGATGTTTCCCAAGTCTCCAACATGTCTGATTTGGTCGGTTGGTGC
TCCTATAAATTGAAGTTAATGAAAATAAGAATCAACCATCGGTCACTCGG
ACCTAGATCTCACTCTCGGACCTAGATCGAAGGATGATGATGATGATCGC
TCACAATGGAATAGCAACTGGTTAACCTTGTACCACAAGACTTGCGCGAT
TTCTTCTAACCACATTGTTCCTGTTTCATCTAACCACACTCTTGGAACAA
AATTATACACCCCTGTCTCACAGCAACGATGATATCTTCCCAGATGTGGG
AGAACAAATCTTTTTCAAAGGGGATAGAAATTCTATTGTTGCCAGCTCGA
AAGACCCAGTGGGATATGTAATGTTTTAAATTGAACTTCAATTTAGGATT
TCCCCGGTAAAAAGTATGCTAAAAAACAACACAGGTGTGAAACACAGGCT
TCTCAGGTCACAGTGTGGATCTTAACCACGCTGAAACGACCGCACATTAT
TAACGCCTACATGTCATCTCCAGTACATTTTAGATTATTCATTGAAAACA
GATTACAATGTAGTCATTTTTCATATCTCGATTATTCAATTCCGAATAAA
AGACATTCAGGGAAAAAAAAGAGAAACACCTGGGTAATCTAGTTAAAAAA
CCGAAAGTAAATGGTAGACAAAGTAATGAGCCAAGGCAAAACGATTTAGC
CACTATGAAAGAAACCGCTTACAGCGGTCGATTACTACTTCTAATAAAAA
TTGTTTTATCAGATGAAAACTTGTGGGGGTGCATTAACGAAAAAAATGAA
CAATTTTTGGAAGGCTTACATGTCTAAATGGTAGCCTTCGGACGGTCCTT
GAAGGGAAGTAGGTTTGATTTGCTTGTGTAGTGACAATAACTCACTAGCC
TGGACACGTAACCCCTTCACTATGGTTTAGTTCGTAAGGCACCGACGAAT
AGTTTTGGCTAACAGTAGTAATCCAATAGCAAGTTTGTATATTTATACTT
TTGAGGATAGTGGAGTGACTTAAGCGTTTTGGAAAAACTTGCAATTTTGA
ACCACAAAACCGAGAACGGTACAAGTATTGATTTACCGTCGTCCTCAGTC
AATCAGGATCTAGTCAAATCACAAGCTAACCGTCTCAGTCGCAGAAAAAT
ACAGATATATCAACCTGCTAGTATTAATGCTAAGGAGCAAGGCTAGTTAT
GCTTCACAATCTTCGTAAGAGGCTACATGACAAAAATGAAAGTCTTGATG
TATATAAGTAACTTGCTATACGTAATGTTTGCTACCTATACTACCCTGTG
TGTCTTTTTAAATAAGCGTCTATGTTTAACCGTGCACAGTTTAGTATGTT
TGTCACTCCAGGAAGATAATCGTTGAGTTTATAAAAAATTGTAAAAACAT
ATTTATTTTGAAATAGAAATGAAATCTTAACCCCTTTTTAATACTGGAAT
CAACAATATGTTTTTTTGGTGTGAATTAGGTCACGTGTGCAAATCATTCA
ATACTAGGCTTAGTTGCAAGTTTTTCATCTACGCTTCTGAAAACAGAGGA
AGTATTTCGAATTATCCCGTTCGACCCGCAGAATCAAAGGCGGAAAATAA
GTCACATTCATCCACCGTCAGCCAGTCAGGACCGAGACAAACAAAGGCCT
TCATAGTTCTATTTAGATACTTTGTAGGCTGCTGGCTCCACCAACAGATC
CATACCTCTTGGTATTCGTTTTGTAGAGGTCTTCGATTCAGACTAGTTAG
TCAGTCGGGATCTAGACAAACCAAAGCCTGCAGCCTACCTAGTTCTGTTC
ACATACTATATGGTCTGCAATTCAGACTAGGTAATATATGAACACCCCTT
CTCACAGACCCGGTAGGATTTCTACAGCCAGTGGGGAAACAATTAACGGA
CTGAAACTCGATGGGGATAGGTATTCCCATATTTCTTATGGCTGGGAATT
TAGATTCTTTTGTTCTCAAGTCAGAAATTTCAGTGGGAAGAGAAATATAT
AATAATATTTTGCAGTGAGGTTTATTTGATTATTATCAATAGGGACAAAA
ATTGGAGGATACTTTCCCACCGGGGACAATATTTTAGACAATTTTTTCAG
TGGAAAGAGTTCCAAGTGGGTCTGTGAGAAGGGGATGTCTTATGATAAGC
TTACACTTACCGTGTGTTAATCCAAAGGGGTTAAAATGACCACCAAAGCT
TGCGCAACCATTGGATAAATCACCGTACTGGTGGACATGGAAACCATGTT
TACCAGCAGGAATACCTTTGACTTGGCCAGTGATTCGAACACCATTTCGA
AACTGTTTGATATTGATTGTGCCAGAGACGGTACTCGATTGAGTCAGAAT
ACAAGTGGCTTCTAATTGTTTTTCTGAAATAGGAAAGCATTCGAACTGCA
AGTAGTGGAAACAGAAAAGTGTATTTCCTTGTCAAATGAATGCTTTCAAA
CTGGAACCTAGTCCCTAAGTTCACTTTCAATGATTCAGGTAGCCCTTTTG
AAAGGTTGTATCATGTCCATCGGTAAAATCAAAATGTGGTGCAAGTGGCT
CTGGGTACGAGGTTATTGGAATGTTTTTACTTTTTCGCCACAACATCTTA
TTTCTAACGAGACCAGAAGTTTTAAGTAAAGGGACATCTTAAACTCTTAT
GACTGGAGTGATTCGTCCAACTTACCACAATTTTTACCAGTGAATCCTGC
TCTGCATCGACATGAAATGACATTCTTTCTACAAACACAATACCCACCAT
TCTTACAGATCCCTGGTCGACATCTGTTCCTTCTTGTTTGACAAAACTTT
CCGAAGAAGTCTCTTGTACATTTGCAGAAATGTTTTCGACTGTAATGACT
GTATACACATCTGCCATTGTTTTTACATAAACCACCGCATCTATCTATTC
TGGAACCTTTTTGAGTAAATAAAAGTTAAAGGTTTAAGTTTGGTATTAGA
TATGTATAATTTTTTACCGAATGAAATTCTCTCAGTTTTTGCGGAAAAGG
TTTTATTTTTGGAACACAATTTTTCGACGTTTATCAATAATTTTCGATGG
GCAGCATAGATGTTATGGGCGGTGATATTTGGCGTTGTGCATTCTGAATA
AACAGGGAACACTCAAAGTTGTCGGGTAGTAGTACCCGAAGTACTTAGGC
AAGAAAATATGGGTTGGGTGTTTGCATGTTTTAAAATTGGTTTTCCAGCC
TTTATCGAGTCTTTATAAAAGGTTACGAAAACAGCAAACGGTTGAAAAAT
ATTCTAATCCAGTCAAACAATGATAACACTATAAAAAAAGTTTGAAATCA
TAAAACTGGAAAAGCCAAGAAAGATAATTCTTAGAAATCCGACGAAAGCT
TTCTCTCTAAGAGTCACCTTTTCAGAAAGAATCTCTATAAAGGGTTCAGC
TATCTGTTTCGGATATACTCTTTACCTAAAAACTCTTGATACTTTCGCCA
GGCGCCGCGGCGGATTTTTTTTCCGTCAACGAACGAAGACCTACGCTAGC
GGCCGAATACCTTTAAAACTTTAATGTGCGGTTTTCCANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCGGAC
GAATACCTTTCTTTGCCGCATGAAAGTTTTTCGCACCAAACTGCCGTTCA
AGCAATAAATTTTTAATATTTCGAGAAATAAATTCTTTTCGTGATAAGTG
CCGCGGCGCCGCGGATTTTTTTTCCGTCAACGAACGAAGACCTACGCTAG
CGACCGAATACCTTTAAAACTTTAATGCGTGGTTTTCCAGCGGCCGAAGA
CCTACGCTAACGGCCGAAGACCTACAAATTTAATTTGCGATCAGTTTTCA
GCGGCCGAAGACCTACACAAACGGCCGAAGACCTGCAAAACTTAGAAATT
TGAGAATCTAAATCTGAGCCAGCGGACGAATACCTTTCTTTGCCGCATGA
AAGTTTTTCGCACCAAACTGCCATTCAAGCAATAAATTTTTAATATTTCG
TGAAATAGATTCTTTTCGTGATAAGTCACATGAAAACATAATGGTACTCG
GTAGCACATTTCCTACGAAATTCACCTAGAAACTCAGCATATGCTTGTGA
TTGAGTCATATACCAGATTTAAATAGCTTTTTGATATAATTTTGCGTTTC
CTCTGAAATCAATTTAAAGCTTAAAGCATGAAGAGAATTCACGGGGTGAT
TGTGTTTATGCTCTATATCTATGGTACATCTAAATGGAGTTGGTTGATCA
TTAGAATCACTTTTAAGTATCTTAACCGACATCTGAAAGCGACAAAAAGT
ATTCCTGAATCTTTTGGTTGGTTTCTTCTCCAATATTGACTTGACATCTC
TTGTCTTTTCGTACCTTGTGTCGTGGTAGCATCTATAAAACANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACATTTTATCTC
AATATCAGTTTCATGATTTTCATCACAAGAAAATGTAACAATTTCGTACT
TTGATTCGATTTCCTCAAAAATATCAGCAATCAAATCCTTCTCCATGTTT
ACAAGAGTACCATTATGTTTTCATGTGACTTATCACGAAAATAATTTATT
TCTCGAAATGTTAAACATTTATTGCTTGAACGGCAGTTTGGTGCGAAAAA
CTTTCATGCGGCAAAGAAAGGTATTCGTCCGCTGGCTCAGATTTAGATTC
TCAAATTTCTAAGTTTTGCAGGTCTTCGGCCGTTTGTGTAGGTCTTCGGC
CGCTGAAAACTGATCGCACATTAAATTTGTAGGTCTTCGGCCGTTAGCGT
AGGTCTTCGGCCGCTGGAAAACCGCACATTAAAGTTTTAAAGGTATTCGT
CCGCTAGCGTAGGTCTTCGTTCGTTGACGGAAAAAAAATCCGCCGCGGCC
CCGGGGGGGGGGGCAGTCGACCACATTTTTCAAATATTGTTTAATAACGT
TAAAACAACCCTGTTTTAGGCGAGCTAGAAGGGCTAAAATTCAAAACTTT
TCACCCGTCGGCGCCAACCATGGTGGCGCCTCCTTCGTCAGTATATCATG
GCACTATCACTTTCAAAGTGAAGCCGCAGCTCCTGTTTACCAGGTCACTC
CACTTACCATTAACTTCCTCAAATTGTGTAAGCGCTATGATGGCCAAAAG
TGAAAGTGCTGCTAATGTCAACTTCATATTTGTTGGTTAGTTATTTTCTC
TGAAGAAAAGAAAAATCGAACGTGTTAATTTTTGATATTCAGTGGAGCCT
CTATAACTCGATAACGTGAGGGGCGTACGGTATTTCGGAATTGCGGAAAT
CGACCCTTTTTTCTTCGGAAATTCGGAAATCGGGCAAAATTCCTTTGGTA
TTTCGGAATGTTGAAATTGTTTAGGTATCGGAAATCCATGAATTTTTGCT
TCGGAATTTCGGTATTATTAAGTTTTTATCCCCCTTTTTTGGAATTCATA
CATGAAAAATCAAATTAGTCAAAACGAGGGAAAATACCCGAAAAAATCGG
TATTGGAANTTCAAAGTGAAGCCGCAGCTCCTGTTTACCAGGTCACTCCA
CTTACCATTAACTTCCTCAAATTGTGTAAGCGCTATGATGGCCAAAAGTG
AAAGTGCTGCTAATGTCAACTTCATATTTGTTGGTTAGTTATTTTCTCTG
AAGAAAATAAAAATCGAACGTGTTAATTTTTTATATTCAGTGGAGCTTCT
ATAACTCGATAACGTCCCCCCGATAACCTACAAAGAGCTTAATTGAATTC
GAATTATAGTAACAACTCTCGTCCGTACAAAAAACACCGGTCTTCTATGC
ATTTCTATCGTTTCTGACTTGCGTTAATACGAAATTAGTTTATTTTGATC
ACGTGATTAAATTTTGTAGTATTTGATAACATGATCAAAAATTGAGCAAA
TTGATTGTTAACAAAAAGTTATAACAATAGAATTTTTATACGGACTATGA
TATGACTTTCTGCCATTGATTTCAAAGCCCCAAAGGGACTAGATATGAAG
TTCTTGGATGGGAAATGATGCCACTTATTTCGCATCCAAAACGCGTGTCC
TGTGTGGTCAAGCTAGATTGAAAGTATAATCTATCGCTCGATTTTGGAAA
ATATGTTGCACAAAAACAAAGAAAAGACTAGAATACGTCCTTAAATCCGT
CGTTCTAAATATGGCGCAATTCGTAAGGCCTCACTTTTTTTTGCTTGAGA
AAGGCTAAAGAATCCTCTCTAGCCCCTTCGACGCTAACTCCTTTGTACCT
ATTAAATTCTTCCAATTATTCTTCATATAGTACACCATGCCATGCCCTTG
CTGCTTTCACTACACTTGACTAGCTAATTTACATTCCTTTTATACCCTGA
TATACTCAATTAGCCGGTTGAGATATAATATTAATGGCGACCGCAATAAT
TAGCAAAAGCTAGATCACTTATAACGATTTCCGATAGAGAATTTTTTGCA
CTTTTTTTTGTAATACATACTTATGTCTAATCAACGCAAATTATAATATT
GACATTAGAAATTGCCAATGAAGTCATCCTTTTGATGTTATAAAAGTTTT
AAGATTAAAAAAAAGATCCTATACTGTAGTTTACGACCGTCGTTTTTGGT
AGCCCCGTATTTGAAGGCATTTCAGCACAGATAAGAGTCCTTGATCACAC
CAACACGCCAAAATAAAATTCTCATCACGCCATCACACTAAAAAATTCCC
TTTCCAATCATGTATCGCATTTGTTTTAAATCATACATCACGCCATCACG
CCAAAAAAGGGCCCAATCACGCCCCATCACGCAAACCACTGGGGGCCTCA
AATTTAGATATTCAAATGATGAGATACAGTTGTTTCTAGCTGGGTTTCCA
TTGTATACATGATTACACCCCTAACTCGCAGCGCCGGTGAAACTTTTCCC
CACAGCAGGGACAAAAATTTCTATTGAAATCTCAATGGAGATAAAAATTC
TATTGTTCTAAGATTAAAGAATCCAATGGGGATGGTTTTGGAGTTCAACT
TTTAAACATTGAATTTCGAATGAGGTGAAATCAAAGTCAATTTCCCAGTG
GGGCCGAAATTCTCAGGTATAGTGGGGTTGGGGTCTCATCGGATCTGTGA
CACAAGGGTGTATGACTAAACGACGCAGACAACCAAAAATAATTTAGTAA
TCATTTTTAGATTTTTAACTCCCCTGAAATATGTGTTATGTTTCCTGATT
AAATCCATCTTCCCTTTCCTAAGCAATATCATCGAACTTTATTCTTTAGA
CTTCCTTCGTCTGCTGACTGAATAAGATACTGTGAAAATTGACAAAAATT
ATTAAAATCGATTTATTTCAGCTTTGGTAAAAGTAAAAAAGCAGAAAAAA
AGCTGAAATTTAGCAAAGAAAAAATTGGGATTTTGCGTAGGCCAATAACA
AAAGGATCATGATTTTATGATTTATTAAACGAATGATTTGGTCGTATTCT
TTCAGCTTAGATAATTATTAGATTGCTTTCCAATCTAAAAGTTGCAATGA
TTCGTTCATTAAAAATTGAATTTTGAAACATGAAAGCTTTGATTTTGTTG
TGTCATCTTCCTTGTCGTACCAGTTTGGAAATGGCGAACAGTACGCCGAA
TATAATCGGATCGAGGCGATAATTACTTTTGCGTATTGGCGTAGGAGTGG
ATATAAAATAAGATATTGGGTTAAGTCAGAGCTTTTCAAGACGAGAGGAG
TACCGCCATTCTAACGCCCGATTTAATTACGCTATGTTTAAGCGTGCGTC
AACAATTACGTAACCCAGACATCAGCCCAAGTAGCCTTAACAGTAAAACA
ATTTAAAGCTAATCAGAGGGACTAAAGAATTTCCGTGTTGAGCAGGTTAT
CCATTCCGGAGAGTTATACAGGCTGTTATCCATCTAATTCATCAATAATT
TTCAAAAATCACCCAAATTCGGAAGCCAATTAAGAGATTTCAAGCATGTC
TCTCATTTTAATATCAACGATATCCTAAATTTCCACCGAGTTAATTAATC
AATATTCTAAGACCTTTGTTTTGCCTCGTCACGACCGGTATTTAAATTTC
CGTGTCAATTTTCGTCTAACGAATCATTATTCTACCAATTTAGAAACTAC
ATTAACATTTTTGATTGTATGCTACACAGTGTTGTATAGTAGCCAGGAGA
GGCGTAACTACAAAATATGAATATACCTATATTATATATATCTCTAGCTT
GTTCTTCACCCATTTAATTCTCAGATTCAGCAGTTGATGCTAAAGTATAT
ATATGCTAAGCATTGTAAAATTTTCACTAAGTCAAGTTTGACAAAAATAG
AAGTTTCGAAGTTTTAAGTCTACGACATAAGACTTCTATGCAACGGCGGC
TACAAAAGTTCCTCAAGATTAATGTCTGAGAATATTTCTTTTCTTATTGT
CCCTCTTATGGGAGTAATTGCTCTCTGTAATGAACATATTTAAATACCTT
TCGTAAATGTCGTATGTGTGGGTCATCAGTCAGACTCAGAATCATTCATT
CGGTCTACCATTCAAGAGCCCCCCAGCGGTAAGGCAATTTTTTGGCAATC
ACGATCACGAAAATCAGCAAAAAAATTGGATAATCACGCATCCCTTTAAA
AAAGTCTAAATCACGCATCAAGATCATGTTTTGATCACGCAATCACGGAA
AAAAATTCCAAATCACGTAATCACGCTAGAACAAAGTCACGAGAACCGCT
TAGGGGACTCATTCAAAACCATTAAATCTGCAATGCCATGGTTCTTTTAT
ATCCTGACATGAAGTATATATGTTACATTTATTAAATTGTGATGAGATTT
CCTGGTCCCTTTTGTGCAATGATATATATATAACCTACTTCTGCATGCCC
AATATAGGGAAGGAAGTTTGTAGGAGTTCAAAATACTGTCAAAATTTTGG
CCAAATCCCGGAATCCCGAAAATTGAAAAAATAATGACACGGTCACATCG
GCTTGTAGAGGTTAAAATACTGGAATACTGACAAAAAAATAAGGACAATC
ACCGTCACCGTCTGATTTTAAAATCCCATTTTTTTTTTCGTCAAACCCCA
TAATACCGTACTGAAAAAGGGCCAATTCCATCACACCGTAAAAGTACAAC
ACAAAATATTTTGTGCCAAACTTTCCCTCTTTCCAAAGGTTTGAACTACT
GGAATGCCATTGAAAGTATTGATTTTCTCGCAATTAAAAAATGCTCCTAT
AGGAATTTCTTTGATGACTACCCTTATGCTGTTTAATTTCACGAAATATT
TGGCAAAAATATCTTTTTGAGAGGATGTTTTCATTTTCTTGAAAAGAAGT
TTTCCAAGCTGGCAAACGACGTTGTTTCAACGTTCATCTGAAGTTATATG
GACGTTGTGAACGTCGAAACAGCGTTGTGTGCCAACTGGGCTTCCTTTAA
TTTCAGAAGGGTAGATGACTACTTCTCCCGGTAAGGAGTATTGTGCACTA
AATCACCACCTTTAGCGTAAAAATAGTTTTTAAATGAACCATAAAATTCA
GATAAAGGATAAAACAACGGAATTGACTATCAATTTCCTACTGCCGGTGT
AAATAAATGATAGGGCCGTGGATATTACCGTGCCGTGTGCAAAAGATTTC
AGCATTTCATAAAGAGGATACATCAATTATTGTTTCTAATTACAGTAATC
AGGAATTCTGCTTAATTTTCCGTTAAAACTGAACTTCCTTGGACACTTGG
ATTCTCTAATAAGCCCAATTTTCCGAAAATCTTTATCTGATAGGGTCCAC
TTTTCAAACTCCAATGTACGTCCCCGTCGGCCGTCAAGGTCAGTGCCCCC
GGGCTATGATTCCCAAATGTATAGCAGTAATTACTAAACTATTAATTATG
GTAATGTTACTCTAATGGAATCAAAATAATAAACATATCTTTATGTTATG
ATTCTCTATCACGACTCTTTTTTAAAAAGCATTGATGACATTTTTTAGTT
TTGTTTTCAACGACGGGAATAAAAATATCAACTTTGAACTTAATCCAAGA
TCTTGGATTGTCGTCATGGTTACTTTTCTCTGCGTTGATTGCGCGCTGAA
TAGAATCTCGATTGGTTGGCACAGGTCGGAATATGATTTCGGCATGTGCT
TTCCACGATACCTCGTCATAAGCAAAACCGTCGGGAACTTTGAGCCCAGC
CGGTAATGCATTGTCCTCTTTCAAAGCGCATAATCTCTTTATCTTTTTCG
AATTAGTTAGTCTCTACCGTGAGCAGCACACTTAAAAGCTTTCTCTAATT
AATCAAACACCTGTTGCGAAGGACTATGATAATTGTATGTCTCAATATCA
CATTGCTACTTGAAGAATCGAAATAGAGAGTATAAGTTAAGCATTAAGTT
AAGCTTTAGCAGATTATATCATTACATACATCTTGTTTTTTTTACAATAC
TATTGTGACTTTTATGTATCCGTCTATTTTTTCTCACTTTTCCTTCTTGT
AACCATTGTTGCTGTAATTCACTCGATTTAAAAAGGTTTGTTTTTAAATA
AGAGTGATATCGTTTGCTTACTCATCAATTTTAATTTACAAGTTTTTTCA
AATTGGATTGACACCGATGTGGAGCAAGACTGATCAGAAAGAGGAAAAGA
AAATATTTTTTTGTTTATATCAGCACAATATAACAATAGGCAAAGAATGT
CCTTATATGAAATATGTGTCTGATATAAAACGGGAATATTTATGTAAAAA
AAAAATCTTTAATTTTAGAGTGTGTACAGTCAAGACGACACTATCAAGCC
ATGAGATACAAAAGATTCGAGAGAAAATATTCGATGGGTATGATGCAAAC
ATTATGCCATTGGAAGAAGGTAGGTTTCTTGCTATATGGTTGCGGTGCGC
AATGTTTAGAATTTTAGCCACCACCTGGGACTTACTGCTTAATTCTTTAG
TCGTAAGACAAGCGTGGATGATCACTACAAGGATTTTAGTGGAGTAGGTA
GGAGTATGTACAATATAGCCGTGATACAAAAAATTAAAACAACATGCATC
TAATACTGTCTTATTATTATCTACGTTAGCAGCTGGACTTTGCCCTTCTT
TTGTGCCATACCTGATACTCATAATCTGATTTTCTCAAAAAATTTCTTCC
AACCAAGTTTATTACAGTAAACACTTTCTCTTGTTTAAGGGCGGCCAATC
AACGTTTCGGTAGATTTCTTCATCAATGACATGGTCCCATTACATGCGGC
TTCAATGGTAAGTCCCTTATAGAGTTTCTAACAGTTTTACTCTTCATGAT
ATGAACAATTGCAATGGCATACATCACATCACAGACCCGCCATCTGATTG
GTTGTATGCGACGTAAAATCAATCAATTCGCTTGCAACCAATCAGCTGTT
AGGTCTACGGGAGTCAATACAATAATGCTTACCATGAATAATTCTTGAAC
TTTTATAATCCTTTTGTATTCCAGCATTTTTCTATCGATTGTTTCTTCAC
ACTGCAATGGCGTGACTACCGGTTACAATGGGATCCACCCAACAATGAAA
CTTATGTTCTACCCTTCGATGACAGGATAGCTAAAGATTTATGGATGCCA
AATGTTTATTTCCCAGAGCTGAAACATGGTTATAATCATAAAGTGCCAAT
GCCTAACGAATTGATTTATTTATACCCAGATGGAAATGTTGTATATAACC
AAAGGTAATTATTTTTGCTATTTAAAACTCTGCTTGCCTTTTCTAGAGGA
TGTCCTTTGCGATGCAAGTATTCTAAGGAAAACAATATATACAGTGGAAT
CGCTCGTTAACTCAAACCTCTATAACTTTAACGTATCCTTAACTGAAACA
AATTTGCTACTCTACAACTTGATATTTCCTTGACTCGAACGAATTTGTGT
TCCCCGTGTTCAAATTATGACTCTCATGGAGACTCCACTGTACATGTAGA
TTGTGTCTGTTCAATATCGCACCCGGACTACCCGGAGCCACGTGTATCAC
TTTGTGGTTTTACTAATGGACTTGATACAATCAGTATAATAAAAAATGAG
AACTAAGGGACTGGATTCGAGCTTGGTGCTTTTTGCTTCCCATGTGCCTC
ATTTCATTTGTTACGTTTATTAGGTACTTGGTTCGTTTATTCATTCGTTC
ATTTGTTCATTTGTTCATTCGTTTATTCGTTCATTCGTTCATTCGTTTAT
TCGTTCATTCGTTCATTCGTTCCTTCGTTCCTTCCTTCGTTCATTCGTTT
ATTCGTTCTTTCGTTCCTTCGTTCATTCGTTCATTTGTTCCTTCGTTCAT
TCGTTCATTTGTTCATTCGTTAATTCGTTCATTTGTTCATTCGTTTATTC
GTTCCTTCGTTTATTCGTTCATTCATTCATTCGTTTATTCGTTCTTTCGT
TCCTTCGTCCCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTCCTTCGTTC
CTTCGTTCCTTCGTTCATGTCCATTCGTTCATTCGTTCACTTGTTCATTC
GTTTATTCGTTCACTCGTTCATTCGATCACTCGTTCATTCATTCCTTCGT
TTATTCGTTCATTCATTCATTCGTTTATTCGTTCCTTCGTTCATTTGTTC
ATTCGTTTATTCGTTCATTTGTTCATTCGTTCATTGTTTATTTTGTTGAT
TGTTTTTTGTCATTGCGTTTACATTAACATTCATTTTTATTGCGTCATTT
TATGTCCTCTGTTTCCAAGAAAGGGATATCTCTGGCATCTCTATTGTAGG
AGACTATCCTGAATTTTGGGGAAAATTTCCTGGAATAACCCAATCCCATT
CCTATATCAAAAGATTTAAACTATAAAGATTCTTTGTTTCAGAATTCTAA
TGGATTCATTTTGCCCGATGAATTTGACATACTATCCATTTGATATGCAA
CATTGTAGACTGACCGTCGAACCATGTAAGTAAAATTGTTTCTTTTATTC
GGGATTATTTGGCAAAGGGGCATGCATGGGGCATTAAACCAGTTATTATT
GGAATGTTAAGCAAACTTACCATAATATCACAATTCGATCCAACAGCAAA
TAGCGTTTATTACGGCTGCCGAAAACAAAAATGTTTTCTTACGATTTGGG
GTTCAAGGAAGCTGTGGAAAGTGCTATGTGTGTGCACCCCCCCCGCCGAC
AACTGACTAAGAAAGACTTTTTATACTTCTCCTCACATTTTTATTCTTCT
TGCAGTGACTCTTGGTGTATGAGAATTTCTATTTACCCTCTTTAGATTCT
TACAATATGAAATTTGTCGTGTTGTTTTGGAGAGATGGGAAAGCCATAGA
CACCAGTGAGAAAGGCAATTTATATGTTATCGACTTCAAGGATGTTGACA
TGTCTTTAAATTCGAAAATTGTCGACTGGGGTATTTATGGTAAGTCTTGG
TTATTATTTTCTTCGACAAATTTCGAGGATGTTATATTGTCTATCCAAGG
TACACGCTATTTTTTATAAGAATACACTTTGTAAAAATGATGAAAATGGC
CAAAAAAATGAAGAATAAGCTAAGAATATCACCATAATGAAATTTTGCTA
CTAAAGGTAAGACTGCTATTTTTAGAGCATTTTCAGTTATAAATTACTTG
AGACGTACTCTCGGGTACCTAATAACCGG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_020357	XLOC_020357	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001236	supercontig	sc0001236:46355..62633 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.278031	0	3.07813	0.193184	0	0	2.57212	0.663602	0	0	0.542343	0	0	0	0	0

Blast

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BLAST of TCONS_00034968 vs. Swiss-Prot (Human)
Match: GBRT (Gamma-aminobutyric acid receptor subunit theta OS=Homo sapiens GN=GABRQ PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.796e-27
Identity = 61/192 (31.77%), Postives = 101/192 (52.60%), Query Frame = 2

Query:  164 IQKIREKIFDGYDANIMPLEEGRPINVSVDFFINDMVPLHAASMHFSIDCFFTLQWRDYRLQWDPPNNETYVLPFDDRIAKDLWMPNVYFPELKHGYNHKVPMPNELIYLYPDGNVVYNQRILMDSFCPMNLTYYPFDMQHCRLTVEPYSYNMKFVVLFWRD-GKAIDTSEKGNLYVIDFKDVDMSLNSKIV 736
            +QKI +++   YD  + P   G P+ V +  ++  +  +   +M ++I  FF   W+D RL +      T  L  D R+ + LW+P+ YF   K  + H V + N +  L+PDG V Y  R+   + C ++L  +P D Q C L VE Y Y ++ ++LFW D G AI  +E+  L++  F  +  ++ SK V
Sbjct:   59 VQKILDRVLSRYDVRLRPNFGGAPVPVRISIYVTSIEQISEMNMDYTITMFFHQTWKDSRLAY---YETTLNLTLDYRMHEKLWVPDCYFLNSKDAFVHDVTVENRVFQLHPDGTVRYGIRLTTTAACSLDLHKFPMDKQACNLVVESYGYTVEDIILFWDDNGNAIHMTEE--LHIPQFTFLGRTITSKEV 245

The following BLAST results are available for this feature:

BLAST of TCONS_00034968 vs. Swiss-Prot (Human)

BLAST of TCONS_00034968 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GBRT	1.796e-27	31.77	Gamma-aminobutyric acid receptor subunit theta OS=...	[more]

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TCONS_00034968 (transcript) - C. hemisphaerica