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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00034851 ID=TCONS_00034851|Name=TCONS_00034851|organism=Clytia hemisphaerica|type=transcript|length=1191bp
CCGCCATCAAGAGTCGCCCATATTTTACATCAATatgggaatttttttct
tcacttttatcttttgaaaaagagCAACTAATGCTCGCAACATCCATCGT
TTTCGAAATATAAACGTAGATAAACTCGTTATCTGGCACTTAGGTGCAGA
AATTCTAATCCGAcatgctaaagctctgaagTTCCTGAACATTTTCAACA
ACTGAAAGATTTTGAGATTACGGAACCATGCCTCGTTTTAGGGGATTGGC
GGGTCTAACTGAAATATGTTTAGGTTTACGTGCAAGGGAAGTTGAACGCA
ACTGGGGGTGCTCCCACATCAAAGACCGACTATCAATCAACAAAATTGGC
TCCCTCTTTTgggctttagcgtgggcggctgGGCGTGGACGGCTGACAAT
ACACCACTAGATAAGTAAACTCGACAACAAACGAAATAGTGAGGTTTgtc
acaaaaatacttcagatggtgataaaagcatgaaatttagcacagatgat
ccttagagggtctaaaacttaatttcaaACAGTAACACTAAATTTTCCTA
TGAATTCATGTATATAACATCAAATTTGGTTAAtttgttccaaaattacg
aggttttaTTAAGTTTTGACTGGAAAAGCTTGCGATAACGccatcacaaa
actttcaatcttcataacttttgataggaagattttcaaggcatgtttta
tacctcaattttcatcagcatttcatgctctttccgctaaaaccatcaga
tttttaatattttcaaaaaaataaatttttgcacagccacctgatgacgt
catctagCAGGTGGCCAGCTTGCAAAATttagtgttactgtttaaaatta
aaatttagaccctctaaggatcatctgtgccaaatttcatgcttttatca
ccatctgaagtattcttacgttcttatgtgctaacagacctcactaaaAA
ACGAACGGACATACCAAAGATTCACTTTCCTTTCCAGTATATACTCGTGA
AGCCACAACAACTTTCAATCTAATACGCTAGAAATCATTAAGCAACCATG
CCACCATGCAACCTCATACTCATTTAGCAAAAAACTTTCCAGTACGCagc
ttttcattaaaaaatgattaCTTATCAgagattgttttgaaaaacaaaac
ttcGTTTTCAAAGCACAAAACAAAAGCACAATGGACAACGc Run BLAST on NCBI transcript from alignment at sc0001226:73584..74774 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00034851 ID=TCONS_00034851|Name=TCONS_00034851|organism=Clytia hemisphaerica|type=transcript|length=1191bp|location=Sequence derived from alignment at sc0001226:73584..74774 (Clytia hemisphaerica)
gCGTTGTCCATTGTGCTTTTGTTTTGTGCTTTGAAAACgaagttttgttt
ttcaaaacaatctcTGATAAGtaatcattttttaatgaaaagctGCGTAC
TGGAAAGTTTTTTGCTAAATGAGTATGAGGTTGCATGGTGGCATGGTTGC
TTAATGATTTCTAGCGTATTAGATTGAAAGTTGTTGTGGCTTCACGAGTA
TATACTGGAAAGGAAAGTGAATCTTTGGTATGTCCGTTCGTTTtttagtg
aggtctgttagcacataagaacgtaagaatacttcagatggtgataaaag
catgaaatttggcacagatgatccttagagggtctaaattttaattttaa
acagtaacactaaATTTTGCAAGCTGGCCACCTGctagatgacgtcatca
ggtggctgtgcaaaaatttatttttttgaaaatattaaaaatctgatggt
tttagcggaaagagcatgaaatgctgatgaaaattgaggtataaaacatg
ccttgaaaatcttcctatcaaaagttatgaagattgaaagttttgtgatg
gCGTTATCGCAAGCTTTTCCAGTCAAAACTTAAtaaaacctcgtaatttt
ggaacaaaTTAACCAAATTTGATGTTATATACATGAATTCATAGGAAAAT
TTAGTGTTACTGTttgaaattaagttttagaccctctaaggatcatctgt
gctaaatttcatgcttttatcaccatctgaagtatttttgtgacAAACCT
CACTATTTCGTTTGTTGTCGAGTTTACTTATCTAGTGGTGTATTGTCAGC
CGTCCACGCCcagccgcccacgctaaagcccAAAAGAGGGAGCCAATTTT
GTTGATTGATAGTCGGTCTTTGATGTGGGAGCACCCCCAGTTGCGTTCAA
CTTCCCTTGCACGTAAACCTAAACATATTTCAGTTAGACCCGCCAATCCC
CTAAAACGAGGCATGGTTCCGTAATCTCAAAATCTTTCAGTTGTTGAAAA
TGTTCAGGAActtcagagctttagcatgTCGGATTAGAATTTCTGCACCT
AAGTGCCAGATAACGAGTTTATCTACGTTTATATTTCGAAAACGATGGAT
GTTGCGAGCATTAGTTGctctttttcaaaagataaaagtgaagaaaaaaa
ttcccatATTGATGTAAAATATGGGCGACTCTTGATGGCGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00034851-exon-sc0001226-1491911889:73584..74774 | TCONS_00034851-exon-sc0001226-1491911889:73584..74774 | Clytia hemisphaerica | exon |
| TCONS_00034851-exon-sc0001226-1510915933:73584..74774 | TCONS_00034851-exon-sc0001226-1510915933:73584..74774 | Clytia hemisphaerica | exon |
| TCONS_00034851-exon-sc0001226-1575043694:73584..74774 | TCONS_00034851-exon-sc0001226-1575043694:73584..74774 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001226 | supercontig | sc0001226:73584..74774 . |
Blast
The following BLAST results are available for this feature:
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