TCONS_00034839 (transcript) - C. hemisphaerica

Overview
NameTCONS_00034839
Unique NameTCONS_00034839
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2721

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00034839 ID=TCONS_00034839|Name=TCONS_00034839|organism=Clytia hemisphaerica|type=transcript|length=2721bp
CAACAACGTTTCGCAGATGAGAAAAGAAGTGTGACTGATTAAGATTATCG
TCAGCAAACTAAAcactcaaaaaaaagttttcaatataTATAGATACTGT
GTGTTGTTTTTCAACAATTCGTTATATCATGAGATAtaatataaagattg
aagagaTGATTCTATTTTTATAAAACCCTTCGGGTTGTCTTGTAGTCGTT
GGCTCTGCTTGTTGATAGAGGATTTATTTTAAAAGTGGTTGctgagaaaa
gttgaaatctaGTGACTATAACTTATCACTGTTTCAAAGCAGAAGGTATT
TTGACCACTTGGTTTTAAGTGTATCCTTATTTCGTATAAAGTAAAAAGGG
ATCAAATTCTCATTCATATTTTTGACGTGTGTATGAAAGGTTGTCATTAT
GTCGCATGGGAAAGAAGATAATTCGAATGATGATAAACCAACAAGCACAA
GACGAACTATTCTATATTGTGTATTTGCAGTGTTCGTGTTAACCACTTTC
AGCACTGGTTTATATTACTGCGTGGAAATGATGAAAACGTTACAAGACGA
TCAATTGAAGNGACCACTTGATTTTAAGTCGAGTGTATCCTAATTTCGTA
TAAAGTAAAAAGGGATCAAATTCTCATTCATATTTTTGACGTCTGTATGA
AAGGTTGTCATTATGTCGCATGGGAAAGAAGAGAATTCGAATGATGACAA
ACCAACAAGCATAAGACGAACTATTCTATATTGTATATTGGCAGTGTTCG
TTTTAACCACTTTCAGCATTGGTTTATATTACTGCGTGGAAATGATGAAA
ACGTTACGAGACGATCAATTGAAGTTAGAGGAAAGGGTTTTCGatcttga
aaaacaaaataaagatgTTTATAATTTAATGTTATTGATGACCAAATCCA
TGCAGAATATTACACTCAAAGTTCGACAGACTGCGGAAAATTTGAATTCG
GACACTTACCGGACACATCCGGACAACCATCGGACATTTCGTGAAAGGAG
AAATATAAATAATGCACCGCAAGCGATTCCAAAAGGACGAAGTGAAAATT
CACCTCAGGAGAATGAGCTGCAGAGAACTATACATAGTTTTCGAAGAGAA
ATGTTCTCCTTGAACGACAGATTACGAGCATTATTGAGGTATAATGACAA
AACGGACGTCACAGGGCCACCGGGAAATCCCGGATTACCTGGCAAGCCCG
GACCACCAGGATTACCTGGAAACAACGGACGAGATGGATATCATGGAACA
AGAGgTGAAATCGGCTCACAAGGGCCAGAAGGAAAACAAGGACCACTCGG
ACCGCCTGGTAAAGATGGTTTGAACGGAATTAACGGTATTCCTGGCCTAC
CCGGATATAAAGGACAGAAAGGTGAAAAAGGAAGCTCCGGAAGAAACGGG
AGAGATGGTAACAATGGTCTTCCAGGACCTATGGGGCCGACCGGACAGAA
CGGACGCCAAGGTGTACGCGGCTCCAAAGGAGAACCGGGGGAGTGCGGAC
CCTGCTATTTCAACTTTCCACGCGCGGCCGAAACTATCCGCGATGAGGAG
AGAGAGCAAATCCAGCCTCATGTTACGTATACCAAATGGGGATCTTCAAA
TTGTCCAGTAGCGAATAAATTGCTGTACTCAGGACATATCGGGATGAGCA
AATACCGACAACCGAATGGCGAATATACCGGTTCAAATGTCGTCTGTGTT
CCTGTCAATTCAAAACGACGAATCACAAAACGACAAATCTTCGCCGACTT
AAATAACGAAGCGTATTCGTATTTCTTGAAACCGAGAGTTGATAAGCCGA
CCAAAAAATGGGAGTCGGTGAATAAAACGACCGAACAATCTGAGCCGATT
CTCAAATTCGAAAAGACAAATCGAACGACAGAAGGATCGTTTGTTGACGA
CGGAAAACGAGAAACGACTACAAATGAAACGAATAACGAAAGCATCACAA
CAAAGGAAATTGAAGGACCTACTGAATCACAGACGAAAAGTTCGGTAAGC
AATCAAGAAATTCTTGGAGGTGGGAAAACGACAGGTCAATCACCATCAAC
TTCACAAGCAATAAGTTCAAAAACAAGCGTTCATTCTCCTACGAGATCAC
AAACGACAAGAACTCGTAGAGAAACAGCAGTTCCAACCGAATCGCATAGA
AAAACGACGACAACAAGTACACGAGAAACGACAACAGCAACAAAAGACAC
CCCACCGAGAAAGGAGACCTCACCGAATGCAAAACAACAAAGCTCGTCGC
CTTCACGAGGGCAAGGTCAAACCAATACTGGAAACCCGAGCCCTAGCCGA
CAACAAACGACAAATGATAACGAGTATAACGAAGAACCGAAATATATCCC
GAAATACGCCGGCATGATCGGAACGCGAAAATACATTCCGTGCGCTGTGT
GTGACGTTGAAGAACAAAGCGACCAAATTATGATCCCCGCCCAAACTAGT
TGCCCGCCTGAATATGAAGTACAGTATCAAGGCTATTTAATGAACTATCA
TCATGGAACACAGGCTGCTAATATCATCTGTGTTAATGATCAAGCGTTAG
GTATCTCACCTAGCTCTGATGCGGGGATCCGAAAAATCGTTTCCAAATAT
TTATCCCACATTGTTGTGGATTGTACAACTTTCCCATGCCCACCTTTGAA
TCATGCCGAACTATTGAAATGTGTCGTTTGTTCAAAGTAAGGTAATATCA
AAAGGACGTACAGTAGCAGCG
Run BLAST on NCBI

transcript from alignment at sc0001226:7896..22136+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00034839 ID=TCONS_00034839|Name=TCONS_00034839|organism=Clytia hemisphaerica|type=transcript|length=14241bp|location=Sequence derived from alignment at sc0001226:7896..22136+ (Clytia hemisphaerica)
CAACAACGTTTCGCAGATGAGAAAAGAAGTGTGACTGATTAAGATTATCG TCAGCAAACTAAAcactcaaaaaaaagttttcaatataTATAGATACTGT GTGTTGTTTTTCAACAATTCGTTATATCATGAGATAtaatataaagattg aagagaTGATTCTATTTTTATAAAACCCTTCGGGTTGTCTTGTAGTCGTT GGCTCTGCTTGTTGATAGAGGATTTATTTTAAAAGTGGTTGctgagaaaa gttgaaatctaGTGACTATAACTTATCACTGTTTCAAAGCAGAAGGTATT TTGACCACTTGGTTTTAAGTGTATCCTTATTTCGTATAAAGTAAAAAGGG ATCAAATTCTCATTCATATTTTTGACGTGTGTATGAAAGGTTGTCATTAT GTCGCATGGGAAAGAAGATAATTCGAATGATGATAAACCAACAAGCACAA GACGAACTATTCTATATTGTGTATTTGCAGTGTTCGTGTTAACCACTTTC AGCACTGGTTTATATTACTGCGTGGAAATGATGAAAACGTTACAAGACGA TCAATTGAAGNGACCACTTGATTTTAAGTCGAGTGTATCCTAATTTCGTA TAAAGTAAAAAGGGATCAAATTCTCATTCATATTTTTGACGTCTGTATGA AAGGTTGTCATTATGTCGCATGGGAAAGAAGAGAATTCGAATGATGACAA ACCAACAAGCATAAGACGAACTATTCTATATTGTATATTGGCAGTGTTCG TTTTAACCACTTTCAGCATTGGTTTATATTACTGCGTGGAAATGATGAAA ACGTTACGAGACGATCAATTGAAGTTAGAGGAAAGGGTTTTCGatcttga aaaacaaaataaagatgTTTATAATTTAATGTTATTGATGACCAAATCCA TGCAGAATATTACACTCAAAGTTCGACAGACTGCGGAAAATTTGAATTCG GACACTTACCGGACACATCCGGACAACCATCGGACACTTCNCCGACAAAC AGCGGAAAATTTGAATTCGGACACTTACCGGGCACATCCGGACAACCATC GGACATTTCGTGAAAGGAGAAATATAAATAATGCACCGCAAGCGATTCCA AAAGGACGAAGTGAAAATTCACCTCAGGAGAATGAGCTGCAGAGAACTAT ACATAGTTTTCGAAGAGAAATGTTCTCCTTGAACGACAGGTATGGCTATT AATTCCCAACATTCTTTTCAAAGTTTGGATtaagagttaaaaaaatatct ttcccTTGCGCGATAGTATGGTTGCCTTTATTATGATTGATATTTCAACT CTTGGTCTTACGATTAGGATTGAGCGTTGTATTGCTGTAATGTTTaagaa agaaacaaaacttGAAGTGATATAAACTAGTAGGGGGGGGTGggatttgt tcgtttttttaggtcgctcgattgttttggtcaaagcatTTGTtacacat ttttggaaagctaaggagtaggggaatcaaaataacttaggctccaattt ttttttggacactgGTATGGTACTGGGTAAGGGAATAGGGTGCATCGCCA CACAGATTCGTTGGCTCTGCATCAGAATAGATTTCAATAAAGAAGAGTAG AAGCAGTTACTAATACGCACCGTAGGGCTTTACGAGGTCAAAGAAATCTT ACGTGCTTAGTaaaaaaaggtttgttattgaaataattttttttcccgcT AACATCACTATGGGAAGGATGAAGAAAAACTTGGGGACGGGAAGTTAGAA CATGGATCATAATCCAGTCTTGACACAAGAGGAAGGTCCTAACTTCTTTC ACTCAAAGTTGTTTTTACAATATTATATCTATATTTAATAGGAAAGTTGA TGTGGCTTTTCAGATGGGTGGACGATGTTTAGTTTTACATCAATACGTCA GAAAGAGTGTTGTGCTTCTAAACGACAGAATAAACCTCTGCGATCAAAAT ATTGCTTGTAAAAAATGTTCATATTATAGCAATACAAAATGAAAAGCTTC TTAGGAAACACATGCCTGGGGGCCACAGATTTCCAGGTCTGAAATGGTTC TAAACTGTGATCTTTGTTCGTCACAGTCCCATTCCTGTACCCGATCCATT GAAAAGTCCCGTTGGAAGTTTTTTGGCTATTGGTTTATCACTATTGCAAT TGCAATACACGATTTGTCAGTTggctttctctaattcgatctcaAAGGGA CCAAAAACTATCCTAATTTTCCgccttttttcgacttttttgaaaagtaa tgttttagcatttagacCATAACCTTTGATCTAGTTGAccgaatttaaaa aattacccctcaaaatttaagtttgtcCTTTTTCTTTCCGTTGCGAAAGG ATTGACTATTTAACAGTTCATAGAGCTGGTGAAATTTCACTTCAAAGAGT cggacttttttctgggacacccggtaggtcaattgtaaaataaaatgatt tttaaagtTTCTTGTGAAAACAGTTCCTTTTTCCGTTTTTAGATGTTAGA GGGTCTCTTTTCACACTTTGGTGAAAGATAAATAGCTAAAAGTCAAGTGG GATAAAAAAGGTAAATGAATTTCGAGTCCTTTATGACTTTGCATGGATGA AAGGTTTTTAGCTTTGACGATAAAAGACCTGTTACAATCTTTAAAATGTA TTTACGGATTTTACTCAATTGATACAACCAACCAAAGTATGACCTAGGAG ATTTTCTTTTGCAAATCCTTTTTCACAGCACTAAATCCATNCCCTATCAG ATACAAGGGGGAATACTATAAGTATTTTGAGGTTCCCCTCGCCTCTGCAA TAATGCATCTTTTAGGAATCCTTCATTATTGTCAGACTgttagaaaataa acaaaaataattcattttatttttatgccACTCAGGATTTTTATGTTAGT GGAGAAATATGATACATAGTTTTCGTGTGTAGTTCCGGAAGTTTTGTTTG TACTTTGCAGATATGATGCTGTAACTTAACACCTGATTAAAGGATTGAAA AGCAGAAAGAGAAATACGTTATCGGCCAAAATTTAGTGGGCCCTaagcaa tgaagtataagcccgaagggctagaagtcaatcttcttggtaggatttga agccaacaaatcctaccaaagttgcgcggccttgagcggctcgNGCAGTT ACTAATACGCACCGTAGGGCTTTACGAGGTCAAAGAAATCTTACGTGCTT AGTaaaaaaaggtttgttattgaaataattttttttcccgcTAACATCAC TATGGGAAGGATGAAGAAAAACTTGGGGACGGGAAGTTAGAACATGGATC ATAATCCAGTCTTGACATAAGAGGAAGGTCCTAACTTCTTTCACTCAAAG TTGTTTTTACAAATATATCTATATTTGATGTTTAATAGGAAAGTTGATGT GGCTTTTAAGATGGGTGGACGATGTTTAGTTTTACATCAATACGTCAGTA CAATGTTGTACTTCTAAACGACAGAATAAACTTTTGCGATCAAAATATTG CTTGTAAAAAATGTTCATATAGCAATACAAAATGAAAAGCTTCTTAGGAA ACACATGCCTGGGGGCCACAGATTTCCAGGTCTGAAATGGTTCTAAACTG TGATCTTTGTTCGTCACAGTCCCATTCCTGTACCCGATCCATTGAAAAGT CCCGTTGGAAGTTTTTTGGCTATTGGTTTATCACTATTGCAATTGCAATA CACGATTTGTCAGTTggctttctctaattcgatctcaAAGGGACCAAAAA CTATCCTAATTTTCCgccttttttcgacttttttgaaaagtaatgtttta gcatttagacCATAACCTTTGATCTAGTTGAccgaatttaaaaaattacc cctcaaaatttaagtttgtcCTTTTTCTTTCCGTTGCGAAAGGATTGACT ATTTAACAGTTCATAGAGCTGGTGAAATTTCACTTCAAAGAGTcggactt ttttctgggacacccggtaggTCAATTGTAAAATATAATGATTTTTAAAG TTTCGTGTGAAAACAGTTCCTTTTTCCGTTTTTGGATGTTAGAGGGTCTC TTTTCACACTTTGGTGAAAGATAAATAACTAAAAGTCAAGTGGGATAAAA AGGTGAATGAATTTCGAGTCCTTTATGAGTTTGCATGGATGAAAGGGTTT TAGCTTTGACGATAAAAGACCTGTTACAATCTTTAAAAATGTATTTACGG ATTTTACTCAATTGATACAACCAACCAAAGTATGACCTAGGAGATTTTCT TTTGCAAATCCTTTTTCACAGCACTAAATCCATGATAATCTTGCACAAAC AAACCATACACTCCTTGGTAACTGTAGCCATTCCCTCCTGTTACAAGTTG AAGATGAATAAAATGCCCCCGTCTGTACCTTCAATTCACGCGATCATGCA AGTTCTTTTCTccaaattcacgcaatttttgttcacgcaaagttttctga ttcacgcattcacgctttcttgaaattttcacgcattcaagcAAGCAAGC AAGCAAAAAAAGCCCATCCACGCATTCACACAATCACTGGGAGATCTTTA AATCGAGCATCTAGGTGGGGAGGGGGAGTGGTCGAACtcgttgaaaatgt tttgtgtTTACTGAGAAATAATCATTAGAAGGTTCAACCCTGTCTTGATG CAGTTAGGTTGATATTCCTATcaggggggggtttcatggttggcggagga gcggaatcggcccttttttcggacggagtggcggaatttggcgaaaattt agacggaattacggaaaNacgaaaaaaatatcaatcgtaaacaaaggaat tgctaattcaatctgtcgtcaaaaaagcggcgcattttttaaggctttac tttttcttgcctgagaaaggttagagattgaactctagcccttcaggctt taaactcaatggccctaagtgactaaattttgacttggTGACAAAAATTa ggaccgactaaaaatttgggccgactaaaatttgggccgactaaaaattt gggccaaattaaaagtttatgattaagctttccttaatttccagtatttt aagctttctcctcCCTGGTCAAAAAACTTATCAAGATCTTACAAGATATC GTAAGATCCTACAAGTTCTTACAAGGTGGCAAGATCTTACGAGATCTTAC TAAGATCTTACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNACCTCAATTAAGTATACAGAGCTTTAACTTACAAGTTCTTACAAAATC TTACACGATTTTTTAATTCAAGTACTTGTAAGAACTTACAAGACCTAACC TTGCAATTACTTATAAAGTTATAGCTTATCAAATCTTGCAAGAACTTGTA AAATTTTAAGGTCCACAAGAAACGAAAAATCTTTATATTTCAAGttatac caaaatttcaattaagTATACCAAAGCTTTAACTTACAAGTTCTTACAAg aacttacacgtttttttaattcaagaaCTTGTAAGAACTTACAAGATCCA ACCTTGCAATTTCTTATGCGGTTATAGCAGGTTATCAAATCTTACAAGAT CTTGTAAGATTTCAAGGTTCACAGAAACGAGAAATGTTAAAATCTTGCAA AttataccaaaatttcaaaaaaaactttttacaaatgttCACCTCAATTA AGTATATAAAACTTTAACTTACAAGTTCTTACAAaatcttacacgttttt ttaattcaagaaCTTGTAAGAACTTACAAGATCCAACCTTGCAATTTCTT ATACGGTTATAGCAGGTTATCAAATCTCATAAGACCAGGTCTAAAAACAT TACCATTGGTATATGAAAGATGGGTAAAGGCAGTTTCTATAAGAATACTT TTGTGCAATTTCTTACAAGACCTTACAAGATCTTACATCCTGTAAAAAAg tatacatttttataagaaattttataaaactTATTTGGCTAAAAGTCATC GAAAAATAAGCCTGGATTTGAAAAGTGAAACTCAGATTTAAGTATTAAAA AGGATTGTAGAGTTTAACCTGCCAACTGTGATATAAAGGAATGCTGGTAC AAGAATGAGCTTGTAAGTCATTTTGGGCTAGGCCTTGACAGCAAAAACTG CCTTATTAAGCTTCTTCTTATTGCATGTCATTTTTCGtgacaaatttttt gtttaaattgaGCCATGTGTttcatcaattatttttttgtgtaaAGGTGC GAAATCACCCAATTACAAAAGTTCGATAACAAAAGAAAGGTGATAAATGG TTGAACTTCTTCAAGAAAGAAATCGCTGTGTGATGcatctttttctgaaa agatttttaagggtaagttttcataatttgaaagtgattttatcattttt aaaatcaaaaatgaaatttttccatATAAAATTCGATCGAAATATATATG TTAAAGAGtgaataacacagcaaaaaaatgaatgttttgtGCGCCAAAAA GTCTTTCGTCCaatcatattttgatatttcctCTTTCAACAAATTGCGCA AAATGGagctcttttttattttgttttttgtgaGTGATGAGTGATGACAC TGGATTGTGAGGCcaagaaagtttttgactttcaatTTTGTGTAAAAAAG GTCAACTTTACTTTTAGATATAAATAGAAATTGAAATGTACTTTGAACTG CAGCACAAAGAGGAGGATCAAAGAGAGTATGGTGCCGCTTTAGCTAAAGT CCTTTGGTGGTTTAAAATGCGCGATCAGTAAATACACAAAGATACAGTCA AATACGGCAGACCTGACGAACAACATTACGGACTTATGAATCTATGAAGG GACCAGATAGTAATGCAGGGACCATGGAGAAGGGACAATCGCCGTCATTC ATTTTGTTAGTTTTCCAAATCAAAGTGGCTTACATTTACTGTACTGTAAC CGCagtaaaaactttatatatCGGATGATTAATACTAATCTTTTTCTTGA GAGTAATTGGACAAAAAATGACTGGATTTTATGTAAAGTAAAACACGTAT GCGAATTGATTGAGGCATGGAAGCATAAATAGActtttatttattcaatt attATATTGACTGTCATTACTGTTATTATTATCGTCTTTTAcgaatttgt aaaaatttttcaaaggaaaaaagttaaaattgatGTTAAACTTTGTCAAT CTTGCTACCTTTCTTTCCACAACTGGAATCGAAAAGATCTTACGAGTTCT TATTCGAACTTGTAAGATTTTGCGAGCTCTTATTCGAACTTGTAAGGCCT TGCGAGTTCTTATTCGAACTTGTAGGATCTTGCGAGTTCTTATTCGAACT TGTAGGATTTTGCAAGTTCTTATTCGAACTTGTAAGATCATATCAAAATC TTatcaactttttctttcttgctAGCTTTCTTTCCACAACTGGAATCGAA AAGATCTTGTGAGTTCTTATTCGAACTTGTAAGGTTTTGCAAGTTCTTAT TCGAACTTGTAGGATCTTGCGAGTTCTTATTCGAACTTGTAAGATCTTAT CAAAATCTTatcaactttttctttcttgaatcATGTTAAACTCGGCCAAT CTTACTAGCTTTACCGTAATTTTCAACAATTGAAGCTAAGATGGCTGTAT AAGATTACAAGATCTTGTGCGTTCTTATTCGAACTTGTGAGTTCTTGCGA GTTGTAAACGTGCAAGATCTTGCAGGTTCTAGCAAGATCTTGCACGTACT GACACAAGATCTTACCAAGTTCTTACAAGAAACTTCAAATAAGAACTTAC GGGATCTTGTAAACTCTTATAAGATCTTGACAAGTTTTTTGACCAGGGct attttccatctgcttgtaaattCAGAAATGACCCAAATTTATAGTctgtc ttaattattagtcggcccttagtgactaaatttttacgaggtgactaaaa ttagggcagACTAATACACCAATGTAAATGTTCTAATATTAGAAAGCCTA GACCAAAAGTTTAGAGAAATAATATgtcaaaaagggaaaaaatgaTCTCC ACGTTCTGCATTTCTTTTACAAAACACGAAAACTCTTGAATATGCAACTG GTTTTGATTTCGTGGAGGAAAGCAGAGATGGTTTAGAAACCATGCTAAGA GGTAATCAAGAATTTATTATGATAGTCCAACAAAAAGGTTAACTATGTCA AATTCCATCAAGACCAACTAAAGAGTTCGCTTAATCTTCTTAGAAAAACG TCTAAGGAGGAGTGCTCTCGTACTTTAGTTTGAGAAGCAAACTCTTCGTA AAGAGCTCCTCCCCTGCGAGGATTTTTGAAGAGTGATTTAAGAAACGGCA GGGTGTATTATGCCACCACGTTAAGAAGGCTGGACAAATAACAGGAAACT TGTCAAAACTACGCGTAGAGAAAGAAGATCTTTCTGATGGATAAAAGGAT CACCTAGCCAGGATGCCCAAACTCACATACACGCTCTTTTTGTCAGAGCA ATTTCATAAGAGTAAagactcaatttttttctaaaaacttaagaacaaat taagaacaccGTGCTTCAGATTATAAGAATTCCCGAAAAAGAACAGCAAT ACAAGAGCAGATAAAGATACCAAAATCCCGGCATTATTCCAAGATGAAAA ACTCTATTtgcaggctcggatacagagggaggctataaaccaatggagga gagtgcactttattatcgtattaccttatatggaaactaattactctcca tgaataagatagcctacctcctgtatccgaccctgatTTGTTTAGCAAAT TGACACTGTAAAGTGGTGAGTTTCATCCATAAGTGTTACTGTTAGATTTT TTTGAAGAGGTTTCTAGGGGTGGTTTTTCTGAAGTCAAACAACTCATTAG AAACCCAGTCAAGAGAGATTGTTTGAATTGACAACCAACTCCTTTCTGTG ACCtctgaaagtgaaattttctggAAAGTCAGACTTTCCCTTTGGaagta gacgatgttatcgtccgttacagtgatagtaaaggcgggaaaatatggcg gtatggcgtcatggcggtatacgggaaaaatcggcgggagagtttcgaag aagactggcaactctaccgactgtgaactcttttcggcaaaaaaacccgt ttgcgaattttcttccgctttgggcttttttcttagatagtgattcgtct tagcaTATAGCATAGTTTCCTTTGGAAGTGATCTGAGAACAACTATTTTT TGAAGGGCCCTTTTCATTTCTCATTTCAAGTGGGTCAACTTTGAAGAGAG GatttaaacaaagaaaatgattttacaAAATAAACCATAAAGAAGAGCGA TGTAACGGCTAAGCTCTGAAGAGGTCCTTTCATCCATTCGAGTGTATTCA AACAGCCCCACTCAATACATTTAAGTGCAATTCCAAAACTCTTATAAAAA GTTCTTGATGAAATTGTTTATTTGAAGTGCTTTTCATCATCAATGCACAA ACATCTATGGACTACACCTCTGAAAACAATGGTTTCCTTTACTACCTCAA ATGTAATACGAACATTTCATTTCTTGACGTAGAAAATGATTTAGAGAACT TGTCAACACAATGTACAAACAAACGTTTAGAAGAGGGAGTTCAAGCCTCA GAAAGAAAGTTGATATGCACACATCTCTACCTGAAGTTCATTCCAGTTAA GTgtgcactaatctttgttttgcttgcaattttttaatgaatgcAGCACG TTGTTCagcgttgaaaagataatcaagAGCACTATGACATctgagaaaaa taattcaaaaattaaagattgaaagagatgaaaaatgaagaagaacgaaa tgaactttatttttttttgaaagcctATCACTTTCTTGTTCAATAGAGAA GCTAAGAATCTGCATTTTGTCAGTATTTTTCTGCAAATTTCTTCCGtccg tgaagccttaaaatcttctttatacgcgtttatttttaaaaaacacactt ttaagaaacatgaagctcagaatgcctaaaaactaagaaacatgtaagaa acatgctgaggctgagaatgagaaaataaaaattttttaaagttttttaa gaaccttccaattctCTTTAAGAATGTATTCTTAGTTAgtttgtctttaa aaaaatacgtaAATATCAGACTGAATCATAGATACTCAGAACGCAGAACA AAGTGATATCAAAACTCTCCATTCATCGAACAGGAAAAACCACAACTTAA GCTGTGTGTCAgacatttcaattattttcaggGCTATTATATTAGAAACA TAATCTTTATGACGACGAATAAGGGTCGATAGTGGTTTAGGTTGTCACTG AGTAGATGAGATCGAATTGCTTATATTTAATCAATTAAGATGATGACGAA ACCCCCGtctttttggttttataatccgggggggtactagagCAAAATTG GATGGTTACGGGAATGCGCCACTGGTCCTTTTTTCACctccatgagtccc aggtagggtcgcaatgtcattccgacattttaaattttccgggggttttg ctgtTTGGGATTGTTTAGGTCAGGGCTGCTAGTAAcagcttgtcactgtg ccgggtgcatactcggcgccttgggccccgcagggttgctagtaacggct cgaatttcagtcaggttaaaaaaggggcaattttgcccatattataataa cattacccccgtcttttttgtcattctataattTCAATCttattcagggt cacttttttcgtttcgcaaatttcggtaaaatttttgaagaaacgGGTCC CACgaagggtccatttttcgaacttcaccggagcacccccgttggtcggc aagggtagtagcCTTATAGTTCGTTAGATCCTTTAAAGCGATAAAGGAAG GACGAGTTACAAAGCATATGCTCGCAAAACGATCAAAAACAGGCAAGAAC TAAagtgaaaacatgaaaaataactcCTGTCTCATTGATCTCGCATTCAA TTCTAAAATGACAGGGTACGATGCGTAATTAAGATGTTTTTTCTAAGACC CGAAACCCGAAAACGTCGGAATTCGGCTAAATTAAGATAAAAAGAGGGAA CATAATAGCTGCGTATAAACATATAAAACTCGTTTTGCGCGCAtgacaaa atttagaaaattcctTGTAATTTTTCAGATTACGAGCATTATTGAGGTAT AATGACAAAACGGACGTCACAGGGCCACCGGGAAATCCCGGATTACCTGG CAAGCCCGGACCACCAGGATTACCTGGAAACAACGGACGAGATGGATATC ATGGAACAAGAGGTATACGTCATTCGTTGTTTTCTGAATTAAGTTGAATA CTTCGACCTATCGATAAACTGACGTTAGCTAGAAGATGCttagttgactc tctctaattcgatcatGAAGGGACCTATTATTTTCATACCGATAGTCAAA CTGAGGGGActaatgttttagttcgaattactaTAAACAGCTTTTGAGGC GATattttgggatgagctggagtttttacaagatacttcactaattggtc atttttgaactgatagagatgacgcgttctttagaaaaagtaacaaaatt gttttattactggttaacgaccaaccaaatcaaataagagcatgtaaaaa ctccagcttgtcccgatATTTTGAATGGGACACAGGACAGGATTTAATGC CCAAGGTGGCCATAGGTATGATATGTTGACAGTTCCTCTATGACGTATTG GAGCCAGGGGGGTTGTTGTGATAGCGTCAAAGACCCGCGTAGCTGCCCCG AATTAGTCTCAACTCACACTCATGACGAtaattcaacaaatttttatcaa ataggTGAAATCGGCTCACAAGGGCCAGAAGGAAAACAAGGACCACTCGG ACCGCCTGGTAAAGATGGTTTGAACGGAATTAACGGTATTCCTGGCCTAC CCGGATATAAAGGACAGAAAGGTGAAAAAGGAAGCTCCGGAAGAAACGGT AAGCACTTCAATGAGCTTCTCGTTGGAAGGGTAATTAGTTCACATACTGA CGAATTTGATAGGAATGAATGTATGTCAAATATGATTTGCCACTTATTTT CGGTTTTTTAAGACTAGAGGAACCATGAGAAGAATTAACTTTCTTGTTAA CAGATAGCTCAGCAAGTGTTCGCGATCATAAAAATCACAAAGAGAAAGGA GTAAAGTAAGAAATACAACAAGTATTGTTGAATCATATTTCTCATTGATT TCAGGGAGAGATGGTAACAATGGTCTTCCAGGACCTATGGGGCCGACCGG ACAGAACGGACGCCAAGGTGTACGCGGCTCCAAAGGAGAACCGGGGGAGT GCGGACCCTGCTATTTCAACTTTCCACGCGCGGCCGAAACTATCCGCGAT GAGGAGAGAGAGCAAATCCAGCCTCATGTTACGTATACCAAATGGGGATC TTCAAATTGTCCAGTAGCGAATAAATTGCTGTACTCAGGTAAGgagatac cttatcggcccaaatttttagtcagtcctaattttagtcacctcgtcaaa atttagtcactaagggccgactaataattaagttttgttcatttctaaat ttttagttggcccaaattttagtcggcccaaatttttagtcggccctaat tttcgtcaccaagccaaaatttagtcacttagggccgactaagtttcgGC CGATAAGGTAGACAAATCGAACATTCGAATGAGATAATATCAAATGCTAA AAGAAAACGATAATAGCCTGTACCATCCCCCATTATGGATTTTGTAAAAT CTTGCCGTGTGATACTTTTCAACGAGAGAAGACTTTGTTACAGGCTATAC ACCATAAGCACAAATGGATAATTTTCTCCAGCTCTTGGTTAAAGCATCTT AAAAAGaattcaattcattttttattgaaatctgtgttatttttgtttat agGACATATCGGGATGAGCAAATACCGACAACCGAATGGCGAATATACCG GTTCAAATGTCGTCTGTGTTCCTGTCAATTCAAAACGACGAATCACAAAA CGACAAATCTTCGCCGACTTAAATAACGAAGCGTATTCGTATTTCTTGAA ACCGAGAGTTGATAAGCCGACCAAAAAATGGGAGTCGGTGAATAAAACGA CCGAACAATCTGAGCCGATTCTCAAATTCGAAAAGACAAATCGAACGACA GAAGGATCGTTTGTTGACGACGGAAAACGAGAAACGACTACAAATGAAAC GAATAACGAAAGCATCACAACAAAGGAAATTGAAGGACCTACTGAATCAC AGACGAAAAGTTCGGTAAGCAATCAAGAAATTCTTGGAGGTGGGAAAACG ACAGGTCAATCACCATCAACTTCACAAGCAATAAGTTCAAAAACAAGCGT TCATTCTCCTACGAGATCACAAACGACAAGAACTCGTAGAGAAACAGCAG TTCCAACCGAATCGCATAGAAAAACGACGACAACAAGTACACGAGAAACG ACAACAGCAACAAAAGACACCCCACCGAGAAAGGAGACCTCACCGAATGC AAAACAACAAAGCTCGTCGCCTTCACGAGGGCAAGGTCAAACCAATACTG GAAACCCGAGCCCTAGCCGACAACAAACGACAAATGATAACGAGTATAAC GAAGAACCGAAATATATCCCGAAATACGCCGGCATGATCGGAACGCGAAA ATACATTCCGTGCGCTGTGTGTGACGTTGAAGAACAAAGCGACCAAATTA TGATCCCCGCCCAAACTAGTTGCCCGCCTGAATATGAAGTACAGTATCAA GGCTATTTAATGAACTATCATCATGGAACACAGGCTGCTAATATCATCTG TGTTAATGATCAAGCGTTAGGTATCTCACCTAGCTCTGATGCGGGGATCC GAAAAATCGTTTCCAAATATTTATCCCACATTGTTGTGGATTGTACAACT TTCCCATGCCCACCTTTGAATCATGCCGAACTATTGAAATGTGTCGTTTG TTCAAAGTAAGGTAATATCAAAAGGACGTACAGTAGCAGCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_020267XLOC_020267Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00034839-exon-sc0001226-1491911889:7896..8861TCONS_00034839-exon-sc0001226-1491911889:7896..8861Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:7896..8861TCONS_00034839-exon-sc0001226-1510915933:7896..8861Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:7896..8861TCONS_00034839-exon-sc0001226-1575043694:7896..8861Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1491911889:8931..9084TCONS_00034839-exon-sc0001226-1491911889:8931..9084Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:8931..9084TCONS_00034839-exon-sc0001226-1510915933:8931..9084Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:8931..9084TCONS_00034839-exon-sc0001226-1575043694:8931..9084Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1491911889:19274..19407TCONS_00034839-exon-sc0001226-1491911889:19274..19407Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:19274..19407TCONS_00034839-exon-sc0001226-1510915933:19274..19407Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:19274..19407TCONS_00034839-exon-sc0001226-1575043694:19274..19407Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1491911889:19950..20093TCONS_00034839-exon-sc0001226-1491911889:19950..20093Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:19950..20093TCONS_00034839-exon-sc0001226-1510915933:19950..20093Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:19950..20093TCONS_00034839-exon-sc0001226-1575043694:19950..20093Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1491911889:20350..20583TCONS_00034839-exon-sc0001226-1491911889:20350..20583Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:20350..20583TCONS_00034839-exon-sc0001226-1510915933:20350..20583Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:20350..20583TCONS_00034839-exon-sc0001226-1575043694:20350..20583Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1491911889:21048..22136TCONS_00034839-exon-sc0001226-1491911889:21048..22136Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1510915933:21048..22136TCONS_00034839-exon-sc0001226-1510915933:21048..22136Clytia hemisphaericaexon
TCONS_00034839-exon-sc0001226-1575043694:21048..22136TCONS_00034839-exon-sc0001226-1575043694:21048..22136Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001226supercontigsc0001226:7896..22136 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0.152369 0 1.76279 0.935797 1.73313 0.894481 1.73641 1.65823 2.96364 4.3799 0.875888 0.939962 2.18725 1.4621 2.1863 1.33455 1.94858 2.35173 1.14544 0.535975 2.54662 4.43416 0 0.206678 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00034839 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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