TCONS_00030300 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030300
Unique NameTCONS_00030300
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2485

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030300 ID=TCONS_00030300|Name=TCONS_00030300|organism=Clytia hemisphaerica|type=transcript|length=2485bp
agaaaagcTGCTGGATGACCTGGGTTTAACAGGCAGAAAGCGATCTTACG
CCAGATCAGAGATGGGATAGAATAGAATCTGTTCAAGTCAGTCCAACCTA
TTTTATTTAACTAGCCCGCGATCGTTTTTCAAATACAGCCTAGAATAATG
GTTACACTTACAAAGGAAAGTTATCCTTTGACCTTTTGAAGCCGTAAGGA
TGGTAAAGGTGAACACAGTGTAAACAAGATGCTCGGATGCGGGAAGCGGG
TAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTAC
CTCGTGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTG
CAGAAGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCACTGACA
ACTACCGTGTCTTCTTTCGTAATGAAAATGGAATCATTTCTCCATTCCAC
GACATTCCTCTTATGGCTGACGAAAAGaATGGAGTATATAATATGGTTGT
GGAAATTCCCAAATGGACAAATGCAAAAATGGAGATTTCTACAAAAGACT
TTATGAATCCAATTAAGCAAGATGTCAAAAAAGGAAAGATGAGGTTTGTC
AAGAACAGCTTCCCATACAAAGGTTACATGTGGAATTATGGTGCTATTCC
CCAGACCTGGGAAGACCCAAACATCACTGATGAACACACTGGTCAAAAAG
GTGACGGTGACCCAATTGATGTTTGTGAGATTGGATACAAGGTAGGAACA
CGTGGCGAGATCAAACAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTGA
CGAAGGAGAAACAGATTGGAAAGTCATTGCTATTGATGTCAACGATCCTT
TGGCCGAAAAATTGAACGATATTGGTGACGTCAAAAATGCCATGCCAGGG
CTTTTGGAGgCAACATACGATTGGTTTAGACATTACAAAATGCCAGCAGG
TTCACCTGCCAACGAATTTGCTTTCAACGGGGAAGCTAAAGATAAAGCCT
TCACTGTCGGTGTTCTAAACGAGCTTCATGAACAATGGAAGAAATTAAtc
atgaaaaatgttgaaaataacaaaaatctCGCCTGtgaaaatgtcGCTGT
AGCTGATTCACCATACAAAGTCACCTCCGATAAAGCTAATGTTGCTGTTG
AAGGGCAACCCGAACTCACAAAGCCAGCTGATCGCCCTGCTGACGTCGAC
ATGATGTATTACCTAACTGCAGAGCAGAAGAAATGAATCGTTTGACGTGG
GAAGAAAACTAATTTATTAGGTGATGGTGAAGTTGGGTTTCATAAACCTC
TACACTCTTAAAAGGGTTTCAGCTCTACCAGGCTGTTACACTGTGTGTGT
ATGTGACCTGTTTTTAAAAAACGGCAAAGCATtgggattttcttattttt
gttattgttccTGGTTGTAGAAGAATTTTTACAATAagtactttttttat
ttgtctaCGATTTTCTAAAATGATAATAATTTATACAAACAATCAAAAAA
TTCTAATAGTGAAAATTTATATTCCTTAATTTGATTAAAGGTTTACATCC
AGGGATCGTCGAAAAGAACGTTCGCTTAGTAAAGAAGATActgggaaaag
ttttttaatttgcTGCCCTAGTTATGTGACATCTTTAATTCattttgaaa
agagaaaattcagcaaattaaaattttctgcTTTCAAAGCAGATCTTAAG
AATTCAGATGCTTTTTAAGGGGATAATCACGTaagaaaacaattattttt
ttgtaataatttctgaggaagtaaatattttttgaaactttccacAAATG
TAGTACAATTATAAAGGattattaaaattgaaaaaaaatgttattgTGAA
AGCAGTCGGTTTACGGTGGTAAACACCAAAAGCAAGCTGGTAAACACATG
ACTTCACTGAGGATAAGAACAGGTGATAGAACACAAATACAAATAACTCC
GAAAACCAGGCAACTGGTTGGATCTCTCGTTACGTTACCAAGACAATCTC
GATATGCAGCACTTCCAAAAACCATCTTCCGATTCGAAATTCCAAGTTTC
CTTCTTCGATTCTTTGATTTTTGGTTGTCGTTCTTTTACAAAGTCTTACT
GTTTCTTCTTATGTGATCTGTCCTGATAAGCTTCTACTATAAACAAATCA
GGAACATGGAATTCGTCGATTTGTAAATTTGGAATTGGTATTTTCTCTCG
ATTTGATTTCTTCAATTCTCTTATTTCTTCTCAATGATATTATTCCACAA
CTGAAACAATTATTCGCAATGACACAACTCTTTCTTCAAATGCAAGGAAA
ATGGTATTAGATTGTACGGAATTAATTCGATAGATTTTgtaaaagtgtta
aaaattcaaGACCTTGTGCATTTTTTTGAATAACCGAAATCAATaattaa
aattcgtcaaaagaTGCACATTTCATTATTCATGGCAAACGTTACGAGAT
ATGATAAGGTACAGGATGGTTTCAATTGATTTTCC
Run BLAST on NCBI

protein sequence of TCONS_00030300-protein

>TCONS_00030300-protein ID=TCONS_00030300-protein|Name=TCONS_00030300-protein|organism=Clytia hemisphaerica|type=polypeptide|length=335bp
MLGCGKRVMGRLFPLSSLSIATCYLVSTPTSNIIPLVRNICRRMSYQFQE
FGTPFTDNYRVFFRNENGIISPFHDIPLMADEKNGVYNMVVEIPKWTNAK
MEISTKDFMNPIKQDVKKGKMRFVKNSFPYKGYMWNYGAIPQTWEDPNIT
DEHTGQKGDGDPIDVCEIGYKVGTRGEIKQVKVLGVMALIDEGETDWKVI
AIDVNDPLAEKLNDIGDVKNAMPGLLEATYDWFRHYKMPAGSPANEFAFN
GEAKDKAFTVGVLNELHEQWKKLIMKNVENNKNLACENVAVADSPYKVTS
DKANVAVEGQPELTKPADRPADVDMMYYLTAEQKK
Run BLAST on NCBI

transcript from alignment at sc0000806:1216..9515-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030300 ID=TCONS_00030300|Name=TCONS_00030300|organism=Clytia hemisphaerica|type=transcript|length=8300bp|location=Sequence derived from alignment at sc0000806:1216..9515- (Clytia hemisphaerica)
AGAAAAGCTGCTGGATGACCTGGGTTTAACAGGCAGAAAGCGATCTTACG
CCAGATCAGAGATGGGATAGAATAGAATCTGTTCAAGTCAGTCCAACCTA
TTTTATTTAACTAGCCCGCGATCGTTTTTCAAATACAGCCTAGAATAATG
GTTACACTTACAAAGGAAAGTTATCCTTTGACCTTTTGAAGCCGTAAGGA
TGGTAAAGGTGAACACAGTGTAAACAAGATGCTCGGATGCGGGAAGCGGG
TAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTAC
CTCGTGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTG
CAGAAGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCACTGACA
ACTACCGTGTCTTCTTTCGTAAGCAATTCCTCTTTATATATTCATATTTT
TATCCCCTCTCTTTTTCTTCTTGTTCTTTGCTTTTTCATCACCAGACTCA
AACGAACGGACAGTCAGGCACATCCTGGCAAATGAACAGGATATTTTTCA
CTTGTAATTGGTGGCAAATGCAAGGGGTCGAAAACAAAAGTGATGTAAAG
TGTCGATTCCGTTCGATTGAGATCGTCTCGATTGAGCCGAGAACGCTCCC
CGAATTCCTGCGCGGATGAAAAACTTCAATCTGTCAATCATTTTCTCTAG
CGAAGAGTACGCGAAGCGATTCTAGCTTTACGATAGTGCCGCGGGTCATC
AATGGATACCTTAAGTGGATAAATTTTGGCGTGGATTTAATTTGGCGATT
TGCCAAAACACGATTTTTGGCGGGGATTTAAGTTTTAATTTTTCACATAA
TTCTTTTTTTGTTAAATTTGGCGGGGATTTAATTTGGTGAATTGCCGAAT
TTGGAAATTTTGGCAAGGATTTAATTTGGCGAATTTTGGCAAACAACTAA
AGCTAAAAGTGGCTGCAAGAAGAAGTAGTGAGATAGCGAAGTAGCGAGAT
ATGACTGAAGCTGAAAGACACCACCACAAGGATTTATAATAGTATGTAGT
AAGCGAGAGGCTAAGATGTGATAATGTAGACCTGAAAGACTTGTGATTTG
ATGAAGTTAATAAGATATAAAATATACATTTAAATTTTTATANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAAGGAGAAACATTAA
TAGTAAATAAATAACTTTTGCCAAGAAACTGATTTTTGTCCCGCCTTTGC
TTGAGTGCAGCATAGGGTACAAAGTCCAAACATACGTTTCCCGTAATTTT
TGTGTGAAGAGTTAGGTCTACATGACTGTTTGGTTTGAAAAATTGAGTTT
CAACGTACTTGCCACTGTTTGGTTCGAAAAATTGAGTTAGTTTCAATGAA
TATACTGAGTATTTATTTTGGGCATTTGTTGGGCAACATGAAATAAACAT
CCTAAATAGGTGTTTCGAAAACTACTTAGACTCACTGCAATAGACCAATT
TCATTTTCCTTCCAGGCATTTTTAAACGTCATTTCTCTGCCTTTGAAGTT
GCATGTGAACTATTAAAATAAAAATAGCCTGGCATTGACAAAAAGCAACC
ATGCGTGTTTCAAAAGGCAAAACAATGGAAATGCGCCAATCCGTTCAGCT
GACCAAAATGACACAAATGACAAAATGACCTGTCAAGATTTTTTGATATC
TTTTTGATTGGTAAAGCAATTAATCTCAAATAATCTTGACAGGAATACGC
TTTTCATATAGCCAAATTAGCTTTTTTACCAAAAAAATTATATAAAAGTC
CATTTTCAGCCATTTTCCACTGTTTGCATAGGGTAAGAACACAAAATACA
GAATCGATTTTAGCAGAATTTGTTTGAAAAATGACCCTACAAGATTTGAC
TATCTTTTTATTTCATGAAGCAATTACTTTCAAATGAAAAATATATTAAC
AATGAATGGGTAAGCTTTCTAGAAATCTTTACATGAATAGCATAGCTTTT
ACCAAATAATAGCACTTTAGAATCAGTCAAAAACCAGCTTTTTTTTCAAT
TTCCATCGAGTTACAGGAATTTGTTCCTTTTTTGTTTTGCTGAAATTTTC
AAGAGAGGTGGCCAACACAGTTCCCTCGCTCTTGTCAAGGCAACGTGGGA
AGGGGGTAACAGAATTAAAATTTCTAAGTAAAATCTTAAATATCACCCAA
AAAAGTGCCTTTTTTTGCCAATTGTTACTTTTAATGAATAGTCCCAGCCT
TCAGCCATCTTTAGTAAACCTTCCTATACTTCTTGTCCTTCAGAAAAACC
AAAAATATTGGCCTTAGGTTTACTTTCAGTTCCAGTAGTTATTAGTACAT
CCTATTTCTGTTGTTTTTGTGCGGGTTTTCAATAGAGATGTCGCGTGACT
CAAATCCAATTTCTTTACATGACTCCAATCCCGTGTCTTATTGGACTAGA
GAAGTCGTCCTTTGTTCTTAATTCTTGTTGAACTGTTTTGTAGGTAATGA
AAATGGAATCATTTCTCCATTCCACGACATTCCTCTTATGGCTGACGAAA
AGGTGAGCTTTCCACTCTGTTATATTCACCCCTCCGCAAAATTTTATTTG
GAAATTTAATTTCAATTATTCCCCATTCTGAAGGAAAATCTTCTTACATA
AAAATGCTGCTTTAAATGCTAACTCCTTCTTGGCAATAGCAAACCAAAGA
ACCCCTTACAAAATTCAAGAGCCTCTTAGAAAACCCTTTGAAATGGGAAT
ACCTCAAACCAGTAGCAGAAACTATGAATTTACCTTTAAAATACCATAGA
ATCCAGACAAAGGCTAATGTAGTTCAGGTTCCTAATACAGTAAACAGGAA
AGTTTGGTTGGAATATGTTCAAGTCTTATTAATAGGTTGACCTAGTAGTG
AGGATCCTTTTATTATATGATTCTGAAAAATCTCCAACTTATTTTTCAAA
CAAGATTTCTAAACAATTCAATTCAATTTTTATTTAGTGTAGGCAGACTA
AAGGTACTGTGTATGCACTGATTGTTTTATTAACTTGAATATTTTCTTTA
TAATAGAATGGAGTATATAATATGGTTGTGGAAATTCCCAAATGGACAAA
TGCAAAAATGGAGGTGAGAAAGTGGCAGTGCGACAATAAGTTTTAGCTCA
TTGTTCCATTTTGGGACACTATAACAGCCACAAACATAAAAATGACAAGG
CAATTGTATAATCTTATTTCTTTTATTGTTTTAAAATAGAAAAACATATA
TTGAATGAATAAAAAGAGAAATAAGAACATCTCTCAACATTTTATAAGGC
ATTTATGCTCGTTGCTCAATATTTCAGCTGATTTTAATTTTCAAATTTCC
AGTTTTCAATGGATGACTCCCTGGATTTCTACAAAAATGACCTCATGAAA
TCAAGCCAATTATTGAGATCAACAAAAAGTGATCTCAATAAACCCTGGTA
TTGTAACACCCCGATATAATTCTCTTCTGGAAATTTCACTTTGAATGTCT
GCTAGAAGAAGGAACTTTTTCCAAAAAAATTAGAGATATATTGTTTCTTT
AAGTTGTTTTCCTAAAAGAACTTGTAAAATGAAGTATTGGCATTAGCCAT
TGTATTCTCAAACAAGGTATTTAATTATATCATAGAGTTAAATAACTGAC
TCTGATTAACTATTTAGATTTCTACAAAAGACTTTATGAATCCAATTAAG
CAAGATGTCAAAAAAGGAAAGATGAGGTTTGTCAAGAACAGCTTCCCATA
CAAAGGTTACATGTGGAATTATGGTGCTATTCCCCAGGTATGCATCATCA
CGAAATGTTAGTGCTCCATTTTTACAGTCCTCTTATGTAAGGGTTGCCAT
TTTTGCAGATAATGTCTGGAAAGCTTAGTTATTGAATTTGTTATGTGCAT
GTCCCATAAAAGATATTATAGTTATTCAACACTTCAACAACATCCGTTTT
AAACAATTGGAGTAAATTAATTTTAATGTATCTTGAGCGTAAGTCAGAAA
TAAAATTTGAATTTTTCTTGCACAATTAAAAAAATATTTTGTCAGTAATT
AAAATTTTCGTGTTTTTGACAAACTTTCTGGAAAGATTTGTCTTTTTTAA
ATAAAATATCTGGAAATCTCTTGGAATTTGGAATTTTCCTACCCGTAGCA
ACCTAATTGTTGTCTTAAGTATATATTTACAGCAATGTTAAATGATCTGA
CAACTATTTTCTAATAAGTGTTTTACAATGTGAAAATCAACTACGAATTT
CTCTACACATGCAGACCTGGGAAGACCCAAACATCACTGATGAACACACT
GGTCAAAAAGGTGACGGTGACCCAATTGATGTTTGTGAGATTGGATACAA
GGTAATTACAACTTAAAGTATATACAGTGAAAATTATTTGATCAAACTAA
TTTTTTATCAAGTTCAACATTCTGCTAATTCAGAACCACCCTTATTCATT
TGTTGTATTTTTTTGTGACAAACTTTTTTGCTTTTTATTTTTCTGAAAGA
ATATTATGTTTTTGTTTTCAATCGGCGTTACGTTAAAAACGCTTTCTTTT
TTCATGCATGGTCAGAAATAATTTAAATATGCCTTGGCACACTTGTTAGA
AATATTTTCCACTGGATGTATTAATATTAAAAGTGGTCCCATCCTTCTGT
AGGTAGGAACACGTGGCGAGATCAAACAAGTAAAAGTTCTTGGAGTCATG
GCTTTGATTGACGAAGGAGAAACAGATTGGAAAGTCATTGCTATTGATGT
CAACGATCCTTTGGCCGAAAAATTGAACGGTATATTCATCTTTAAGAATC
TTAACCGTATTTTCAGATTATACTTACAAAGTTATTTTCACAATCACACT
ATCCTGTTCTCATTGTCCTTCCCTTTCCCTTTTAAAAAGGGGGATTTTTT
TCAAGAAAAATGGTAAGGGGTGGGAAAAATCCTTTTCAAAAATCCAGAGG
GGGAGAGAAGAATGCTTCTTTATTCTCTTGTCACAAGAAATAGTTAACAA
TTCAAGTTGTTACTTTAATCGGATTGAATTTTGCGAGCGAAAAAAATCGC
GAAATTTTCTGGATTTAGATTCGCGAGTCAAAGTTTTGAAAAGTTTCGCG
TGGATTTAATTTCGCGAATAAGCCTGAAAACAGCTAAAGAAACCGTTTAC
AAGCAGCAAAACATATTATAAATTTTCAGGGAGATTTATTTCAATACCCA
TTTTGCGCCAATAGTGTAGATTGTGACTAAGTTCGTCCTGTCGATTGAAT
TTGTTATAGTGTTTTAAGTTTTGATTATTTTAAATAAAGTTACAACTTTA
TTAGTTGTTTTGACTGTCTTTCTAAACTGTTCTTTTTGTTGTTTCATTTC
AGATATTGGTGACGTCAAAAATGCCATGCCAGGGCTTTTGGAGGTATGTA
CACCCTTTATTGTACGCCTTTTGAACAAGGGGTGTTGTTTTTTCAGATAA
TTATATAATAAAAAATCACAACTTTTTTGAGCGTTTTTCAACTGTGCCAG
TTAAAGTTTTTTTTCTCAAATTTCTGCAAAGTTTTAAGGATCTGCTAATT
CAGTTCAAAAACTTTCAAGAATTCCTAATTTTTTAAATGGAAAAATTAAC
ATTTACCACACTTCTGTATATACGTTTTATTTTCTTTCAGGCAACATACG
ATTGGTTTAGACATTACAAAATGCCAGCAGGTTCACCTGCCAACGAATTT
GCTTTCAACGGGGAAGCTAAAGATAAAGCCTTCACTGTCGGTGTTCTAAA
CGAGCTTCATGAACAATGGAAGAAATTAATCATGAAAAATGTTGAAAATA
ACAAAAATCTCGCCTGGTGAGCTATCTACCTTCCTCTAACGGAAGGCTTT
AAAATCTTTCTTTTTGAAAATGGGCTGTTTGGGCTTTCCTNTCTTCTAAC
GGAAGGCTTTAAAATCTTTCTTTTTGAAAATGGGCTGTTTGGGCTTTCCT
TATTAAAGGATTTTGGTATTTTTACTAATACACTGTTGGAATCAGCTCTC
TTGGGAATTGGTAAAGATGCTAGAGAGGGCCCTTGTTTAACACTATTATT
ATGTTGTTGTTTGTTTTTTTTAGTGAAAATGTCGCTGTAGCTGATTCACC
ATACAAAGTCACCTCCGATAAAGCTAATGTTGCTGTTGAAGGGGTGAGTG
GATCATCGAAATATTTACTTTGAACATATTCTTCGAACAAAATCGATAAA
TATGCTCATTTATAAAATTCTTGTGATTATTTAGATAGAAATTGATGCCG
TGTTTAGGTCGTTTCAGGTGGTCAACAACTCATTGAAATTTGATCAAAAC
AAGAACATTACTTACTTAGACTTTGAACTTACAAAACTAAAAATTATTAT
TTTATGAACACCATAACCTCCTAACACCTTGAACACGTTTATAATTTTCT
TGCCTTTTTTCCCATCTCAGCAACCCGAACTCACAAAGCCAGCTGATCGC
CCTGCTGACGTCGACATGATGTATTACCTAACTGCAGAGCAGAAGAAATG
AATCGTTTGACGTGGGAAGAAAACTAATTTATTAGGTGATGGTGAAGTTG
GGTTTCATAAACCTCTACACTCTTAAAAGGGTTTCAGCTCTACCAGGCTG
TTACACTGTGTGTGTATGTGACCTGTTTTTAAAAAACGGCAAAGCATTGG
GATTTTCTTATTTTTGTTATTGTTCCTGGTTGTAGAAGAATTTTTACAAT
AAGTACTTTTTTTATTTGTCTACGATTTTCTAAAATGATAATAATTTATA
CAAACAATCAAAAAATTCTAATAGTGAAAATTTATATTCCTTAATTTGAT
TAAAGGTTTACATCCAGGGATCGTCGAAAAGAACGTTCGCTTAGTAAAGA
AGATACTGGGAAAAGTTTTTTAATTTGCTGCCCTAGTTATGTGACATCTT
TAATTCATTTTGAAAAGAGAAAATTCAGCAAATTAAAATTTTCTGCTTTC
AAAGCAGATCTTAAGAATTCAGATGCTTTTTAAGGGGATAATCACGTAAG
AAAACAATTATTTTTTTGTAATAATTTCTGAGGAAGTAAATATTTTTTGA
AACTTTCCACAAATGTAGTACAATTATAAAGGATTATTAAAATTGAAAAA
AAATGTTATTGTGAAAGCAGTCGGTTTACGGTGGTAAACACCAAAAGCAA
GCTGGTAAACACATGACTTCACTGAGGATAAGAACAGGTGATAGAACACA
AATACAAATAACTCCGAAAACCAGGCAACTGGTTGGATCTCTCGTTACGT
TACCAAGACAATCTCGATATGCAGCACTTCCAAAAACCATCTTCCGATTC
GAAATTCCAAGTTTCCTTCTTCGATTCTTTGATTTTTGGTTGTCGTTCTT
TTACAAAGTCTTACTGTTTCTTCTTATGTGATCTGTCCTGATAAGCTTCT
ACTATAAACAAATCAGGAACATGGAATTCGTCGATTTGTAAATTTGGAAT
TGGTATTTTCTCTCGATTTGATTTCTTCAATTCTCTTATTTCTTCTCAAT
GATATTATTCCACAACTGAAACAATTATTCGCAATGACACAACTCTTTCT
TCAAATGCAAGGAAAATGGTATTAGATTGTACGGAATTAATTCGATAGAT
TTTGTAAAAGTGTTAAAAATTCAAGACCTTGTGCATTTTTTTGAATAACC
GAAATCAATAATTAAAATTCGTCAAAAGATGCACATTTCATTATTCATGG
CAAACGTTACGAGATATGATAAGGTACAGGATGGTTTCAATTGATTTTCC

Coding sequence (CDS) from alignment at sc0000806:1216..9515-

>TCONS_00030300 ID=TCONS_00030300|Name=TCONS_00030300|organism=Clytia hemisphaerica|type=CDS|length=10080bp|location=Sequence derived from alignment at sc0000806:1216..9515- (Clytia hemisphaerica)
CAACCCGAACTCACAAAGCCAGCTGATCGCCCTGCTGACGTCGACATGAT
GTATTACCTAACTGCAGAGCAGAAGAAATGATGAAAATGTCGCTGTAGCT
GATTCACCATACAAAGTCACCTCCGATAAAGCTAATGTTGCTGTTGAAGG
GGCAACATACGATTGGTTTAGACATTACAAAATGCCAGCAGGTTCACCTG
CCAACGAATTTGCTTTCAACGGGGAAGCTAAAGATAAAGCCTTCACTGTC
GGTGTTCTAAACGAGCTTCATGAACAATGGAAGAAATTAATCATGAAAAA
TGTTGAAAATAACAAAAATCTCGCCTGATATTGGTGACGTCAAAAATGCC
ATGCCAGGGCTTTTGGAGGTAGGAACACGTGGCGAGATCAAACAAGTAAA
AGTTCTTGGAGTCATGGCTTTGATTGACGAAGGAGAAACAGATTGGAAAG
TCATTGCTATTGATGTCAACGATCCTTTGGCCGAAAAATTGAACGACCTG
GGAAGACCCAAACATCACTGATGAACACACTGGTCAAAAAGGTGACGGTG
ACCCAATTGATGTTTGTGAGATTGGATACAAGATTTCTACAAAAGACTTT
ATGAATCCAATTAAGCAAGATGTCAAAAAAGGAAAGATGAGGTTTGTCAA
GAACAGCTTCCCATACAAAGGTTACATGTGGAATTATGGTGCTATTCCCC
AGAATGGAGTATATAATATGGTTGTGGAAATTCCCAAATGGACAAATGCA
AAAATGGAGGTAATGAAAATGGAATCATTTCTCCATTCCACGACATTCCT
CTTATGGCTGACGAAAAGATGCTCGGATGCGGGAAGCGGGTAATGGGAAG
GCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTACCTCGTGTCCA
CACCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTGCAGAAGAATG
TCCTACCAATTTCAAGAATTCGGAACACCATTCACTGACAACTACCGTGT
CTTCTTTCCAACCCGAACTCACAAAGCCAGCTGATCGCCCTGCTGACGTC
GACATGATGTATTACCTAACTGCAGAGCAGAAGAAATGATGAAAATGTCG
CTGTAGCTGATTCACCATACAAAGTCACCTCCGATAAAGCTAATGTTGCT
GTTGAAGGGGCAACATACGATTGGTTTAGACATTACAAAATGCCAGCAGG
TTCACCTGCCAACGAATTTGCTTTCAACGGGGAAGCTAAAGATAAAGCCT
TCACTGTCGGTGTTCTAAACGAGCTTCATGAACAATGGAAGAAATTAATC
ATGAAAAATGTTGAAAATAACAAAAATCTCGCCTGATATTGGTGACGTCA
AAAATGCCATGCCAGGGCTTTTGGAGGTAGGAACACGTGGCGAGATCAAA
CAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTGACGAAGGAGAAACAGA
TTGGAAAGTCATTGCTATTGATGTCAACGATCCTTTGGCCGAAAAATTGA
ACGACCTGGGAAGACCCAAACATCACTGATGAACACACTGGTCAAAAAGG
TGACGGTGACCCAATTGATGTTTGTGAGATTGGATACAAGATTTCTACAA
AAGACTTTATGAATCCAATTAAGCAAGATGTCAAAAAAGGAAAGATGAGG
TTTGTCAAGAACAGCTTCCCATACAAAGGTTACATGTGGAATTATGGTGC
TATTCCCCAGAATGGAGTATATAATATGGTTGTGGAAATTCCCAAATGGA
CAAATGCAAAAATGGAGGTAATGAAAATGGAATCATTTCTCCATTCCACG
ACATTCCTCTTATGGCTGACGAAAAGATGCTCGGATGCGGGAAGCGGGTA
ATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTACCT
CGTGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTGCA
GAAGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCACTGACAAC
TACCGTGTCTTCTTTCCAACCCGAACTCACAAAGCCAGCTGATCGCCCTG
CTGACGTCGACATGATGTATTACCTAACTGCAGAGCAGAAGAAATGATGA
AAATGTCGCTGTAGCTGATTCACCATACAAAGTCACCTCCGATAAAGCTA
ATGTTGCTGTTGAAGGGGCAACATACGATTGGTTTAGACATTACAAAATG
CCAGCAGGTTCACCTGCCAACGAATTTGCTTTCAACGGGGAAGCTAAAGA
TAAAGCCTTCACTGTCGGTGTTCTAAACGAGCTTCATGAACAATGGAAGA
AATTAATCATGAAAAATGTTGAAAATAACAAAAATCTCGCCTGATATTGG
TGACGTCAAAAATGCCATGCCAGGGCTTTTGGAGGTAGGAACACGTGGCG
AGATCAAACAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTGACGAAGGA
GAAACAGATTGGAAAGTCATTGCTATTGATGTCAACGATCCTTTGGCCGA
AAAATTGAACGACCTGGGAAGACCCAAACATCACTGATGAACACACTGGT
CAAAAAGGTGACGGTGACCCAATTGATGTTTGTGAGATTGGATACAAGAT
TTCTACAAAAGACTTTATGAATCCAATTAAGCAAGATGTCAAAAAAGGAA
AGATGAGGTTTGTCAAGAACAGCTTCCCATACAAAGGTTACATGTGGAAT
TATGGTGCTATTCCCCAGAATGGAGTATATAATATGGTTGTGGAAATTCC
CAAATGGACAAATGCAAAAATGGAGGTAATGAAAATGGAATCATTTCTCC
ATTCCACGACATTCCTCTTATGGCTGACGAAAAGATGCTCGGATGCGGGA
AGCGGGTAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACG
TGCTACCTCGTGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAA
CATTTGCAGAAGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCA
CTGACAACTACCGTGTCTTCTTTCCAACCCGAACTCACAAAGCCAGCTGA
TCGCCCTGCTGACGTCGACATGATGTATTACCTAACTGCAGAGCAGAAGA
AATGATGAAAATGTCGCTGTAGCTGATTCACCATACAAAGTCACCTCCGA
TAAAGCTAATGTTGCTGTTGAAGGGGCAACATACGATTGGTTTAGACATT
ACAAAATGCCAGCAGGTTCACCTGCCAACGAATTTGCTTTCAACGGGGAA
GCTAAAGATAAAGCCTTCACTGTCGGTGTTCTAAACGAGCTTCATGAACA
ATGGAAGAAATTAATCATGAAAAATGTTGAAAATAACAAAAATCTCGCCT
GATATTGGTGACGTCAAAAATGCCATGCCAGGGCTTTTGGAGGTAGGAAC
ACGTGGCGAGATCAAACAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTG
ACGAAGGAGAAACAGATTGGAAAGTCATTGCTATTGATGTCAACGATCCT
TTGGCCGAAAAATTGAACGACCTGGGAAGACCCAAACATCACTGATGAAC
ACACTGGTCAAAAAGGTGACGGTGACCCAATTGATGTTTGTGAGATTGGA
TACAAGATTTCTACAAAAGACTTTATGAATCCAATTAAGCAAGATGTCAA
AAAAGGAAAGATGAGGTTTGTCAAGAACAGCTTCCCATACAAAGGTTACA
TGTGGAATTATGGTGCTATTCCCCAGAATGGAGTATATAATATGGTTGTG
GAAATTCCCAAATGGACAAATGCAAAAATGGAGGTAATGAAAATGGAATC
ATTTCTCCATTCCACGACATTCCTCTTATGGCTGACGAAAAGATGCTCGG
ATGCGGGAAGCGGGTAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGA
TTGCCACGTGCTACCTCGTGTCCACACCTACCAGTAACATCATTCCTTTA
GTTAGAAACATTTGCAGAAGAATGTCCTACCAATTTCAAGAATTCGGAAC
ACCATTCACTGACAACTACCGTGTCTTCTTTCCAACCCGAACTCACAAAG
CCAGCTGATCGCCCTGCTGACGTCGACATGATGTATTACCTAACTGCAGA
GCAGAAGAAATGATGAAAATGTCGCTGTAGCTGATTCACCATACAAAGTC
ACCTCCGATAAAGCTAATGTTGCTGTTGAAGGGGCAACATACGATTGGTT
TAGACATTACAAAATGCCAGCAGGTTCACCTGCCAACGAATTTGCTTTCA
ACGGGGAAGCTAAAGATAAAGCCTTCACTGTCGGTGTTCTAAACGAGCTT
CATGAACAATGGAAGAAATTAATCATGAAAAATGTTGAAAATAACAAAAA
TCTCGCCTGATATTGGTGACGTCAAAAATGCCATGCCAGGGCTTTTGGAG
GTAGGAACACGTGGCGAGATCAAACAAGTAAAAGTTCTTGGAGTCATGGC
TTTGATTGACGAAGGAGAAACAGATTGGAAAGTCATTGCTATTGATGTCA
ACGATCCTTTGGCCGAAAAATTGAACGACCTGGGAAGACCCAAACATCAC
TGATGAACACACTGGTCAAAAAGGTGACGGTGACCCAATTGATGTTTGTG
AGATTGGATACAAGATTTCTACAAAAGACTTTATGAATCCAATTAAGCAA
GATGTCAAAAAAGGAAAGATGAGGTTTGTCAAGAACAGCTTCCCATACAA
AGGTTACATGTGGAATTATGGTGCTATTCCCCAGAATGGAGTATATAATA
TGGTTGTGGAAATTCCCAAATGGACAAATGCAAAAATGGAGGTAATGAAA
ATGGAATCATTTCTCCATTCCACGACATTCCTCTTATGGCTGACGAAAAG
ATGCTCGGATGCGGGAAGCGGGTAATGGGAAGGCTATTTCCTCTCTCTTC
CCTATCGATTGCCACGTGCTACCTCGTGTCCACACCTACCAGTAACATCA
TTCCTTTAGTTAGAAACATTTGCAGAAGAATGTCCTACCAATTTCAAGAA
TTCGGAACACCATTCACTGACAACTACCGTGTCTTCTTTCCAACCCGAAC
TCACAAAGCCAGCTGATCGCCCTGCTGACGTCGACATGATGTATTACCTA
ACTGCAGAGCAGAAGAAATGATGAAAATGTCGCTGTAGCTGATTCACCAT
ACAAAGTCACCTCCGATAAAGCTAATGTTGCTGTTGAAGGGGCAACATAC
GATTGGTTTAGACATTACAAAATGCCAGCAGGTTCACCTGCCAACGAATT
TGCTTTCAACGGGGAAGCTAAAGATAAAGCCTTCACTGTCGGTGTTCTAA
ACGAGCTTCATGAACAATGGAAGAAATTAATCATGAAAAATGTTGAAAAT
AACAAAAATCTCGCCTGATATTGGTGACGTCAAAAATGCCATGCCAGGGC
TTTTGGAGGTAGGAACACGTGGCGAGATCAAACAAGTAAAAGTTCTTGGA
GTCATGGCTTTGATTGACGAAGGAGAAACAGATTGGAAAGTCATTGCTAT
TGATGTCAACGATCCTTTGGCCGAAAAATTGAACGACCTGGGAAGACCCA
AACATCACTGATGAACACACTGGTCAAAAAGGTGACGGTGACCCAATTGA
TGTTTGTGAGATTGGATACAAGATTTCTACAAAAGACTTTATGAATCCAA
TTAAGCAAGATGTCAAAAAAGGAAAGATGAGGTTTGTCAAGAACAGCTTC
CCATACAAAGGTTACATGTGGAATTATGGTGCTATTCCCCAGAATGGAGT
ATATAATATGGTTGTGGAAATTCCCAAATGGACAAATGCAAAAATGGAGG
TAATGAAAATGGAATCATTTCTCCATTCCACGACATTCCTCTTATGGCTG
ACGAAAAGATGCTCGGATGCGGGAAGCGGGTAATGGGAAGGCTATTTCCT
CTCTCTTCCCTATCGATTGCCACGTGCTACCTCGTGTCCACACCTACCAG
TAACATCATTCCTTTAGTTAGAAACATTTGCAGAAGAATGTCCTACCAAT
TTCAAGAATTCGGAACACCATTCACTGACAACTACCGTGTCTTCTTTCCA
ACCCGAACTCACAAAGCCAGCTGATCGCCCTGCTGACGTCGACATGATGT
ATTACCTAACTGCAGAGCAGAAGAAATGATGAAAATGTCGCTGTAGCTGA
TTCACCATACAAAGTCACCTCCGATAAAGCTAATGTTGCTGTTGAAGGGG
CAACATACGATTGGTTTAGACATTACAAAATGCCAGCAGGTTCACCTGCC
AACGAATTTGCTTTCAACGGGGAAGCTAAAGATAAAGCCTTCACTGTCGG
TGTTCTAAACGAGCTTCATGAACAATGGAAGAAATTAATCATGAAAAATG
TTGAAAATAACAAAAATCTCGCCTGATATTGGTGACGTCAAAAATGCCAT
GCCAGGGCTTTTGGAGGTAGGAACACGTGGCGAGATCAAACAAGTAAAAG
TTCTTGGAGTCATGGCTTTGATTGACGAAGGAGAAACAGATTGGAAAGTC
ATTGCTATTGATGTCAACGATCCTTTGGCCGAAAAATTGAACGACCTGGG
AAGACCCAAACATCACTGATGAACACACTGGTCAAAAAGGTGACGGTGAC
CCAATTGATGTTTGTGAGATTGGATACAAGATTTCTACAAAAGACTTTAT
GAATCCAATTAAGCAAGATGTCAAAAAAGGAAAGATGAGGTTTGTCAAGA
ACAGCTTCCCATACAAAGGTTACATGTGGAATTATGGTGCTATTCCCCAG
AATGGAGTATATAATATGGTTGTGGAAATTCCCAAATGGACAAATGCAAA
AATGGAGGTAATGAAAATGGAATCATTTCTCCATTCCACGACATTCCTCT
TATGGCTGACGAAAAGATGCTCGGATGCGGGAAGCGGGTAATGGGAAGGC
TATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTACCTCGTGTCCACA
CCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTGCAGAAGAATGTC
CTACCAATTTCAAGAATTCGGAACACCATTCACTGACAACTACCGTGTCT
TCTTTCCAACCCGAACTCACAAAGCCAGCTGATCGCCCTGCTGACGTCGA
CATGATGTATTACCTAACTGCAGAGCAGAAGAAATGATGAAAATGTCGCT
GTAGCTGATTCACCATACAAAGTCACCTCCGATAAAGCTAATGTTGCTGT
TGAAGGGGCAACATACGATTGGTTTAGACATTACAAAATGCCAGCAGGTT
CACCTGCCAACGAATTTGCTTTCAACGGGGAAGCTAAAGATAAAGCCTTC
ACTGTCGGTGTTCTAAACGAGCTTCATGAACAATGGAAGAAATTAATCAT
GAAAAATGTTGAAAATAACAAAAATCTCGCCTGATATTGGTGACGTCAAA
AATGCCATGCCAGGGCTTTTGGAGGTAGGAACACGTGGCGAGATCAAACA
AGTAAAAGTTCTTGGAGTCATGGCTTTGATTGACGAAGGAGAAACAGATT
GGAAAGTCATTGCTATTGATGTCAACGATCCTTTGGCCGAAAAATTGAAC
GACCTGGGAAGACCCAAACATCACTGATGAACACACTGGTCAAAAAGGTG
ACGGTGACCCAATTGATGTTTGTGAGATTGGATACAAGATTTCTACAAAA
GACTTTATGAATCCAATTAAGCAAGATGTCAAAAAAGGAAAGATGAGGTT
TGTCAAGAACAGCTTCCCATACAAAGGTTACATGTGGAATTATGGTGCTA
TTCCCCAGAATGGAGTATATAATATGGTTGTGGAAATTCCCAAATGGACA
AATGCAAAAATGGAGGTAATGAAAATGGAATCATTTCTCCATTCCACGAC
ATTCCTCTTATGGCTGACGAAAAGATGCTCGGATGCGGGAAGCGGGTAAT
GGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTGCTACCTCG
TGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAACATTTGCAGA
AGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCACTGACAACTA
CCGTGTCTTCTTTCCAACCCGAACTCACAAAGCCAGCTGATCGCCCTGCT
GACGTCGACATGATGTATTACCTAACTGCAGAGCAGAAGAAATGATGAAA
ATGTCGCTGTAGCTGATTCACCATACAAAGTCACCTCCGATAAAGCTAAT
GTTGCTGTTGAAGGGGCAACATACGATTGGTTTAGACATTACAAAATGCC
AGCAGGTTCACCTGCCAACGAATTTGCTTTCAACGGGGAAGCTAAAGATA
AAGCCTTCACTGTCGGTGTTCTAAACGAGCTTCATGAACAATGGAAGAAA
TTAATCATGAAAAATGTTGAAAATAACAAAAATCTCGCCTGATATTGGTG
ACGTCAAAAATGCCATGCCAGGGCTTTTGGAGGTAGGAACACGTGGCGAG
ATCAAACAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTGACGAAGGAGA
AACAGATTGGAAAGTCATTGCTATTGATGTCAACGATCCTTTGGCCGAAA
AATTGAACGACCTGGGAAGACCCAAACATCACTGATGAACACACTGGTCA
AAAAGGTGACGGTGACCCAATTGATGTTTGTGAGATTGGATACAAGATTT
CTACAAAAGACTTTATGAATCCAATTAAGCAAGATGTCAAAAAAGGAAAG
ATGAGGTTTGTCAAGAACAGCTTCCCATACAAAGGTTACATGTGGAATTA
TGGTGCTATTCCCCAGAATGGAGTATATAATATGGTTGTGGAAATTCCCA
AATGGACAAATGCAAAAATGGAGGTAATGAAAATGGAATCATTTCTCCAT
TCCACGACATTCCTCTTATGGCTGACGAAAAGATGCTCGGATGCGGGAAG
CGGGTAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATTGCCACGTG
CTACCTCGTGTCCACACCTACCAGTAACATCATTCCTTTAGTTAGAAACA
TTTGCAGAAGAATGTCCTACCAATTTCAAGAATTCGGAACACCATTCACT
GACAACTACCGTGTCTTCTTTCCAACCCGAACTCACAAAGCCAGCTGATC
GCCCTGCTGACGTCGACATGATGTATTACCTAACTGCAGAGCAGAAGAAA
TGATGAAAATGTCGCTGTAGCTGATTCACCATACAAAGTCACCTCCGATA
AAGCTAATGTTGCTGTTGAAGGGGCAACATACGATTGGTTTAGACATTAC
AAAATGCCAGCAGGTTCACCTGCCAACGAATTTGCTTTCAACGGGGAAGC
TAAAGATAAAGCCTTCACTGTCGGTGTTCTAAACGAGCTTCATGAACAAT
GGAAGAAATTAATCATGAAAAATGTTGAAAATAACAAAAATCTCGCCTGA
TATTGGTGACGTCAAAAATGCCATGCCAGGGCTTTTGGAGGTAGGAACAC
GTGGCGAGATCAAACAAGTAAAAGTTCTTGGAGTCATGGCTTTGATTGAC
GAAGGAGAAACAGATTGGAAAGTCATTGCTATTGATGTCAACGATCCTTT
GGCCGAAAAATTGAACGACCTGGGAAGACCCAAACATCACTGATGAACAC
ACTGGTCAAAAAGGTGACGGTGACCCAATTGATGTTTGTGAGATTGGATA
CAAGATTTCTACAAAAGACTTTATGAATCCAATTAAGCAAGATGTCAAAA
AAGGAAAGATGAGGTTTGTCAAGAACAGCTTCCCATACAAAGGTTACATG
TGGAATTATGGTGCTATTCCCCAGAATGGAGTATATAATATGGTTGTGGA
AATTCCCAAATGGACAAATGCAAAAATGGAGGTAATGAAAATGGAATCAT
TTCTCCATTCCACGACATTCCTCTTATGGCTGACGAAAAGATGCTCGGAT
GCGGGAAGCGGGTAATGGGAAGGCTATTTCCTCTCTCTTCCCTATCGATT
GCCACGTGCTACCTCGTGTCCACACCTACCAGTAACATCATTCCTTTAGT
TAGAAACATTTGCAGAAGAATGTCCTACCAATTTCAAGAATTCGGAACAC
CATTCACTGACAACTACCGTGTCTTCTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017348XLOC_017348Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030300-proteinTCONS_00030300-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030300-exon-sc0000806-1575043694:9098..9515TCONS_00030300-exon-sc0000806-1575043694:9098..9515Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:6414..6472TCONS_00030300-exon-sc0000806-1575043694:6414..6472Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:5853..5909TCONS_00030300-exon-sc0000806-1575043694:5853..5909Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:5179..5298TCONS_00030300-exon-sc0000806-1575043694:5179..5298Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:4615..4701TCONS_00030300-exon-sc0000806-1575043694:4615..4701Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:4187..4313TCONS_00030300-exon-sc0000806-1575043694:4187..4313Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:3573..3613TCONS_00030300-exon-sc0000806-1575043694:3573..3613Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:3150..3325TCONS_00030300-exon-sc0000806-1575043694:3150..3325Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:2823..2892TCONS_00030300-exon-sc0000806-1575043694:2823..2892Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1575043694:1216..2545TCONS_00030300-exon-sc0000806-1575043694:1216..2545Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:9098..9515TCONS_00030300-exon-sc0000806-1510915933:9098..9515Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:6414..6472TCONS_00030300-exon-sc0000806-1510915933:6414..6472Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:5853..5909TCONS_00030300-exon-sc0000806-1510915933:5853..5909Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:5179..5298TCONS_00030300-exon-sc0000806-1510915933:5179..5298Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:4615..4701TCONS_00030300-exon-sc0000806-1510915933:4615..4701Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:4187..4313TCONS_00030300-exon-sc0000806-1510915933:4187..4313Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:3573..3613TCONS_00030300-exon-sc0000806-1510915933:3573..3613Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:3150..3325TCONS_00030300-exon-sc0000806-1510915933:3150..3325Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:2823..2892TCONS_00030300-exon-sc0000806-1510915933:2823..2892Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1510915933:1216..2545TCONS_00030300-exon-sc0000806-1510915933:1216..2545Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:9098..9515TCONS_00030300-exon-sc0000806-1491911889:9098..9515Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:6414..6472TCONS_00030300-exon-sc0000806-1491911889:6414..6472Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:5853..5909TCONS_00030300-exon-sc0000806-1491911889:5853..5909Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:5179..5298TCONS_00030300-exon-sc0000806-1491911889:5179..5298Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:4615..4701TCONS_00030300-exon-sc0000806-1491911889:4615..4701Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:4187..4313TCONS_00030300-exon-sc0000806-1491911889:4187..4313Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:3573..3613TCONS_00030300-exon-sc0000806-1491911889:3573..3613Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:3150..3325TCONS_00030300-exon-sc0000806-1491911889:3150..3325Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:2823..2892TCONS_00030300-exon-sc0000806-1491911889:2823..2892Clytia hemisphaericaexon
TCONS_00030300-exon-sc0000806-1491911889:1216..2545TCONS_00030300-exon-sc0000806-1491911889:1216..2545Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000806supercontigsc0000806:1216..9515 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
444.516	463.494	319.575	296.527	38.3842	30.4978	68.1378	71.3132	140.55	120.483	142.448	203.371	220.159	220.854	204.507	207.689	136.488	149.095	65.0378	72.236	138.168	133.995	272.325	243.406	156.027	159.756	132.582	142.727	166.386	165.907
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR008162Pyrophosphatase
Vocabulary: Molecular Function
TermDefinition
GO:0004427inorganic diphosphatase activity
GO:0000287magnesium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006796phosphate-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006796 phosphate-containing compound metabolic process
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004427 inorganic diphosphatase activity
molecular_function GO:0000287 magnesium ion binding
Blast
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BLAST of TCONS_00030300 vs. Swiss-Prot (Human)
Match: IPYR (Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 PE=1 SV=2)

HSP 1 Score: 337.421 bits (864), Expect = 3.217e-108
Identity = 166/285 (58.25%), Postives = 204/285 (71.58%), Query Frame = 1 
Query:  364 YQFQEFGTPFTDNYRVFFRNENG-IISPFHDIPLMADEKNGVYNMVVEIPKWTNAKMEISTKDFMNPIKQDVKKGKMRFVKNSFPYKGYMWNYGAIPQTWEDPNITDEHTGQKGDGDPIDVCEIGYKVGTRGEIKQVKVLGVMALIDEGETDWKVIAIDVNDPLAEKLNDIGDVKNAMPGLLEATYDWFRHYKMPAGSPANEFAFNGEAKDKAFTVGVLNELHEQWKKLIMKNVENNKNLACENVAVADSPYKVTSDKANVAVEGQPELTKPA-DRPADVDMMYY 1212
            +  +E   PF+  YRVF +NE G  ISPFHDIP+ AD+   V++MVVE+P+W+NAKMEI+TKD +NPIKQDVKKGK+R+V N FPYKGY+WNYGAIPQTWEDP   D+HTG  GD DPIDVCEIG KV  RGEI  VKVLG++A+IDEGETDWKVIAI+V+DP A   NDI DVK   PG LEAT DWFR YK+P G P NEFAFN E KDK F + ++   H+ WK L+ K   N K ++C N  +++SP+K   D A   V+  P   + A   P DVD  ++
Sbjct:    4 FSTEERAAPFSLEYRVFLKNEKGQYISPFHDIPIYADKD--VFHMVVEVPRWSNAKMEIATKDPLNPIKQDVKKGKLRYVANLFPYKGYIWNYGAIPQTWEDPGHNDKHTGCCGDNDPIDVCEIGSKVCARGEIIGVKVLGILAMIDEGETDWKVIAINVDDPDAANYNDINDVKRLKPGYLEATVDWFRRYKVPDGKPENEFAFNAEFKDKDFAIDIIKSTHDHWKALVTKKT-NGKGISCMNTTLSESPFKCDPDAARAIVDALPPPCESACTVPTDVDKWFH 285
The following BLAST results are available for this feature:
BLAST of TCONS_00030300 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
IPYR3.217e-10858.25Inorganic pyrophosphatase OS=Homo sapiens GN=PPA1 ... [more]
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