TCONS_00030232 (transcript) - C. hemisphaerica

Overview
NameTCONS_00030232
Unique NameTCONS_00030232
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00030232 ID=TCONS_00030232|Name=TCONS_00030232|organism=Clytia hemisphaerica|type=transcript|length=1816bp
cgttttcaaaaactttaatcATATCAGGAACTGCAGATCAATATGAACCT
TAGGGTAGAACTTTAGTTCTGTGtgcaaaaaaaatatgaacCTATAAAAT
ATGACTTCGGGTCCAAATATAATCAGTGTTGTGTTAATCAGAAAGTGTTA
AATTTTGGAAAGAGGAACTGCAGTGAGAGCACCATGAAATTTTTATTGGT
AATATTGGCAATAACAGACCTTGCAAATGGTTTTACAGTCGAGAAGCCTC
TTTTTGAAGACGATTGGACGAAATATGATTCCACAACCACATCTTTTTCC
GCCCAGCAGAGCTATTACGCCAAACGCCCTGGCGCCGCCACTAACACCCA
TTCTTGTGATCAAATCAGAAATCAAGTACCACGTCATTTGACTTTTATCA
CAAGatatcgattttatcaaaaatacactGAAGCTTACGGCATCCCTGTC
GTTTCATCGGGAAGTGTCAGCGACAAAGCCCTCCGACGAGCTTGCCATAT
CACACGGTTCTTGTTTGCCGATCGATATGACTTGCGCAATTCCTTTTATA
AAAACGAAGGACGATTTGCAGTAATTGCTATTCGAGAACAAACGACTACA
ATCCCAGAATTCAGCCACTTACCGGCGTGGTGGAATCAGCGTGCTCGGGG
TCTTGGTGGGGTCCTTGGACGGCCCATCTCATGTGGAGGAGAGGAAAATG
TTCTTTGTTTAAGACAAGACCGTTACTATGGTGATGATATCTTTTTCCAT
GAGGCTGCACATGGCGTCGCCGAAGTTGGTATGGCTGGTGGTTTGCAATC
AATGTACCAAAGACTGAAGGGATTATACAATTCAGCTCGCAGATCCGGCA
AATGGAGAAACACTTATGCTATGACTGATTCAAGAGAATACTTTGCTGAA
GGTCTTCAGAGCTACTTCAACAATCATATCGAAGGACCAAATCCACCCAA
TGGAGTCCATGGACCAATCAACACACGTGCTGAATTGAGATCTTATGACC
CAGGACTCTATAATTTAATCAAAGAATTATACCCGTGTGGAAACACTTAT
CATTGGTGCAAAGAAAATGCTGCTGGATCGAACCTCCGTATGAACTGTGA
TGGAACAGGACCAATTATTACTCAAGCACCACAAACCAAAGCACCAACAG
ATGCTCCTAAACCACAGACCACGGAAGATCCGATCCCTCCAATTCCTGAC
ACTACACAGCCTCCTCCAAgttGCAAAGACCACAACCGTTATTGTGCAGC
ATGGTCAAAATATGGTTATTGTGATTCAAATGGTTACGTTAAGAAATATT
GTAAACTTTCATGTAACACGTGCTAAGCAAGCATTTGAATCCGCTGAAAT
GAGTGGATTATATATACAGTNCAGCATGGTCAAAGTATGGTTACTGTGGT
TCGAATGGTTACGTTAAGAAATATTGTAAACTTTCATGTAACACGTGCTA
AGCAAGCATTTGAATCTGTTGAAATGAGTGGATTATATAAATTGTTGACA
CTTTATTATTCAGCATTCTCCAATTCGATACACGCTCCATtatcgataat
attgaaattcacCGTCAACGAGAACTCTCATAAACAATGTTctattattc
gatgaaaatatgatatcctttgaaaatcgaattcaaaattttgaaactga
aactTAAAAAACAGTGTTCATAAATTTTgactttattattttgtttaagA
TTATACCTCTATATTATTTGAGAGAGTTAAATTTTGTACAgagatttttc
atttattttaccAAGAAAACATGTTATAATAAATTTCACTTCTTCTAAGT
AGTTTTCACATCCCAT
Run BLAST on NCBI

transcript from alignment at sc0000802:99619..118693+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00030232 ID=TCONS_00030232|Name=TCONS_00030232|organism=Clytia hemisphaerica|type=transcript|length=19075bp|location=Sequence derived from alignment at sc0000802:99619..118693+ (Clytia hemisphaerica)
cgttttcaaaaactttaatcATATCAGGAACTGCAGATCAATATGAACCT
TAGGGTAGAACTTTAGTTCTGTGtgcaaaaaaaatatgaacCTATAAAAT
ATGACTTCGGGTCCAAATATAATCAGTGTTGTGTTAATCAGAAAGTGTTA
AATTTTGGAAAGAGGAACTGCAGTGAGAGCACCATGAAATTTTTATTGGT
AATATTGGCAATAACAGGTAGGCTCCTTTTACAATTTTGAGAGTCAGGGG
TTTTGAAAATTACTCTTCATTTTGAAGGAACCAGTAAATTTCAACTAAcc
cacacaacgttgtttcaacgtccatctaatgttTACAACGTCAATATAAC
GTttgataaacgttgaaacaacgttgtgtgccagctgggaaggctcggct
gtttttatttttttggcaattgaactgagtcttaaaatgttcttaaatca
TGTTATTATTTTCACAGAAATATTAAGGTATTCTAGGCTTTTTACGTGAG
TGGTTTTTAATGTCTTGACCCATACTCATTGTCGTTGTTCTTTAGTCTTA
TTTCTcacgattttgagcctcattattcttataaaaaatgttgttaaaat
GCGGTAAGAAAGCCAATGAAGAAGTCACCAAGGGGATAGCAGGAGTTACT
TAGGGTGCTGGATAtgggaaaaggtctattttagtAATACAAAAAAACTA
ATCTCCAACAGAAATTTTCTGAAGCGATGAAGgtacgaaaaaaaattgaa
aaagttgttAAAGAATTTCTCTTCGTCGCAAAAATAGCCGCTATTTCGCT
TAGAtgattgtaaaaaaatttatgcTTGAACTTCTAGCCGCTCATTTTTC
GGTGGTTCGGTCCGGTACATACCTGACGTTGCCCAACCCTGTACCCCGTG
TTTTTAAgacacccctatctcacagccccggtgaaactttttcctacagc
ggggataaaaatttcgattgaaatctcaatggggatcaaaattttattgt
tagggttagggttagttagggtccagtggggatggtttttgagtgcaatt
ttttaaacattgaatctcgaatggggatgaaattaaagtaaatttcccag
tggggctgaaattctagggtatttttcccaccggggacgaagtttttgcc
aaatttaccAATGGGGGGGGGCAGccggtctgtgacacaggggtgttttt
aagGATACTATGAATGACCAGCtaccttcccagctggcacacaacacaCA
ACCGAGTGAAAAACGAAAAGCAGCCTAAAATGGTCAACTGTCTAACAAGG
ACTGAGATTAATTTATTTGGACTAAAACGAATTAAACATATTGTTTACAA
TCTAAACCACTAGAGTGAAGTATTTAAAAAACCTGATAcatcatttttat
ttactttatctGTTTTATGTCACCTTACCATAACAACTTTAAAACTGTTA
AACTGGAAATAGATTTTGATACCTGCTATACAATAACATAGGTGTTATTa
tatgatacacgtttttttaataagaacaaactaattaagaacataaggct
tcaatggccgaaatgttaagaacaagttaagaacattttcaggctttgcC
GACTCTTAAACAGCtggtttcttagaaaaatgggcaaatatgctcaaaaa
attgtgaaaaaaagaactaccctgagtatcaaaggttaagttttcaaaga
aaatagtaacctctgaagacaaataatataaattttatcgcgcatgtgtc
aatctaatcactgtagaaaaaatcaaagatgaagagcaaatattaccata
ttaatgtctaacagactgtatcagtatgcagtttaatctttacgaattcc
ccaaatcttttacatgatccccaaatgtataacagtaattactaaacttt
taaatatggaaatgtcactttaattgaatcgaaataatagacagacttta
tgttatgattctctatcactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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catggttacttttatcttcgctgattgcgcgatgaatagaatctcgattc
gtcggcacagcgtaaatatatgattttgagctgtgcttttcacggtaaaa
aagaacatgttaagaacatttttaggtttaaaactcaaaaagttataaac
attcgaagacttcaaaaatactGGATGTTCTCGTAATGTGttagtttgta
tctttttaTGACTAATATCCTTTAACGCTGCTTTACTAATGCCTTGTTTA
CACTGGGGGTTTTCATGGTTGATGGAGGatcggaatcggcccttttttcg
gacggagttgcggaatttggcgaaaatttagacggaattaccgAAATTGG
GTTCTCCAACAGAGACGGAAAATTAggcaattttagtgcggaaaaacgga
atttagcaaaacgTTTTACGGAATTTTGGAATTCGCAAAAAATATTCgag
attcgcgaaatttttgacaaaaaccttgattttcaaaggaattttcggta
gCGGAATTTCGGTTCATTTTTACGGTTTGACGGAAagtggagaaaaaatt
ggcggaattgcggaatcgggtaccccctgaaaacCCACTCAGGGattttt
tcaagcactttgagcTACTACCGTTTTTGTATAATTAGATTGAGTTTAAG
ATGCGtaaaaattgattgatttagAGCAGGGGGTCTGGGGTCTGGGGTCT
GGAAAACTtttactccaaatttggccctggaTTGCTTTAAACAAGAACAA
AAGGTGAAAACATTAACGCCGCTTAAGtaaaaatagaaagattttggccc
attttacgcccagggttcgaattataaattttaagcGATAGATAAACGAG
CGAATAAAGTAACCGAGTTGATAAagtaatagataaacgagtgaatttTA
ATGTAGCGAAGGAGCTTCGCAATTTTTCCTAGAGAAGCGAGGTAAAAAAg
gagcgccgcaggcgaaatttttacattgtttgcgaaacatttttagtatt
ttgcgatGTTATTTGGAAGAAAATGCAAAAGTATCTTCAGTTCATTTCTC
TAGAATAGCGAAGTAAGAGGTTATAGACAAAGCAAAGTATATTTAAGTTT
TGAAGTaacgagtagataaagcaatagataaacgaatgaagaaagttgcg
GTAGCGAGTATACAAAGCAATAAATAAACGAGAGAATATattagcgaagt
agcgagtatataaagcaatagataaacgaatgaataaagtagcgaagtgg
ctaGATGATAAAGCGATGGATAAACGAGCGAATAAAGTAACCGAGTTGAT
AAagtaatagataaacgagtgaataagtGGCGAAgcagcaagttgataaa
gcaatagataaacgaatgaataaagtggCGAAGTGGCAAGTAGATGAAGA
AATAGATagacgaatgaataaagtagagaagaagcgagttgataaagcaa
tagataaacgaatgaataaagtagcgaagtggctaGATGATAAAGCGATG
GATAAACGAGCGAATAAAGTAACCGAGTTGATAAagtaatagataaacga
gtgaataagtGGCGAAgcagcaagttgataaagcaatagataaacgaatg
aataaagtagcgaagtggctaGATGATAAAGCGATGGATAAACGAGCGAA
TAAAGTAACCGAGTTGATAAagtaatagataaacgagtgaataagtGGCG
AAgcagcaagttgataaagcaatagataaacgaatgaataaagtagcgaa
gtggctaGATGATAAAGCGATGGATAAACGAGCGAATAAAGTAACCGAGT
TGATAAagtaatagataaacgagtgaataagtGGCGAAgcagcaagttga
taaagcaatagataaacgaatgaataaagtagcgaagtggctaGATGATA
AAGCGATGGATAAACGAGCGAATAAAGTAACCGAGTTGATAAagtaatag
ataaacgagtgaataagtGGCGAAgcagcaagttgataaagcaatagata
aacgaatgaataaagtagcgaagtggctaGATGATAAAGCGATGGATAAA
CGAGCGAATAAAGTAACCGAGTTGATAAagtaatagataaacgagtgaat
aagtGGCGAAgcagcaagttgataaagcaatagataaacgaatgaataaa
gtagcgaagtggctaGATGATAAAGCGATGGATAAACGAGCGAATAAAGT
AACCGAGTTGATAAagtaatagataaacgagtgaataagtGGCGAAgcag
caagttgataaagcaatagataaacgaatgaataaagtagcgaagtggct
aGATGATAAAGCGATGGATAAACGAGCGAATAAAGTAACCGAGTTGATAA
agtaatagataaacgagtgaataagtGGCGAAgcagcaagttgataaagc
aatagataaacgaatgaataaagtagcgaagtggctaGATGATAAAGCGA
TGGATAAACGAGCGAATAAAGTAACCGAGTTGATAAagtaatagataaac
gagtgaataagtGGCGAAgcagcaagttgataaagcaatagataaacgaa
tgaataaagtagcgaagtggcaagtagataaagcaatagataaacgaatg
aaagaagtagcaaaataggtgttttcttataattttttaacttcgcattt
tcgaattaggaaatttttttgggtagctaaatctaaaattcacttcGCAT
TTTGCGAAGTGCGAAGCTATAATTCATCCTCGCATAAAAAAACACCCTAC
CGTTTTTCACGCCGAAGCTATAATTCAATCAAGCTGTGGCGTCAAACTGA
ACGAGACTATCTCTCTCTCTAATTTTTTCTACCTTGAAAAGATCAATAAT
TATCTCACCCTCAAGAATTTAATTTTGGTAAACACCGGATACATAGATAA
AAGGGTCtagtgaaaaacaaaaaagtttgtgAAACATAGCAATGAATGAA
TTCTCtgatgaaaacaatgaaacacatcgAATTTATGACGTGACCGCCTA
CCAAGAAACATAACGAGAGAACACATTTTTTTCCATTCTCTTGTCTTTAC
TCTATACTGATTAAAAACAAATAATTGGCGTTTCTGAGAAAActgctttg
aaacttttttcttgtaaaattNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACATT
GTtatgattatacaatttattatagaattttttaaatattatattgctgc
ggtggcatgttagtgtaagctatgtacTAGTATATTTCGGATTGAGTTTC
ATAACTCAATCTTggattgagtatttttgccggtatacggtggtaaaaaa
gtgcttagaaaaatccttgccactacacttttttatagagggttgtactt
ttacggtgtgacgggattagCCCTTCTTTTTTAGTACAATATTACGGGGT
TTGACTaaaaaagtgacggtattttgaaatcagacggtgacggtatttag
cctatttttttgtcattatgctggtattttaacctctacaaaCCGGTCGT
AAACATTTAATTATTAACGATTCTTTAATGAAAACCGGACTTGAATGAAA
AAGTTGCGTCATATCCCCTTGAGCTTTtctagttttttgttttgttttgt
tattctGTGAAGTACTTAATTACCTATAATTATTGCTGTGATTTATCCTA
AATTTGTGCTAGTTTCGaccttttggaaaatgtcaaatttcataTACTTA
TAGTATTGTGATTATGATAAAAAGAAGTCATCAAAACGTCAAAGatgcaa
aaaattttatttttcgtcttcgcatttttatttaaagttatTTGGTCCAG
TAAGAGATTTTTTCAAGATTGTATATATttgagttttttaaattcattat
cCGGTCATTATCCGGTctaaaaaatgtgaaatttagTTCTGGTTTAAACG
ATCCACTTTTCGCCCTGTCTATGTTGTTCTATGCTGAGTTAAAgtagata
aaaagttaaaaatagcCAATTTTGTGACTGCTTTAAGCCCACTCTAAAGG
CTTGGGTAcatgagaagttttttttgcgttggtgcaatgcaacatgctcc
atctcaCCAATCTGAAACGCGAAAAAACTTTTCGTTTACCCAAGCCTTAA
AAAGCAGTCTAaagccgtctaaactagagctctGTTCTGGTATAAGAAAA
TTCACCGtacagttagccacactaggaaatcaacctttcagaaaaaacaa
caacaagaatgagaattacctgaatcaagttcgcaagacaattaattaaa
acttgaaagtttgaaacaaaataagaCATGCAGCAGCctaaatcaaccaa
ccaaactttgtcattcaattcccaagacagcgcttcgatttttaaggcct
tgtttatacgctaaagtaaaaacaattctgcacatgtaaatgggtcagcg
TTTGAGATCCGGagaaatttccgggaaatatcCTATCCGGCAGTGCACGG
ATGTaagtgggttccgtctcccccgtagatctttttcttgggaagttgat
cttcaaattagttctcaaggttggcttggctcaaatttctCTTCATCTAT
ggctaaaattttaagtttttgagaatgttaatttcattaaaaagcgccgg
gtaattttttcatgagttcctttagaagttttgcggcgcaattttttgat
tgagagtcaggtaaacgatatagcgctttcgcagcattaatctttgatgc
GCATTTTGgcaggacgctagtgtgactaactgccgtAAGCGTAGACTTTT
CGCTCGAATTTactaaattttggctcaatTTTCTCTTCACAATATAAGGG
TTTGATTTCGTTTCATTGACTTCACCCTTCATGGGATAGTGGTTCAAATG
CTAACGTATTTTCATCTCGTTTTAGACCTTGCAAATGGTTTTACAGTCGA
GAAGCCTCTTTTTGAAGACGGTAAGTATATATGTTTatttaaaaggtttt
gtttttaaataagagtgatatcgtttgcttactcatcaattttaatttac
aaactttatgaaattgaactgacatggatgtggagcaagattggccagaa
agagggaaagaaaagcatattttttgtttatatcagcacaatattacatt
aggcagacactgtcctaatatgaaatatgtgtctggtatgaaacggaaac
acttatataaaaataaaacctttatcAGGCGTAAGCAAAAGATTGAGTGT
AAATTACAACAATTCTTCAATGTTGAATCTTTCAAAGTTCAATACATTTT
TACTGGTCAAACTAAAGGACTATACGAGAAATCTTTTATTTATCTTAAAC
TAGTAAACTAGCCTTTTTAATCATCGTGTCAGTAGATGGGTAGTAATAAA
CGAGCGGGCATAAGAGCTGCGTCGGAGAGGGAGGGAACGTTGATGAGAGG
GACCTGATCGGTTCAGGCCTCCTTCACTTACCTAAATCATACGCTCACTT
TTCCTGTGTAAGATTGAAATACCAGTTTAGATTTTTCTTCACGAAAAGAT
TACGTCACTGTTATGCTTCATTTAAATTCTCAGATTGGACGAAATATGAT
TCCACAACCACATCTTTTTCCGCCCAGCAGAGCTATTACGCCAAACGCCC
TGGCGCCGCCACTAACACCCATTCTTGTGATCAAATCAGAAATCAAGTAC
CACGTCATTTGACTTTTATCACAAGGTAAAATGGAATTTGGATCAGTGTT
CAGAAAAGTAGCCTagtattttttagcattttacacccctgtgtcacaga
cccgctgggaccacAGCCCCTTTGAaagatttggtcaaaatttcctCCAC
GGTGGACATTACCCTTACAATTGCAGCCCACTTGGAAATCGACTTTGATT
TCGTCCCCATTTAGAATTCAAtacaaaaaattgcactccaaaaccatccc
cactggatatgTTAAGCcgtgaacaatagaatttctatccccattgggat
ttcaatagaaatttttatcacccactgtgggaaaaagttccaccggggct
gtgagacagtggTGTCATTTTTATCCGTTTAAAATCATCGAGCGATAAGA
ATACACACTTCTCGAAATGCATAAAGTAGTTGAAAGCCTCGTTCCCAAAG
ACTTGTTGTTATGATACTTCAACGGCGTCAGACATAATCAATGCTTACAA
TCGTTTGTATTTGTCAGCTTTTTGCATTTCTAGCTGTTTAagttgtacag
ggtgtccctaattaaggtatcgagtcgaaacacaactatgagtagaaagt
tttatgtgcgtgttcacaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNatggagaacgttcttatattt
tagcgataacacacacaaacttttctactcaatcgcatgttcaaactcga
tactttaattagggacaccctgtataacaCCTACCTACTCCATAAGAAAT
TTTAGGAAGTTTTAGAGGCGTGATTTCAAAAAGGAAAACCATTTTTTAAG
GGGATAAactttgaaaagtcaaaaagttcaGGTAGGgtcaagttttaaaa
tttttatttctatttttagatatcgattttatcaaaaatacactGAAGCT
TACGGCATCCCTGTCGTTTCATCGGGAAGTGTCAGCGACAAAGCCCTCCG
ACGAGCTTGCCATATCACACGGTTCTTGTTTGCCGATCGATATGACTTGC
GCAATTCCTTTTATAAAAACGAAGGACGATTTGCAGTAATTGCTATTCGA
GAACGtaagaactttttatttgagCGTAAATTTACTATTCAAGAGCGTAA
ATATTTCGTATTTTAGCGTAAATTTGCTATTCGAGAACGTAAGAAATTTG
TGATTGTGCGTAAATATGCTATTCAAGAGCGTAAGAAATTAATATTTTAG
CGTAAATCTGCTATTGGAGAACATAGAAAATTCGTATTCGAGCGTAAATT
TGCTATTCGAGAACCAGCTAACAAAGAACGTCAAACGTTATGTATATGAC
GTCGATATACATGACGTCCACGTCCATATTTAAAGTTAAAAGAGGAACGT
CCAAATGACGGCATGCAAGTCGgagtttaattttctttattttctttccc
CTTATTTAGAAACGACTACAATCCCAGAATTCAGCCACTTACCGGCGTGG
TGGAATCAGCGTGCTCGGGGTCTTGGTGGGGTCCTTGGACGGCCCATCTC
ATGTGGAGGAGAGGAAAATGTTCTTTGTTTAAGACAAGACCGTTACTATG
GTGATGATATCTTTTTCCATGAGGCTGCACATGGCGTCGCCGTaagttgt
ttttcaaaataattcgtTAGAAGGAGTCTCGTTACACCGTTTGGGGGAAA
AGCGTTTTTAAGCCTTCAAAGGAAGAAGACCCTTAGagaaactgattttt
gctgaaaaggtaacccttagagagactttttgaaattcttttttcgattt
ttgaaaaaagtcatacccttagagagactttattacaattttttctctgg
aaatcaaaagatttcctaaaaatcttgaattttccaacccttagagagac
taatttaaaactttctgatttttccgaccctcagagagactttgaaaggt
gaaaaaacctacccttaccgtccgcacatacccatcatccatttttgcct
aagtaccccctggGGGTAGAGGTCTCTGCTAATTTAATAATCAAACCACA
AACGTCCAAAAGTTTTTCCACCAAACTTAAATTcgttgaatttctcgagt
ttttTTATCTACTATGTGAAAATACTACGCAACCTCTGTGGCCTAACTGA
AGAGCTTTACGAGTCAGGAGTATCCTTGTAAATTCATGAGGTTATTTGTA
GCTTAAATCGGTTGCAAATACGTATAATTGGCAGAAAACGAAGGAAAGTG
ATTAACAACGTGTTTAATTCTCATTGATCAAGACAACTTAGGATATACTT
AAATGAACCATCATCGACCTCTAAGAAAAAATCGTTTTGGGGTTCAAATT
AGTAAATGTAAGGCAAGCGTTTGCTGCTTCATCATAGTCTGTTATTGTAA
TTTGCTATATAGTTAAAACGTACATCGtcacaggcccggcggaagtgggg
agacttcagcctcctcacttttgagaaaatgagattttttctcaaattgc
tagtgaattttatctcattttgagacttcagcctctccaattttacggtt
gttccaccgggcctgCATGACTCTTACGTTGAGACATACGTCGATGTTTC
TAATTTGGCATTCTAATATTCGAAACGCTCCAGTATTTGATAATACTGAA
AGTCACTCTACAAGAAACTCTCGTAAAATTCCACAAAAtctcagccaaaa
ttttcaaatgttagtccaaatttcaagaaccCTTTGACAgggttgatttt
tgattttagtaATTTTGGGAACCTTACAGCTTTTTACTGATTTTAAAACC
TCTTTGAGGGACTTTCAAGGACGACCAGATACCCGACACCCATTTTACCT
AAGTACCAAGACTGAGAAAATTTTAGTTGGAAATCAAGAATTAGAGAGCC
AACTGTAATTTCACCTCCTTTCACTTTATACTTACAGGAAGTTGGTATGG
CTGGTGGTTTGCAATCAATGTACCAAAGACTGAAGGGATTATACAATTCA
GCTCGCAGATCCGGCAAATGGAGAAACACTTATGCTATGACTGATTCAAG
AGAATACTTTGCTGAAGGTCCGTCGATAAATTTGTAATACTGCCCCCGAG
AGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNtcccgggggggggggggtaaatgacctaccatgc
gtgcggcccttaaggatatattttccaagcttcctAAAGTGAagtgtaag
ggtcgaaatcagcaaagatgagaaatcTGCAccctaagggtgtaaaattt
cgaaaatctgaccatgtttTGCCTCAGAATAGTCagaaatgttcaagaaa
gtgcactataagggtcgatttttcactgaaattttctcaaatgttgtaaa
aaatttttctgcactgtaaacATCCGATTTAAAAGGCTTcattttgggcc
gcacgtatggtcgtttttgaatcaaaCGTCCCCCCTCGGGTAATATTTTT
ATTGACTGCCCTTACGGTTTGATACCTTGCTGACGAATTTCTTTATTTGC
CGCTGgttatttttgattattttttgccGAGGAATCTCTTtgcaaaatga
tttttgataactttgaaCATTATTACGTATCAAAAATGGACACTGGAACT
ATAAAATTGAGTTCAGGAGGAAACTGATGGAAAAGCTACAATTTATCAGT
TTAATACTTTTTGCCAGCCTCAATTTGTCTTGTTTTCTAGCCTTAATTTC
TCAAGTCTGGACGACGCATTAAAAAGTTGGTcgtcaaaaacttttcattg
gtaaaaagtgacaaatttattataaaatataaatttttccgACTGATTGT
TTTTGCCGACGAAACTTTCCCTGATGAATTGTCTAACTGATTCTTGGTAA
CTGATCAACGATTTCATTTCCTTCATGCAGGTCTTCAGAGCTACTTCAAC
AATCATATCGAAGGACCAAATCCACCCAATGGAGTCCATGGACCAATCAA
CACACGTGCTGAATTGAGATCTTATGACCCAGGACTCTATAATTTAATCA
AAGAATTATACCCGTGTGGAAACACTTATCATTGGTGCAAAGGTAGTGCT
TCTTGCATCTgcttatacagggtgtccctaaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNaagcctgtgtgatggagaacgttcttatattttagcgataacacacac
aaacttttctactcaatcgcatgttcaaactcgatactttaattagggac
accctttATAGCTTCTTGTACATATTACTTCTATTAAACGCCCCCTgcta
aacgccccctcgaataaacgcctttcttgccttaaaattttttttctctc
caaTAAACACCCTTCCtgatacgtcacttgcaaccaatcagttgttgggt
ccgtggaagatattgcaatggtgGTAACGTATAGCTTCTTATTTTGAGTt
tagttgactctctctaattcgaactcgagcagaaaatcttattttttcga
attacagggAGGTTCGAATTGTAGAGAGTATATTAAGTGGGTTTCTCATT
GACAGGGACTTGGAATaagatcgaattatagagagaatATTGAAAGGGTT
TCTTTTTTACGGGAGGCGGGAATAAGATCGAATtctagaaagattcgaat
aatagaggtttgAATAAAGCGAAATTCTACTGCACATTGCTTTGTGGCCT
TTTACTCTGCAATTGGTCAAAAGTATCATCACCCTAATCAAAAGTTTGGA
ATAACGTTTCTATAACTCATCCAGTACTATTGGAAATTAGAATTTAAGGG
TTTTTTCAAAGACAAAGACAAAGACGCGGTACGCCTACTGAAGTCTCCAT
AATTTAAACATGGATgggaaacacaaatttgttcgagttgaTAAAActtt
gagttatggagtaaagtttTACAAAGTGcttgttaactgaaggaacgAAA
AAACTTGCCCGAGTATATAAAGAGGACAATTGAGTCACAGAGGTTCAAGT
TAAAGAGACTTTCGTGGATAGCTTTTTTGTCAATGAGTCAACAATATCTA
TTTGGAAATTCTTGATATACATAAGTCAAGATCACGTCATATTTCTTGAC
ATGAGCACCCAAAATAAAACGGATTTTGACCACCGTGTTGCTATTGCCAG
TAACAGAGAGGGGTCGAATCCCGGATTTTTCGGGTGTTCTCCATAAGAAA
ATGACTTAAGCATACTAAGAATACATCATTGTTATTTTACATGACCATAG
AATACATCATTATTAATTCGCCATAGAAAATGCTGCTGGATCGAACCTCC
GTATGAACTGTGATGGAACAGGACCAATTATTACTCAAGCACCACAAACC
AAAGCACCAACAGATGCTCCTAAACCACAGACCACGGAAGATCCGATCCC
TCCAATTCCTGACACTACACAGCCTCCTCCAAGTAAGTGCCGCATCTTGA
TAGGCTACCTAAGGTCTGCGGGCGTAAGTATTCTGAagctcgggtgaaac
aaggcatgtcccaaatatattttgcctgacgcgcaccgcttccaatgatt
ccttaacgttcatatatagctcaaaagaatcatatcGACGAGTGGATTTC
GAAAAATGCTTGGTCAAGAATTtgcattaagccaatctcaagataccggt
caaaaaatgattttgacgttataaaatacaacgaaaaaacacgtcataag
taagattcaaatgacgtcattattgaaaaacagcgataacttcaatttta
ttaatgcAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAtcg
ccttttttcaataatgacgtcatttaaattgtctttttgacgtgtttttt
cgatgtattttataacgtcaaaatcagtttttggccgatatcttgacatt
ggcttgatgtaaatttttgacccagcacttttcgaaatcctctcgttggt
acgattcttttgagctatatatgaaagttaatggataatgggaagcggtg
tgcgtcacgcaaaatatatttgggacatgccttgtttcacccgagagAAA
ACCAAACTGCATAAAATACTTAAATTCTTTTTGCTAACCTTGTCTTAGTT
TTATCgagtaaatcactaaaaattagaTGTACGATGTAAGGTGTGTTGAT
TTACGTTCGATCAATAATTTATTTCTGAACTATTttaaatacagtggagt
ctccataactcaaactcGAACTGAAAGTACACGTTTGTTCATGTTAATGA
AGTTTCGAGTTATATATATGACTAACCCAAAAGACTAGCCCATCTTTAGA
ATCTAACGGTGCATTTAAGGACCCTTAAGGTTAAAGACTGCACCTAACGG
TCAGTAACTGACCTTAAACCCTTCTCCCCCATTCTTAGGTTTTACAAATT
ACTTTAAActtgtattttcaatttttaggttGCAAAGACCACAACCGTTA
TTGTGCAGCATGGTCAAAATATGGTTATTGTGATTCAAATGGTTACGTTA
AGAAATATTGTAAACTTTCATGTAACACGTGCTAAGCAAGCATTTGAATC
CGCTGAAATGAGTGGATTATATATACAGTNCAGCATGGTCAAAGTATGGT
TACTGTGGTTCGAATGGTTACGTTAAGAAATATTGTAAACTTTCATGTAA
CACGTGCTAAGCAAGCATTTGAATCTGTTGAAATGAGTGGATTATATAAA
TTGTTGACACTTTATTATTCAGCATTCTCCAATTCGATACACGCTCCATt
atcgataatattgaaattcacCGTCAACGAGAACTCTCATAAACAATGTT
ctattattcgatgaaaatatgatatcctttgaaaatcgaattcaaaattt
tgaaactgaaactTAAAAAACAGTGTTCATAAATTTTgactttattattt
tgtttaagATTATACCTCTATATTATTTGAGAGAGTTAAATTTTGTACAg
agatttttcatttattttaccAAGAAAACATGTTATAATAAATTTCACTT
CTTCTAAGTAGTTTTCACATCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_017305XLOC_017305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00030232-exon-sc0000802-1491911889:99619..99835TCONS_00030232-exon-sc0000802-1491911889:99619..99835Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:99619..99835TCONS_00030232-exon-sc0000802-1510915933:99619..99835Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:99619..99835TCONS_00030232-exon-sc0000802-1575043694:99619..99835Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:109494..109538TCONS_00030232-exon-sc0000802-1491911889:109494..109538Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:109494..109538TCONS_00030232-exon-sc0000802-1510915933:109494..109538Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:109494..109538TCONS_00030232-exon-sc0000802-1575043694:109494..109538Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:110152..110293TCONS_00030232-exon-sc0000802-1491911889:110152..110293Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:110152..110293TCONS_00030232-exon-sc0000802-1510915933:110152..110293Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:110152..110293TCONS_00030232-exon-sc0000802-1575043694:110152..110293Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:111338..111522TCONS_00030232-exon-sc0000802-1491911889:111338..111522Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:111338..111522TCONS_00030232-exon-sc0000802-1510915933:111338..111522Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:111338..111522TCONS_00030232-exon-sc0000802-1575043694:111338..111522Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:111878..112059TCONS_00030232-exon-sc0000802-1491911889:111878..112059Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:111878..112059TCONS_00030232-exon-sc0000802-1510915933:111878..112059Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:111878..112059TCONS_00030232-exon-sc0000802-1575043694:111878..112059Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:113356..113485TCONS_00030232-exon-sc0000802-1491911889:113356..113485Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:113356..113485TCONS_00030232-exon-sc0000802-1510915933:113356..113485Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:113356..113485TCONS_00030232-exon-sc0000802-1575043694:113356..113485Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:114399..114560TCONS_00030232-exon-sc0000802-1491911889:114399..114560Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:114399..114560TCONS_00030232-exon-sc0000802-1510915933:114399..114560Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:114399..114560TCONS_00030232-exon-sc0000802-1575043694:114399..114560Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:115995..116150TCONS_00030232-exon-sc0000802-1491911889:115995..116150Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:115995..116150TCONS_00030232-exon-sc0000802-1510915933:115995..116150Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:115995..116150TCONS_00030232-exon-sc0000802-1575043694:115995..116150Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1491911889:118097..118693TCONS_00030232-exon-sc0000802-1491911889:118097..118693Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1510915933:118097..118693TCONS_00030232-exon-sc0000802-1510915933:118097..118693Clytia hemisphaericaexon
TCONS_00030232-exon-sc0000802-1575043694:118097..118693TCONS_00030232-exon-sc0000802-1575043694:118097..118693Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000802supercontigsc0000802:99619..118693 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.521427	0.577135	0.240537	0.404228	101.417	77.1982	200.475	236.777	122.698	138.077	217.851	160.036	38.9075	35.9487	8.68546	4.14259	16.9048	27.6249	73.6206	126.901	117.56	116.017	61.1389	92.1235	177.91	178.934	57.386	52.2283	572.978	685.238
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00030232 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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