|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00030109 ID=TCONS_00030109|Name=TCONS_00030109|organism=Clytia hemisphaerica|type=transcript|length=1541bp
TTTTGACTTATTTTGGAAACTTCCGATCTCGAAAACGAAAGCTAAAGTTA
ACATAGGTAGTGGTCAGTTTCTCTATGGAGCAACATACAAGCTCTCCAAA
TTTTTTGTAAAGGTAAGTGAGTTCGCAGAAAAACAACATTCCGATGTGAA
AAAATCTTCGAACTTACTAAAATCCTAACCGATTGAGAACCGATGTAAAC
AAATCTGAAAACGGAGTTGACCTTATCGTCATCGACAACCAAACAACTGC
AAAAATGGAGGACGGTGGCGGTGGTGAAAATGTGACATCATGGCTGTAGA
AATTATTGACAAATCCAAATCTGGTGAGTCTGACACTGATGCGAATAACA
ATGAAAGGAACCAAACTCTGGGTGCCTTTCAGAAGCTCACTAGGGACCTA
GTTGAAGATGAGAGACTGGTCAAAGAATTCACTCTTGGAAAACGAATTGG
ATTTTACCGAATGCGTGGTGATCTTGGAAGTGGCAACTTTGCCAAAGTTA
AGCTAGGGTATCATTGCCTAACAAAAGAGAAAGTTGCCATCAAGATCCTT
GACAAGAACAAACTAGATGACAAAACGCAGAAAATGTTAAGCCGTGAAAT
ATCGTGTATGGAGAAATTACAACACCCAAATCTGATACGAATGTTTGAAG
TTTTAGAGACAGTAGACAATTTATATATGGTTTTAGAATATGCATCATGT
GGTGAACTTTTCCACAAGATTGTTAACCAAGGCAAATTTTCGGAATCAAT
ATCTAGAAGTTATTTTTCACAACTCCTTTCAGCTGTACAACACATGCACC
AACGTAACATAGTCCACCGAGACATCAAAGCTGAGAACGTTTTCTTACAC
ATTAACGGAACTTTAAAACTAGGAGATCTTGGTTTCAGTACTATCGTTTC
ATCAGTAGAACAACAGCTTAATACATTTTGTGGCAGTCCGCCCTATGCAG
CGCCCGAACTCTTCAAAGATGATTATTACTATGGTAATAGTGTCGATGTA
TGGGCGTTGGGCGTTTTACTATTCTTCATGGTTACTGGTACGATGCCATT
TAGGGCGGATACCGTTGGCAAACTAAAGCGTAAGATTCTAGAAGGAGTTT
TTCACGTTCCAGATTACGTTAGTGAACCTTGTAAGTTTTTGATTTGCCAG
ATTTTAAGACCTGTTCCTGGTGATAGATTTACGATTCCAGAAATCATGAG
AAATGTATGGTTGGAAGGTGCGTCTTATCCTAAACAGTTAACATCATCAC
TTATGAAACCTAGCCTGGATCAAAACGCATGTTTAACTGACGAAGAAACA
GAAGCTATGAAACAAGTCAAATCATATGGAATTACCGATGAAATGATTAC
TGAATGCCCGGATACTTCTCGGAACAATATTAACGGTATTTTCCGTCTTT
CCGTATACCAAGCTCAGAAACGGAAATTGGAACGGCAACGAGAGAAAGAG
TTACAGTTgaaacaacaacaagaagaactacggaaatcgaaaaataacaa
aaccGGAAAACCGTCAGCTTCGAACGGCGGTAAACATCAGC Run BLAST on NCBI transcript from alignment at sc0000794:31377..43725- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00030109 ID=TCONS_00030109|Name=TCONS_00030109|organism=Clytia hemisphaerica|type=transcript|length=12349bp|location=Sequence derived from alignment at sc0000794:31377..43725- (Clytia hemisphaerica)
TTTTGACTTATTTTGGAAACTTCCGATCTCGAAAACGAAAGCTAAAGTTA
ACATAGGTAGTGGTCAGTTTCTCTATGGAGCAACATACAAGCTCTCCAAA
TTTTTTGTAAAGGTAAGTGAGTTCGCAGAAAAACAACATTCCGATGTGAA
AAAATCTTCGAACTTACTAAAATCCTAACCGATTGAGAACCGATGTAAAC
AAATCTGAAAACGGAGTTGACCTTATCGTCATCGACAACCAAACAACTGC
AAAAATGGAGGACGGTGGCGGTGGTGAAAATGTGACATCATGGCTGTAGA
AATTATTGACAAATCCAAATCTGGTGAGTCTGACACTGATGCGAATAACA
ATGAAAGGAACCAAACTCTGGGTGCCTTTCAGAAGCTCACTAGGGACCTA
GTTGAAGATGAGAGACTGGTCAAAGAATTCACTCTTGGAAAACGAATTGG
ATTTTACCGAATGCGTGGTGATCTTGGAAGTGGCAACTTTGCCAAAGTTA
AGCTAGGGTATCATTGCCTAACAAAAGGTAATGAACATATGATTAGATTT
ATTCATGATTTAAAAGGGGGCGCTGTATGTTAACCTTTAAAATATCCCAC
ATAATTTCTGTCACACAGTACAGACACACACAGGGTACCCTTCTTTTTAG
AAACCATCCTGCCCTGGCTGACACACCGTCAACTTTCTGGTCTTTTTGTC
AGGTGCAAATTAATATTGAATTACTCCGGACAAAACTGACTTTTCTCTTT
AGTATTTTAGTGTGCACTAGACGCAATAGACTAAAATAACGTTCAGTTCC
CTGTTTGGATGTTTGCAGTTTGGAAGTAAAAAGTCATTTGACACTGGATG
ATATACATTTGCCTGGTGCTTTCCTAAGTCCATTATCTCAACAAAGTAGT
CTTTATGTTGGACAGTGAAAAAGAATGCGGCTATTATATTTTGATTTTTC
CCGAAATGTTTCGGACTCGGTCCGTTCTCAAGGTAATGATATTTCTATAG
AAAAAAAAGTGTTTTTATTCAAAATTATTTGACGTCGAATTGGACTAATA
CGTCATTTAAGGCGATTTCGGCTTGAAAATGGGTTGGTGTAAATGAGGCC
ATCTGAAAAGTTGAATTTAGTCTAAAATGAACGTGTAAATCAGACTTAGG
CGCTCGGTTGGAGAAGATTGAGTTCTTGGTTCAATCCATGAGGTGTGAGG
GTTCTCAGTTCTTTGATCCAGAAGTTTTCTCTTTGTAGTATTATCCTTTT
CATTCTTTCTATATCTGTCTCGTTGATCTGTTCAATGATGGTGAACTTTG
CGTCTCTATTGAAATCGTGTGGTTTGGTGGAAATGTTTACACGCTGGGAT
TGTCTCTTGTCGTGGTCTGTATCCAGACGGTGACAATCGAACAACTTCGA
ACAAAAATTGCAATCGAACCGATCGAACGTAATCGAATGCAATCGAATAA
TTGCGATTTGATTGTCAAACATAATCGAATCTCAATCGAACGGCCGATTC
CTGGGTAATATTCGATTGGTTCGATTGATTGTTGACTATGTTCGATTGGT
TCGATTGATTGTCAATTACATTGGATTAATCTTCCATTTCGTTCGATTAC
GATTATGTTCGATGAGTTTGATTGTGATTAAATTAAATTGGATCACTCTG
TTAGAGCTTCTTAGCGTGGGCGGCTGAGCGCTTAAGTACCATACTAAAGC
GAATAAAATCTAATACAATTGAATCAATCGAACGTAATCGAATACAATCG
AACGTAATCGAACAGCAAATCCTGGGTAATATTCGATTGCAATTCGATTG
CATTCGACAATCGAATTGCAATTATTCGATTGCGTTCAATTTCGTTCGAT
TGACACCGTCTGGCTGTATGCATTACTTCTATGGTTATTGAGTCTTTGAT
TGAATTGGGTCTCGCTTTTTCCGATATATTGGATGTGACATTTGTTGCAT
TCCAGGTGGTAGATGATGCGAGTGCTTTTGCACTTAACGTTGTGGAAGAT
CTGGTATGTCCTTTTGGTTTGTTGGCTGGTGAAGGTTGAGGTTGACATTG
TTTGTTTACAGCAAAGGTTTCCTGTCCTTGTTAAGCAAGGCTGGCACTTT
CCTTTCAGTTTTAATTGTTTTCTTGAGACTTTGTTATTGGATATTGATGT
TTGTCCAAGTAGATCTTTCAAGTTTTTGTTGCGTCTATACGCAATGACTG
GTATTTGTTGGAAGGTATCTTGAAACCGTTCGTTGATGTTTAGGATATCC
CAGTGCTTTTCCAGTAAGGTACGGATAGGTGGTAATTTTTTTGTAAAGGT
AGTGATGAAGGTGATTTGTTGTTTATTCTTGGTGTTGTTGTATTTTAGGA
GATCTTCCCGGTTCTTATTCTTAACTTTTTATGGAGGTTTACAGCTTTGT
ATCCTCATCTGATGAATGCTCCTTTCATTTGGAGGAGGGATTGGTTGTAT
TCTTCGGGGTTAGAGCAAATCTTTTTTATCCTTAGTGCTTGCTTACAATG
GCCCATTTGCAGGTGCGGAATTATTTTTACCTTAGCGTATAATCAAGACC
TAACAAATTGAAGCGCTTTCTCGGGAATTGAATGACAAAATTTTGTTGGT
TGATTGGCTGCTGCACGTTTAGCAATCACTCATTTTTTTTCATTTCAAAT
CTTAATTAATTGTCTTGGGATCTTGAACTTGATTCAGGTAACTCTCATCC
TTGTTGTTTTTTTCTGAAAGCTTGATTTCCTATGTGACTAACTATTTGCA
ATGTTAGCTTTTTTAGTTTTATGCAAATACTCTTAGGTTTCAAATAAACG
GGCCCCCCCGCTTGTTAATTTTTCGAAAATTTTCCAACCCCCCCGGACCT
TATTAGGACCCCCCCGTTTATTAATCTCTAAGAATATTNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCC
CCCCCCCCCGGCAATAAGGTCCCCCCTGTTTATCAAAATCTCTAAAAAAT
TTCCAACACCTCCCCCCCTGGAACCTAAGAGTAAATGAATAAATAGAAAT
GTCAATTGCTAAAAAAGGAAATGTATATTATTTTATGCCTATTCCTGAAG
AAGTGTGTTGGAATCAGATGAGGAATGTCTATTATATTATTAGACCAACA
TGCTGTAAAATAATCAGAATCACAGATTGAAAAAGATTCTTTCCTCTCTA
GGCAATTACTTTTTTATTTTCTGGTTTACGGACATTTGGAGATGATCTTT
TGGACCGGAGGATGGAAAAAATATAAAAATAAAATTGCTCTTTTCAAACT
TTAATGTTGTAAAAAATTAAAAAATATGTTTCGAGAAAACTTACATACGT
TAAAGAACTTTTTTAGTAAGAAAATTGTGTTTAAAGTTATTAAAGGCCTG
GACACTGACCCTTTTACTTGCCCTTCTTGCTTTTTATGGCTGTTCAGTAC
AAGGTCGGAAGAGCATAAATAAATAAAATATTTGTAAAATCCAATTTTAT
TTTTATTTTATTTTTGCAAAAAAAACGTCGGCGATTCCAAACCATGGTTA
CGCCTCCTCAGTCACTGTAAATAAACAATTGGTTTTTCTTCTAACTCTTT
ATTCTACAGTTGGAAGACTAGGAAGCTTGAGTATTTCTTTTTGTGGTATT
GTTCTCGAGAGGGAGATAGGAATTTAACTGTGGAAGTAATTCCCCAGGCA
CCAAAAGCGAATAAATTTTATTTGCTGTCCTCTATTTTTCTTTCACCTAC
CACTCTGAAAAAAAACTAAATTCCTGTAAAATGCCATGTCAACTGAGTAT
CAAAAAACCTTGAAAAGTGCCAAAGTTTTTGCCAAAAAACCTTGAAAAAC
CACTTAAAAATGACCAAAAAAACCTTGAAAACCTTGAAAATCCCGAAAAA
AAATCCGTAGACACCCTGAATATAGATTCAATCAGATTCTCAAACTTTTC
TGTTATACGTGTATGACATTAGACCAACTTATAACTTTAAAGGTACTCTA
GATACAGATGATATTTGCTGATATGGAATAGAATTGGAATTTGTGTTTAC
CATAACGACCTGTGTGTCTGGAAAAATCTGCTGCATCAAGTTGCTGCCGT
TTTCTTTTTTTTCCTTTATCTTTATCTTTTATCCTATCTTTTATTGATTT
AGAAAATTAAAAACCAGAAATTCATTACGTAGGTTAGTTCTAACTAAGGC
CTGGTTAACTGATGATCACAAGAAAGCAGAACTTGTGATTAAAAACCATA
CTTTTCACAAAAATATACAGTAGACAGTAACATTGAAATTAGAGCAAGTG
GAGGTGTAGTATTGTATGAGCAAGACTGCATTGCACTGTTGTTGTTGTTT
TGAAACTAAAAATTATTCTATTATTTGAATTTGACTATACTGACTGGTAT
TTTCAATTTTTGAATATTTTCAAAAAAAAAAGATTTTTTGTCCAGCTATC
TGATGAAATTCAAAGCAGTTTTGCATAAAATTTAGCAGGAAAATATACTT
TAGACGTACAAACTTTTGTGAACAGAAACTTTAGCGATTTTCTCAAATGT
CAGGACCTTTCACAAAAATAAATGTCTTTGAAAGTTCTTGAAGGGGCCTT
TGGCAAAAGTTTAAGTTTGTGAAAAATTCTTGACATTAATAGAAAATCTG
TAAAAATGCTAACCTAAAATTTAGCCTGATAATTCAAGTTTTTTTGTTTT
GATCTTTCAGAGAAAGTTGCCATCAAGATCCTTGACAAGAACAAACTAGA
TGACAAAACGCAGAAAATGTTAAGCCGTGAAATATCGTGTATGGAGAAAT
TACAACACCCAAATCTGATACGAATGTTTGAAGTTTTAGAGACAGTAGAC
AATTTATATATGGTTTTAGAATATGCATCATGTGGTGAACTTTTCCACAA
GATTGTTAACCAAGGCAAATTTTCGGAATCAATATCTAGAAGTTATTTTT
CACAACTCCTTTCAGCTGTACAACACATGGTAAGATTATATATACTGTCA
TTTTTATTGTTTNTTCAGCTGTACAACACATGGTAAGGTTATATATACTG
TTATTTTTATTGTTTCATTTCTTTATATTCGGACGTTTTTTTGTCATTTC
CAAGGAGATCATCGTGTGAAGCTCAATCTTTGACTTTGCATTTTTTCTAA
CATGTTTTCTATATCGAAAATCAATAAAGAAGATATTCACAACTCGAGTG
GAATTATGCAAGAAAAGGGTCCAACAGCTATTTTTCCAAGTGGAATAACC
AAGAATAACTCTAGTTTGATTGAGAAATTGGCCATATCTGTTTAATAATT
TTTACAGTATATATCNGGAATAACTCGAGTTTGATTGAGAAATTGACCAT
ATCTGTTTAATAATTTTTACAGTATATATCGATTTTCAAGAGCTTTCTAG
CGGTATTGAAGGATTGAGATTTCGAATTTTTAGGGTCCTTCGGATTTTGG
ATGTTACTTGTAAAAAAATATCTGTCTGTGTCTGTAAATATCTGCCGAAG
GTGTGTATATTTTCTTAATCATTATGCACTTGCTGACAGATGGTATATAA
TTCATCTTTACCTAAATTTTCCACCTGTCTTCAAATTTCCAAGGACTAGC
ACTTGTTTCGACGAACACAAATTGTGGTGGATTTATTTTTGATTTAAATA
TTATGATTTCTTAATCTTAAAATTATGTTTGAATCAGTATATTTAATTCA
ATTTAGATTTACATTGGTTTTGGGCCCCTTTGCTTTGTCACAGTTAGACC
TTTTTTAGTTCCTTTTTCTAAAAAAATCATTTCTCACCCAGACAAGAATT
GTGAAATATTGTTACAAATTTTCTACTATATAGAAACATAGAAAAAACCA
CCCTTTTCTCAATTCCTTTTTACATTTATTTTTTTCTTTTCTAAACCTGA
CTGTTTTCAATAATCTTCTTTCTTTAGAAAATTGTTCATCATGTTTTCAT
GTACGCGTTGTCAAATATATTTTCGGTGACATATTCCCTTCTTTAGGCCA
GAAGCCTCTATCTGATTTAAAATCTGTAGAAGGACTTTTTTATGCCCATC
CCACTAATTCAGATTTAACCATATCAATAGGATCACGACCTATTATGGTA
AATAATATAAATTTTTCTAAAAAAGATGGGTACGTGGCTTTCACGATACC
TGAGTAATCACTTAAACAACTTTGTTGCTCGTATTCAAATCAATTTTAGT
GCAACTTATTCCCCTGGGGGGGGGGGTACTTAGGCAAATGGAGGGTACGG
TATGTGCCGCCCTTAAGGGTACCTTTTCTGATTTCCAAAGTCCCGCTAAG
GGTCGGAAGAATTAGAAAATCAAATTTCAGTCCCAGTAAGGGTCGGAGAA
ATAGGAAAATTTGAACTTTTTACCCCCGAGAGATCGAAGTTTGGTCAAAT
TTGTTCCAATAAGGGTCGTAAAATTCACAACATTTTCCTTTGTTTTCTCC
TTTTTAGTCCCAGTAAGGGTCGAAAGTCGGGCGGCACCCCCTCCCCGTCA
GTTCGCAACACTAGTACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTATTCCTAATTGAATGTCTTCGCGGTTAAGTCTTTTTCACAAAAG
AAGAATTGAAGCTCCTCAAAAGCTCAAAGTGATGGATAATCACCCTATCT
ATAAATCTTTTGGAGACAAGCATTGCCCGTAAAGTAATTGTTAAAAAAGC
TCGTACAAGATACGGTAGTGATTATCTTAGAATTATGCCGATGAATTCAA
TACTACGTGAATATTTTCAGGAAAATTGCCATCTTAATTATGCTTTTTGT
GTCATAACAAAACAAAAAAGGATTAGAAATTAGGAAATGTTGTAAGAAAA
TCCTACCTTAATGTTGGGAAATATCTTATTGAAATTTAATATCCTGGAGG
CGTTTAGAATTCACTTTTGTTTTTGATAAAATTTTTAGATTCTATGTGAT
TTTACATTCGTGTGATAACGAGAAATTAATGAATAAGTCTTTTTGGATTT
TCTTTGCGAAGATTTCATGTAATTCTACTTACTGAGAAAGTAGGTTCACA
CAGCCAGGCTAAAATCTTTCAAAAGAGCCCTTAAATATTACCGTTAATAG
GTTTTTTCTCAAAGCAGAGTTTTTGATGGATCAGTAGATGTTTTCTCTTA
GACTACCAGTGCGCTGTGACTCATTATAAATATGGCATAATTAATGCCCT
AAAGATTAACGAAAGGTCATAATGAGACGTGGGGGTAAAAGGAAGAAAAT
TTTGTTGTTTATTTATTTATTTTTCAAGATTTTCTTTTCTCCCATATTAA
CCAAACCGGTGAAAATTGAATATCTTAGCAACCCTTTGAAACCGACAATC
CACAAATAGTGAATCATTGCTATAAACATTTCCATTTCTCATAAATTTTT
GATGAAAAGCAACCCAGAGGTTTTTTTAAGACAATCATTTCATTGGCTAT
TTACAAGATCTTACAGTTTTGCTTATCCAATCGGATTTGTTCTTTTTACA
AACTTCAACTCTAATTATTTTTGCTTGACATTTATTTTTCTAATTCTATT
GATTTTTGCTTGTCGAGATTCTTTTAATCTCGGGTAAGTTATGGCATGTC
TGAAAATTACCATAATTTTTAGATCGCATTAGCCGACAGAAAGTGACCAA
ACAAATGACTGAACATAATGGGTACTATGATGTAGTTTCTAACCTGATGT
GTAACCTAATTGTTTTTTCACTGATTTTCGCGAAAAATCGCAAAAACTGA
TTATTACGTCATAATCGATGACGTCATCAAAACTAAAAATTGAATTTCTC
AAGAATTGTTAATCCAATTGTCTTCAAACTTTTACCAAAGATGTATCTCA
CCAAAGTCGATCTTTTNGGATAATCCAATTGTCTTCAAACTTTTACCAAA
GATGTATCTCACCAAAGTCGATCTTTTGGAAAAAAACTTTTTCGAAATTT
TGATGACATCAGCAGAAATTAGTAAAAAACGAAAAATTCTACTTTTTGCT
GAGGTAATCAGAATTTTGAAAAAAATATTTTTTCAAATGTTTGACTTTAG
TGAGATGCATCTTTGGTGAAAATTTGAGGACAATTGGATGAACCATTCTC
GAGAAATTCAATTTTCAGTTTTGATGACGTCATCGATTATGACGCAATAA
TCAGTTTTTGCGGTTTTTCGCGCAAATTAGCGAAAAAACAATTAGGTTAC
ACATCAGGTTAGAAACTACATTATAGTACCCTTCATGTTCATTCATTTGT
TTGGTCATTTTCTGTCGACTAATGCGATCTAAAAATTATGGTAATTTTCA
TTTTTTGAGACATGCCATAACTTACCCGAGATTATTGATCCTTGTGAGAT
AGAGGTCATTTCGTCGATTGTTCATTTCTTATCTACACACGCTTATCATC
TTTCAATAATTATGGGTCGAAAATTCGTCGCCAAAAAGTGACGAAAAATC
AATCGCCAACGAATATTTTTTTGCCGGTGAATGTTTTTTTACCAAGCGGT
CATTTTCTACCGACAATTAATTTTTTCCGACCAATTTTTTTCTACATTAT
TTTTGAATACTTTAAATTTAGAATTGAATACATTAGCGCTTTATTTCGGG
TTTATGTGCCACCTAGGCGAGACCAATTTAATTTATTGTTCTACGGGAAG
ACCTTCAGAAAAATGTGAGTCGGTCGGTCGGTATAATCTACATAAATTTC
TTAAAATCTAGGGTCGGAAAGTCAAGATCTAAAGAATGTTTCTTGAAACG
GTACACTTTTTCCCTATCATCAATGAGTGACTTTCGTGCTGTTTCCGTTG
TGATATTTTAAATTCATCTAAGCTCTGAGATGAATTTAAATTCTTCAACT
TGTTGTCCACCAATCATTGTCCAACTTTTCAAATTTGATATTATTATTTT
TTCGATTTCTGAAAAAGCAGCATCAGTCGGGCCCGTAGAACAATAGATTA
GTTTATGTGCCACTTACAACAAAGAATAATTACTCAGTTTATCGGTGTTT
TCCAGCCTTAATTAGCGAATTTATGTATTTGCACTTTTAAGGACTGTAGA
GTGACTGAAGAGATTCGGAATAACCTGCAGTTTTGACCCGCAAAATCGAG
GACGGTAAAATAGCTGATTTGCCGTCGTTCTCAGCTGGTCAGGATCTAGT
CCAATTAGAAACTTACCGTGTCCGTCGCAGAAAAATACACAACATACATA
AACACACTATTTCCTCTAAAAAACCGCCGTAACTCTGGTAAAAGATTCGT
CGATAGTAAAGAGCAACGAAATTATTAGCAAGTGACGAAATCTTTTACTG
ACTACTTTTCTACTGATGAGTTCTCTTTTCTTAGGTACCTAATTTAATGA
AATATTCCTCTGTTGCAATGCAAGGCAATCTCTGCTCGATCTCGCTGAGC
CCTTCGGGACGAGATGGAGTTTTTACAAGCTCTTATTTGATTTGGTAACC
AGTAATAAAACAATTATATAACTTTTTCTAAAGAACACGTCATTTTTATT
ACTCCAAATGACCAATTATTAAAGTATCTTATAAAAACTCCATCTCATCT
GGACCCTTTTTACTTCTGTTGCCATTTGACATGTTCATAAAATTCTTGCA
ACCGCAGTTGTAAGCGCCCGAAGGCTCCTCCTTCGATAGCTATCTACCCT
AAAAATTGTTCCACTTTCACTTGATCCTTTTCAGTAATCGCTGAGCATTT
AGCAGAGAGCCCCTGAGTTTCTGTTATGACCCGACCAAGCATTGAACCCA
CAATCTTTCGCACCTAGCGCTCTACCTTCTATGGTTCGCTGACTATATTC
ACGTAGGCTATGCTATAGTCTAAGACGAGTTTCATCTAAGAGGAACAAAC
GTGAAGACGGGAATTTTTTACGGGAGTTGCTGTTGTCAACAGACTCTATC
CGCCGCGAAACATATTACGTTTTATAATAGACAAACCATGTTATATCATA
ATAATACATTATACGGACGATAACATCGTCTAATATTCACGTTGATGAAA
GCTTTACCATAGTCATTATAAAAAAACCCGGTCTGACAATGTATTGTTTT
AGCTTTTTGTTCAATTTTATTTTGTTACAAACAAAAGACAAGTTACAATT
TGCATACTTTCTGATCACGTTACGAAAATCTTCTCTTGGGATTGGTCAAT
TTTCTAATCACATGATCGAAAAGTTTGCAAAATAAATCGATTGTGGTACG
TAAGCTCTATCTTTTAACAATAAAAAGAGACAACAACCTTCCAGACCAGT
GTTTTTATAATAACTATGGCTTTCATTTCTAAGACCATGTTCAGAAGTTA
CGGTTCCGTATCGAGCCGAAACGAAACTATCGAAATAGATCGAAACTGTT
TCGCTCGCTCCACTTTTTTTCATCGGAACGGAAATCTTCCGTTTTCTTGC
TCCTAAACGTTCCAGAACCAATATGAACACTCTCGATCCGTAACGAAAAC
CATACCGGAGCGATACGAAACTGTAACGTCTGAACATGGTTTAAATCAAT
AAATTATGCTTTCGTTCAATTTATCCATGAAGCCAAGGAGGCTCATTGAT
GCTTTATTTTAATCGTCTACAAAACAATTGGAACCTACTAGTATCAACTT
TGGAATCAATTTGCGATGAAGTTATCATAAATGTTAAGAATTATCTATAT
CTATATAAAACCACCTTTAGCTCTAGTTTGGCACCCTAAGCGTTACCAAA
TTTCTTTATTAAAAAAGTGTTTGCTCTTTGGAAGAGTTTTTACTTTCTTT
TTATATAATTTAGTAAATCATTGCTCCATTCTTTTCTCCATAGCACCAAC
GTAACATAGTCCACCGAGACATCAAAGCTGAGAACGTTTTCTTACACATT
AACGGAACTTTAAAACTAGGAGATCTTGGTTTCAGTACTATCGTTTCATC
AGTAGAACAACAGCTTAATACATTTTGTGGCAGTCCGCCCTATGCAGCGC
CCGAACTCTTCAAAGATGATTATTACTATGGTAATAGTGTCGATGTATGG
GCGTTGGGCGTTTTACTATTCTTCATGGTTACTGGTACGATGCCATTTAG
GGCGGATACCGTTGGCAAACTAAAGCGTAAGATTCTAGAAGGAGTTTTTC
ACGTTCCAGATTACGTTAGTGAACCTTGTAAGTTTTTGATTTGCCAGATT
TTAAGACCTGTTCCTGGTGATAGATTTACGATTCCAGAAATCATGAGAAA
TGTATGGTTGGAAGGTGCGTCTTATCCTAAACAGTTAACATCATCACTTA
TGAAACCTAGCCTGGATCAAAACGCATGTTTAACTGACGAAGAAACAGAA
GCTATGAAACAAGTCAAATCATATGGAATTACCGATGAAATGATTACTGA
ATGCCCGGATACTTCTCGGAACAATATTAACGGTATTTTCCGTCTTTCCG
TATACCAAGCTCAGAAACGGAAATTGGAACGGCAACGAGAGAAAGAGTTA
CAGTTGAAACAACAACAAGAAGAACTACGGAAATCGAAAAATAACAAAAC
CGGAAAACCGTCAGCTTCGAACGGCGGTAAACATCAGCAATCTAAATTTT
GTGTTGTTCTATGATGAAGATCAATGGTCATTATTATTTTGTTCTCGTTC
TTAAAAAAACCAAAACATCGACACCTAACCTCTACATTATCAACATAATT
TTATTGTGTTTTTTTTATTTAATCTTAATTTATGAAAATATTTCTCTTGC
TTTCTTTTTNCCGGAAAACCGTCAGCTTCAAACGGCGGTAAACATCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00030109-exon-sc0000794-1575043694:43199..43725 | TCONS_00030109-exon-sc0000794-1575043694:43199..43725 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1575043694:38247..38515 | TCONS_00030109-exon-sc0000794-1575043694:38247..38515 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1575043694:31594..32332 | TCONS_00030109-exon-sc0000794-1575043694:31594..32332 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1575043694:31377..31382 | TCONS_00030109-exon-sc0000794-1575043694:31377..31382 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1510915933:43199..43725 | TCONS_00030109-exon-sc0000794-1510915933:43199..43725 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1510915933:38247..38515 | TCONS_00030109-exon-sc0000794-1510915933:38247..38515 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1510915933:31594..32332 | TCONS_00030109-exon-sc0000794-1510915933:31594..32332 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1510915933:31377..31382 | TCONS_00030109-exon-sc0000794-1510915933:31377..31382 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1491911889:43199..43725 | TCONS_00030109-exon-sc0000794-1491911889:43199..43725 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1491911889:38247..38515 | TCONS_00030109-exon-sc0000794-1491911889:38247..38515 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1491911889:31594..32332 | TCONS_00030109-exon-sc0000794-1491911889:31594..32332 | Clytia hemisphaerica | exon |
| TCONS_00030109-exon-sc0000794-1491911889:31377..31382 | TCONS_00030109-exon-sc0000794-1491911889:31377..31382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000794 | supercontig | sc0000794:31377..43725 - |
Blast
BLAST of TCONS_00030109 vs. Swiss-Prot (Human)
Match: NIM1 (Serine/threonine-protein kinase NIM1 OS=Homo sapiens GN=NIM1K PE=1 SV=1) HSP 1 Score: 390.578 bits (1002), Expect = 2.076e-130 Identity = 203/373 (54.42%), Postives = 271/373 (72.65%), Query Frame = 2
Query: 308 DKSKSGESDTDANNNERNQ--TLGAFQKLTRDLVEDERLVKEFTLGKRIGFYRMRGDLGSGNFAKVKLGYHCLTKEKVAXXXXXXXXXXXXTQKMLSREISCMEKLQHPNLIRMFEVLETVDNLYMVLEYASCGELFHKIVNQGKFSESISRSYFSQLLSAVQHMHQRNIVHRDIKAENVFLHINGTLKLGDLGFSTIVSSVEQQLNTFCGSPPYAAPELFKDDYYYGNSVDVWALGVLLFFMVTGTMPFRADTVGKLKRKILEGVFHVPDYVSEPCKFLICQILRPVPGDRFTIPEIMRNVWLEGASYPKQLTSSLMKPS-LDQNACLTDEETEAMKQVKSYGITDEMITECPDT-SRNNINGIFRLSVYQA 1414
D +SG + E Q L F+KLT+D+ +DE++V+E TLGKRIGFYR+RG++GSGNF++VKLG H LTKEKVAIKILDK KLD KTQ++LSREIS MEKL HPN+IR++EV+ET+ L++V+EYA GELF KI +GK SE S+ FSQ++SAV+HMH+ I+HRD+KAENVF N +K+GD GFST VS + LNTFCGSPPYAAPELF+D++Y G VD+WALGVLL+FMVTGTMPFRA+TV KLK+ ILEG + VP +VSEPC LI +L+ +P +R+ I IM + W++G YP L + P L + + L +EE E ++ GIT+E I +R++I G++R+ +++
Sbjct: 23 DSVESGCQTESSKEGEEGQPRQLTPFEKLTQDMSQDEKVVREITLGKRIGFYRIRGEIGSGNFSQVKLGIHSLTKEKVAIKILDKTKLDQKTQRLLSREISSMEKLHHPNIIRLYEVVETLSKLHLVMEYAGGGELFGKISTEGKLSEPESKLIFSQIVSAVKHMHENQIIHRDLKAENVFYTSNTCVKVGDFGFST-VSKKGEMLNTFCGSPPYAAPELFRDEHYIGIYVDIWALGVLLYFMVTGTMPFRAETVAKLKKSILEGTYSVPPHVSEPCHRLIRGVLQQIPTERYGIDCIMNDEWMQGVPYPTPLEPFQLDPKHLSETSTLKEEENEVKSTLEHLGITEEHIRNNQGRDARSSITGVYRIILHRV 394
The following BLAST results are available for this feature:
|
