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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029280 ID=TCONS_00029280|Name=TCONS_00029280|organism=Clytia hemisphaerica|type=transcript|length=1479bp
aataaatcaaaaaaagaaattggaaaaaaagccAGATGTCAGTTTGGTTG
GTGATTTTGAAGTAACATTGAATGATAATCAATTTGAAAATGGCAGATTT
ATAAATGGTGAAAAGATTGTTTTTAAAGATTTACAGACAAATGGACTTGA
GATGGTGGAAGCTTTAGCTTTTGGTGAACATCATGAATGAGATAAAGGAT
GCCACGCTAGACCAAATATATTTGATCTTGAATTGAACAAAGAAGACTTG
AAGAATTATTTGCATAAGTGGCAACAGGACTATGGATGTGAAATTGAACT
ACTTCAATATTGATATTATCTTGAGTAATGAAAAATATCACAATATTGGC
GTTGGCGAGGTTTGATGCTACTGAGCAAATAATTGAATCATCCTTTTATG
TTGGGCTTTGGGAAGGATGGATTTGAACAATATTATTGATGAAGGCGTGT
GTTATTCCAAATCTAAAGTTCCTGATAATTTAGACGTGATGTTGTTAGAG
ATTTGGTGCAGGGGCTTTGTGCTCATTCATTGAAGGTATCACTGAACGAA
TCTCGTCTTTTGTAACGTCTAATATTATGGATACAACTCTCCAAAAGGTA
AGTAAGAAGGCTAAAATATACAACTTTGATTTCTGGGGACGACGCTATGT
ACTTTCTAAATTCCAAtggtttatttttatattttaccaGTGGAAAATGC
TCCATTAAAGAATACATTAACAATTTGGAAAAAGATAAGTTTTCAAAGCT
TTacactttttttgagaaattgtttGAGTTATTCATACCTTATTTTGAGG
AGGTTTGGTCATATTCAAAAGCTGTTGACATTGGAGAGGTCGAAGATGAC
TATGATTTTAAGTCATTAtccaataaaaaaacttttcagtttCAAAAGCC
TAAATAAATTTTCGTGATCAAGAGCTGCAAGTGATTACAAAGATTGTGGA
TTATACTTTACAATAACCTAATTTTTTTGAAGGTTGTTCCGCAACATCTT
ATCTTAAATTATATTtagtttgattaattttttatattcaaaataactat
ttatttagattttttacaGGGACACCCTATGGAGATGACAAGTATCAACT
GAACCATATGCGCGATATTGAGAGTAACATGACATATTAACTACACTTGA
TTATCAAAAAAGCTTATGACTACGCCTTTATATAGTCAATgtaccaaatt
ttgaaaattatgtttGATCAGGTTTCATGTTATTAAAACCTTGATTTAAC
CTTTAACCCCTTTTCTTCAAGCAAACGTCGAGCAAAAATAGAAAGCTTGT
TCGGTCTAGATATGCCGTCAAAGTCCAAATAATTAAAATGAGTGTTCTGG
TATTACTTTTGGACTTTCTTTTGAAGACTGTTGATCAATTTGACAGTTCT
ACTGATCAGTATGTTTCAGTTTTAAATCACCAATACAATATAAAACTTTT
CTATTCTTTACCAGTgtgaaaaatgtata Run BLAST on NCBI transcript from alignment at sc0000735:12617..14095 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029280 ID=TCONS_00029280|Name=TCONS_00029280|organism=Clytia hemisphaerica|type=transcript|length=1479bp|location=Sequence derived from alignment at sc0000735:12617..14095 (Clytia hemisphaerica)
tatacatttttcacACTGGTAAAGAATAGAAAAGTTTTATATTGTATTGG
TGATTTAAAACTGAAACATACTGATCAGTAGAACTGTCAAATTGATCAAC
AGTCTTCAAAAGAAAGTCCAAAAGTAATACCAGAACACTCATTTTAATTA
TTTGGACTTTGACGGCATATCTAGACCGAACAAGCTTTCTATTTTTGCTC
GACGTTTGCTTGAAGAAAAGGGGTTAAAGGTTAAATCAAGGTTTTAATAA
CATGAAACCTGATCaaacataattttcaaaatttggtacATTGACTATAT
AAAGGCGTAGTCATAAGCTTTTTTGATAATCAAGTGTAGTTAATATGTCA
TGTTACTCTCAATATCGCGCATATGGTTCAGTTGATACTTGTCATCTCCA
TAGGGTGTCCCtgtaaaaaatctaaataaatagttattttgaatataaaa
aattaatcaaactaAATATAATTTAAGATAAGATGTTGCGGAACAACCTT
CAAAAAAATTAGGTTATTGTAAAGTATAATCCACAATCTTTGTAATCACT
TGCAGCTCTTGATCACGAAAATTTATTTAGGCTTTTGaaactgaaaagtt
tttttattggaTAATGACTTAAAATCATAGTCATCTTCGACCTCTCCAAT
GTCAACAGCTTTTGAATATGACCAAACCTCCTCAAAATAAGGTATGAATA
ACTCaaacaatttctcaaaaaaagtgtAAAGCTTTGAAAACTTATCTTTT
TCCAAATTGTTAATGTATTCTTTAATGGAGCATTTTCCACtggtaaaata
taaaaataaaccaTTGGAATTTAGAAAGTACATAGCGTCGTCCCCAGAAA
TCAAAGTTGTATATTTTAGCCTTCTTACTTACCTTTTGGAGAGTTGTATC
CATAATATTAGACGTTACAAAAGACGAGATTCGTTCAGTGATACCTTCAA
TGAATGAGCACAAAGCCCCTGCACCAAATCTCTAACAACATCACGTCTAA
ATTATCAGGAACTTTAGATTTGGAATAACACACGCCTTCATCAATAATAT
TGTTCAAATCCATCCTTCCCAAAGCCCAACATAAAAGGATGATTCAATTA
TTTGCTCAGTAGCATCAAACCTCGCCAACGCCAATATTGTGATATTTTTC
ATTACTCAAGATAATATCAATATTGAAGTAGTTCAATTTCACATCCATAG
TCCTGTTGCCACTTATGCAAATAATTCTTCAAGTCTTCTTTGTTCAATTC
AAGATCAAATATATTTGGTCTAGCGTGGCATCCTTTATCTCATTCATGAT
GTTCACCAAAAGCTAAAGCTTCCACCATCTCAAGTCCATTTGTCTGTAAA
TCTTTAAAAACAATCTTTTCACCATTTATAAATCTGCCATTTTCAAATTG
ATTATCATTCAATGTTACTTCAAAATCACCAACCAAACTGACATCTggct
ttttttccaatttctttttttgatttatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029280-exon-sc0000735-1491911889:12617..14095 | TCONS_00029280-exon-sc0000735-1491911889:12617..14095 | Clytia hemisphaerica | exon |
| TCONS_00029280-exon-sc0000735-1510915933:12617..14095 | TCONS_00029280-exon-sc0000735-1510915933:12617..14095 | Clytia hemisphaerica | exon |
| TCONS_00029280-exon-sc0000735-1575043694:12617..14095 | TCONS_00029280-exon-sc0000735-1575043694:12617..14095 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000735 | supercontig | sc0000735:12617..14095 . |
Blast
The following BLAST results are available for this feature:
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