TCONS_00029136 (transcript) - C. hemisphaerica

Overview
NameTCONS_00029136
Unique NameTCONS_00029136
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1301

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00029136 ID=TCONS_00029136|Name=TCONS_00029136|organism=Clytia hemisphaerica|type=transcript|length=1301bp
AAACTACCAGTTTGGGGAGGTTCACTGAATCATTCTGGTCAAACTCTTAT
ATTTTCGGACACTTGCTTGGTAGACAGCTGGATCACTCTTTTGAAAATTG
CCTTTTTGAACTGGCCACATCTTCGTACCCACAAGTCCTTTCCCTCCAAA
ATGCAACAAGTAATGGAACTGGTAGATGCAGACCTTTACGATGAAGTCAA
ACTCAAGTTTGCAGTTTGGAATAGTATACCTCTTGATAAAGGAGCagtta
atttttttggaaatgagcGAGCAATGTTCTTAGATCATTTATTGCCGCAC
GATTTCACAATCGAATCGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGA
TTTGACAGTACGTTGTTCGGGCTACCCAACAATCACTAATGCCTCTCACT
CGCACTTCGCTTTACCTCACACTCAAATCATCATTTGGTTTTTTGAGGAA
GAGTCTGTTCGTCAGTGTGGAAGAAAAATGTTGCACCCTACCAATGATGA
CAATACGTTTTGGCAAACTAATACCGAAACAGGACAACGTTATCCCTTCT
GCAATGGCAGCCGAACTCACTTTCCAAGGACCTACAACGAAATGCCTGCC
CTTGTTGCAGTTTCATTAGATGATGATATCAATGAAACTGGCATTAATAT
GATACCAGTTGGGAGTATCCCAGACAATTTTCAACATGAAAGTAATGGTA
ACAATTTCAATTTTGCTCTGATCGGAATGACCTACGTTAAACTTGCAAAG
AAAGAAGACAACAAAAAGCAACACGTAGACGGCTTCAGAAGAAACCGAGG
CCTTCACTACGTGTGCAAAATCAAGCACAAAGATTCATGGTATCTGTATG
ACGGGTTAAAACCGCACGTGGAGCCCACCCATAAAGAAGCTTCATACGCA
AACTTTCAAATGACCTACCTCCTTTATGtgATACATTCGTCAACAGGATC
TACCAGTGCACATTCATCAACAGGATCAACCAGTGTAACGACTTCCACTG
ACAATGACTGGACCATGACGTTGACTTTGACAATGATTTTTTCAGACGAT
AACTTCATTTTCAGAGTTTGATAAAAACTCGTCCCAACCCCCTGATTTGC
TGATTTCAGCGAACAATGTGCGGTCTGAAAGTTCAAGCAACCTAAAACAC
TTAGCAGGCAACGCGAAGAACCCAATACTtgtCGAAGACGCAGTATCAAC
AGCAAATATTCGAAATATCAACGTACAACAAATGATCAAAGATTTTGGAG
TTTGCACTGATGTACCTAGATGTTTTGATTCCCCTGATTTTTGTTTCACC
A
Run BLAST on NCBI

protein sequence of TCONS_00029136-protein

>TCONS_00029136-protein ID=TCONS_00029136-protein|Name=TCONS_00029136-protein|organism=Clytia hemisphaerica|type=polypeptide|length=356bp
KLPVWGGSLNHSGQTLIFSDTCLVDSWITLLKIAFLNWPHLRTHKSFPSK
MQQVMELVDADLYDEVKLKFAVWNSIPLDKGAVNFFGNERAMFLDHLLPH
DFTIESVCSSEICPQKDLTVRCSGYPTITNASHSHFALPHTQIIIWFFEE
ESVRQCGRKMLHPTNDDNTFWQTNTETGQRYPFCNGSRTHFPRTYNEMPA
LVAVSLDDDINETGINMIPVGSIPDNFQHESNGNNFNFALIGMTYVKLAK
KEDNKKQHVDGFRRNRGLHYVCKIKHKDSWYLYDGLKPHVEPTHKEASYA
NFQMTYLLYVIHSSTGSTSAHSSTGSTSVTTSTDNDWTMTLTLTMIFSDD
NFIFRV
Run BLAST on NCBI

transcript from alignment at sc0000726:7576..13682+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00029136 ID=TCONS_00029136|Name=TCONS_00029136|organism=Clytia hemisphaerica|type=transcript|length=6107bp|location=Sequence derived from alignment at sc0000726:7576..13682+ (Clytia hemisphaerica)
AAACTACCAGTTTGGGGAGGTTCACTGAATCATTCTGGTCAAACTCTTAT
ATTTTCGGACACTTGCTTGGTAGACAGCTGGATCACTCTTTTGAAAATTG
CCTTTTTGAACTGGCCACATCTTCGTACCCACAAGTCCTTTCCCTCCAAA
ATGCAACAAGTAATGGAACTGGTAGATGCAGACCTTTACGATGAAGTCAA
ACTCAAGTTTGCAGTTTGGAATAGTATACCTCTTGATAAAGGAGCagtta
atttttttggaaatgagcGAGCAATGTTCTTAGATCATTTATTGCCGCAC
GATTTCACAATCGAATCGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGA
TTTGACAGTACGTTGTTCGGGCTACCCAACAATCACTAATGCCTCTCACT
CGCACTTCGCTTTACCTCACACTCAAATCATCATTTGGTTTTTTGAGGAA
GAGTCTGTTCGTCAGTGTGGAAGAAAAATGTTGCACCCTACCAATGATGA
CAATACGTTTTGGCAAACTAATACCGAAACAGGGTAAGCTAATGAAATAC
AGTACACTTCTGGTTATTGAAAACTCGAAGCTCCAAGGGAGATGGGAATA
TTTACTTCAAATAACTAAAAATCTCTTTCCTGTTAGATTTTTCACTGGAA
AactatataccttatcggctctTTTTACGCCGGTCAATATTGGCGTACTT
TTTCGTCACTGACTTAATaaaggccggtgtaaaaagggccgataaggcaG
CAGATTTAAATCTATCAAGTAATGATATTAGTATCGAAGAAATAATGTCT
TGCAAGGATTTCTTAATTAGACATGGTTTTACTTTAGACAACGTTATCCC
TTCTGCAATGGCAGCCGAACTCACTTTCCAAGGACCTACAACGAAATGCC
TGCCCTTGTTGCAGTTTCATTAGATGATGATATCAATGAAACTGGCATTA
ATATGATACCAGTTGGGAGTATCCCAGACAATTTTCAACATGAAAGTAAT
GGTAACAATTTCAAGTAAGTTTTAAATGTTTGACATTTTAACAAATATTA
GATTTTGCAAGCACGGAAATTTGTggaattgatttttaaaattgtataga
tttaacttttaaaaatatcacGTGGACAAAGTGAAATCAAATGTCCATAT
ATAGTATTTAATTTGCGGGCGACAagtttgaaaatgtaaatttttggtGA
AAACTAGAGGGGAATGAAGGNATGAAATACAGTACACTTCTGGTTATTGA
AAACTCGAAGCTCCAAGGGAGATGGGAATATTTACTTCAAATAACTAAAA
ATCTCTTTCCTGTTAGATTTTTCACTGGAAAactatataccttatcggct
ctTTTTACGCCGATCAATATTGGCGTACTTTTTCGTCACTGACTTAACaa
aggccggtgtaaaaagggccgataaggtagcaGATTTAAATTTATCAAGT
AATGATACTAGTATCGAAGAAATAATGTCTTGCAAGGATTTCTTAATTAG
ACATGGTTTTACTTTAGACAACGTTATCCCTTCTGCAATGGCAGCCGAAC
TCACTTTCCAAGGACCTACAACGAAATGCCTGCCCTTGTTGCAGTTTCAT
TAGATGATGATATCAATGAAACTGGCATTAATATGATACCAGTTGGGAGT
ATCCCAGACAATTTTCAACATGAAAGTAATGGTAACAATTTCAAGTAAGT
TTTAAATGTTTGACATTTTAACAAATATTAGATTTTGCAAGCACGGAAAT
TTGTGGAATTGATTTTTAAAATTGTATAGATTTAACTTTTAAAAATATCA
CGTGGACAAAGTGAAATCAAATGTCCATATATAGTATTTAATTTGCGGGC
GACAAGTTTGAAAATGTAAATTTGTGAATGAGTGAAACGGTTTCCCAAAA
AGGCAACAACTCACAAAAGAGAAAATTCAATTCCGAAGCTGTGGGAAATC
TGATCATATTATTCAATACTTTTTAATCTAGTTTTGCTCTGATCGGAATG
ACCTACGTTAAACTTGCAAAgaaaaaagacaacaaaaagCAACACGTAGA
CGACTTCAGAAGAAACCANGGGAAATCTGATCATATTATTCAATACTTTT
TAATCTAGTTTTGCTCTGATCGGAATGACCTACGTTAAACTTGCAAAGAA
AGAAGACAACAAAAAGCAACACGTAGACGGCTTCAGAAGAAACCGAGGCC
TTCACTACGTGTGCAAAATCAAGCACAAAGATTCATGGTATCTGTATGAC
GGGTTAAAACCGCACGTGGAGCCCACCCATAAAGAAGCTTCATACGCAAA
CTTTCAAATGACCTACCTCCTTTATGGTATTTTTAAAATTAGAGGCTGAT
CTGAAttagcaattttttatttgattttaaccAAATCTGCTTTTAGGGCG
GTAAAATCTATCTTGGTAAACTTTCGTGGTTTGTAGGTTTATCGGTGTAT
TTGTACCGTTTTTGGGTTCTAGCTTAAAGGAGACACCTCTTTTGAGTAAA
CCGTGAGCGTGGTCACTCAAAAGAGAATCTCACCCCAGTTTCATAGAAAG
ATTCAAACATAAGCACTTTGGTATTCGGTATTCTTTAGCCTTTGATTTAT
ACAATTTctctatttattttcttttagtgATACATTCGTCAACAGGATCT
ACCAGTGCACATTCATCAACAGGATCAACCAGTGTAACGAGTAAATACAT
ACCCTCTGATAACTTTGCTACTTGCATCATATGAGATTTTTCGGTCCTGA
ACCTGTGGCCTTGAATCCCGTGATCCCTGTTGCCCTGCTTTTTGACCCCG
CCCtaataaaaaatggaaaacaaaTTCTTTTTACTTAGGACGTTGCATTT
TAATCCGGAAAATATTTGAAGGTGCGGGCTGATGGCATTTTAATGTTGCT
TTAAGTTGCTTTTACTTTATTTTCTGAGAGGGTTTAGGTTTATAATTGAA
ATGATGAGCTTTTCACGACAGATTTctcatgttttttgaaaattcagtgt
aatcaaattttgtttaaCGTCCAATTCATTTATTTCATTCTAAAAGTTCT
AAAAGCTATATTTTGGGCGCACTTGTGATGGGTTACCAAGTGCTTTTCAT
AACGTGACTTTTGACCTAACATACTTGACTATTACAGCTTCCACTGACAA
TGACTGGACCATGACGTTGACTTTGACAATGATTTTTTCAGACGATAACT
TCATTTTCAGAGTTTGATAAAAACTCGTGTATGTTCATTTCAATCTttcg
ttgttgtttttttatacaTCTAAGTCTTAGAATTTGAGTTGTCTGGTAAC
TTGCTAAACGAAACTTTGAGACTTTGGTGAGTAGTGAGATGAATTCAGGA
AAATCAAATCACGCAATTAATGGACCTATTCTAAAACAACATAACATAAA
TTTTGCAAGACTGACGAAACAGGCTATTAATTAATTTACTCTCCATTTGA
TACATACAAATTTTAAAAAACCTTAACCTTTTTTTTCTGATGAACGTCTA
AGATCTCAAATAAAAGTTGATCTGAACCTCCTTTGTATTGATAAACCCCT
TTCTTTTATTCAGCCCAACCCCCTGATTTGCTGATTTCAGCGAACAATGT
GCGGGTAAGTAGTTTATAcataatttcctttttttatttttctcgatGTT
GTCCAACTCAGGCCCTTTAAGTTGTTCTGAaacgaaaattttattttccc
tcttttttaaGATCTCTCTGGTACAGTCTAAAAAAACACCGACAGAGTTA
TATGTTCAATGAAAAGGCCTCACGCATCAATCAACACTTTTAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTTGAAAGTACCTCTGTAGTGGAGGGTTTCATTGTGCAATATAGTTAAA
ATACGGCTTGAACTTTGAACATTCTGAAATACTGAAGTTTTGGTAATTCT
TTCGTGCATAGAGAAAAGACTACAAATATATCTTTCACTATTGAGTTAGT
TTTGAATAGCCACCTGCTTGAACTACTCGCGTACAAAAGTTGAGATGAAA
AGCTCAACGCTGTATCCCGCGGAGGTGCCATTTTATGTATTTCTTAGCGA
TTTTCTCCACATTAATGAAATTCTATGTAAATATTTCACCGACTTGATGG
GTATCATTGTAACCATATTAAAATTCTATCTTTTTCCGTTATGAAGccga
aaaaatttctaaaaaataattttttttgaaaaagtaatgatgtttcaaaa
atggttagtagaatcgactttttttccgaaaagaaaTCCACTTAAAGGGC
CTGAGAATGTTGTTACTTTTTATCGTTTCCTATGTTTAATGATTGATTCC
CTCCCTATATAGTATATAGTGTAATAGAAGGTAAGATTAACTATTCAATA
TTAGAGAATAACTGTATAACCTATTTTCAAATCCACAGTCTGAAAGTTCA
AGCAACCTAAAACACTTAGCAGGCAACGCGAAGAACCCAATACTtgtgta
agatttttttttgtgtattGATTTTTCCTTTTAGATGCTATCACATCCGA
TTATTGAATTCAATATCTTGTGCAGCTCgcgcaaattttgaataacatcg
gttagattttgaaaaaagactgcttccaaaaactaataaattgcAAATAT
ATTTTGTGATACTTCGGTTTATTGTgataaatcaaatttctttcgTTTTC
TTCTAAGCGAAGACGCAGTATCAACAGCAAATATTCGAAATATCAACGTA
CAACAAATGATCAAAGGTAATTTACTATTGCTGTTATTGCTCTTATTTTT
ATCACAAAGGGTATAAGAGTACCTTCTTCNAAATATCAACGTACAACAAA
TGATCAAAGgtaatttcttatttttattataaaggGTATAAGAGTACCTT
CTTCTAACATTGTCGTGATATATTTGTCCTACCTTCTTCTTTTTATTATA
AAGGGTATAAGGGTACCTTACCTAGGAGTAATAACTGCAATGTTTTTCTC
TATAATCTATAATGATATTTCACTTTCATCATATTTCAATTATGCAACAG
TCTCTTTTCTAGAaatgaatgaaacaaaaatttatgaaaaataacaagga
ataaaagaaattaaagtTACAAGTAAAATCTAAAccttaaattgaaaata
aatatttattcTAGATTTTGGAGTTTGCACTGATGTACCTAGATGTTTTG
GTAGGTCCTTTTCGtctaaaaaagttgattttgttcTATACTAAATCCCT
ATTCCAATAAGGTAAATGCGTGTGATCACGATTTTGGGTACTGCTAATGC
AGATCTGTATTGCAATATTCTCTTGTTTTTTAGATTCCCCTGATTTTTGT
TTCACCA

Coding sequence (CDS) from alignment at sc0000726:7576..13682+

>TCONS_00029136 ID=TCONS_00029136|Name=TCONS_00029136|organism=Clytia hemisphaerica|type=CDS|length=5355bp|location=Sequence derived from alignment at sc0000726:7576..13682+ (Clytia hemisphaerica)
AAACTACCAGTTTGGGGAGGTTCACTGAATCATTCTGGTCAAACTCTTAT
ATTTTCGGACACTTGCTTGGTAGACAGCTGGATCACTCTTTTGAAAATTG
CCTTTTTGAACTGGCCACATCTTCGTACCCACAAGTCCTTTCCCTCCAAA
ATGCAACAAGTAATGGAACTGGTAGATGCAGACCTTTACGATGAAGTCAA
ACTCAAGTTTGCAGTTTGGAATAGTATACCTCTTGATAAAGGAGCagtta
atttttttggaaatgagcGAGCAATGTTCTTAGATCATTTATTGCCGCAC
GATTTCACAATCGAATCGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGA
TTTGACAGTACGTTGTTCGGGCTACCCAACAATCACTAATGCCTCTCACT
CGCACTTCGCTTTACCTCACACTCAAATCATCATTTGGTTTTTTGAGGAA
GAGTCTGTTCGTCAGTGTGGAAGAAAAATGTTGCACCCTACCAATGATGA
CAATACGTTTTGGCAAACTAATACCGAAACAGGACAACGTTATCCCTTCT
GCAATGGCAGCCGAACTCACTTTCCAAGGACCTACAACGAAATGCCTGCC
CTTGTTGCAGTTTCATTAGATGATGATATCAATGAAACTGGCATTAATAT
GATACCAGTTGGGAGTATCCCAGACAATTTTCAACATGAAAGTAATGGTA
ACAATTTCAATTTTGCTCTGATCGGAATGACCTACGTTAAACTTGCAAAG
AAAGAAGACAACAAAAAGCAACACGTAGACGGCTTCAGAAGAAACCGAGG
CCTTCACTACGTGTGCAAAATCAAGCACAAAGATTCATGGTATCTGTATG
ACGGGTTAAAACCGCACGTGGAGCCCACCCATAAAGAAGCTTCATACGCA
AACTTTCAAATGACCTACCTCCTTTATGtgATACATTCGTCAACAGGATC
TACCAGTGCACATTCATCAACAGGATCAACCAGTGTAACGACTTCCACTG
ACAATGACTGGACCATGACGTTGACTTTGACAATGATTTTTTCAGACGAT
AACTTCATTTTCAGAGTTTGAAAACTACCAGTTTGGGGAGGTTCACTGAA
TCATTCTGGTCAAACTCTTATATTTTCGGACACTTGCTTGGTAGACAGCT
GGATCACTCTTTTGAAAATTGCCTTTTTGAACTGGCCACATCTTCGTACC
CACAAGTCCTTTCCCTCCAAAATGCAACAAGTAATGGAACTGGTAGATGC
AGACCTTTACGATGAAGTCAAACTCAAGTTTGCAGTTTGGAATAGTATAC
CTCTTGATAAAGGAGCagttaatttttttggaaatgagcGAGCAATGTTC
TTAGATCATTTATTGCCGCACGATTTCACAATCGAATCGGTTTGTTCTAG
TGAGATATGCCCTCAAAAGGATTTGACAGTACGTTGTTCGGGCTACCCAA
CAATCACTAATGCCTCTCACTCGCACTTCGCTTTACCTCACACTCAAATC
ATCATTTGGTTTTTTGAGGAAGAGTCTGTTCGTCAGTGTGGAAGAAAAAT
GTTGCACCCTACCAATGATGACAATACGTTTTGGCAAACTAATACCGAAA
CAGGACAACGTTATCCCTTCTGCAATGGCAGCCGAACTCACTTTCCAAGG
ACCTACAACGAAATGCCTGCCCTTGTTGCAGTTTCATTAGATGATGATAT
CAATGAAACTGGCATTAATATGATACCAGTTGGGAGTATCCCAGACAATT
TTCAACATGAAAGTAATGGTAACAATTTCAATTTTGCTCTGATCGGAATG
ACCTACGTTAAACTTGCAAAGAAAGAAGACAACAAAAAGCAACACGTAGA
CGGCTTCAGAAGAAACCGAGGCCTTCACTACGTGTGCAAAATCAAGCACA
AAGATTCATGGTATCTGTATGACGGGTTAAAACCGCACGTGGAGCCCACC
CATAAAGAAGCTTCATACGCAAACTTTCAAATGACCTACCTCCTTTATGt
gATACATTCGTCAACAGGATCTACCAGTGCACATTCATCAACAGGATCAA
CCAGTGTAACGACTTCCACTGACAATGACTGGACCATGACGTTGACTTTG
ACAATGATTTTTTCAGACGATAACTTCATTTTCAGAGTTTGAAAACTACC
AGTTTGGGGAGGTTCACTGAATCATTCTGGTCAAACTCTTATATTTTCGG
ACACTTGCTTGGTAGACAGCTGGATCACTCTTTTGAAAATTGCCTTTTTG
AACTGGCCACATCTTCGTACCCACAAGTCCTTTCCCTCCAAAATGCAACA
AGTAATGGAACTGGTAGATGCAGACCTTTACGATGAAGTCAAACTCAAGT
TTGCAGTTTGGAATAGTATACCTCTTGATAAAGGAGCagttaattttttt
ggaaatgagcGAGCAATGTTCTTAGATCATTTATTGCCGCACGATTTCAC
AATCGAATCGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGATTTGACAG
TACGTTGTTCGGGCTACCCAACAATCACTAATGCCTCTCACTCGCACTTC
GCTTTACCTCACACTCAAATCATCATTTGGTTTTTTGAGGAAGAGTCTGT
TCGTCAGTGTGGAAGAAAAATGTTGCACCCTACCAATGATGACAATACGT
TTTGGCAAACTAATACCGAAACAGGACAACGTTATCCCTTCTGCAATGGC
AGCCGAACTCACTTTCCAAGGACCTACAACGAAATGCCTGCCCTTGTTGC
AGTTTCATTAGATGATGATATCAATGAAACTGGCATTAATATGATACCAG
TTGGGAGTATCCCAGACAATTTTCAACATGAAAGTAATGGTAACAATTTC
AATTTTGCTCTGATCGGAATGACCTACGTTAAACTTGCAAAGAAAGAAGA
CAACAAAAAGCAACACGTAGACGGCTTCAGAAGAAACCGAGGCCTTCACT
ACGTGTGCAAAATCAAGCACAAAGATTCATGGTATCTGTATGACGGGTTA
AAACCGCACGTGGAGCCCACCCATAAAGAAGCTTCATACGCAAACTTTCA
AATGACCTACCTCCTTTATGtgATACATTCGTCAACAGGATCTACCAGTG
CACATTCATCAACAGGATCAACCAGTGTAACGACTTCCACTGACAATGAC
TGGACCATGACGTTGACTTTGACAATGATTTTTTCAGACGATAACTTCAT
TTTCAGAGTTTGAAAACTACCAGTTTGGGGAGGTTCACTGAATCATTCTG
GTCAAACTCTTATATTTTCGGACACTTGCTTGGTAGACAGCTGGATCACT
CTTTTGAAAATTGCCTTTTTGAACTGGCCACATCTTCGTACCCACAAGTC
CTTTCCCTCCAAAATGCAACAAGTAATGGAACTGGTAGATGCAGACCTTT
ACGATGAAGTCAAACTCAAGTTTGCAGTTTGGAATAGTATACCTCTTGAT
AAAGGAGCagttaatttttttggaaatgagcGAGCAATGTTCTTAGATCA
TTTATTGCCGCACGATTTCACAATCGAATCGGTTTGTTCTAGTGAGATAT
GCCCTCAAAAGGATTTGACAGTACGTTGTTCGGGCTACCCAACAATCACT
AATGCCTCTCACTCGCACTTCGCTTTACCTCACACTCAAATCATCATTTG
GTTTTTTGAGGAAGAGTCTGTTCGTCAGTGTGGAAGAAAAATGTTGCACC
CTACCAATGATGACAATACGTTTTGGCAAACTAATACCGAAACAGGACAA
CGTTATCCCTTCTGCAATGGCAGCCGAACTCACTTTCCAAGGACCTACAA
CGAAATGCCTGCCCTTGTTGCAGTTTCATTAGATGATGATATCAATGAAA
CTGGCATTAATATGATACCAGTTGGGAGTATCCCAGACAATTTTCAACAT
GAAAGTAATGGTAACAATTTCAATTTTGCTCTGATCGGAATGACCTACGT
TAAACTTGCAAAGAAAGAAGACAACAAAAAGCAACACGTAGACGGCTTCA
GAAGAAACCGAGGCCTTCACTACGTGTGCAAAATCAAGCACAAAGATTCA
TGGTATCTGTATGACGGGTTAAAACCGCACGTGGAGCCCACCCATAAAGA
AGCTTCATACGCAAACTTTCAAATGACCTACCTCCTTTATGtgATACATT
CGTCAACAGGATCTACCAGTGCACATTCATCAACAGGATCAACCAGTGTA
ACGACTTCCACTGACAATGACTGGACCATGACGTTGACTTTGACAATGAT
TTTTTCAGACGATAACTTCATTTTCAGAGTTTGAAAACTACCAGTTTGGG
GAGGTTCACTGAATCATTCTGGTCAAACTCTTATATTTTCGGACACTTGC
TTGGTAGACAGCTGGATCACTCTTTTGAAAATTGCCTTTTTGAACTGGCC
ACATCTTCGTACCCACAAGTCCTTTCCCTCCAAAATGCAACAAGTAATGG
AACTGGTAGATGCAGACCTTTACGATGAAGTCAAACTCAAGTTTGCAGTT
TGGAATAGTATACCTCTTGATAAAGGAGCagttaatttttttggaaatga
gcGAGCAATGTTCTTAGATCATTTATTGCCGCACGATTTCACAATCGAAT
CGGTTTGTTCTAGTGAGATATGCCCTCAAAAGGATTTGACAGTACGTTGT
TCGGGCTACCCAACAATCACTAATGCCTCTCACTCGCACTTCGCTTTACC
TCACACTCAAATCATCATTTGGTTTTTTGAGGAAGAGTCTGTTCGTCAGT
GTGGAAGAAAAATGTTGCACCCTACCAATGATGACAATACGTTTTGGCAA
ACTAATACCGAAACAGGACAACGTTATCCCTTCTGCAATGGCAGCCGAAC
TCACTTTCCAAGGACCTACAACGAAATGCCTGCCCTTGTTGCAGTTTCAT
TAGATGATGATATCAATGAAACTGGCATTAATATGATACCAGTTGGGAGT
ATCCCAGACAATTTTCAACATGAAAGTAATGGTAACAATTTCAATTTTGC
TCTGATCGGAATGACCTACGTTAAACTTGCAAAGAAAGAAGACAACAAAA
AGCAACACGTAGACGGCTTCAGAAGAAACCGAGGCCTTCACTACGTGTGC
AAAATCAAGCACAAAGATTCATGGTATCTGTATGACGGGTTAAAACCGCA
CGTGGAGCCCACCCATAAAGAAGCTTCATACGCAAACTTTCAAATGACCT
ACCTCCTTTATGtgATACATTCGTCAACAGGATCTACCAGTGCACATTCA
TCAACAGGATCAACCAGTGTAACGACTTCCACTGACAATGACTGGACCAT
GACGTTGACTTTGACAATGATTTTTTCAGACGATAACTTCATTTTCAGAG
TTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016574XLOC_016574Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029136-proteinTCONS_00029136-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00029136-exon-sc0000726-1491911889:7576..8108TCONS_00029136-exon-sc0000726-1491911889:7576..8108Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:7576..8108TCONS_00029136-exon-sc0000726-1510915933:7576..8108Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:7576..8108TCONS_00029136-exon-sc0000726-1575043694:7576..8108Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:9093..9269TCONS_00029136-exon-sc0000726-1491911889:9093..9269Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:9093..9269TCONS_00029136-exon-sc0000726-1510915933:9093..9269Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:9093..9269TCONS_00029136-exon-sc0000726-1575043694:9093..9269Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:9684..9901TCONS_00029136-exon-sc0000726-1491911889:9684..9901Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:9684..9901TCONS_00029136-exon-sc0000726-1510915933:9684..9901Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:9684..9901TCONS_00029136-exon-sc0000726-1575043694:9684..9901Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:10203..10265TCONS_00029136-exon-sc0000726-1491911889:10203..10265Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:10203..10265TCONS_00029136-exon-sc0000726-1510915933:10203..10265Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:10203..10265TCONS_00029136-exon-sc0000726-1575043694:10203..10265Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:10713..10803TCONS_00029136-exon-sc0000726-1491911889:10713..10803Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:10713..10803TCONS_00029136-exon-sc0000726-1510915933:10713..10803Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:10713..10803TCONS_00029136-exon-sc0000726-1575043694:10713..10803Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:11139..11179TCONS_00029136-exon-sc0000726-1491911889:11139..11179Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:11139..11179TCONS_00029136-exon-sc0000726-1510915933:11139..11179Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:11139..11179TCONS_00029136-exon-sc0000726-1575043694:11139..11179Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:12764..12822TCONS_00029136-exon-sc0000726-1491911889:12764..12822Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:12764..12822TCONS_00029136-exon-sc0000726-1510915933:12764..12822Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:12764..12822TCONS_00029136-exon-sc0000726-1575043694:12764..12822Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:13033..13091TCONS_00029136-exon-sc0000726-1491911889:13033..13091Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:13033..13091TCONS_00029136-exon-sc0000726-1510915933:13033..13091Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:13033..13091TCONS_00029136-exon-sc0000726-1575043694:13033..13091Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:13490..13525TCONS_00029136-exon-sc0000726-1491911889:13490..13525Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:13490..13525TCONS_00029136-exon-sc0000726-1510915933:13490..13525Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:13490..13525TCONS_00029136-exon-sc0000726-1575043694:13490..13525Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1491911889:13659..13682TCONS_00029136-exon-sc0000726-1491911889:13659..13682Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1510915933:13659..13682TCONS_00029136-exon-sc0000726-1510915933:13659..13682Clytia hemisphaericaexon
TCONS_00029136-exon-sc0000726-1575043694:13659..13682TCONS_00029136-exon-sc0000726-1575043694:13659..13682Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000726supercontigsc0000726:7576..13682 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	3.287	2.85144	2.36793	4.37486	5.056e-07	1.31644	0.680385	1.17423	1.36722	0.518154	0	0	0	0.125705	0	0	0	0	0	0	0.592033	3.10045	0	0	0	0.273258
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00029136 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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