|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029083 ID=TCONS_00029083|Name=TCONS_00029083|organism=Clytia hemisphaerica|type=transcript|length=2604bp
caaaaactattattctccccaattagatatcgttttaaggttctttgagg
gtgtaaaaagtgaaaaaattttcttcgtcgcctaaccatggtgggcgaca
tttattccaaaatgttggccccctcacttaaaatggctcgccggggctCA
TGAAAAGGGTAACTTTGGGTACACTATTTCGCTTCTCTTTAAAAGTCTCA
TTTCAATGAAGATTGAACTGGAAAAGAACGAGGATGATAAGGTAGAGCTA
GCAAGGGTAACTTCCTCACGCTCGCGTTGCTGTACTAAGATTGCAAAATG
TGAAATGATCAGTTCATTGGGAGTCTTCTTTGAAATTCCATTATTCGAAC
CTTTATCAGTGTACTCTATGCAGGGCAAATAGCTCTATCATAATATCCGA
CGGAAAACATTTGAAATGATAAGATTTAGAAATGGACGGATAAATATAAA
GCCAATGTCAGTCTTGGGGTTGTATTATCAACTTTAAAACTGAAGTGATA
TCAGgcttttcattgtcttttaccTTTCAAAGGGGGTTCATGATTGGTCC
TTCAGTTTGATTGGCTCAAGCTTTATCACGTGACTAACATGAACGAATCA
TTTTGAATTCTGATTTCAATGAGAAAGGAGAAAGTAGATTTTTGCCTTCC
AGCTCTTTATAAAGGGAGAAAGAAATGGCAAGAATAAGTTAATTTGTCTA
TTGTATTCTTGTCGAGAAGAGCGATCATTTTTGTGATAAGAGAAGGTTAT
TGGGATCCTGATTTGAAGTTGTTTAACAATCCTAATCTACATGCCTGCTT
ATAAGAATAAGGAGCAGCAACACACAGGCGGTGTTTCCAACCATCATTCT
GTGGTCACTTCTTCAAACGAAGACTTAGATCATCATTTTAAAGTCAACAG
TATCATCGAGAACCTACACGCAGCCTGCGATCGTGCAAGTAGAGTGGAAA
GCGCACAGTCTAGCGCAATGATTTCTCTTCTTCCTCCCCCAGATCAACAC
CTCATCGCGCCACCTAACCCTCAACAATCATTCGACGATCTTCTTTCCAA
CGTGCAATCGAACCATAATCAGCCGTTCCAATCGCAAGTCGATCATGTCT
TAGCCCAATTCCCGCCGGACACTTTTAAAAACGCACAGCTTCACTCCATG
ACGTTCGGTGGAAGTGGTCCGACCGGTGATCAAACGGACGCGGACTTGAA
CAACAACCATCCGGGAATGAATAATCGCCCGATCATGAACAACAACAATC
AAACTAAACTCACCGACGATGAAGACGATTCTAGTGATGATATGGACCGC
CCTTCAAAACAGAAACGCCATCGCACCCGTTTTTCACCCGCCCAACTGAA
CGAGCTTGAGCGTTATTTCAGTAAAACACATTACCCTGACATCTTCGTGC
GCGAGGAGTTGGCGATGCGCATTGGACTGACCGAATCGAGAGTTCAAGTT
TGGTTTCAAAACCGTCGTGCCAAATGGAAGAAACGAAAGAAGACCATGTC
TTTATTTCACCACAACAACGGCCTCTTCCCTTCCTACTTCAATCAGAACC
TTCAACCACGCGAGTCGTCTTGCTACCACAACGAACCTCCTCATATCTGG
CCTTCTGCGTCACCCACTAACTTTCCATCCGTCACACCGACTCAAACTTC
CGGAGCCCCTCCACCTCACGTCACAAGCGGCGCAGGTACCCCTTCCACAC
AGTTCCCTTACAGTCAACTTCCGCCGGGCTCATACCCTATCGATCGTAGC
CCAGTTACTTCTCAAGGGGGCTATGGTCTGAATGGTAGTGCTGATTGTTC
TCGAGATCTTGACTACAGCGTGTCATCGGCTGGCTCGCCCACAGGGGGAA
CGCAATATAACACACAACCGACAACTTCTGACCATTCTGATCATTGGCAG
AATACGAACAGCAGCACCAGTGTTCTCGATAACAGGCGAAAGGGAACTGT
GGTTGAACATAAAAGTAGTGCGCCACCTTACAGGTAGAGAAACTTTGAAG
CCCTGAATGCTGTAAGTAAAACTGGACGGACGACATAACGCCGACACCAG
TGACGTTTTTTGTTGTACACCATGGCAATAAAGAAGTATGAACACTTCGC
CCAATGAACTATGAATAGTGGACGGCAAGCATCAAAAGGAGCAATTTTAT
TACATTTAGTGTATAGAAAtctattttcactttttgttaCGCGTTCTCGC
TCTAGCAAAGGTCCCTGATAGAGTAACTCTACAAGTTCTCGACTTTCTAG
TTCACGTTTGAATAAGCGAAAGTAAACCACACCCTATTAAGGGAAAGAAG
GGACTTGACGAGGCGATTACTTTAgaactttcttttattttaaggcaatt
tcattgtgttttgttaagaaatttttaggccgaatattttaatttattta
ttattacctgtgtttatttttctatagtTTTGTTCTGTTTGTTtgaaagt
aaatatcatgtaaataatttttcataaattgtaAACTCCTATCCCTCATA
TTACCcgaatttatttaattttacgGAAAAGCAAAATAATGTAGAATATT
ATTGAACATAATTGAATTTTATTGACTTATGTTTTAAGAGAAAAGATGAG
TTTT Run BLAST on NCBI transcript from alignment at sc0000724:76980..87057+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029083 ID=TCONS_00029083|Name=TCONS_00029083|organism=Clytia hemisphaerica|type=transcript|length=10078bp|location=Sequence derived from alignment at sc0000724:76980..87057+ (Clytia hemisphaerica)
caaaaactattattctccccaattagatatcgttttaaggttctttgagg
gtgtaaaaagtgaaaaaattttcttcgtcgcctaaccatggtgggcgaca
tttattccaaaatgttggccccctcacttaaaatggctcgccggggctCA
TGAAAAGGGTAACTTTGGGTACACTATTTCGCTTCTCTTTAAAAGTCTCA
TTTCAATGAAGATTGAACTGGAAAAGAACGAGGATGATAAGGTAGAGCTA
GCAAGGGTAACTTCCTCACGCTCGCGTTGCTGTACTAAGATTGCAAAATG
TGAAATGATCAGTTCATTGGGAGTCTTCTTTGAAATTCCATTATTCGAAC
CTTTATCAGTGTACTCTATGCAGGGCAAATAGCTCTATCATAATATCCGA
CGGAAAACATTTGAAATGATAAGATTTAGAAATGGACGGATAAATATAAA
GCCAATGTCAGTCTTGGGGTTGTATTATCAACTTTAAAACTGAAGTGATA
TCAGgcttttcattgtcttttaccTTTCAAAGGGGGTTCATGATTGGTCC
TTCAGTTTGATTGGCTCAAGCTTTATCACGTGACTAACATGAACGAATCA
TTTTGAATTCTGATTTCAATGAGAAAGGAGAAAGTAGATTTTTGCCTTCC
AGCTCTTTATAAAGGGAGAAAGAAATGGCAAGAATAAGTTAATTTGTCTA
TTGTATTCTTGTCGAGAAGAGCGATCATTTTTGTGATAAGAGAAGGTTAT
TGGGATCCTGATTTGAAGTTGTTTAACAATCCTAATCTACATGCCTGCTT
ATAAGAATAAGTACATgtatattaaattttatttatttttgtgtttacag
tattaatttgtttttaatttacgCCTGAACCTTTTAGTTTTCCTCTCCTG
TCAGGTTTTTTGGTTCTTATGGGttctatttttcgatttttgctgAATTA
ATTTCAATCCATAGAGTTTTTTCATTAAATAAAAGCTTCGACATTCTACA
GTTTACTTGTCTTAGTAGAGAGGGTGACATTTTCAAATAGGGTGGGGACT
TCAATTTCTAACTTGAATTACATAGATGAATTTCTACTTTGcttcttttt
ctcttttgttagtTCTTCACAATGTATTctcttctttgttttcatggaCT
ACACGGGGAAAATCTGTACTTCCCATTCGCTAGTTCTTTAAAGCTATTCT
CCCCTTATTCTTTCGTGATTCttctttgaaaacaaaaacaaagaagaaaa
ttctAAAGACACAAGGAAGTGAAAAGATAGAAATGaaaagatttttataa
aaagccAATGTATTCATTGTGGAATTTTTAATATCTGTGAGGTTTCGGCC
GAAATGTCATCCCATTCTAATTTGGTTTTCTTCTCACCTAGGGAGCAGCA
ACACACAGGCGGTGTTTCCAACCATCATTCTGTGGTCACTTCTTCAAACG
AAGACTTAGATCATCATTTTAAAGTCAACAGTATCATCGAGAACCTACAC
GCAGCCTGCGATCGTGCAAGTAGAGTGGAAAGCGCACAGTCTAGCGCAAT
GATTTCTCTTCTTCCTCCCCCAGGTATGTTTTACTGTAATTATTTTTTAG
TGATTTCTCCAAATTATTGTTTTGTATCATTCATTAGTTGATTTCTAGTT
GCTTTACCGTTCTCTATTTCTTCCCTTGAATGTCAaagaattttcacttt
ttatctttttttaaaaggaaGAAGCAAATTAAGGACTAATTTGCGCCTAA
TTACGGATTGATTAGTTAGTGATAAATGAAAATTCATTTAtagtttctta
ctattttttTACTACTTAATTCTTTCTCGGTTctttgaagagaatttttt
gaattgctaataaattatttttcaatttttgtgttcgaaatgaattttat
tcggaacttttattttttaaatattttgatcatTCATTTTGGCTGCGTAG
TCATTGAAATTAATCTTAATTTTCTtcaattaattttgaattttaatttg
cGCTTTGCTTTTTAATCTAGCGTACGAAATAGACGCTGATTTTGCAATAG
ACACGCGAGCAACAATATTttagaaatcaaaaaagaaagtgcaaaaaatt
tggcctaactttttttgaaaatgaaattaattcTTTAATAATCGAAATAA
TCCTAGCTTAAAAAATTCTATTCGTCAATAGATCAACACCTCATCGCGCC
ACCTAACCCTCAACAATCATTCGACGATCTTCTTTCCAACGTGCAATCGA
ACCATAATCAGCCGTTCCAATCGCAAGTCGATCATGTCTTAGCCCAATTC
CCGCCGGACACTTTTAAAAACGCACAGCTTCACTCCATGACGTTCGGTGG
AAGTGGTCCGACCGGTGATCAAACGGACGCGGACTTGAACAACAACCATC
CGGGAATGAATAATCGCCCGATCATGAACAACAACAATCAAACTAAACTC
ACCGACGATGAAGACGATTCTAGTGATGATATGGACCGCCCTTCAAAACA
GAAACGCCATCGCACCCGTTTTTCACCCGCCCAACTGAACGAGCTTGAGC
GTTATTTCAGTAAAACACATTACCCTGACATCTTCGTGCGCGAGGAGTTG
GCGATGCGCATTGGACTGACCGAATCGAGAGTTCAAGTAagttgttttct
ttttacattacAAATCTGTTTCAATTTCCTCATCATTACTTGCTTTAAAT
CCACTTTTTGTCGTGTGCAACGCatgataaaatcaaaaactttaaatata
ttttacaaTTATAAACCCTTGATGAAAATTCCCTCAGAAACTGGAATAAG
TCGAATCACTTATAACACAACATATTGCAATCGCTTCACCTAAACTTTTG
CTGGTACTTTTTCACCACCTTCACACTCTCCTGGAAGCGTTTTTCCATTT
CTACAGGTATTTGTTGAAGGTGATGTTTCCTCCAGATTTATAGCCTTTTT
CTTGTGCTAATTTATGTTTAATTTAACGATTAAATTAACGAGAGGTAATG
AATACTAATCGGTGATAATTAAATATCTGCTGATTAATTAGTTTAATGCA
GATAATTTATTGAATTTACACTTTGTTTGCAAACAAGAAGAAATGAGGGC
TTTTAAGAAAGAAGGGAAGACGGGTTTTAATTTCTCGATCTTGTTTCTAA
GGTAAAATTACTTGGTAAAATCTTGGAATTCAACTGTTTCCAAAAAAATA
GAGAGTTTAGACATGAAAGGTTTtgcgatttttgaaaaacatttctaaTG
AAACTGTGTGAAAAGTTCTTCCGAAAAAACGTTGAGGCGGTTTCAGTTTT
TTGTTCTTCCTTACAGTCTATTAAACTCTCGTTTTCATGAGTTTTGAAAG
GGCTTTCAAGCAAGGATGNTCCTTACAGTCTATTAAACTCTCGTTTTCAT
GAGTTTTGAAAGGACTTTCAAGCAAGGATGTTAAGTTAAACGCACTGCTG
AAAGTTTATTTGTAGGAACGGTCCGCAAAGCGGCTCATTAGTACACTCAT
TCgataagaaaatctttttttgattttatgttgAAAAAGTGAGTTAGATA
TACCTTACTAATTGAACCAAACCTTTTTCATAAATCTCCAAAAAGAAGAT
ACATTTTATCAATTCTTCGTAGCAGGATAATAAAGAAGAGTCTAACGAGG
AGGTGTTAACCGCGTTGTCAAAAGCACTATTTGTGCCCCCTAAACCTCTT
GCCCAACAGGTGGAACTCAATCCTGTTACTTAAAACGTCCTCTAACCAAC
CCTCTAAATAGTGCGCTAAACGGTTTTGTCTAATTAATATACCCTCGAGA
TTCCCTCTTTATATAGTTGGGGCCCTAGGATTATCTGCACCTAGTCTATA
GTATTTGTAACTTGCCATTGATTTGACGGAGTATGCAAATCAGAAAAACA
ATGGTCCTTCTTTTTGGGCTTCAAATTAGACATCTTTTGCTTCAGTATAT
GTTCCTTTGTGCTCTAGTCCTTCTCAAATTTGCTCCTTCTTTGTACTTTC
ATTATGACTTTTGACGTCGTCATTTTCCATCCATTACCACTTTTTAGCGC
CCTAGCTTAACTGGACTTTTTCCTCTAAAACctttgaattgttatttttc
aatttgaGATATTTGAAGTCTGCTTGAAGATATAAACTGGTTTAAGATGT
TTTTGAATTGCCCAGGTTTTCTTCTTCTCTGTGTGACAGCAAAAATGTTT
GCTCAAATGAACAGATTTTTTTGTATGTTGTTTTTgcattaaaaagtaat
tttccTTGATAAAACTGAGAGGGTTGATTTTTGGGGAGAACACAGCCTTC
TTATATGTCTCTAAGGAACTGAAACCTGTTCACTTTTCATTCTTCATTTA
AAAGCTTTTTCCTGTCAGAAAGTCGTATTGTTTTGTTAAAGTCACACAGA
AAACAATAAATCTCGGCTGTTCTCTTCTCTTTCTGCCTGAAAGAAAATTG
GGGAGAAATTTAGGTCTCACTCTCATTTATTTACTATCTGATATTTGATG
TGAAAACTAAAGAAAATCCTTAGAGTAAAACCAAACACTCTTGTGTTAAA
GTAGAGTGTTAAACCAATAACCCAAAGCCCTAAGACAGATGCCTAACTTT
GACCAATCagaattttttgaatatatAAATCCTCGCAAAATTTATAACAT
CTGTGGGTAACGAATTTGCCGTATGGATCGTCTTCCGTGTTTATCTTCTA
TTTCCTTAAGACAAGAAGGGTATTAGGTCTCCTATATATGAAGCCTCCGA
TTTTTGATAGCTTCCCTTTGTTACATTAATACTATGTTGCGAACAGATTT
TGATTTACGAAACATAGATTAGGCGATAAGGTGAAGTCGATGATAACACA
CTGCGATCAGAGAGTGTTGAGGGATTACAGAATTATTGAATAGCCCTGGG
AAAGTACAGTCTGGTGTTCTGGACATGTTTGTAATGAAAAGCTATGATTA
AAATCCCGATTATTTTGAAAGACAAACATTACTTTAGAAAGttggaaaaa
ggaaaaataatgtATTGAAATAtcatgatgaaaaatgaaaattttatgat
acttcttttttttgagcttttgagGAAACAGATTtattataaatagaaaa
aataacatgCTTGTGACATTCGCCTGCGAAAACGATGAACCCTTATTTTT
AcgattctttttcaaaagttggTAAATAATCCTCTTGCCCACACTTTTCC
GAAGCTCTCGAATTTTGCGTCACACTCTGGCAACTAAGAAGGGTACTTAA
AAGCGAGGCGTTTGGATATAACCAGCTTGCAAGAGTTAAGCGGCTTCTAT
ACTTTTACCCTGATAATCGATGCACTCACGGAGGGGGGAGACTCGGGTTA
TCCAAATCGAAAGTTGCACCATTTAAAACTATCAAATTGTTTGTTATTAA
TTTCTAATACTTTGTTGACAGTCAAGGTTATCATTTTGCTATGATGAGAT
CAAAAAGTAGATGGAATGGATTGAAAGATCCATCATCCTACCGATCAAAG
AGATAATCATGCAGCGACAATCGATATAAGCTCCTTTGTGACATGTTAAT
ATGTGCCTTTGAATGTTATTGTATCAGGGACATTAATACTTCTCTGGTAC
AATTACATCAGAAActtcatattttgatattttgaaaaacaaatatcGAA
CTATTTGATGCAGGTTAGCGGGTGACACCTAAGTGATCAGCATTGGGAAA
AATTCTCAAAGAATCTCATTTTATGATTGCATAATATTCCAAAGTGCTCG
ATATTTGTCTAGCCTgtgttttttatatattttgaatacGACTCTTCCAA
AAGTAGATTGGCATTTTTGTTGAATATCTGCCAAGCTCGTTAACGGTACC
ATCAAACAAACGaaatttgagattatttttttttcataaaaacatcccat
aaatcttttttattagaatactTTAGTACATAGCACAGATTTCTTTTGGA
AGATGGAGAAAGAAAAGGGCGTTGCCCGTTTATATAATTGTGAAATTTAT
TGACTGATTTCATAGTGCAAAATTATTTAAATGAAACTCAATATTTTCGA
CGGGTGAAATCTTAAATCTTTGCTGAGAGTGTTGACAATATTGCTTTGCT
TATAGCATATTGTTGTAATACAATCGTCAAATGATGTTTGAAAACAAATC
GTTTCAACAAACTCTGTGGATTACATTTCATTTACGCGTTTTCTGTATTT
ATATTCACGTGGGCTTCACCTGGAACCTTGCTCCGTGGGAATATGCCTCT
TTCCGATCTCTTTAACATTCGATGAAAATGACCCTCAATATAAGTGATGA
GTTGGCTTCTGCGTTCAGAAATCTTTAAATATAAATGTAAACTTTTAATA
ATCATAATTTGTTTTCGTCTGCAATTTAATTTGGTCCATTAAAATNCTTT
TAATCATCATAATTTATTTTCGTCTGCAATTTAATTTAGTCCATTAAAag
tatttcaatttcaatttgtaAAAACAGTAGGTTTTTAGGTCTAATAAAAG
TGGCAAAGATATGTAATTAATTTCCAGAcgaaaaacagcaaaatatgcaa
aaaatgaTGGAGCTAATGAGTGAAGCAGATTTAGTTTTTTCCCAttgata
atttttctcaaactttGTTAATGATTTTCACAGACACATAATTCTCACAA
AGGGAAGTGCAATATTTGTAAGATCAAATAACCACCGCTGAAGGATAAGT
TTAATGAGATTATCTAGATAAGTTCTATATgttttgttaaactttttctt
ttgaacaCTGGATTTGAGTTTTCCCTACATCCCATTTACGTCAATTTTTG
TTCACTCGAAGCCAACGGAAGAAATGTCGTATTTCCATTCCTCCTTCCTC
GCGATAGCAATATTTTCAACATCCAGCCTGCACGAACATCCAGCCTGCAC
GAActcaccaacttttttttctattgacAGGTTTGGTTTCAAAACCGTCG
TGCCAAATGGAAGAAACGAAAGAAGACCATGTCTTTATTTCACCACAACA
ACGGCCTCTTCCCTTCCTACTTCAATCAGAACCTTCAACCACGCGAGTCG
TCTTGCTACCACAACGAACCTCCTCATATCTGGCCTTCTGCGTCACCCAC
TAACTTTCCATCCGTCACACCGACTCAAACTTCCGGAGCNttttttttga
gcttttgagGAAACAGATTtattataaatagaaaaaataacatgCTTGTG
ACATTCGCCTGCGAAAACGATGAACCCTTATTTTTAcgattctttttcaa
aagttggTAAATAATCCTCTTGCCCACACTTTTCCGAAGCTCTCGAATTT
TGCGTCACACTCTGGCAACTAAGAAGGGTACTTAAAAGCGAGGCGTTTGG
ATATAACCAGCTTGCAAGAGTTAAGCGGCTTCTATACTTTTACCCTGATA
ATCGATGCACTCACGGAGGGGGGAGACTCGGGTTATCCAAATCGAAAGTT
GCACCATTTAAAACTATCAAATTGTTTGTTATTAATTTCTAATACTTTGT
TGACAGTCAAGGTTATCATTTTGCTATGATGAGATCAAAAAGTAGATGGA
ATGGATTGAAAGATCCATCATCCTACCGATCAAAGAGATAATCATGCAGC
GACAATCGATATAAGCTCCTTTGTGACATGTTAATATGTGCCTTTGAATG
TTATTGTATCAGGGACATTAATACTTCTCTGGTACAATTACATCAGAAAc
ttcatattttgatattttgaaaaacaaatatcGAACTATTTGATGCAGGT
TAGCGGGTGACACCTAAGTGATCAGCATTGGGAAAAATTCTCAAAGAATC
TCATTTTATGATTGCATAATATTCCAAAGTGCTCGATATTTGTCTAGCCT
gtgttttttatatattttgaatacGACTCTTCCAAAAGTAGATTGGCATT
TTTGTTGAATATCTGCCAAGCTCGTTAACGGTACCATCAAACAAAcgaaa
tttgagatttttttttttcataaaaacatcccataaatcttttttattag
aatactTTAGTACATAGCACAAATTTCTTTTGGAAGATGGAGAAAATAAA
GGGCGTTGCCCGTTTATATAATTGTGAAATTTATTGACTGATTTCATAGT
GCAAAATGATTTAAATGAAACTCAATATTTTCGACAGGTGAAATCTTAAA
TCTTTGCTGAGAGTGTTGACAATATTGCTTTGCTTATAGCATATTGTTGT
AATACAAACGTCAAACGATGTTTGAAAACAAATCGTTTCAACAAACTCTG
TGAATTACATTTCATTTACGCGttttctgtattttttattCACGTGGGCT
TCACCTGGAACCTTGCTCCGTGGGAATATGCCTGTTTCCGATCTCTTTAA
CATTCGATGAAAATGACCCTCAATATAAGTGATGAGTTGGCTTCTGCGTT
CAGAAATCTTTAAATATAAATGTAAGCTTTTAATCATCATAATTTATTTT
CGTCTGCAATTTAATTTAGTCCATTAAAagtatttcaatttcaatttgta
AAAACAGTAGGTTTTTAGGTCTAATAAAAGTGGCAAAGATATGTAATTAA
TTTCCAGAcgaaaaacagcaaaatatgcaaaaaatgaTGGAGCTAATGAG
TGAAGCAGATTTAGTTTTTTCCCAttgataatttttctcaaactttGTTA
ATGATTTTCACAGACACATAATTCTCACAAAGGGAAGTGCAATATTTGTA
AGATCAAATAAACACCGCTGAAGGATAAGTTTAATGAGATTATCTAGATA
AGTTCTATATgttttgttaaactttttcttttgaacgCTGGATTTGAGTT
CTCCCTCCATCCCATTTACGTCGATTTTTGTTCACTCGAAGCCAACGGAA
GAACATTCGCGATAGCAATATTTTCAACATCCAGTCTGCACGAActcacc
aacttttttttctattgacAGGTTTGGTTTCAAAACCGTCGTGCCAAATG
GAAGAAACGAAAGAAGACCATGTCTTTATTTCACCACAACAACGGCCTCT
TCCCTTCCTACTTCAATCAGAACCTTCAACCACGCGAGTCGTCTTGCTAC
CACAACGAACCTCCTCATATCTGGCCTTCTGCGTCACCCACTAACTTTCC
ATCCGTCACACCGACTCAAACTTCCGGAGCCCCTCCACCTCACGTCACAA
GCGGCGCAGGTACCCCTTCCACACAGTTCCCTTACAGTCAACTTCCGCCG
GGCTCATACCCTATCGATCGTAGCCCAGTTACTTCTCAAGGGGGCTATGG
TCTGAATGGTAGTGCTGATTGTTCTCGAGATCTTGACTACAGCGTGTCAT
CGGCTGGCTCGCCCACAGGGGGAACGCAATATAACACACAACCGACAACT
TCTGACCATTCTGATCATTGGCAGAATACGAACAGCAGCACCAGTGTTCT
CGATAACAGGCGAAAGGGAACTGTGGTTGAACATAAAAGTAGTGCGCCAC
CTTACAGGTAGAGAAACTTTGAAGCCCTGAATGCTGTAAGTAAAACTGGA
CGGACGACATAACGCCGACACCAGTGACGTTTTTTGTTGTACACCATGGC
AATAAAGAAGTATGAACACTTCGCCCAATGAACTATGAATAGTGGACGGC
AAGCATCAAAAGGAGCAATTTTATTACATTTAGTGTATAGAAAtctattt
tcactttttgttaCGCGTTCTCGCTCTAGCAAAGGTCCCTGATAGAGTAA
CTCTACAAGTTCTCGACTTTCTAGTTCACGTTTGAATAAGCGAAAGTAAA
CCACACCCTATTAAGGGAAAGAAGGGACTTGACGAGGCGATTACTTTAga
actttcttttattttaaggcaatttcattgtgttttgttaagaaattttt
aggccgaatattttaatttatttattattacctgtgtttatttttctata
gtTTTGTTCTGTTTGTTtgaaagtaaatatcatgtaaataatttttcata
aattgtaAACTCCTATCCCTCATATTACCcgaatttatttaattttacgG
AAAAGCAAAATAATGTAGAATATTATTGAACATAATTGAATTTTATTGAC
TTATGTTTTAAGAGAAAAGATGAGTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029083-exon-sc0000724-1491911889:76980..77789 | TCONS_00029083-exon-sc0000724-1491911889:76980..77789 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1510915933:76980..77789 | TCONS_00029083-exon-sc0000724-1510915933:76980..77789 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1575043694:76980..77789 | TCONS_00029083-exon-sc0000724-1575043694:76980..77789 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1491911889:78371..78552 | TCONS_00029083-exon-sc0000724-1491911889:78371..78552 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1510915933:78371..78552 | TCONS_00029083-exon-sc0000724-1510915933:78371..78552 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1575043694:78371..78552 | TCONS_00029083-exon-sc0000724-1575043694:78371..78552 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1491911889:79161..79615 | TCONS_00029083-exon-sc0000724-1491911889:79161..79615 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1510915933:79161..79615 | TCONS_00029083-exon-sc0000724-1510915933:79161..79615 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1575043694:79161..79615 | TCONS_00029083-exon-sc0000724-1575043694:79161..79615 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1491911889:85901..87057 | TCONS_00029083-exon-sc0000724-1491911889:85901..87057 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1510915933:85901..87057 | TCONS_00029083-exon-sc0000724-1510915933:85901..87057 | Clytia hemisphaerica | exon |
| TCONS_00029083-exon-sc0000724-1575043694:85901..87057 | TCONS_00029083-exon-sc0000724-1575043694:85901..87057 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000724 | supercontig | sc0000724:76980..87057 + |
Blast
BLAST of TCONS_00029083 vs. Swiss-Prot (Human)
Match: OTP (Homeobox protein orthopedia OS=Homo sapiens GN=OTP PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.184e-25 Identity = 58/73 (79.45%), Postives = 65/73 (89.04%), Query Frame = 2
Query: 1316 RHRTRFSPAQLNELERYFSKTHYPDIFVREELAMRIGLTESRVQVWFQNRRAKWKKRKKTMSLFHHNNGLFPS 1534
RHRTRF+PAQLNELER F+KTHYPDIF+REELA+RIGLTESRVQVWFQNRRAKWKKRKKT ++F L P+
Sbjct: 106 RHRTRFTPAQLNELERSFAKTHYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPT 178
The following BLAST results are available for this feature:
|
