TCONS_00028889 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028889
Unique NameTCONS_00028889
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2471

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028889 ID=TCONS_00028889|Name=TCONS_00028889|organism=Clytia hemisphaerica|type=transcript|length=2471bp
tttaaattttagtggaatataaaataagaaataaaatgtTGAATAAAGAT
GTACCATTGAGACAACAAAGACACCCAAAATATCCAGACCCTTCACATGA
TGAAGTTCTTTGGAAAGATGCAAAAGTTGagACTTGGCGTTTTCATTGGA
GGAAGTTGTGCATTACTCTTAAAGAGATGAAGAGTTTGTCATTGAAAGAT
GAAGTATCCACACTCTCCAAGATAGTGTACAAACATCACAACCAGATGAA
ACGTGATAAGTCCTTTCAACTGCTTAAAAAGATCAGTACATTGTCACAGA
GATTTCAAACGATGGAATTATTTCCCCAACTGAACAAATATCAAGATATT
TTGAACAGCTTTTTGAAGAGGAAaGCCCTCATCAGCAACAAATTACTGAT
ACCAAAAGAAGAGTTCACCATTATCATCGTGGAACAATTATTAGGAGCCG
TCAAACTGCTTGAAAAGCTCCATTCTTTGATGATCAACTGTACaagGGCG
GTCGAAGGGCAACTAGGCTTTGGATTTTTTGTTAACTTCAATATGTTTGC
ATTGGCTTCTATCAGCAAGATATGGTCAGAGGTGAAGAGATATTTCAGCG
TTCTCTCGTCAGTTTATGATATCTTCCTTGAcatattacaagatattcac
GGAACCACCACCAAgGGTGTTTGGCCTGACTCTTTAAGAACTTGGATAGG
ACATAACTTTGAGAATTTCAAAATGagtaACTGCAGTTTTTGGAATGCAG
CAGGGAAAGAAGTTTTTTCATCGACGGCAAGTGCTAATCAACTTTCGTCC
AACAATTCACTTTCTCCATGTGCACCACCTTCTAAAGATGCCATGGATAT
TGGAGCGCCTCTTTCACCAAGTACGCTTGCAAAACTTCGCGGCCCACGTG
ACGAAACCGTGAAAGATGATTCGGAAATGCACGATGATGTTGATGATACA
AAGGATGTCGATCTAGGAGCACCATTATCGCCCTCCACGCTTTCGAAAAT
ACGTCTTCAAGGGAACGATAATGATGACGACGAAGCAGAAAAGAAGCCAA
CAGAACTAAAACACGAAGACAAAGTCTCCATATCTTCTGATCGAAAGTTT
GACGAAGAATCTAACGAGGTCTCTAACCAAGATGAAGAAATAAATCCTAC
TCACTCATATACTAGTGAACAGGGAAACGAAGAATCTGTCACTGAACAGG
AGAAATCATTTCAGCTTgaaatactttcaaaacaaccaaaaacatccAGG
GACACCGAAACAGAAACATCTAGGGACATCGAGACTGAAACATCTAGGGA
CACCGAAACAGAAACATCTAGGGACATCGAGACTGAAACATCTAGGGACA
CCGAGACTGAAACATCTAGGGACATCGAGACTGAAAAATCTAGGGACATC
GAGACTGAAACACCTAGGGACATCGAGACAGAAACACCTAGGGACATCGA
GGCAGAAACACCTATGGACATCGAGACGGATTGTCAAGTAGAATCATCGA
ATGTTTTGACCACAGAAGAAGAGATGACTGATCCGAAGACTTTGGATAGT
AACGAAACTGGAAAGAATGCATCAACAGAATATACAGATGGTGACGTAAT
CGAAATGAAAGATGACGTAACTGTTAGtgagaaaaatgacgtcatattgG
AAAATGATAGAACAATTGAATCATCGGATAATGAGACGATGAATAAATCA
ATCGAAGAAGAAATAACCGAATCTGCGATGAACGAAGTTGAAATTATCGA
TTCTAAAAGTGAAGGTACGATGATTGATGACGTAATCGATCATTCGAAAA
ATGACGTAAATACTGTTGAACTGTGCGAAACGGTCGAAATGGAAATACCT
ACCATTGATGACGTAATGACTGAATCAAAGGATGACGTAATTGTAGACTC
AGTAACCGATAAGAATAATGATATAATTATTGACTCAGAGGAAAATGATA
TTAATCTTGaaaattctccaaaaatgaCGTATTGGTCGAGAAAACAACCT
GAGAAAAAGCCTTGTCCTTTTTGTGGAAAGATGGTCAGAAATGTAAGGCC
TTCTTTGAACAGTGAGTTCTTAAAAACTTCTATTCGAATGCGAGGGAAAA
TACGGCTACAATCACGCGACAAGGGTCAATTAAAAGCTCATATTTACGAC
GTGAAACACGAACTGATTCATAGCGAAGGACTTGCAATGACCCGAAAATT
AATCCATATTTTGAGATGCTTGAAATTGACTTTAAAGAAGTTGGAGAAAC
CATAATAAACAATAAAGtaggaaatatttattttcttcccGATTGGTCCA
GCTTCTTTACTAGatattttttattgtaatttatGAACCTTTTTAGTTCA
AATACTCGTTGACGACATGTAAGAAAGTACTTTTTGATATTTCAGTTGTG
CGGTAAACTAGAGTGGGCTACGAAACACAAAAAACTTCCATGTGCGTAAT
AAACGGTGAGTCAAAATAAAC
Run BLAST on NCBI

transcript from alignment at sc0000714:87714..102679-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028889 ID=TCONS_00028889|Name=TCONS_00028889|organism=Clytia hemisphaerica|type=transcript|length=14966bp|location=Sequence derived from alignment at sc0000714:87714..102679- (Clytia hemisphaerica)
TTTAAATTTTAGTGGAATATAAAATAAGAAATAAAATGTTGAATAAAGAT
GTACCATTGAGACAACAAAGACACCCAAAATATCCAGACCCTTCACATGA
TGAAGTTCTTTGGAAAGATGCAAAAGTTGGTAAGACTTTATTATAAACTG
AGCTTGAAGTTTTATAAATTATTTGGAAATAACAGGGCGCTAGACAAAAT
TTCTTATACCCATTGATCTTAAGTCACTCTTGTCATTTTCATTTGTTCCA
TACGTGAAAAATCCTGAAAATCATTTTTCTTGGTCCAGCGTTTGGCCTTC
CATTAACATGTCGCTGTCCGTTCTTTTTCCGTTTTAGAAAAAGCAGCGCT
TTGTTATTTTAAGTTCATTTTGGAAGAAACGGCGCCTTGTAACTAATATT
GTCGCAGAGCCTTCATGAATCGTTGGCCGTTTTCTTTGTTGCATACATAA
TGAAACCATTTTAATTAGTTTATTTATTGAATTTTAGAGACTTGGCGTTT
TCATTGGAGGAAGTTGTGCATTACTCTTAAAGAGATGAAGAGTTTGTCAT
TGAAAGATGAAGTATCCACACTCTCCAAGATAGTGTACAAACATCACAAC
CAGATGAAACGTGATAAGTCCTTTCAACTGCTTAAAAAGGTATTGTGCTG
TTTAAGGATGGTGGTTACACGTACCATCCAGTTTGCAGAGTATGGCAAGG
CTGCACTCAAGAAGAAAGCGCAGCTGATAAATTTTGGTCCGGACAAGGTG
CACCTTTACCTTGGAAATTGGCCTAAAAAGGCAAAAAATTGCTAAAATTA
GCTGCACTTGAAGAGAAAATAGCGGAACTCTGCACTTGGGGTTACAAAAC
CGTCTGCACTTGCACCTGAAAACCTCAAATTTTGCACCTGAACTCGAATT
TTTCCGAGTTGTGCACAAAGTTGTGAGCAAACGTGCCACACTCTGCAAAC
TGGTGTACCATTTCACTTCGGGTTACCGCACTGAAGGGAAGTGTGATCAC
TTCGGTTTATTCACAACTCTCATATGTTGCTTACTCACGTGAAGTGAAGT
GAAAGGTCACTCCGATGTAATTCGATTTCGGTCAAAAAGACGATTTACTG
AATTCTTTGGGATGAGCTGGAGTTTTTACAAGATACTTCACTAATTGGTC
ATTTAATTTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAGATTCT
TTTATTAGTGAGGTTAAGTATACCAAGATAATCACGACGACGGACGAAAA
TGTAACAGGCTAGTGAAAATACGAAATTTGATTGGTTGAAACTCACTAGC
CTGTTAAATTTTCGTCCGTCGTCGTGATTAAAGCGATTTACTTAACCTCA
CTATTACATCTTAACGACCAACCAAATCAAATAAGAGCTTGTAAAAACTC
CAGCTTGTCCCAATTCTTTGTGCATTCTTCAGACTGGTAATTACTGAAAA
GTTCGTTATATATTTGATAATGAGATCTAAGCATAAGATGTAAAAATCAA
ACTTTCCCAGGCAAGAAAAAGTAAAGCCACTTATTTCCTCTCCAGAACGC
GCCTCGAACTCGCCACAATCATGACGACGGATTGTATCTAGTGTTTCCTT
TGTTTTCGAGGACTGTATTTCTTGAAATCTAGTGATATATTTTACTTACA
ATCCGGCGTTTGTGTAATAACCACGCGCGGGCGTTCTGGACGGGAAATAA
GTGCCTTCATTTCCCATCCATGAGTCTCGAGTCTAGCCCTTCGGGCTTGT
AAAGTCAATGGTGTTATTTGTTGTCCATCTTGTATTTATAGATCAGTACA
TTGTCACAGAGATTTCAAACGATGGAATTATTTCCCCAACTGAACAAATA
TCAAGATATTTTGAACAGCTTTTTGAAGAGGAAGTGAGTTGCTATTTTTG
GATGAATGATTACTTTATGATTGTGTGTTTTCAAAAAATTCGGCGTAATT
TTTTCATTTTACAGTAACTAAGTAATTTACATAACGTACTATAAGACTGG
AGAAGTCTAAAAATGCTTGAGACTAACTGCGATTTAGATGACTCTTAAGT
CCACGAACAGCGGGTTTGATGGCGATCTATATCCGTAGCGCAAGAATGTG
AGGTTAAAAGATCTATTACAGAAATGTTTTATTTTCAGAGCCCTCATCAG
CAACAAATTACTGATACCAAAAGAAGAGTTCACCATTATCATCGTGGAAC
AATTATTAGGAGCCGTCAAACTGCTTGAAAAGGTATTGCTGTTCTTATTT
ATTATGAAATCCAAAAGCTTCCTGTTCTATAACATACGAAAGTGGATCTG
GCAGGATTCCAGGCTTTAAATGTTCTTACTTTTTTCTTAAAATCTCATGC
TCTACTCATAATCATTTCTCTCGAAATCAAAATCAACTTTTGAAGATTGT
TGATTTTTACGCAGTTTCTTTCTCTTACATCTTTGCTTGTAGCGTCAGGC
TCTCGGCCATAATTTTTTTTGCCGGGCCTGTTTCGGTACCTTTTCTCAAA
ATAGTTTAAATACATTCTTCTTTCGAACGAGCCCAAGAAATCACTTAAGA
AAGTATTGTCACTAATGAGTAGCCCCTTATCACCTGACAAGGAAATTATC
CGTGAACAATTATTGAAGTAAAGTAACGTATGATATTTCTGAGGCCATAA
TAGACATTAAGGCTAGCAGCATAGATGAACTGTTTCGTAACTGACGAATT
AGTAAGTGATCCTGGACAATAAATTTAAGAAGGTGTTTTTAAATTTCAGC
TCCATTCTTTGATGATCAACTGTACAAGGTAAAATTTTGAATTTCTTGAT
GTGAAAAACTTTTAGTAGCAGATCAGTGTTTGTTGGTTTCTCCATCCCTC
CAATTCTTTAGACATCAATCTTGATCCACGTTGTTTGAGGATTATTTTTA
TAAAACTAATTTCTTCATCTGATTGCTATGAGAGACCCATACACCTATAT
TGAAGCCATCTTTCACCTCTTTTTGGGGCTCGTGAAGATCGTAGAAACCG
CTAGTGTCCGATCTAGCAAAACTTTTTGACAGTATTCGATACGGTTTTCC
ATTGCCGAGCCCTTTTTAGACATTGAATAATTTAACCCTTAGAACCTTAG
GATTTCAATGAAAAGTTGTCCCAATTACTCAATACCGAGGGTGTTTCAAG
GTACACGCTTTTTTTATAAGAATACACTTTATAAGAATGTCCATGATGAA
TGAAAATGGCCAAAAAATTAAGAATAATGCTATAAGAACATCACCATCAT
GGAATTTTGCTACTCAAGTTAAGAATGCCATTTTTAGAGCATTTTCAATT
ATAAATTGTCAATTACCCCCAAGTAAGGCTCACTCCTTTCACAAAAATGC
AATTTTATGAGACGTTTGTACTAAATGTTAAATCTAGTTTGAATTAGGAT
CCTAACTTAAGAATGCTGTAAGAATATTTTAGGATGATTTTCCCAAAAAA
GTTAAGAATATCCACGATGAAATGGATTTACACCATTCTTATAAAAAAAG
CGTGTAAGCGTCCCACTGTTGCGACTTTTAAAGGTCTTCCAAATTGCGCT
GTAAGGGTCGAAATGAAAGTAAGTGAATTCTAAGGGTGTGAAAAAAAAAC
GATGAAAACGAAGTTTTTTTGGGCAAAATTTTGGAAAATAAGACCACTTT
TTGCTTATAAAGAAAATGAACCTTAAGGATCGATCGAATGGATGTTTTCA
GATCGAGTGCAAGGCCCCCCTTCCCTACGTCAATATCAGCTTAAAGGTGT
GATCCGTGATGAGTTAGTGGGGTCAGACTTGACGCGAGGTCTGAGTACGC
CCCGATCGAGGAGGATAAACGTCTGATGGTCAGACGGTGCACCTACTCAT
CGTGGACCACGATGTAGTTCAACGATCCTTTCTCAACTCATCTGAACAGT
TTTGATTAGTTTTTCACTTGTGGTTTTGTAGACTGTTCATGTTTGTTCAT
TGAAACAAACTTTTCGATTGATTGGAAGTTTGTTCATTTCATAATTCCAT
CTGACCATTCATGTGAATTAAATTATGAATGATGGTTCTCGGAATTCTTT
TATATGAAAAAAATTTCTCTTTAAAAGAAGCATCGTATTTCTTTATCTTT
TTTGAAGTTCTGTTTGAACACAACTCACAACTCAATATAGATGTTCTAAA
GGGCATACCGGATAAGTGGGATGGGGGAACCTGGGAACCTAAAGTGGGAA
CCTAAATGAACACCTGAAAAGTGGGATGGGGGAACCTAAGTGGGAANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGGTGT
TCATTTAGGTTCCCACTTAGGTTCCCCCATCCCACTTTTCAGGTGTTCAT
TTAGGTTCCCACTTAGGTTCCCCCATCCCACTTTTCAGGTGTTCATTTGA
TTCCCACTTAGGTTCCCCCATCCCACTTTTCAGGTGTTCATTTAGGTTCC
CACTTTAGGTTCCCAGGTTCCCCCATCCCACTTATCCGGTATGCCGTTCT
AAAGAGTGGAGAGCGAAATTGAGAAAGTGAGTGAAACAGTTATCTTGACC
TCCGAGAATATTCTCATTACTCCGCGCATAGGAAGAAAATCTACTCGGAT
TGGCGGGCCGCTTGTATCTTTGCATCCAAACTTGGGATGGATATTGAATG
AGATTTGGTGCGTGCTGAATGGCTCAAACAATCGCATAAAACAAACGTCG
ATCATAAGCATCAACATTAGAACATTAGAACTAGGTTAGAAAAGAGCGAA
GTTTGCGCATACACGTTTTTTTTTATAAGGAACACGTTTATAAGGAACTC
GAGGCTGAAAATGGTTCAAAAAATAAGGAATTGTTAAGGAACTGCTCAGG
CTGAGAATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAACTCGAT
AAGGAACTTTGAGACTGAAATTCTCTGTAAAAATAAGGAACTCCAGGTTC
AGAGCAAAGTTAAGGTTCCTTATATAAAAAAAAAACGTGTAATGGATGAT
CTGTTACGAGTACGCTACAATCTAAGCAAGATGAAAACAAATTTTGCGTC
AGCTTTGGTTCTTCAAACTTTATTATCGAAAAATTAAAACTCAAACAAAA
GTTCTTTAAATGCGTATACGAAATAAATAAGTATTTTATTAGTTATACTC
ATTGAGTTTAAACCCTGATGGGTTAGGAGAGGGATCTTCAACCTTTCTCA
AGCAAGAAAAGTGAAATCTTATGATTTACACCGCCTTTGGAAAGGCGGAT
CGAATCTAAAGCTATATCTGTTTTTGTGCTGCATATTTTTCGAGATCTGA
CGATGGGTTTTCCTTTCAATCTTGCGTTTGTTTAAAGTATTTCAGATGCG
AAATAAATGGCTTCATTTCCATCGTTTCAACTGTTATGGATCTGCTCTTA
CTGATTTCTTTTCAAAACAAAAGCGTGTATACGATGATACTGTATCTTCT
TCAAATAAATTTCAGGGTTGCCTTTCCGGATTTGGGATGATGTTAAATGC
ACTTAAAGAGCTTTTGATTTGCTAAAGTAAAACAATCGCATGTCAATCAT
AAACATAAACATTAGAATCCATTCCTTTTCGCTTTCTTTTTCAAGCAAAT
GGTATGTTATTGCTGAAAAAGTTTGTCATTCGTCATTTTCTTTTCCGTTT
TAGGGCGGTCGAAGGGCAACTAGGCTTTGGATTTTTTGTTAACTTCAATA
TGTTTGCATTGGCTTCTATCAGCAAGATATGGTGAGTTATATTGAGCATC
AAGGCAAGCACGCTTGAAAATGATATAAATACTGTAGGATAAAATTTTGT
AAAATTACTTTTTCCATTGTTATAATTATTCCATATACATCACCGAGACA
GGGATGTTTGTTGTTACGAGAGGGAGGGAGGGCTATTTTTAAACCTTTAA
CTGCCGATGTCGGCATATGCCGACATGAGTATTTTCTATTTCTTTGCCGA
TGTCGGGATTTGCCGACATTGGCACTTTCCATTTCTTTGCCTCAAAATTT
AACACTTCTACAAAGATTTTGTATTAGATGGAGTCTGTTAAATGACGCGC
CTTACGCGCCTGAATTTCGACGCGCCTTTAAGTTTTGACGCACCTTCTTA
CGCGCCTTATTATCGAAGTGCCCTAAATTTTTGACGCGCCTTACTTACTT
GCCTTATTACTGACGCACCCTGAGGTTAAGTATCACTAGATAACTCAGGA
CGACGGACGAATTTTTGAAGCCTTCGTTCGTGCTACGGCACTTTTCTACA
GGCTAACCCGAAAGCTAGGCAGACATACCCCGGGCAAAAATATCGGATTT
GCTTTAGAACGAGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAG
CAAGTAAGGAATTGTGTTTAATGTCAGCATATTTATTTTTCTTATAAGCA
TCTTCTTTATAAGAAACCAATCAATAACTTTTGATTTAAGGGAATTAGCT
TTCGGTAATAACTTTTTTCATTAATCAAACATAGCATACTTGTTTTTACA
AGCATCATTTTCGTAACAAAACTTTCAATTAGTTTCCTTCAATCTGAATC
TCCTATTATAATTCCTAACAATTTTTCTTTAATTATGTGGTAAGTTTTGT
CAAGTAGTATTAATTTCCAAATTAATTTGTCTGATTTATATTTCCCTTAT
ATTGTTAACAAAATTGTTGAATTTTTTTCCAAGGGTGGGTGGGTTCTTGT
TGGTTGATCTATTCGATTGGTAACAAGGTCGATTTTTAGCTTAATCATGA
TGATGTGTGCCTGTGGTCGTCAAAGATAATCGGACAACATGGAACATAAA
TTCATAAATGAAACTCCTAGGTACTAGAATATTTTCATTCAAAAAATCCA
TGAAGAAAATCNCATAAATTTCATAAATGAAACTCCTACTAGAATATTTT
CATTCGAAAAATCCATGAAGAAAATCATACAATATAAATTCAGGGTTTGA
TTGAGGTCGAAGAAGTAAAATATTCAACAAAATAAAGTTTGGACTCGTAA
CACTTTTTTCAATTATCTTTACAGAGGCACTATTGATAATAAAAAGTAGC
CCATAAAACACCTAAAAGAACAGTACAATGACTGTCAATATAACACACTG
AGAATCCAACCAGAAAATGAAATATTGATAAAACCATGTGTCATTGAGTC
TATAAATAAATTTTTTAAAGTTTTTTTGATAAATATGATAAATGATAAAG
AAATAAAATCACTTCTGTCTCATAGAGAATGCTAAAAAATTTGGATTAGA
AATCAGAAAAAAATGAAATGAACCGCCGTTGTTGTCGTCTTTTTTTCTGA
ATATTTTTTGCAGAACATTCGCCTTTCATGTGCCGGGGGGCAATAAAAAT
CACGTCAAAATTTACAAAAATTTAAGGTAGTAATACTGTAAGGCACGTCA
AAAATTTAAGGCGCGTTGATAATAAGGCACGTAAGAGGGCGCGTCAAAAT
TCAGGTGCGTAGGGCGCGTGGGCGCGTCAATAAATGGAAGGCGCGTGGGC
GCGTAAGGTGCGTCATTTAACAGACTCTATTAGATGGTTTGAAATGAAAA
AAGATAATAGTTAAAAGCTTTTCTATGTTGAAAAATAACTATTCAACAAT
GTTCAACTCAAAGTTATAGTCCTTGGCTGATACTTCATATATTATTCAGA
AAATGAAGTCAAATCGCTACCTTTTGCCCATGTCGGCATATGCCGACATC
TGGAAAATAGGTCGAACCTTCTTTTTTTCCCGTGGCAAATAGGTCGAACC
TTAAAAAATACGAACGGCAGTTAAAGGGTTAAGAAGGATTTTCCAGCATC
AAGAACATATTTGATGCTTCTTCATTATATGGATTGTTTTTTTACAGGTC
AGAGGTGAAGAGATATTTCAGCGTTCTCTCGTCAGTTTATGATATCTTCC
TTGACATATTACAAGATATTCACGGAACCACCACCAAGGTATAGAAAAAA
AAATTATCTCTTAGACGCATTAGTCACTCTTATATAACGGGCTGTCTTGG
TTTTTTATATCTTATGATAATTGAGATTAAAACTTGATGTTTTTATAACA
TTTCCTTCTTACAGACATTTATTAACTGGTTGAAGTAAAAGCCGGTCAAT
ACAAGAAAATACGCTATTTTGATTGGTTCTCTAGCGGTCAATATAATACG
GTAAAGACCGCTTCAGTGCTTTGGTCAAACTGACGATGATTTTGAAAAAG
GAAATTTGTTTTATAGAAAAGTTTCGTCCGTTTGAACACGATTTAAAAAA
CTGACGTTGCAACGACTTCTCATAAGAAAGGGACGTCAGAATAAATCAAA
GAAAATATTGGGTAAAAAAGAAACGAAAAAATCATGGAAAATGAGTGGAA
AATGCATTTTTTGGCCAGAAACACACAAAGAATGTTCACCAGTTAATAAA
CACAATAATATAACTGTTTTCTTGGTCAATACGTAAAATATTGACCTTAT
ACTGCGCACAGACCTCGCAAGCTCGGTCTGTACTTCGGCTGCGGTCAATA
TTTTACCGTATTGACCTCCAAACCAGTTATTATTGTATTAATAAATATCA
TTGACCTCGTATGAAAATTCATAGTTATGAATAGTTATGTAGGTTTTAAA
TAACTATATGCACGTGATTTTGCAAAACAATAAATTGCTTTGATATGGAA
TTTTTTTATCATTCTTTTGATCAGGGTGTTTGGCCTGACTCTTTAAGAAC
TTGGATAGGACATAACTTTGAGAATTTCAAAATGAGGTAAAATTTATTTT
AATACGCTCAGAAAACTGATAAGAAAGGTTTGACCGTAGGAGTATACAGA
GTTTAGTACGAAGCGAAAAATGGATCTCGTAAATTTCGGAAAGAATTTGT
TCAATAGAATGACGAGGTGGGTAGGTTCGAATATCAGGGATGATGGGAAT
CAGCTTTAAATTGGGAAGCGCTCCAGGCTAACCATTTTAAGATATACCGT
AACATTAGAACTGTAATTCGACCTTTCTGTGTTGCTAAGAAATTGTAGCT
ATAACTAAAACCTTTAGCTACGACTAAACCTTGCATCTTATTTTTTTGTA
TTTTTTAGTAACTGCAGTTTTTGGAATGCAGCAGGGAAAGAAGGTATCAT
ACTTTTTTCATGTTCAATTATTCTTTTTTGAAATGATGAAACCACGCGTA
TTTTGCCCAGATTTTTGACATCCGTCATTTTAAATTTGGATCTAATGCTG
TAATCTCCCGAGAAGAACGTAGAACCCACGTTAAGTGTTGGCTTTTTTAT
TTAACAAACTTAAATCCTTCAAAATGTTTTTCTATGAAGATCTTGAAAGA
GTAAGAAAAAATTATTTACCATAATTTCTCTTCACTAGTTTTTTCATCGA
CGGCAAGTGCTAATCAACTTTCGTCCAACAATTCACTTTCTCCATGTGCA
CCACCTTCTAAAGATGCCATGGATATTGGAGGTTTGAATCTATTTTACCT
CAATTGATTGTCAAATCAACTGTCTACCAGCTAAATTAAAAAACTCCCTT
CCATTACAAGCCCGGTAGGACCTGGAAAAATGACCCAACCCACGAAAAGC
AAGATATTTTCAAACACAATCACACTTAGCCTGGGCTAGGAGCTGTTTGG
GTAAAAAGATTTACTCCTTCACTTTTTTGATTCCCATTATTTTTTTAGAG
CCTAGTTTCTTTCTTAGGGATATCCAGTACCGTGTAGGGTTCTATTTTTC
AAACCTCAATAGCACCATCCCTTTTGGTATACCCTAGTATCCCCCGGAAC
ACTTTGCTCCTTTATTTCACCTCGGTTTGCTGCAGACTGTTGAAGAGTGC
ACAATGCTTTAAACTCAAACCATTATTGAGAGGCGGAAACCAACATTTAA
ATAGAATTCTGAAGAGGAGCTACGAGGTTTTTTCAAAAGTTTCAAATCCA
ATAATGCCTTTTTGAATTTATTGATTGACTGTTTTTTTAGACATCCACTA
TAAATCTTTCCCATTTATTGCGGCTCCTCTTTCTTCATTTTCGGAACTCC
ATCAAATCGATCTACTGGACGTCAAACATATAAACGGCGAAACGGATGTA
GGAGGTATGAAGAAGTATAGAACTTCCTCTTGATACCTGCGCCTTTTCAG
GATTTCGCCTTTTTTGCTCCAANAGAAGTATAGAACTTCTTCTTGATACC
TGCGCCTTTTCAGGATTTCACCTTTTTTGTTCCAGCTGAAAAATAACCAA
TAAAGATTTTTGGTAATTCCATTTATGCTTCCAGAGTATTTAAGGAGGTC
GAAGTCAGGAAAGTGGTTTGGTTCTAATGATACATGTGTTACATCATCTA
TCGCATTAACCTTAAGCTCCTTCTCACTCGTTATAGCGCCTCTTTCACCA
AGTACGCTTGCAAAACTTCGCGGCCCACGTGACGAAACCGTGAAAGATGA
TTCGGAAATGCACGATGATGTTGATGATACAAAGGATGTCGATCTAGGAG
GTAGGCGAACAACAATATAAAAAACAGTGTTTCATTAAGGAGAATTTCAA
CATTCAAATGGTTTTGTCAAAACTGTAATTGTGTCATTATTTTGACCAAT
ACTATCCTTCATCCGCCAAATTAGATTCCTGGCAAAATTTGTTCCTTTAA
GGTATCCCACAGGATCAATTTAAAAAAATGGTTTCTTTCTTTAGCACCAT
TATCGCCCTCCACGCTTTCGAAAATACGTCTTCAAGGGAACGATAATGAT
GACGACGAAGCAGAAAAGAAGCCAACAGAACTAAAACACGAAGACAAAGT
CTCCATATCTTCTGATCGAAAGTTTGACGAAGAATCTAACGAGGTCTCTA
ACCAAGATGAAGAAATAAATCCTACTCACTCATATACTAGTGAACAGGGA
AACGAAGAATCTGTCACTGAACAGGAGAAATCATTTCAGCTTGAAATACT
TTCAAAACAACCAAAAACATCCAGGGACACCGAAACAGAAACATCTAGGG
ACATCGAGACTGAAACATCTAGGGACACCGAAACAGAAACATCTAGGGAC
ATCGAGACTGAAACATCTAGGGACACCGAGACTGAAACATCTAGGGACAT
CGAGACTGAAAAATCTAGGGACATCGAGACTGAAACACCTAGGGACATCG
AGACAGAAACACCTAGGGACATCGAGACAGAAACACCTAGGGATATCGAG
ATAGAAACATCTAGGGACACCGAGACTGAAACATCTAGGGACATCGAGAC
AGAAACACCTAGGGACATCGAGATAGAAACACCTAGGGACATCGAGGCAG
AAACACCTATGGACATCGAGACGGATTGTCAAGTAGAATCATCGAATGTT
TTGACCACAGAAGAAGAGATGACTGATCCGAAGACTTTGGATAGTAACGA
AACTGGAAAGAATGCATCAACAGAATATACAGATGGTGACGTAATCGAAA
TGAAAGATGACGTAACTGTTAGTGAGAAAAATGACGTCATATTGGAAAAT
GATAGAACAATTGAATCATCGGATAATGAGACGATGAATAAATCAATCGA
AGAAGAAATAACCGAATCTGCGATGAACGAAGTTGAAATTATCGATTCTA
AAAGTGAAGGTACGATGATTGATGACGTAATCGATCATTCGAAAAATGAC
GTAAATACTGTTGAACTGTGCGAAACGGTCGAAATGGAAATACCTACCAT
TGATGACGTAATGACTGAATCAAAGGATGACGTAATTGTAGACTCAGTAA
CCGATAAGAATAATGATATAATTATTGACTCAGAGGAAAATGATATTAAT
CTTGAAAATTCTCCAAAAATGACGTATTGGTCGAGAAAACAACCTGAGAA
AAAGCCTTGTCCTTTTTGTGGAAAGATGGTCAGAAATGTAAGGCCTTCTT
TGAACAGTGAGTTCTTAAAAACTTCTATTCGAATGCGAGGGAAAATACGG
CTACAATCACGCGACAAGGGTCAATTAAAAGCTCATATTTACGACGTGAA
ACACGAACTGATTCATAGCGAAGGACTTGCAATGACCCGAAAATTAATCC
ATATTTTGAGATGCTTGAAATTGACTTTAAAGAAGTTGGAGAAACCATAA
TAAACAATAAAGTAGGAAATATTTATTTTCTTCCCGATTGGTCCAGCTTC
TTTACTAGATATTTTTTATTGTAATTTATGAACCTTTTTAGTTCAAATAC
TCGTTGACGACATGTAAGAAAGTACTTTTTGATATTTCAGTTGTGCGGTA
AACTAGAGTGGGCTACGAAACACAAAAAACTTCCATGTGCGTAATAAACG
GTGAGTCAAAATAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016401XLOC_016401Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028889-exon-sc0000714-1575043694:102551..102679TCONS_00028889-exon-sc0000714-1575043694:102551..102679Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:102041..102192TCONS_00028889-exon-sc0000714-1575043694:102041..102192Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:100797..100888TCONS_00028889-exon-sc0000714-1575043694:100797..100888Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:100448..100541TCONS_00028889-exon-sc0000714-1575043694:100448..100541Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:99902..99930TCONS_00028889-exon-sc0000714-1575043694:99902..99930Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:94399..94476TCONS_00028889-exon-sc0000714-1575043694:94399..94476Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:92042..92132TCONS_00028889-exon-sc0000714-1575043694:92042..92132Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:91244..91305TCONS_00028889-exon-sc0000714-1575043694:91244..91305Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:90887..90921TCONS_00028889-exon-sc0000714-1575043694:90887..90921Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:90549..90641TCONS_00028889-exon-sc0000714-1575043694:90549..90641Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:89530..89643TCONS_00028889-exon-sc0000714-1575043694:89530..89643Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:88860..89335TCONS_00028889-exon-sc0000714-1575043694:88860..89335Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1575043694:87714..88739TCONS_00028889-exon-sc0000714-1575043694:87714..88739Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:102551..102679TCONS_00028889-exon-sc0000714-1510915933:102551..102679Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:102041..102192TCONS_00028889-exon-sc0000714-1510915933:102041..102192Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:100797..100888TCONS_00028889-exon-sc0000714-1510915933:100797..100888Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:100448..100541TCONS_00028889-exon-sc0000714-1510915933:100448..100541Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:99902..99930TCONS_00028889-exon-sc0000714-1510915933:99902..99930Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:94399..94476TCONS_00028889-exon-sc0000714-1510915933:94399..94476Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:92042..92132TCONS_00028889-exon-sc0000714-1510915933:92042..92132Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:91244..91305TCONS_00028889-exon-sc0000714-1510915933:91244..91305Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:90887..90921TCONS_00028889-exon-sc0000714-1510915933:90887..90921Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:90549..90641TCONS_00028889-exon-sc0000714-1510915933:90549..90641Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:89530..89643TCONS_00028889-exon-sc0000714-1510915933:89530..89643Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:88860..89335TCONS_00028889-exon-sc0000714-1510915933:88860..89335Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1510915933:87714..88739TCONS_00028889-exon-sc0000714-1510915933:87714..88739Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:102551..102679TCONS_00028889-exon-sc0000714-1491911889:102551..102679Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:102041..102192TCONS_00028889-exon-sc0000714-1491911889:102041..102192Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:100797..100888TCONS_00028889-exon-sc0000714-1491911889:100797..100888Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:100448..100541TCONS_00028889-exon-sc0000714-1491911889:100448..100541Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:99902..99930TCONS_00028889-exon-sc0000714-1491911889:99902..99930Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:94399..94476TCONS_00028889-exon-sc0000714-1491911889:94399..94476Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:92042..92132TCONS_00028889-exon-sc0000714-1491911889:92042..92132Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:91244..91305TCONS_00028889-exon-sc0000714-1491911889:91244..91305Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:90887..90921TCONS_00028889-exon-sc0000714-1491911889:90887..90921Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:90549..90641TCONS_00028889-exon-sc0000714-1491911889:90549..90641Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:89530..89643TCONS_00028889-exon-sc0000714-1491911889:89530..89643Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:88860..89335TCONS_00028889-exon-sc0000714-1491911889:88860..89335Clytia hemisphaericaexon
TCONS_00028889-exon-sc0000714-1491911889:87714..88739TCONS_00028889-exon-sc0000714-1491911889:87714..88739Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000714supercontigsc0000714:87714..102679 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	7.98834e-06	0	1.18654	0.000296622	0.000794094	0.000274927	1.12917	0.232706	0	3.49718e-06	0.0564404	8.11095e-07	0.252641	1.01782	0.104929	0	8.30202e-08	0	0	0	0	4.18441e-10	0.00175126	2.63569	0	3.88652e-07	0	0.000172441
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028889 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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