TCONS_00028883 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028883
Unique NameTCONS_00028883
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1704

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028883 ID=TCONS_00028883|Name=TCONS_00028883|organism=Clytia hemisphaerica|type=transcript|length=1704bp
GATTCGAGAAGGAAGTCTGACCACAGCTCGAAAATATTACTAAACGCGAG
GGAAACAAAAAACATCGTCCCGCAAATTACATCGCTGGCGAAGGAATAGA
CAAAATCCTCCATTNGAGAAGGAAGTCTGACCACAGCTCGAAAATATTAC
TAAACGCGAGGGAAACAAAAAACATCGTCCCGCAAATTACATCGCTGGCG
AAGGAATAGACAAAATCCACCATTTTTCCTCCATCAAGAAAGTTAtttat
catcattttttttGCACTACCCTAAACAGATTTTATTGCCCTAAATACTT
ACACACAACATGGCTGATTCTGAAATCAATATTGACAGTCTGATCTCACG
ACTCTTGGAAGCTCGTGGCAGACCAGGAAAAACAGTTCAAATGACAGAGG
CTGAGGTCAAAGGGCTTTGCATGAAATCAAGAGAACTTTTCCTCAGTCAG
CCCATTTTACTGGAACTTGAAGCTCCCTTAAAGATTTGCGGTGATATACA
TGGACAATATTCCGATTTATTACGTCTTTTCGAATACGGAGGATTCCCTC
CAGAAGCCAACTACTTATTCTTGGGTGATTACGTGGACAGAGGAAAACAA
TCTTTGGAAACCATCTGTTTATTACTGGCATACAAAATCAAATATCCTGA
AAACTTTTTCTTGTTAAGAGGAAACCATGAATGTGCCAGTATTAACAGAA
TCTACGGCTTTTATGACGAATGTAAAAGACGATTCAGTATCAAATTATGG
AAGACGTTCACAGATTGCTTCAATTGTTTACCCATCGCAGCTATCGTCga
cgaaaaaattttctgttgtcACGGAGGACTTTCACCCGATTTACAATCCA
TGGAACAAATTCGACGAATCATGAGACCAACCGACGTCCCTGATGCAGGT
TTACTTTGCGATTTATTATGGTCTGATCCCGATAAAGAAATCACAGGATG
GGGAGAAAATGATCGTGGTGTCTCATTCACATTCGGTGCCGATGTTGTCG
GCAAATTCTTAAATAGACACGACCTCGATCTCATATGCAGGGCTCACCAG
GTCGTTGAAGACGGATATGAATTTTTCGCTAAACGCCAATTGGTTACACT
CTTCTCTGCACCCAACTACTGTGGTGAATTTGATAACGCGGGTGGTATGA
TGAGTGTGGACGACACCCTGATGTGTTCTTTCCAGATCCTGAAACCGGCA
GAGAAGAAAGCGAAATACCAATATAGTGGTTTGAACACTGGGCGCCCTAT
TACGCCACCACGCAACCAAAACAGTAAAGGGAAAGACAACAAGGGGAAAA
GATGAGGACCTTTAGAAACAAATAAAATGAGTGAGAGAAAACAACATTAT
TCTTTGATACTGTGCATTCGCGGTCGATAGATCTAATGTCAAGTTGACAA
AACCAGACTTCATCTTTGNGCCCAGTCGATAGATCTAAAGTAATGTCAAG
TTGACAAAACCAGACTTCATCTTTGAGAGGGAAAGAATGAAATGACACTC
GCAATTTTTCGGTCAATAAAGACTTTGTATCATGTACATAAAATGTGGAC
ACCCTTTAAAAATCATCGATCTgtgatttatttgtttttatattatataa
tcTGTAATTTTGTCAATCATTTTAGGttcaaaaatgtttgtttatcttAA
AATACCGTAACTTTCTTTTTATACAAATGTACAGAAAATTAAGTAATCAC
TTCC
Run BLAST on NCBI

protein sequence of TCONS_00028883-protein

>TCONS_00028883-protein ID=TCONS_00028883-protein|Name=TCONS_00028883-protein|organism=Clytia hemisphaerica|type=polypeptide|length=331bp
MADSEINIDSLISRLLEARGRPGKTVQMTEAEVKGLCMKSRELFLSQPIL
LELEAPLKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLE
TICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTF
TDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDAGLLC
DLLWSDPDKEITGWGENDRGVSFTFGADVVGKFLNRHDLDLICRAHQVVE
DGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDDTLMCSFQILKPAEKK
AKYQYSGLNTGRPITPPRNQNSKGKDNKGKR
Run BLAST on NCBI

transcript from alignment at sc0000714:124542..135209+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028883 ID=TCONS_00028883|Name=TCONS_00028883|organism=Clytia hemisphaerica|type=transcript|length=10668bp|location=Sequence derived from alignment at sc0000714:124542..135209+ (Clytia hemisphaerica)
GATTCGAGAAGGAAGTCTGACCACAGCTCGAAAATATTACTAAACGCGAG
GGAAACAAAAAACATCGTCCCGCAAATTACATCGCTGGCGAAGGAATAGA
CAAAATCCTCCATTNGAGAAGGAAGTCTGACCACAGCTCGAAAATATTAC
TAAACGCGAGGGAAACAAAAAACATCGTCCCGCAAATTACATCGCTGGCG
AAGGAATAGACAAAATCCACCATTTTTCCTCCATCAAGAAAGTTAtttat
catcattttttttGCACTACCCTAAACAGATTTTATTGCCCTAAATACTT
ACACACAACATGGCTGATTCTGAAATCAATATTGACAGTCTGATCTCACG
ACTCTTGGAAGGTAAGATAAAGCTATTTTTTTATTCAGTGTTTATTACAA
AAAGTTAGtttctaacattttttttatagttttcgCTTTAAGCTCCTGTT
AGCTTCTCTTCTCTCTCTTTCTATCAATATTGTTTCAGAACCCTTTTAAA
TTTGATGTCAACGAAAGTAGAAACTCATTGATTTTAGATCTTATTAGTTT
GATTGCAGACATCGAATATATACCATGAAgacgggtaacttgcatcagtg
gaggctaacttgcatagccctcaaatgactgacttATCAAAGCACCCAAT
TTTCAatacaaatgaactacgcagctctggttgcagctctactctaccat
tttttttttgatttaactttaagTATTTTAAGGagcagccaggtcattca
tttgacagggctatgcatgttagcctccactgggccattccagaatttgt
ctgtaacaggggggcggacaacacaggatttccgagggcaaaagttttca
ccaaaattcaaagtttccaaggtgagagaagaaaatgtatgaatttccaa
ggcaattgaattaaaaaagacaaaaaagagtggaatttccgatgcatttt
gcaaaagttcatggatttttatcgaactttccgaccaccactggaaaaga
aaaattatctctaaggctagaaaaaatttaaaaatgcacgtcgtccgacg
agggggtaacaaaaattttctggaatggcccactgatgcaagttacccgc
cTTCACGGTATAGTATTGCAACTTCTCCATCTGTTGTAGACGTAAACCAC
CCAGTGAGATTCTTTACTACGATTTCCATCCTAAGTTATGAACCTTGgaa
gaagaaattttataaaaaatctatGCCTAAGTCCTAAGTTTTATCGTTGC
TATTGCGTTTGATTGCATTCCATCAGGATGAATTGATTCACTCATTGATT
CTGTTTGATTgaaatacacctttcctgtaTTTCCAACCTCTCAGAAATAG
CCCTGAAAAATGTGTGTTCCACAACTGCTAtatgaaaatagtttttttag
aGAACGGCCACAACCTATTCAATAACTGATTACTCCACAACAGTTACGTA
GAGACAGACAGCCTTTCAAATTCAGTTTCTTTGCATTTGTGTCGGCAATA
GCCGAAGGTCGACGCAAATTAGAATGGTTGCAAGATAATTTATTATGTTT
CTATTGGGCCATTttagaatttgtctgtaacagggtgGCGGACGACAAGG
ATTTCTGAGGgcatttcaccaaaattcaaaatttccaaggcgagagaaaa
aatctatgaatttccaaggcaattgattTAAAAACGGCAAAATAGAGTGG
AAATTCCGGCACATTTTGCGAAAGTACATAGATTTTACCAttggaatttc
cgaccaccactggaaaaaaatttcagaggctagaaaaaatttattcaata
gGCCAttgcgttctccaaaacaactatagtTTTGGAGGTATATAAACGGA
TGCGTTTTTGCCTGTCATGAGAAGCAAGGGGTAAGGGAAAGTGAATTTTC
AGCTTCAACTTTTGATAACGATCTTctttttcagggtggtataatatcat
gaatagaaaaaactatataaataTGAGAGGAATCTGCTTCGCAGAACTCC
AGAAAAGCcaaaaaagtaccaactttccctaaggaagGTGTATTGTCCAG
TTAGCTATTTTATGAAGTGtatggggccgtccacatagtacgtacgcact
aaaatgtcgaaaattgaGTACCCCCTCACCTGtacgtacgcaaatggcta
taccccctctggtaagtacgtactttttcattcaccccccTCCCCTtcag
ttgaagaaaattttgaattgaaattgtttggttgggacctttatttcata
catgaaactcaatgtttatcaagaaactttttcttttccttgatgcgtat
aacaaGGGTATaagtcgacaaaaaaaacaagcgaaaaagggctatgaaaa
aattttctctgcgtacgtacatttttctttgacccctcccctccccctgt
acgcaagcacatgcttttgagaagaccccccccccttagtgcgtacgtac
tatgtggacggcccctatcCCTCTTTTTAAAAGTACTAAACAGAGCAGGC
CAAATTCTAAAAAAGCAGGGCAAGAACCAgaccaaaaagggcacttttaa
aaatcacctcaacatacaaagttctaaaattataaagCTCGTAGCGTCAG
TCTGGGTTTAGGTCTGGGCTAGGTTTaggctgagttttaagtccccccaa
agattcatgaaatttttggGTAGCCCCCAGGGCTTTTGACCCTCAACAGT
TCCACAAAAAGAGGgttaggctggacttaaaaaattgttggtttgccgtc
acccgaccgaccctacctcgaaacctgccgacccaacaaattttattgcc
attttaaagttaaacttcaaacaataaaaaatcaaaactcgtatcttgtt
tgtctcaagcagaagaatcgtaaattccctgctagcacttctgcttttta
ttcaaaactacctaaatgtaaacaaactgttaacccttccatggaaccga
ccgacccacctccaaaatctagggtcgggtgacggcaaaccaacaatttt
ttaagcccagccttATTCAATGTAAGCTGTGTTGTTGCAGTTCAAAGGCT
AAGATGAAATACTTTGCtcattttatataaaatattgcGCCGCagacaaa
aaattttcagcttcaTGAGCCTTAATTagagtaattgaagccaacatTAA
ACATCTTTAGCCTCCACCTttttcaggctttttggagGATGTAACCCCCT
TCATCATGCTATGGTCTATGGCATATTgtgtgcaggtagattagtctgat
acAGAATGTTTGAAACAGTGTGTGTGTGAACcctgttgacagactttctg
tactttggaaacccaggcagacacgcACAATAAACTCAACTTACCACTAA
AAAccaatcaaaacatcagccacatgtatttaagCTTCCAGTCAACAGCC
CTTTTGTTTATATGAATCTATGTTCCATTTTCAtataatttccttttttc
tgccaagccagctttttccataaattatgtgcgcacatcgaaattatcaa
aatgagGGCAAAAGTTCTGGTTAGCAATACAGCTTaataaacaagcagca
aaaatatcataaactagactgggAACAAAGTAttacgcttggattcccag
gttAAGAAAAAGGCTGTAGTTGGGTGAAAATGATTATTGCcaatcttttc
attttcaaaaatcttcctGTTAAGTGACCGAAAAGCTGTAAACCAGCAAC
AAAAGCATCAAAAACTAGATCATGAACCAAGTTTACCACTTGGATTCCCA
AGCTATGTCTTTAGAAAGCTTGttggaaaattcttcaaatttcaataaat
cGTTGCTTGAAAATAAGAAAGGTGTAaaccattttttttgaaaattgagt
taCTGATACCGTTGTATTAAAgagttttatcaattttttggaGCAAAAAA
GGCGTATGTCAAAGGCTTTTCATTATGAACTTACTTCAAAGCtaaatttt
tgtccaaaaataatggaatcaaaaatttgaaaaaagaaagccatttgtca
aaatatttttgaaattttgctgaattttgCCTATGATTACTTAGCCGGTC
AATAGTATGctcagaaaatatttgaatcaaAAGAGCGGCAAGTCAATTTT
GTGACATTCAATGGCATATTttggctatttagagcaaaataagggacatC
TGTATCTAGAAAGGCAAGACAGCATCCGTTAGAAGTCAAAAGGGGCActt
tttgtaatgtttttcttcaaaaagggaTGTTTTTAGCACAATTTAATCAC
TTTGAGAGGGACAGTGTCTGGTTTAAAAGGTATGAAAAATTGTCTGAGGG
TTCCTCTTCTTCTTTTGatagctaaaaatattttaaaatatgcTTGTAAC
ATTAATTTATTTAGTAGTTATTTAGCTGAAATACTGTTTGCTCCACAAAA
TAATCACAAATTCTAATTAAGATTTATAACCTTTTTGTATCAGAAAAAGA
AAGACTGAATTAAATCGTTAAGTCGAAAGTTATCAAAAGAAGACTTtgta
aaatgttcaaaaatggtaaaattaaaTCCTTTGATATAATGTCCAGATTT
CAGTTCAAAGCCTAGTAAAGAAGAGAATGGCATCTCCAGTTTATATTACC
CTACCCTTGGTTTTCCCTCTTTTTAGAAATATAATATATAGTACCCCTCA
AAATCAACATTCACTTATTATATTAATTTATATTCGATTTTTGGGTCAGG
GACGGGGTTGCTTAGCGTTCTaactcattttctgaaaaatttgttttggc
CACCTCtgatattatactatatttttgtttgttGGATCAAGGGCTAGATC
GTTTGCCTtggttagattatctaaaaagcttttactttatgAGATAATGA
AAAAATCTGCTAGTTTCACCCCAATTAACCTGGATGTTTATAAAAAAGCA
CGTGTATTGAATTTTGAGCAGTAAGAAATTCGTTATTGGGACACTCAAAT
ACAGCTATTTAGTTTTTGAATAGGTCTTATGGAgtttttgtttttcgaaa
aaagcgatgcattagAATGCAATAGAAAGCTCGTAGGAATTCTAATACcg
ccgaaacaatcccacattGTACcactgttttagaaaaataaaaaactctg
ataaggtctATATTGCTTTCAGATTGACATCATGTTATAGCAGGATCTGA
AAAAATTTAATGGTTTTGAAAAATGGCTGTATTTCATTTATAgtaatata
tttcgcaggtctatcgacctctatgaaataatcatatttaacaTTTTGTA
GGCGCACAGTTGGCCTCTAATCAGTCGTCTTTACAATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AATCTCGTTCATGAAGCAGTTGTCAGGGGTGCAGAATCcattattttgtt
gaatttcgattttttttggtatttctttagttttcgccattttgatgcat
ttcgacaagcacaaccagccagaaaaaaatttgacgtcaaaatgacgtca
tgttatttcattgttttttttttacatagtaTAGTATTGTTAACACTTTT
GCGCATTAATTTTTTGTATTGATCCAACTTTTCATCATAAGATTTCTCAT
TTCTGTTGAATATAAAactgttgaaaaaaatttttttttaatgcatTGCA
GTTTTCCTGGGAGCATCAGTTTTGCTTACACTGATAaccttaattttgaa
aaaatgcactatTGTTCAATCACCTTCTTTCTGACACTTAAGCCAGTGAT
GTTCGTAAGTGTAACAATTTCTGTATCAATGTTTTTGACTACTTACATTA
CAAGATTGGGAACATTATTGCtttatttaatgattatttctttacttttt
ctAGCTCGTGGCAGACCAGGAAAAACAGTTCAAATGACAGAGGCTGAGGT
CAAAGGGCTTTGCATGAAATCAAGAGAACTTTTCCTCAGTCAGCCCATTT
TACTGGAACTTGAAGCTCCCTTAAAGATTTGCGGTGAGTTTTCCCTTCCC
ACTACATGAAACATAGATTTGTAAATTGACGATGACATAACAAGATTGCA
AGCGTCATCACTTATAATATTTTAACAGATTTGATTTAAGTTATGTTAAg
ctcatttttgtttttgaaattatttttaagtGTTATGTAATCTAGATGTC
TAAATCTATAGCTAACTTTTCCAAAAGCCTGGTATTATTTCAATAGGACG
TGCGCGATTGCGCTCACGCTTAGTAAAGCGCTCATCAATCTCGTATGGTG
AGCAGAAAAATGCGCGTGTCAATTATATTATGATTCTGTAAAAAGACTTG
TAAAAGGCGTTTTCTATGAAATTGCGCGCGCTAATAATGATTGACGAGCg
cgattttgtaaaaatttcgcGCGCCTTATCTTTATTACTCGGAGGTTTTG
TCACTCTCCTACTTAtttcttcctggaaaagccTGGTTGCCATGGCTTTA
TGGAGACATCATTCATAACTTATCTTCTACCATTATAAAAACAGTATCCC
ATCACCTCCAAAGCGCTAGAAATCCTATGTTAATTTTACTTTGTCAGCTT
CTCTAAGAGGAGTGTCTGGTTCAAAGATCGAGAAAGTTAACTTTTACTGA
CGCAGTTAGCAGGGACACTGGGCTTTTCATAGTGACCTGGAGACTGCCAT
GCGCGACCGCGATTCTTGACGCCAGAGGGTAGAATCCATCATCTCGACCG
CGGTCGAAAAATGATGATGATATCATCAACTTAATAATCACTACTTTATC
TTTTCAGGTGATATACATGGACAATATTCCGATTTATTACGTCTTTTCGA
ATACGGAGGATTCCCTCCAGAAGCCAACTACTTATTCTTGGGTGATTACG
TGGACAGAGGAAAACAATCTTTGGAAACCATCTGTTTATTACTGGCATAC
AAAATCAAATATCCTGAAAACTTTTTCTTGTTAAGAGGAAACCATGAATG
TGCCAGTATTAACAGAATCTACGGCTTTTATGACGAATGTAAGATATTCT
CTTATTTTTAATtctcacacacacacacagcGTTTCTATTCTTGAATTCT
GTTAGGATATGAGGATATCCTCTTCTCTATTATTCTTTTTATTGACGCTA
AAACGAAGTATCATCAATGATTGCAATAGGATTAACTGAACAATGATTCT
ACTATGCTTAAAATACCTCTTGATACACGCCTGCTAATTCTGCTCTTACT
CCTTTCATGTTCTTAAGTAGTTATTATgatgaaatccaaaaaagacTAAT
CGCTAAGTAGTCGAGGGTTGTAACTTtaataattattactttttaacAAC
TAATTGGGAATTTGAATTATCAGAAGTCATTTTGTTTATATTCAACGTGA
ACTCCAATTTTCTGAAATGCAATGTTTCGAGATATTGCTTAAGGGTTGAT
TTTGGAACTATTTTTTTACAGGTAAAAGACGATTCAGTATCAAATTATGG
AAGACGTTCACAGATTGCTTCAATTGTTTACCCATCGCAGCTATCGTCga
cgaaaaaattttctgttgtcACGGAGGTGAAACTCAAAACCTTACTTTCC
TTTCACACTATATCATTTTCCTTTCTCTTGAAACATATCGCACCTAACCG
GAGTGTTGCAATTCCgtccattttgaatttaataacATGGACTTCCGTCC
AAAATAAGCGCTTGATAGCAGAAAAGAGTCAGATTTGAGACATTCCGCCC
AGATTCAGCAAAGTCGGTTGCGGCATTGATACTAcaatttttaggcctcc
agTACACTACTAAAGAGCTTGGTATCAGATTATCAGAAACCTTTTGAAAC
AATTATTTTATTCTCTTTCCGTCTGTACACAGGACTTTCACCCGATTTAC
AATCCATGGAACAAATTCGACGAATCATGAGACCAACCGACGTCCCTGAT
GCAGGTTAGACCCCTCTCTCAGCGAATGCTTTGGCTTTCTTTATCTATTT
TGGTTTCCGAAACTCATAATTAGAAACTCAGAGCCTTTGGTCGAAGCACA
ATACTGACTGTTAACGTAGTAATAAGCTTGTTTCTCTCTAAAGAGACGAA
GCGGCTATTGGGCTATTagctgtttatttttctttgtttatgtaATCCAT
GACATAAAGATTCCTTATATGATGTTACTCTATgtgacaaaaataaaaca
agagtTTTAAATCTGTACGTTTTCATTAATGTTTACAACGTATAATGTAT
AACGGAAATATGTCATAACATTATATTTAAAGAAATGGCCAATCACTTGC
TAAAGCTGTCTTAAGTTGAGTTGTGTGATTTCAAGGCATAAATTTATACA
TTTGGAGGAGTTTTTGTCACCAAACATAAATCTTTTTTTCGCAGGTTTAC
TTTGCGATTTATTATGGTCTGATCCCGATAAAGAAATCACAGGATGGGGA
GAAAATGATCGTGGTGTCTCATTCACATTCGGTGCCGATGTTGTCGGCAA
ATTCTTAAATAGACACGACCTCGATCTCATATGCAGGGCTCACCAGGTAT
CTCATTTTATATTCCCAGATTCTTTAAATGATACTAAATAGCAAAATAAG
AAACTGCAACAAACTTAAAGCAAAATACGTGCGTTGTTTGCCTTCGTTCT
TGTTCACAGCCTTCCTGTTTTACTTCATGTTTAACTGTATGGGTAAGGTA
TATATCATTTCTTACAGATCCAGTTGTAGAATTTTCTCCGTTCTTTTCGA
ACCAGATTTCATAATTACTTTAGATATTAATACGATTCTAGAATTAATTT
ACCATGAAGTAAAACGGTGTTTAAGTATCTTGGTTAtctggtttgaaagt
ctctataGCCTACTGCTACTGGGGTATTGTCTTTTATTTTCTTGGCTTTA
AtcagattttcaattttcacaaaTTAATAGGTCGTTGAAGACGGATATGA
ATTTTTCGCTAAACGCCAATTGGTTACACTCTTCTCTGCACCCAACTACT
GTGGTGAATTTGATAACGCGGGTGGTATGATGAGTGTGGACGACACCCTG
ATGTGTTCTTTCCAGGTATGCTACTTATTTTCTCAAATACTTCATGGGAT
GAGTTGGAGAATAGCATAATGCTACATGGGCCAAGTACTATAACCTCGTT
AAAAGGAGATTGGAATAGTTTTTGTTGTCTGACCTTTGTTTGCTCTAGTT
AACTCAgctattatattttatttttaaattttgaaagatttataGGTTCT
TTCTCGGGACGATATAGAAGGTCAAACATCTCAAACTATTTTTGATTATC
CGATTTTTATTATCCCACATTGATAACAGTAAATCTTTTGCTTTCTTTGA
ATATGCTTTTGTTTGTTAAAACCTACTAATCCGTAAACGGTCAATGTATT
TTGCTTGACAATCCACAATATTTCAATCCCGATCTTTTTATCTTTACAGA
TCCTGAAACCGGCAGAGAAGAAAGCGAAATACCAATATAGTGGTTTGAAC
ACTGGGCGCCCTATTACGCCACCACGCAACCAAAACAGTAAAGGGAAAGA
CAACAAGGGGAAAAGATGAGGACCTTTAGAAACAAATAAAATGAGTGAGA
GAAAACAACATTATTCTTTGATACTGTGCATTCGCGGTCGATAGATCTAA
TGTCAAGTTGACAAAACCAGACTTCATCTTTGNGCCCAGTCGATAGATCT
AAAGTAATGTCAAGTTGACAAAACCAGACTTCATCTTTGAGAGGGAAAGA
ATGAAATGACACTCGCAATTTTTCGGTCAATAAAGACTTTGTATCATGTA
CATAAAATGTGGACACCCTTTAAAAATCATCGATCTgtgatttatttgtt
tttatattatataatcTGTAATTTTGTCAATCATTTTAGGttcaaaaatg
tttgtttatcttAAAATACCGTAACTTTCTTTTTATACAAATGTACAGAA
AATTAAGTAATCACTTCC

Coding sequence (CDS) from alignment at sc0000714:124542..135209+

>TCONS_00028883 ID=TCONS_00028883|Name=TCONS_00028883|organism=Clytia hemisphaerica|type=CDS|length=7968bp|location=Sequence derived from alignment at sc0000714:124542..135209+ (Clytia hemisphaerica)
ATGGCTGATTCTGAAATCAATATTGACAGTCTGATCTCACGACTCTTGGA
AGCTCGTGGCAGACCAGGAAAAACAGTTCAAATGACAGAGGCTGAGGTCA
AAGGGCTTTGCATGAAATCAAGAGAACTTTTCCTCAGTCAGCCCATTTTA
CTGGAACTTGAAGCTCCCTTAAAGATTTGCGGTGATATACATGGACAATA
TTCCGATTTATTACGTCTTTTCGAATACGGAGGATTCCCTCCAGAAGCCA
ACTACTTATTCTTGGGTGATTACGTGGACAGAGGAAAACAATCTTTGGAA
ACCATCTGTTTATTACTGGCATACAAAATCAAATATCCTGAAAACTTTTT
CTTGTTAAGAGGAAACCATGAATGTGCCAGTATTAACAGAATCTACGGCT
TTTATGACGAATGTAAAAGACGATTCAGTATCAAATTATGGAAGACGTTC
ACAGATTGCTTCAATTGTTTACCCATCGCAGCTATCGTCgacgaaaaaat
tttctgttgtcACGGAGGACTTTCACCCGATTTACAATCCATGGAACAAA
TTCGACGAATCATGAGACCAACCGACGTCCCTGATGCAGGTTTACTTTGC
GATTTATTATGGTCTGATCCCGATAAAGAAATCACAGGATGGGGAGAAAA
TGATCGTGGTGTCTCATTCACATTCGGTGCCGATGTTGTCGGCAAATTCT
TAAATAGACACGACCTCGATCTCATATGCAGGGCTCACCAGGTCGTTGAA
GACGGATATGAATTTTTCGCTAAACGCCAATTGGTTACACTCTTCTCTGC
ACCCAACTACTGTGGTGAATTTGATAACGCGGGTGGTATGATGAGTGTGG
ACGACACCCTGATGTGTTCTTTCCAGATCCTGAAACCGGCAGAGAAGAAA
GCGAAATACCAATATAGTGGTTTGAACACTGGGCGCCCTATTACGCCACC
ACGCAACCAAAACAGTAAAGGGAAAGACAACAAGGGGAAAAGATGAATGG
CTGATTCTGAAATCAATATTGACAGTCTGATCTCACGACTCTTGGAAGCT
CGTGGCAGACCAGGAAAAACAGTTCAAATGACAGAGGCTGAGGTCAAAGG
GCTTTGCATGAAATCAAGAGAACTTTTCCTCAGTCAGCCCATTTTACTGG
AACTTGAAGCTCCCTTAAAGATTTGCGGTGATATACATGGACAATATTCC
GATTTATTACGTCTTTTCGAATACGGAGGATTCCCTCCAGAAGCCAACTA
CTTATTCTTGGGTGATTACGTGGACAGAGGAAAACAATCTTTGGAAACCA
TCTGTTTATTACTGGCATACAAAATCAAATATCCTGAAAACTTTTTCTTG
TTAAGAGGAAACCATGAATGTGCCAGTATTAACAGAATCTACGGCTTTTA
TGACGAATGTAAAAGACGATTCAGTATCAAATTATGGAAGACGTTCACAG
ATTGCTTCAATTGTTTACCCATCGCAGCTATCGTCgacgaaaaaattttc
tgttgtcACGGAGGACTTTCACCCGATTTACAATCCATGGAACAAATTCG
ACGAATCATGAGACCAACCGACGTCCCTGATGCAGGTTTACTTTGCGATT
TATTATGGTCTGATCCCGATAAAGAAATCACAGGATGGGGAGAAAATGAT
CGTGGTGTCTCATTCACATTCGGTGCCGATGTTGTCGGCAAATTCTTAAA
TAGACACGACCTCGATCTCATATGCAGGGCTCACCAGGTCGTTGAAGACG
GATATGAATTTTTCGCTAAACGCCAATTGGTTACACTCTTCTCTGCACCC
AACTACTGTGGTGAATTTGATAACGCGGGTGGTATGATGAGTGTGGACGA
CACCCTGATGTGTTCTTTCCAGATCCTGAAACCGGCAGAGAAGAAAGCGA
AATACCAATATAGTGGTTTGAACACTGGGCGCCCTATTACGCCACCACGC
AACCAAAACAGTAAAGGGAAAGACAACAAGGGGAAAAGATGAATGGCTGA
TTCTGAAATCAATATTGACAGTCTGATCTCACGACTCTTGGAAGCTCGTG
GCAGACCAGGAAAAACAGTTCAAATGACAGAGGCTGAGGTCAAAGGGCTT
TGCATGAAATCAAGAGAACTTTTCCTCAGTCAGCCCATTTTACTGGAACT
TGAAGCTCCCTTAAAGATTTGCGGTGATATACATGGACAATATTCCGATT
TATTACGTCTTTTCGAATACGGAGGATTCCCTCCAGAAGCCAACTACTTA
TTCTTGGGTGATTACGTGGACAGAGGAAAACAATCTTTGGAAACCATCTG
TTTATTACTGGCATACAAAATCAAATATCCTGAAAACTTTTTCTTGTTAA
GAGGAAACCATGAATGTGCCAGTATTAACAGAATCTACGGCTTTTATGAC
GAATGTAAAAGACGATTCAGTATCAAATTATGGAAGACGTTCACAGATTG
CTTCAATTGTTTACCCATCGCAGCTATCGTCgacgaaaaaattttctgtt
gtcACGGAGGACTTTCACCCGATTTACAATCCATGGAACAAATTCGACGA
ATCATGAGACCAACCGACGTCCCTGATGCAGGTTTACTTTGCGATTTATT
ATGGTCTGATCCCGATAAAGAAATCACAGGATGGGGAGAAAATGATCGTG
GTGTCTCATTCACATTCGGTGCCGATGTTGTCGGCAAATTCTTAAATAGA
CACGACCTCGATCTCATATGCAGGGCTCACCAGGTCGTTGAAGACGGATA
TGAATTTTTCGCTAAACGCCAATTGGTTACACTCTTCTCTGCACCCAACT
ACTGTGGTGAATTTGATAACGCGGGTGGTATGATGAGTGTGGACGACACC
CTGATGTGTTCTTTCCAGATCCTGAAACCGGCAGAGAAGAAAGCGAAATA
CCAATATAGTGGTTTGAACACTGGGCGCCCTATTACGCCACCACGCAACC
AAAACAGTAAAGGGAAAGACAACAAGGGGAAAAGATGAATGGCTGATTCT
GAAATCAATATTGACAGTCTGATCTCACGACTCTTGGAAGCTCGTGGCAG
ACCAGGAAAAACAGTTCAAATGACAGAGGCTGAGGTCAAAGGGCTTTGCA
TGAAATCAAGAGAACTTTTCCTCAGTCAGCCCATTTTACTGGAACTTGAA
GCTCCCTTAAAGATTTGCGGTGATATACATGGACAATATTCCGATTTATT
ACGTCTTTTCGAATACGGAGGATTCCCTCCAGAAGCCAACTACTTATTCT
TGGGTGATTACGTGGACAGAGGAAAACAATCTTTGGAAACCATCTGTTTA
TTACTGGCATACAAAATCAAATATCCTGAAAACTTTTTCTTGTTAAGAGG
AAACCATGAATGTGCCAGTATTAACAGAATCTACGGCTTTTATGACGAAT
GTAAAAGACGATTCAGTATCAAATTATGGAAGACGTTCACAGATTGCTTC
AATTGTTTACCCATCGCAGCTATCGTCgacgaaaaaattttctgttgtcA
CGGAGGACTTTCACCCGATTTACAATCCATGGAACAAATTCGACGAATCA
TGAGACCAACCGACGTCCCTGATGCAGGTTTACTTTGCGATTTATTATGG
TCTGATCCCGATAAAGAAATCACAGGATGGGGAGAAAATGATCGTGGTGT
CTCATTCACATTCGGTGCCGATGTTGTCGGCAAATTCTTAAATAGACACG
ACCTCGATCTCATATGCAGGGCTCACCAGGTCGTTGAAGACGGATATGAA
TTTTTCGCTAAACGCCAATTGGTTACACTCTTCTCTGCACCCAACTACTG
TGGTGAATTTGATAACGCGGGTGGTATGATGAGTGTGGACGACACCCTGA
TGTGTTCTTTCCAGATCCTGAAACCGGCAGAGAAGAAAGCGAAATACCAA
TATAGTGGTTTGAACACTGGGCGCCCTATTACGCCACCACGCAACCAAAA
CAGTAAAGGGAAAGACAACAAGGGGAAAAGATGAATGGCTGATTCTGAAA
TCAATATTGACAGTCTGATCTCACGACTCTTGGAAGCTCGTGGCAGACCA
GGAAAAACAGTTCAAATGACAGAGGCTGAGGTCAAAGGGCTTTGCATGAA
ATCAAGAGAACTTTTCCTCAGTCAGCCCATTTTACTGGAACTTGAAGCTC
CCTTAAAGATTTGCGGTGATATACATGGACAATATTCCGATTTATTACGT
CTTTTCGAATACGGAGGATTCCCTCCAGAAGCCAACTACTTATTCTTGGG
TGATTACGTGGACAGAGGAAAACAATCTTTGGAAACCATCTGTTTATTAC
TGGCATACAAAATCAAATATCCTGAAAACTTTTTCTTGTTAAGAGGAAAC
CATGAATGTGCCAGTATTAACAGAATCTACGGCTTTTATGACGAATGTAA
AAGACGATTCAGTATCAAATTATGGAAGACGTTCACAGATTGCTTCAATT
GTTTACCCATCGCAGCTATCGTCgacgaaaaaattttctgttgtcACGGA
GGACTTTCACCCGATTTACAATCCATGGAACAAATTCGACGAATCATGAG
ACCAACCGACGTCCCTGATGCAGGTTTACTTTGCGATTTATTATGGTCTG
ATCCCGATAAAGAAATCACAGGATGGGGAGAAAATGATCGTGGTGTCTCA
TTCACATTCGGTGCCGATGTTGTCGGCAAATTCTTAAATAGACACGACCT
CGATCTCATATGCAGGGCTCACCAGGTCGTTGAAGACGGATATGAATTTT
TCGCTAAACGCCAATTGGTTACACTCTTCTCTGCACCCAACTACTGTGGT
GAATTTGATAACGCGGGTGGTATGATGAGTGTGGACGACACCCTGATGTG
TTCTTTCCAGATCCTGAAACCGGCAGAGAAGAAAGCGAAATACCAATATA
GTGGTTTGAACACTGGGCGCCCTATTACGCCACCACGCAACCAAAACAGT
AAAGGGAAAGACAACAAGGGGAAAAGATGAATGGCTGATTCTGAAATCAA
TATTGACAGTCTGATCTCACGACTCTTGGAAGCTCGTGGCAGACCAGGAA
AAACAGTTCAAATGACAGAGGCTGAGGTCAAAGGGCTTTGCATGAAATCA
AGAGAACTTTTCCTCAGTCAGCCCATTTTACTGGAACTTGAAGCTCCCTT
AAAGATTTGCGGTGATATACATGGACAATATTCCGATTTATTACGTCTTT
TCGAATACGGAGGATTCCCTCCAGAAGCCAACTACTTATTCTTGGGTGAT
TACGTGGACAGAGGAAAACAATCTTTGGAAACCATCTGTTTATTACTGGC
ATACAAAATCAAATATCCTGAAAACTTTTTCTTGTTAAGAGGAAACCATG
AATGTGCCAGTATTAACAGAATCTACGGCTTTTATGACGAATGTAAAAGA
CGATTCAGTATCAAATTATGGAAGACGTTCACAGATTGCTTCAATTGTTT
ACCCATCGCAGCTATCGTCgacgaaaaaattttctgttgtcACGGAGGAC
TTTCACCCGATTTACAATCCATGGAACAAATTCGACGAATCATGAGACCA
ACCGACGTCCCTGATGCAGGTTTACTTTGCGATTTATTATGGTCTGATCC
CGATAAAGAAATCACAGGATGGGGAGAAAATGATCGTGGTGTCTCATTCA
CATTCGGTGCCGATGTTGTCGGCAAATTCTTAAATAGACACGACCTCGAT
CTCATATGCAGGGCTCACCAGGTCGTTGAAGACGGATATGAATTTTTCGC
TAAACGCCAATTGGTTACACTCTTCTCTGCACCCAACTACTGTGGTGAAT
TTGATAACGCGGGTGGTATGATGAGTGTGGACGACACCCTGATGTGTTCT
TTCCAGATCCTGAAACCGGCAGAGAAGAAAGCGAAATACCAATATAGTGG
TTTGAACACTGGGCGCCCTATTACGCCACCACGCAACCAAAACAGTAAAG
GGAAAGACAACAAGGGGAAAAGATGAATGGCTGATTCTGAAATCAATATT
GACAGTCTGATCTCACGACTCTTGGAAGCTCGTGGCAGACCAGGAAAAAC
AGTTCAAATGACAGAGGCTGAGGTCAAAGGGCTTTGCATGAAATCAAGAG
AACTTTTCCTCAGTCAGCCCATTTTACTGGAACTTGAAGCTCCCTTAAAG
ATTTGCGGTGATATACATGGACAATATTCCGATTTATTACGTCTTTTCGA
ATACGGAGGATTCCCTCCAGAAGCCAACTACTTATTCTTGGGTGATTACG
TGGACAGAGGAAAACAATCTTTGGAAACCATCTGTTTATTACTGGCATAC
AAAATCAAATATCCTGAAAACTTTTTCTTGTTAAGAGGAAACCATGAATG
TGCCAGTATTAACAGAATCTACGGCTTTTATGACGAATGTAAAAGACGAT
TCAGTATCAAATTATGGAAGACGTTCACAGATTGCTTCAATTGTTTACCC
ATCGCAGCTATCGTCgacgaaaaaattttctgttgtcACGGAGGACTTTC
ACCCGATTTACAATCCATGGAACAAATTCGACGAATCATGAGACCAACCG
ACGTCCCTGATGCAGGTTTACTTTGCGATTTATTATGGTCTGATCCCGAT
AAAGAAATCACAGGATGGGGAGAAAATGATCGTGGTGTCTCATTCACATT
CGGTGCCGATGTTGTCGGCAAATTCTTAAATAGACACGACCTCGATCTCA
TATGCAGGGCTCACCAGGTCGTTGAAGACGGATATGAATTTTTCGCTAAA
CGCCAATTGGTTACACTCTTCTCTGCACCCAACTACTGTGGTGAATTTGA
TAACGCGGGTGGTATGATGAGTGTGGACGACACCCTGATGTGTTCTTTCC
AGATCCTGAAACCGGCAGAGAAGAAAGCGAAATACCAATATAGTGGTTTG
AACACTGGGCGCCCTATTACGCCACCACGCAACCAAAACAGTAAAGGGAA
AGACAACAAGGGGAAAAGATGAATGGCTGATTCTGAAATCAATATTGACA
GTCTGATCTCACGACTCTTGGAAGCTCGTGGCAGACCAGGAAAAACAGTT
CAAATGACAGAGGCTGAGGTCAAAGGGCTTTGCATGAAATCAAGAGAACT
TTTCCTCAGTCAGCCCATTTTACTGGAACTTGAAGCTCCCTTAAAGATTT
GCGGTGATATACATGGACAATATTCCGATTTATTACGTCTTTTCGAATAC
GGAGGATTCCCTCCAGAAGCCAACTACTTATTCTTGGGTGATTACGTGGA
CAGAGGAAAACAATCTTTGGAAACCATCTGTTTATTACTGGCATACAAAA
TCAAATATCCTGAAAACTTTTTCTTGTTAAGAGGAAACCATGAATGTGCC
AGTATTAACAGAATCTACGGCTTTTATGACGAATGTAAAAGACGATTCAG
TATCAAATTATGGAAGACGTTCACAGATTGCTTCAATTGTTTACCCATCG
CAGCTATCGTCgacgaaaaaattttctgttgtcACGGAGGACTTTCACCC
GATTTACAATCCATGGAACAAATTCGACGAATCATGAGACCAACCGACGT
CCCTGATGCAGGTTTACTTTGCGATTTATTATGGTCTGATCCCGATAAAG
AAATCACAGGATGGGGAGAAAATGATCGTGGTGTCTCATTCACATTCGGT
GCCGATGTTGTCGGCAAATTCTTAAATAGACACGACCTCGATCTCATATG
CAGGGCTCACCAGGTCGTTGAAGACGGATATGAATTTTTCGCTAAACGCC
AATTGGTTACACTCTTCTCTGCACCCAACTACTGTGGTGAATTTGATAAC
GCGGGTGGTATGATGAGTGTGGACGACACCCTGATGTGTTCTTTCCAGAT
CCTGAAACCGGCAGAGAAGAAAGCGAAATACCAATATAGTGGTTTGAACA
CTGGGCGCCCTATTACGCCACCACGCAACCAAAACAGTAAAGGGAAAGAC
AACAAGGGGAAAAGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016397XLOC_016397Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028883-exon-sc0000714-1491911889:124542..124902TCONS_00028883-exon-sc0000714-1491911889:124542..124902Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:124542..124902TCONS_00028883-exon-sc0000714-1510915933:124542..124902Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:124542..124902TCONS_00028883-exon-sc0000714-1575043694:124542..124902Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:131146..131274TCONS_00028883-exon-sc0000714-1491911889:131146..131274Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:131146..131274TCONS_00028883-exon-sc0000714-1510915933:131146..131274Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:131146..131274TCONS_00028883-exon-sc0000714-1575043694:131146..131274Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:132049..132279TCONS_00028883-exon-sc0000714-1491911889:132049..132279Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:132049..132279TCONS_00028883-exon-sc0000714-1510915933:132049..132279Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:132049..132279TCONS_00028883-exon-sc0000714-1575043694:132049..132279Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:132713..132817TCONS_00028883-exon-sc0000714-1491911889:132713..132817Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:132713..132817TCONS_00028883-exon-sc0000714-1510915933:132713..132817Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:132713..132817TCONS_00028883-exon-sc0000714-1575043694:132713..132817Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:133124..133195TCONS_00028883-exon-sc0000714-1491911889:133124..133195Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:133124..133195TCONS_00028883-exon-sc0000714-1510915933:133124..133195Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:133124..133195TCONS_00028883-exon-sc0000714-1575043694:133124..133195Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:133636..133787TCONS_00028883-exon-sc0000714-1491911889:133636..133787Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:133636..133787TCONS_00028883-exon-sc0000714-1510915933:133636..133787Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:133636..133787TCONS_00028883-exon-sc0000714-1575043694:133636..133787Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:134172..134306TCONS_00028883-exon-sc0000714-1491911889:134172..134306Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:134172..134306TCONS_00028883-exon-sc0000714-1510915933:134172..134306Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:134172..134306TCONS_00028883-exon-sc0000714-1575043694:134172..134306Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1491911889:134691..135209TCONS_00028883-exon-sc0000714-1491911889:134691..135209Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1510915933:134691..135209TCONS_00028883-exon-sc0000714-1510915933:134691..135209Clytia hemisphaericaexon
TCONS_00028883-exon-sc0000714-1575043694:134691..135209TCONS_00028883-exon-sc0000714-1575043694:134691..135209Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028883-proteinTCONS_00028883-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000714supercontigsc0000714:124542..135209 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
252.824	240.236	665.477	725.325	381.73	299.261	271.297	291.193	185.892	222.218	152.2	134.902	159.896	150.103	124.482	134.602	240.412	236.355	171.572	211.464	204.052	201.726	241.949	241.158	175.453	188.329	256.923	215.824	202.886	215.29
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006186Ser/Thr-sp_prot-phosphatase
IPR031675STPPase_N
IPR004843Calcineurin-like_PHP_ApaH
IPR029052Metallo-depent_PP-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
Blast
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BLAST of TCONS_00028883 vs. Swiss-Prot (Human)
Match: PP1B (Serine/threonine-protein phosphatase PP1-beta catalytic subunit OS=Homo sapiens GN=PPP1CB PE=1 SV=3)

HSP 1 Score: 630.172 bits (1624), Expect = 0.000e+0
Identity = 299/326 (91.72%), Postives = 313/326 (96.01%), Query Frame = 1 
Query:  310 MADSEINIDSLISRLLEARG-RPGKTVQMTEAEVKGLCMKSRELFLSQPILLELEAPLKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFSIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDAGLLCDLLWSDPDKEITGWGENDRGVSFTFGADVVGKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDDTLMCSFQILKPAEKKAKYQYSGLNTGRPITPPRNQNSKGK 1284
            MAD E+N+DSLI+RLLE RG RPGK VQMTEAEV+GLC+KSRE+FLSQPILLELEAPLKICGDIHGQY+DLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRF+IKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPD GLLCDLLWSDPDK++ GWGENDRGVSFTFGADVV KFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVD+TLMCSFQILKP+EKKAKYQY GLN+GRP+TPPR  N   K
Sbjct:    1 MADGELNVDSLITRLLEVRGCRPGKIVQMTEAEVRGLCIKSREIFLSQPILLELEAPLKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQILKPSEKKAKYQYGGLNSGRPVTPPRTANPPKK 326
The following BLAST results are available for this feature:
BLAST of TCONS_00028883 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PP1B0.000e+091.72Serine/threonine-protein phosphatase PP1-beta cata... [more]
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