TCONS_00028431 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028431
Unique NameTCONS_00028431
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1645

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028431 ID=TCONS_00028431|Name=TCONS_00028431|organism=Clytia hemisphaerica|type=transcript|length=1645bp
GAAATAGATATAAATCCATTAAAGTTATTTATATATTACCCTATGAGACG
CAACaaataacaaacaaaatcatttttgaatttcagaTAAGGTATGAGCA
AAGAATAAAATAGtacaaaaagaacaaagagGAAGAGCAATCCAATGAGC
TTACCATCTATACATGGAAAGTTTCCGCTCTCCTTTTAAAAGGTATTTTA
GAGTCTATATAAAACTCACCATGACTTAAATTACAAGGGTTTATAAGTGA
ACGTATGATATGGGTCTAATCATAGTGAAATTGAATCAGACTGAAGACTG
GTGTTAACGTAGAAATAGACTTTTTTACTGATCAACAAAGAAACTAAACC
TACAGAAATGAAAACTCTCTTCTCCCTTGTGTTTTTACTGGTGGTGATCT
CCGTACATTTATCGTATCAACAACGTCCAAGGCCTTTTAAGCCTTACAGA
CCTTCTAGGCCATGCTGCTCTGCTTTGCGTCATTACAAAAGATTGTATAG
ACAAATCCGAAACCAATGCAAAAAGGAAGTCCAAAATCTAACTACTGGAG
TTAATAAGCTGAAGACTGCTTTAAACACGACACAAGTTGTTCTTAAAGTT
GTTCCACAAAGTATCAAACCACCTACACTTGACAGATTGGAATTAATACG
AGTACAACTTATTGAGAAATTACAGAATTTATCATTCAACAATAGCGATG
AAAATGACGGTTTGAATAATGAGGGGCGTGGTCAAAGAGGGCGACGAACC
TTACCTGcttACTGTCCAACAGATTTTAATACGATTAAGGCAACGATTGG
CAATCCTGGTGGCATATCATTTGCAGCTATGAATACAGCATCTCTCAGCC
ACAGAGATTCACTTGATCCTATTAATGTTAATCTTCTTTACGCATGCGCC
GAATGTCGCTACCAAATCACTTTACCAGGtTACATCCCGGAAGAGCACGA
GCATATTATTTGTCCACAGATGAAACAATCTTGTATTGCTGGAGTAGGTG
AATGTGCTAAACTTGAAGTTCTAACAACAATTTATGACCCAGTTGCACAG
GAATCAAAACACATTATTTTAAACAAAGGATGTTCGTGCCAGCAGTTGTC
CTCTTTTTATTATTTGGGAGATGGGAACTAGCCTTGGTAATTTCTGTCTT
TTCCAAGAGGTACTAGGTTGGTAAGCTAACAGAATGCACCACCCTTATTT
AGACCAATTGAACCTTTGACCTTGACAGTCAGAactgaaaaggaaaaata
acgGCTACAGAATATTTATAAAAGATTAATTTATGGTGAGGTTACattta
tgaaaaattatgttttgtactTAGTTTATAAATTTGCTCTATTTGAAATT
ATTATCTTACACATAAAGtggtattttattttcaagctgTTTAACAATTT
CAAAGTTAATCAAGAATAtttatttctttcaattttgctgtaatttaaaa
tatcaacaCACGAGACACATGACACACACGTCCGTTTtcctattttgaaa
attttccgcaaTTCCAGAATTGATGTAGGAAAATtcttcatacacgtttt
tttttatNtaagttcggttaaaactgcttgaaaagaggaaaaaattgtag
tttcttgtcaattttttccaaactgaggctgggcatgttcttacg
Run BLAST on NCBI

protein sequence of TCONS_00028431-protein

>TCONS_00028431-protein ID=TCONS_00028431-protein|Name=TCONS_00028431-protein|organism=Clytia hemisphaerica|type=polypeptide|length=257bp
MKTLFSLVFLLVVISVHLSYQQRPRPFKPYRPSRPCCSALRHYKRLYRQI
RNQCKKEVQNLTTGVNKLKTALNTTQVVLKVVPQSIKPPTLDRLELIRVQ
LIEKLQNLSFNNSDENDGLNNEGRGQRGRRTLPAYCPTDFNTIKATIGNP
GGISFAAMNTASLSHRDSLDPINVNLLYACAECRYQITLPGYIPEEHEHI
ICPQMKQSCIAGVGECAKLEVLTTIYDPVAQESKHIILNKGCSCQQLSSF
YYLGDGN
Run BLAST on NCBI

transcript from alignment at sc0000678:25551..31905-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028431 ID=TCONS_00028431|Name=TCONS_00028431|organism=Clytia hemisphaerica|type=transcript|length=6355bp|location=Sequence derived from alignment at sc0000678:25551..31905- (Clytia hemisphaerica)
GAAATAGATATAAATCCATTAAAGTTATTTATATATTACCCTATGAGACG
CAACAAATAACAAACAAAATCATTTTTGAATTTCAGATAAGGTATGAGCA
AAGAATAAAATAGTACAAAAAGAACAAAGAGGAAGAGCAATCCAATGAGC
TTACCATCTATACATGGAAAGTTTCCGCTCTCCTTTTAAAAGGTATTTTA
GAGTCTATATAAAACTCACCATGACTTAAATTACAAGGGTTTATAAGTGA
ACGTATGATATGGGTCTAATCATAGTGAAATTGAATCAGACTGAAGACTG
GTGTTAACGTAGAAATAGACTTTTTTACTGATCAACAAAGAAACTAAACC
TACAGAAATGGTAAGATAAAGGCACAATCCCAGCTGGCACACAACGTTGT
TTCAACGTTCACCTAACGTTATATGGACGTTGTGAACGTTAGATAAACGT
CGAAAAAACGTTGTGTGCCTGCTGGGATGGTAAACTGGTCTTTTTAGAGT
GTCCATTTTTTTCTACAGTACAGTACTCTTGTCTCCCGAATAGACGTCCC
CCCCGCTAATTGTTGAGAGCAAAAAAAATCCATCCCCCCCGCTCTTATTA
AGACCCCCTGCTAATTAAATTTTAATAATTAAATTATTTATTACAGTGTA
GATAGATCTTAAGCTTGTTAAAATTTTAGGGCATTTTTTTTTGTCCGCTT
TATCCCACTAAAACCGTCCCAATCCTTTATTGACGCATTTGTCTATTGTC
TATCGGTGTGAAAAAAGGACTAGGACGGTTTTAGTGGGATGAAGCGGACA
AATAAATGCCTGCGCGGCATTTGTTGGCTACGGTCGAAAAGGTGTATTGT
TGTAACTTTTTGTTAACTTTTTTCTTCGTTAAGAATACGATTAAAAGAGC
CGATTTGTTCAGTTTTTGATCACGTTACCAAATACTCCTCTTGAGATTGG
TTCAAAAGTTAATCATACGATCAAAAAGTGAGCAAAACAAACTAATTTCT
CAACGCAAGTTCAAGTAAGAAACAATAGAAAGAAACAAAAGGTTTCCAGA
CCGTGGTTTCTTATACAGATTATGGATAGAATTGGTCGGTCAAGTCCAAC
CATAATCAATTAATTCTTGATATTCATGATGTAATCTTTTCGTTGATTGA
CATTCCAAATCAAAACATTTGGCCGCCATTATTGGTGGCAAAACAAAAGC
GTTCCCCAATGTTTTCCAAGAAAGGACCCCCGGAAAAAATAATAAAAGAT
TAATACAGAAGTCCAAATACTCCAAATCAAAGAAAAAACTCTTTAATTGA
AATTCTTTAATTATCTGCAATAGATTTCCAAAAGATATTTAATTCTATTA
TATTACATCACAAGATATTAAGCTTTCTTTTTCGTAAACCCCCCGGAGTA
GTGCTATGCACACCCAGTTTCAATATAAAATAGGTTAGCGGAGCAAATTT
TTTTGCCACCAATAATGGCGGCAAAGTTGTTACGTCACATCTATTATTTA
AGCGCAAAGATTACATCATGAATATCATCATAAACATATAAACGACTGGA
CATCCATCTCCTTTGTCTTTTTGTAGAAAGGGCTGCTAGCTTCGTTGCCG
CCTCGTTAAAAGCATAAAATGAAACAANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTAAACTTTGGCAAGCTATTT
TTTTCAAGTCATAAAAAAATTTATTGGAGTGACAAAAGGGATTCAAAAGT
ATACACGCAGTTGAAATTCTGCATTTTAGAGTAGAAAATGTTGATAAAAT
ATATTACAAACTTGTGAAAAAATTCGAGAGTAATTTTTTTGCGAATTGGG
AATAATGTTCAAGCCCTATTAATCCTTTTACCTAAATAATTCAAAGAAAT
AAAATTATGACGGAATATTGTCGGATTTTTCATATCAATTTTGAAATACA
GGTGGCAACGAAGCTCGCTTCAAAGAGACAATAAAGATAGATGTCCAGTC
GTTTATATGTTCATGATATCATGAATATCCTATCCTATCTTAACCTAGTT
GCATATATTTTTGCGTGGACTTTTTCGGACTTTTTCAATGAAATGAAAAA
TTAATATTCACTTGGTTTCATGATTAATATTAAAAATCTTGAAAAGCTTT
AAAGAAAATTTCTGCTGAAATACGATTTCTGCCTGGCATACCTGTTAGAG
CATACTTTGTTGCGCTATTTGAACACTTCTTATGATAAGCACACGAGCCT
CATTAAATTTTACCCTTTTTTATTACAGAAAACTCTCTTCTCCCTTGTGT
TTTTACTGGTGGTGATCTCCGTACATTTATCGTATCAACAACGTCCAAGG
CCTTTTAAGCCTTACAGACCTTCTAGGCCATGCTGCTCTGCTTTGCGTCA
TTACAAAAGATTGTATAGACAAATCCGAAACCAATGCAAAAAGGAAGTCC
AAAATCTAACTACTGGAGTTAATAAGCTGAAGACTGCTTTAAACACGACA
CAAGTTGTTCTTAAAGTTGTTCCACAAAGTATCAAACCACCTACACTTGA
CAGATTGGAATTAATACGAGTACAACTTATTGAGAAATTACAGAATTTAT
CATTCAACAATAGCGATGAAAATGACGGTTTGAATAATGAGGGGCGTGGT
CAAAGAGGGCGACGAACCTTACCTGGTAAGTCTCATTAGCCAGAAGTGTT
GGCACTCTTTTAGACATTGAGTTTAAAACCTAAAGGGCTAGAGTGGAATA
TTTTTCCATTGAATATTTGAATTTTGGAGGGGTTCAGTGGCTTCTGGGAT
ATATTCCAAGCCTTATTGGAGCAAATTTGAGCTTTTAAATCTTGAGATCC
TAAGCTGCTCCAATAAGTCTTAAGTCTCATGTTAAAACTCAGTTGAACGC
GCTTAAAAATCATTTGTGGTGTTTAAAATTTCGCAGGAAAATTCCTTCGG
GGATAGCCCAATGCATATAGACTCCCAAGAAAGCAGGGGTGAATAGTATT
CGCAATAATCTTCGCTATATAATATCAATAACTTATTATCTGAAACTGTT
TGTTATTGGGTACAAATACGGAGGATTAAATCGATAAAAAAGTTGAATAT
TGCTATAGAAATATTATTTTCATTTTTAGCTTACTGTCCAACAGATTTTA
ATACGATTAAGGCAACGATTGGCAATCCTGGTGGCATATCATTTGCAGCT
ATGAATACAGCATCTCTCAGCCACAGAGATTCACTTGATCCTATTAATGT
TAATCTTCTTTACGCATGCGCCGAATGTCGCTACCAAATCACTTTACCAG
GGTAATGAGATAATTTCAATATTTTTCCCGCACCTGATTGTACTGTGTTT
TTTACAGACCAGGCCCATAATTACCCATTATGCCTTTATCAGATCCAGGT
TATATCTCAGGATTGGAAATGCTATTAACTTTGAAGTTTTGATAAGTGTT
AGGTATTGACGATACAAGCATTTTTCAGCAATAGCGGACGAGCAGTTAAG
CTAAAAGTGAAAATGTTTCGTAAAATACCATCTATATACACACGACTAAA
CAGTTTTTCACTTTGTCTTAGTTGATTAAATATCTATCACTAGTGAATAT
TTCAACTTGAAAGCTCCAGTAGTTCCAACAGGGGTTCGAAGTGTATTTCA
CAGACCGGTCGGCAAAGTACCAAATATTCATTGGATCAAACTTATTTTTT
TCTTAGTCTCTTCTTATTCTTTGACAAATCAGTCTTCGTGAATAAAGTTC
AGTTGAACCGAAAACGAGCCAATACGTGCTTTTGGACAAATTCGCATTAA
GGCAGAACAAAAGATTTTGCAAATGATTTCAAATTATCCATATCTACCAC
TGATGAAAAATGCAATCTTATAAGCCCCCCCCCTTCAAGATGCTTCTATT
GAAAAATAGAAAATGTTTTAGATACTTATTAAAAACGTAAATCTTACTGG
GTAGTCGATGATGAAATGCANATGTCGCTACCAAATCACTTTACCAGGGT
AATGAGATAATTTCAATATTTTTCCCGCACCTGATTGTACTGTGTTTTTT
ACAGACCAGGCCCATAATTACCCATTATGCCTTTATCAGATCCAGGTTAT
ATCTCAGGATTGGAAATGCTATTAACTTTGAAGTTTTGATAAGTGTTAGG
TATTGACGATACAAGCATTTTTCAGCAATAGCGGACGAGCAGTTAAGCTA
AAAGTGAAAATGTTTCGTAAAATACCATCTATATACACACGACTAAACAG
TTTTTCACTTTGTCTTAGTTGATTAAATATCTATCACTAGTGAATATTTC
AACTTGAAAGCTCCAGTAGTTCCAACAGGGGTTCGAAGTGTATTTCACAG
ACCGGTCGGCAAAGTACCAAATATTCATTGGATCAAACTTATTTTTTTCT
TAGTCTCTTCTTATTCTTTGACAAATCAGTCTTCGTGAATAAAGTTCAGT
TGAACCGAAAACGAGCCAATACGTGCTTTTGGACAAATTCGCATTAAGGC
AGAACAAAAGATTTTGCAAATGATTTCAAATTATCCATATCTACCACTGA
TGAAAAATGCAATCTCATAACCCCCCCCCTTCAAGATGCTTCTACTGAAA
AGTAGAAAATGTTTTAGATACTTATTAAAAACGTAAATCTTACTGGGTAG
TCGATGATGAAATGCGGTGGATTTTAGAGTATTTTGGATATTTTGGTTAC
AGTTCGGCCTCAATCCAAGATCCTGGATGAATACCATGGCTACCTTTTGT
TTTCTACTTTTTTGAAATATTCAAATTTCAAATTTTATAACGACATCAAT
TACGAAGTAACAAACCAGTTTTTCCTCCAATTTCTCTAAAAAGAAAAAAT
ATTGAATATCGTGACGTACCGTGGTACTCATCAGGTTCAACCTCGCCTGA
GCATCGATCTCCTAGTGTCGTTCGAGTGTCATGGTATACTCCATGACTTG
GCAGCACGCGCCTGTCAAGTCACTGTGTCTGTGATTATTCCTACCTCCGG
TAGTAGGACACATCCCGAATGATTCGGAGGGCATATACATATATCTTTCG
GTGATAAAACTAATGTTAGTAAATTTTACAATATTTTAGTTACATCCCGG
AAGAGCACGAGCATATTATTTGTCCACAGATGAAACAATCTTGTATTGCT
GGAGTAGGTGAATGTGCTAAACTTGAAGTTCTAACAACAATTTATGACCC
AGTTGCACAGGAATCAAAACACATTATTTTAAACAAAGGATGTTCGTGCC
AGCAGTTGTCCTCTTTTTATTATTTGGGAGATGGGAACTAGCCTTGGTAA
TTTCTGTCTTTTCCAAGAGGTACTAGGTTGGTAAGCTAACAGAATGCACC
ACCCTTATTTAGACCAATTGAACCTTTGACCTTGACAGTCAGAACTGAAA
AGGAAAAATAACGGCTACAGAATATTTATAAAAGATTAATTTATGGTGAG
GTTACATTTATGAAAAATTATGTTTTGTACTTAGTTTATAAATTTGCTCT
ATTTGAAATTATTATCTTACACATAAAGTGGTATTTTATTTTCAAGCTGT
TTAACAATTTCAAAGTTAATCAAGAATATTTATTTCTTTCAATTTTGCTG
TAATTTAAAATATCAACACACGAGACACATGACACACACGTCCGTTTTCC
TATTTTGAAAATTTTCCGCAATTCCAGAATTGATGTAGGAAAATTCTTCA
TACACGTTTTTTTTTATNTAAGTTCGGTTAAAACTGCTTGAAAAGAGGAA
AAAATTGTAGTTTCTTGTCAATTTTTTCCAAACTGAGGCTGGGCATGTTC
TTACG

Coding sequence (CDS) from alignment at sc0000678:25551..31905-

>TCONS_00028431 ID=TCONS_00028431|Name=TCONS_00028431|organism=Clytia hemisphaerica|type=CDS|length=3096bp|location=Sequence derived from alignment at sc0000678:25551..31905- (Clytia hemisphaerica)
TTACATCCCGGAAGAGCACGAGCATATTATTTGTCCACAGATGAAACAAT
CTTGTATTGCTGGAGTAGGTGAATGTGCTAAACTTGAAGTTCTAACAACA
ATTTATGACCCAGTTGCACAGGAATCAAAACACATTATTTTAAACAAAGG
ATGTTCGTGCCAGCAGTTGTCCTCTTTTTATTATTTGGGAGATGGGAACT
AGCTTACTGTCCAACAGATTTTAATACGATTAAGGCAACGATTGGCAATC
CTGGTGGCATATCATTTGCAGCTATGAATACAGCATCTCTCAGCCACAGA
GATTCACTTGATCCTATTAATGTTAATCTTCTTTACGCATGCGCCGAATG
TCGCTACCAAATCACTTTACCAGGAAAACTCTCTTCTCCCTTGTGTTTTT
ACTGGTGGTGATCTCCGTACATTTATCGTATCAACAACGTCCAAGGCCTT
TTAAGCCTTACAGACCTTCTAGGCCATGCTGCTCTGCTTTGCGTCATTAC
AAAAGATTGTATAGACAAATCCGAAACCAATGCAAAAAGGAAGTCCAAAA
TCTAACTACTGGAGTTAATAAGCTGAAGACTGCTTTAAACACGACACAAG
TTGTTCTTAAAGTTGTTCCACAAAGTATCAAACCACCTACACTTGACAGA
TTGGAATTAATACGAGTACAACTTATTGAGAAATTACAGAATTTATCATT
CAACAATAGCGATGAAAATGACGGTTTGAATAATGAGGGGCGTGGTCAAA
GAGGGCGACGAACCTTACCTGATGTTACATCCCGGAAGAGCACGAGCATA
TTATTTGTCCACAGATGAAACAATCTTGTATTGCTGGAGTAGGTGAATGT
GCTAAACTTGAAGTTCTAACAACAATTTATGACCCAGTTGCACAGGAATC
AAAACACATTATTTTAAACAAAGGATGTTCGTGCCAGCAGTTGTCCTCTT
TTTATTATTTGGGAGATGGGAACTAGCTTACTGTCCAACAGATTTTAATA
CGATTAAGGCAACGATTGGCAATCCTGGTGGCATATCATTTGCAGCTATG
AATACAGCATCTCTCAGCCACAGAGATTCACTTGATCCTATTAATGTTAA
TCTTCTTTACGCATGCGCCGAATGTCGCTACCAAATCACTTTACCAGGAA
AACTCTCTTCTCCCTTGTGTTTTTACTGGTGGTGATCTCCGTACATTTAT
CGTATCAACAACGTCCAAGGCCTTTTAAGCCTTACAGACCTTCTAGGCCA
TGCTGCTCTGCTTTGCGTCATTACAAAAGATTGTATAGACAAATCCGAAA
CCAATGCAAAAAGGAAGTCCAAAATCTAACTACTGGAGTTAATAAGCTGA
AGACTGCTTTAAACACGACACAAGTTGTTCTTAAAGTTGTTCCACAAAGT
ATCAAACCACCTACACTTGACAGATTGGAATTAATACGAGTACAACTTAT
TGAGAAATTACAGAATTTATCATTCAACAATAGCGATGAAAATGACGGTT
TGAATAATGAGGGGCGTGGTCAAAGAGGGCGACGAACCTTACCTGATGTT
ACATCCCGGAAGAGCACGAGCATATTATTTGTCCACAGATGAAACAATCT
TGTATTGCTGGAGTAGGTGAATGTGCTAAACTTGAAGTTCTAACAACAAT
TTATGACCCAGTTGCACAGGAATCAAAACACATTATTTTAAACAAAGGAT
GTTCGTGCCAGCAGTTGTCCTCTTTTTATTATTTGGGAGATGGGAACTAG
CTTACTGTCCAACAGATTTTAATACGATTAAGGCAACGATTGGCAATCCT
GGTGGCATATCATTTGCAGCTATGAATACAGCATCTCTCAGCCACAGAGA
TTCACTTGATCCTATTAATGTTAATCTTCTTTACGCATGCGCCGAATGTC
GCTACCAAATCACTTTACCAGGAAAACTCTCTTCTCCCTTGTGTTTTTAC
TGGTGGTGATCTCCGTACATTTATCGTATCAACAACGTCCAAGGCCTTTT
AAGCCTTACAGACCTTCTAGGCCATGCTGCTCTGCTTTGCGTCATTACAA
AAGATTGTATAGACAAATCCGAAACCAATGCAAAAAGGAAGTCCAAAATC
TAACTACTGGAGTTAATAAGCTGAAGACTGCTTTAAACACGACACAAGTT
GTTCTTAAAGTTGTTCCACAAAGTATCAAACCACCTACACTTGACAGATT
GGAATTAATACGAGTACAACTTATTGAGAAATTACAGAATTTATCATTCA
ACAATAGCGATGAAAATGACGGTTTGAATAATGAGGGGCGTGGTCAAAGA
GGGCGACGAACCTTACCTGATGTTACATCCCGGAAGAGCACGAGCATATT
ATTTGTCCACAGATGAAACAATCTTGTATTGCTGGAGTAGGTGAATGTGC
TAAACTTGAAGTTCTAACAACAATTTATGACCCAGTTGCACAGGAATCAA
AACACATTATTTTAAACAAAGGATGTTCGTGCCAGCAGTTGTCCTCTTTT
TATTATTTGGGAGATGGGAACTAGCTTACTGTCCAACAGATTTTAATACG
ATTAAGGCAACGATTGGCAATCCTGGTGGCATATCATTTGCAGCTATGAA
TACAGCATCTCTCAGCCACAGAGATTCACTTGATCCTATTAATGTTAATC
TTCTTTACGCATGCGCCGAATGTCGCTACCAAATCACTTTACCAGGAAAA
CTCTCTTCTCCCTTGTGTTTTTACTGGTGGTGATCTCCGTACATTTATCG
TATCAACAACGTCCAAGGCCTTTTAAGCCTTACAGACCTTCTAGGCCATG
CTGCTCTGCTTTGCGTCATTACAAAAGATTGTATAGACAAATCCGAAACC
AATGCAAAAAGGAAGTCCAAAATCTAACTACTGGAGTTAATAAGCTGAAG
ACTGCTTTAAACACGACACAAGTTGTTCTTAAAGTTGTTCCACAAAGTAT
CAAACCACCTACACTTGACAGATTGGAATTAATACGAGTACAACTTATTG
AGAAATTACAGAATTTATCATTCAACAATAGCGATGAAAATGACGGTTTG
AATAATGAGGGGCGTGGTCAAAGAGGGCGACGAACCTTACCTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016105XLOC_016105Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028431-exon-sc0000678-1575043694:31546..31905TCONS_00028431-exon-sc0000678-1575043694:31546..31905Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1575043694:28681..29077TCONS_00028431-exon-sc0000678-1575043694:28681..29077Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1575043694:28055..28226TCONS_00028431-exon-sc0000678-1575043694:28055..28226Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1575043694:25551..26266TCONS_00028431-exon-sc0000678-1575043694:25551..26266Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1510915933:31546..31905TCONS_00028431-exon-sc0000678-1510915933:31546..31905Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1510915933:28681..29077TCONS_00028431-exon-sc0000678-1510915933:28681..29077Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1510915933:28055..28226TCONS_00028431-exon-sc0000678-1510915933:28055..28226Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1510915933:25551..26266TCONS_00028431-exon-sc0000678-1510915933:25551..26266Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1491911889:31546..31905TCONS_00028431-exon-sc0000678-1491911889:31546..31905Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1491911889:28681..29077TCONS_00028431-exon-sc0000678-1491911889:28681..29077Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1491911889:28055..28226TCONS_00028431-exon-sc0000678-1491911889:28055..28226Clytia hemisphaericaexon
TCONS_00028431-exon-sc0000678-1491911889:25551..26266TCONS_00028431-exon-sc0000678-1491911889:25551..26266Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028431-proteinTCONS_00028431-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000678supercontigsc0000678:25551..31905 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.840002	0.9983	0.279752	0.27372	0.158773	0.0418216	0	0.0472363	0.104096	0.154728	0	0	6.30036	7.21803	0	0.023915	0.33703	0.134682	26.8397	72.9655	0.90771	0.813045	1.24654	2.85866	3.34224	3.76409	12.0856	10.9672	0.249001	0.223507
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028431 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top