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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028426 ID=TCONS_00028426|Name=TCONS_00028426|organism=Clytia hemisphaerica|type=transcript|length=1751bp
TGAAAGCATGCCGCGGTAGGCCGGTTGAATGTTATGGTTTGAGCTACATT
GTAAAACTTTCCGATGGGTGTTTTATTGATAGATATTTGGATCAAAACGA
GGATGATTTTTTCACGATTGAATTAGAAATTGTTAAAATCGAGTAACTAT
TTACCACAGTCGATGGGTGGGGGTTCATCAGCAATAGCACCCGAAGAACA
ATCAAACAGATCATGTGAAAAACgaagtaaaaaatcaaacacaTCTTCTT
CAACATGCTGTGGTTGTTTTTCTATGGACGGACATTACAGTGAAGATGAG
GAGGACATAGAAAAAAGgacGCTAAGAGAAGAAGCACGGTCATGGGCAAA
TAACTTTGAAcgattactaagacataatgttgGACAAAAAGTGTTTCAGG
AATTTCTACAAGCACAATTCAGTGACGAAAATTTACGTTTTTGGATTGaa
gctgaaaaatatttgaatatgACAGAAGAAGAACGAATGAAGCGTGCCAA
ATCATTGTACGAAGATTTTGTTTCATCAATATCACCATGTGAAgTTAGTT
TGGATGCATACCATAGAAATCAGATTGAAAAAGAAATGGATACAGCCCCT
AAGAACTTATTCAAAAATGCACAAGATTATATATATTGTTTGATGTATAG
AGACTGTTTTCCNTCAAAAATGCACAAGATTATATATATTGTTTGATGTA
TAGAGACTGTTTTCcaagatttttaaaatcaaaactgtaTAAAAGACTTT
GCCGGTGATCTGTTAATGTATAGATTGTCATTCATGGTGTATTGAGGCAG
TCTTATTAAATGCTGACATAGATTCTGGTATCAAAAAGCTATTGCAACGA
GCGGTGATAATGGCGTGTATGGTTGATTCTTGAGACTCTTTATTCCATTT
GCTCATACAAAGCTTCGATATCGCTGTTGTATAGTTGCTGATGTTTCAAC
GAGGAATACAAGTCTACCAATACAAAGCATTTGAAAACCTCAGACAACGA
AGCATTTAGTGTCAGAGCAAACTCCTAAATACAACAGCTCTATACTCTTT
CAAGAGAGACAAGAAAAGTATGACTTGGAAATGTACATTGCCAAATGTTT
TAATGATTGAAGAGAGATAAGTATTTCAGGAATTTAAGATAAACATCACC
TCAATCAAACTCAGACTCAAAAATGCTTTGAACGATTTGTCCTTTTACGT
GATAGCTAAAGTCGTGCTCAGTCGCCAAAAATTTTAGGTCAACAGTAAGG
CGATAGTATAATGTGGTCTAAAGTCTATTCGcgataagtgtgcacttttt
tttcttttacctataaatcttgaaagaattcttcaatctttataaatttg
gtatcattggaaagatattagtgagtggaacaatttggaatgaaaaaact
tttaaaaatattctaaagatgaagatgaaaatgaggaagaaaaaaatgaa
gatcttgtagaaaagtgctacaactatcattttcactgaggtGAATcttt
gatcatcgaacgtcatccctgtgaaaaaaattctcaaaaataatcattca
gtcaaaagatataaaacaaagttataagctgattgacgtttaaaaacgct
gttttctgcagttttttgccgttttttggggtcaatcacttattaacttt
gtatcataactttatatttaataaatattttaatgaaatttcttcacagt
gataatctcctaagatcaaagaatctctccagtgaaaatgaaagttatag
c Run BLAST on NCBI transcript from alignment at sc0000678:90965..108120+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028426 ID=TCONS_00028426|Name=TCONS_00028426|organism=Clytia hemisphaerica|type=transcript|length=17156bp|location=Sequence derived from alignment at sc0000678:90965..108120+ (Clytia hemisphaerica)
TGAAAGCATGCCGCGGTAGGCCGGTTGAATGTTATGGTTTGAGCTACATT
GTAAAACTTTCCGATGGGTGTTTTATTGATAGATATTTGGATCAAAACGA
GGATGATTTTTTCACGATTGAATTAGAAATTGTTAAAATCGAGTAACTAT
TTACCACAGGTAATTGTATTGTTGTGTCTTTTTAGcattgaatttaattt
ttttggaaaggtagaaacataaaaagttttacattttttctccatgattg
aattattttatcattattGAAAAATGAAGTAATTTCTTTAGAATAAGACC
TAAATCAATCTTACAGTAATCAAGcttaaagattatttttgaaCCGCACC
AAAAGTTCTGAGGACTGTCTAAACTTGAGCTTATAAACAGGAGCAAGAGT
TATCTATTAAAAAAAGTCTAGATAAAGATCAACGCACATCCCTTCTTCCT
CGTATgggaaaaaattaatatttgctatacgtttttttataagaataaac
tatataagaacataaggcttcaatggtcAAAATGCTaacaacaagttaag
aacattttaaggcttggaggactcgaaaacacccgattttataggaaaat
gggtaaaaatggttataaaatggagaaaataagaacattttaagaatatt
tttaggcttaaaacccaaaaagttaagaacttccaaggcttcaaaatttt
ggatgttcttataaagaaattatgTATGTTAATAATTTCGTACCTTGGAA
CCGCAATAAAACTTTGTTGATGGTTGATGTTTTAATACATAATCCTTTAG
ATAAACAAGTCATTTTCCGTGGAAAATACAAGGGATTCTTTTTGCTCATT
TCCCTTGGGAAATATAATACATAGATTGTTTTGGTTATTACCCTTGGAAA
ATTTAATTTCACCAAGTAACTGACATTTACACTGATTAAGGAAGATATCA
TTTTTGAtgttactttaaaaaaatattcatgaagACGACCTTTTCTTGAC
ATACCCAGTATTTTCTTCTAAAATCTGCAACATACTTAATCTCAAGCTGA
AAGCGTGCGAAAGGAGCATAATCATCCGATATTGGATATTGTCTCGAACG
ATGTCgggaagtatttttttttcgtcaaaggttttgtttttgaataagag
tgatatcgtttgctcttactcataagttttaatttacaagctttttcacg
ttGAATTGACGCGCATGTGGAGAAAGATTGATCATgaagaggaaaaagaa
aaacatatttcttttcattcagcacaatataacaatatgaAGACACCGTC
CTGATTTGAAATATGCGTGTCTGATATAaaacaggaacacttatgtaaaa
taaaacctttgaaCTGCgtaaaaaaatttaacttaagGTGTCTCTTTGGA
CATCCATCAAAAGGGAGAATAGTGAGGGAGTTCTACTATGAAACATACAA
AAATCGCTCAGAGGTGGGTGTCCTTTTCGAAAGTCATTTGAAAGATACTT
CTTTAGAAATATgacattttgaattaaaaaaatagacGGACATTTGTAGA
AACTGTTAAAGGTATTAATTAAAAGAAAACAGAACggattgaaattaaaa
tgttAGAGGGTGGTCAACGTGTACATACATCCGTCAATGTGAAGTCATTT
ATATTTGTGTAGTTTTTGATGTTgttagagtcgatattttacgtggatag
cccagtaatctaggacttttagacagtctttcaattattttcacggggtc
cacggccagagccggctatctatgaactgaacggaacaggAGGAAGGAGT
GGggattcgaatcacgaatccctggtttgagaccccgctgacgcctttga
ccgcTTGGTCATCGCTCTGTTAAAAACTATATATTCGACGCTCACTTTAA
GAGGTCATCTTCACTACCTCTTGTAATGAGCGTTGAATATGAAAAAACAT
GAAGCTTCTGGTTATTCTTTTTATCATTAAATTAGTCGCGCATggaaaca
tttttcaatttatgtTTGTACGTTGAAATAGCTACATTTTATGAGAAGAG
TTATAGTTAAATATGTACAGCTTATTTTACTTTAGATTTTAAGGGACTAA
CAGCTTGATTTGTATAAAGGGAGGGAACCCATGCGGTAAACCTCTAGCTA
TGATAATTGGTCAGCCtcggtgacccttcaaatcggttccgcgatttttt
tcccgctggtgAAGCTCtggatcaaaattttgaaacttttaaatcCGATT
TCCGATCTctctttgatttctaaactttcttccgatcgggttaacttttt
gggtacttttagcgtgtgttgtttttaacgatcataatgtggtgtttcaa
gatggcggctcaaacCGATAAAGTGTTgttccaaagtatttccagtgtga
ATCTGTTtgtctgttgcaagcttcaatttctgtcatttatttttctaact
tggcaaatcaaacacattattttcatcaaggggattctttttctacatct
tttgaaggtttaaagccgtttgctcaagtttttgtttatgttgaattttc
tgatactttttattgttgCTTTTTATCACAGTACAGTAgctagtttttgc
aataaaaacatatttttcttgtttgcctttagaggggggattgatggtgt
tataatgctattggaatttgataaagtatacaaaagtacagctactgtct
aaatttgataaagactggatgcaatcgtgtttNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNttttcttcattaaattttcaaaagt
gcaCACTGGACTACACCGGACTGTCTGGTACATTTTTCTCTCGGAGGAAA
CAAAGTACACCAGACACTACACCGGAACTTTTGTCCAGTGTGATTTATCC
ATATATTTGCGCACCTGACAAACTGCACCGGAATGTCCTGTGTATCAtgc
atgccatgtgaggggaattgggtagtcagtccaaggtgctgacgggacac
TAACTTGGTGTCTATAGTTGATAATATAATAGGCTTCTcggcctcctgca
actcaaccacaTAGACATAGAGACATAgacgtaaatcagggtcggtcaga
tgacgggaaccaaatgatgacgatcacatctcctattattggacttgcaa
aattataacaaaatggtctttggaatttgatcaatatTTGTCCTTTGTCC
ACTTCTTCTTTCAGTCTGCGCCACAATTAGTTTTATGGCGTGAAATGCTA
GGCAATTCGATCTGCCTAGCCAGGGTgtagtatgcagtgctgacgagtcc
taataaggacgaaatgcataatgctgctctgccacctaaatctcctgaaa
gaagatattcggacagaaattctttgaatttctctACATATATACAGTTT
TTTCTGATCTTTGCGCACGTTTTTGGCTTCAACTAAATGGTTGAtatgga
atagaccttttttaaaaaaggacgtcctgttgaataattatgtactccag
ccataaaaacaatgatagagtcatgcataattactgtatcatgcatattg
taataattatgcatggttttatcattgtttttctgcNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATcggacttgcagaaagc
ggactgcggAAAGTTATGAGAAATGGtttctagattttttaatgAAGTAT
ATATACCAATAccatcaagttacacaacatggcCACTATCTGGCAAATGT
GTTTTTCTAGAGTGCGGTTTGTGACTACTGTAGCTTAAAATTGTTAATGG
CGACCAGTTACAATTTCTGGTAGGAGCTGCAGAGAATTGTGACATGACAA
GGTATTATATATTGGAATTTGGTAAAGTATacagactaaaattgttcctg
ctttagaaatttatgaaggataaaaatatttctcacaAAGTTATATATAC
TGAAGATGTAATATCAGTCATTTTAAGGAAAGGAAAAGATTTGATATATA
AGCAGCTTAAAAAGAtctaaattaaaaagaaaagaatgttTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTG
AAGATTAtacattttttgatttattatttttttgaaatcattcCAATATC
AGATGAAAAATACAATAAGAAAGATTGACTTTGAAACAAAAGAGAGATTC
AATTTAAAAGAATGAGAAACACAAAACCACCAAATAACAACTCTCAACAC
ACAtattagtccgggagccaaatcctatatctccttaaataagcactttt
gcttaacccaagattctacaggataaactatacatttttggaatcctcaa
ctatcctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNatgatataatttgctgtatctagtcaatcagttga
ccaattgctttgaaactttgcaaaaagtttgaaggtaggctgatgattat
tttNTgtgaaaaactatttttataggtttgcctggggaaaaaaaggggaa
atttgggtattttaactaaaatttgaccctttttaagtctgggacctacc
caaacaacttttaatgagacacaaactaggtgttatgatagaccttgttg
atgcaatacatcagaaaaatttcaaacagacagtatttagtattatttca
gggctgcagggggtaaaattgcccatttttatgggtttttaccttatttg
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNttgagcaattttcaccactaatcttggttaaaacgtcat
caaaaatagtttaaacttgattttcgtgtaatatatcctgaaagattaca
atgctgacttaaaaaacaaaaccagggtgcaaatggacaaaccagggggt
aaaaatgcccattttaggcgatttttatcgtttttggacttatttcaccc
ataaagcggttttatcccttttatggtgtaccaattttatttctgaccac
tcattttgtagtaggagcaatgggaaagttatttgtggttttcattgtct
gtaatcagggtcactgtgggcaaatNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTA
AAAACCAGTACAGGGACCATTTTTGGAAGCTttgaatagcaatatagtgg
aatttcaaagcaaaaactgacaaaattacgtcaaaataatgttataattt
ggccataacttaagttaaatccatcattattttgtgtaggttgtcaacaa
aagtattaagaaatgactgaagggtatataactggtttccatctcaaaat
ttcataaatttgaggctaccatacaataaaaacatccaaattcaggcaac
aactaccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacagacaatgaaa
accacaaataactttcccattgctcctactacaaaatgagtggtcagaaa
taaaattggtacaccataaaaccgctttatgggtgaaataagtccaaaaa
cgttaaaaatcgcctaaaatgggcatttttaccccctggtttgtccattt
gcaccctggttttgttagttttaagtcagcattgtaatctttcagggtat
attacacgaaaatcaagTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTAGACTAACTAACATCCCAAACGAGTGAGGTTCCTG
GACCTTTCAACCGGCAGCTAATTGCAATTGTATCGAACGCTGATCTAACA
TTTGCTCGcatctcatcaaaattatcccTTTCACCCCTTTCACCCTCTAA
CCCTTAACCTTCTTAGCTcttttggctgaccttccagcctcggctggttt
attttatttctttttgtcagcagaaatcaaagtttttatacTTTAAACTA
TCGGTGAGCAAATAATTACAGCTTTTATAGTTCAGTTATGATAGAATTTA
CATAATATAATTTAAAGAAAGGCGTCGGGACTCAATGTATATATTGTGTT
GTCTGCAGCTGAGACGGTTAGCTTCTAACTTGTCTTAAATCCTGACTGAC
TAAGAATAACGGTgattatcggcgatccaaaaaatatctgcaatctgatt
ggttaaaaagagtacaaaataTCTTATATTAGCAGCAAtttaacgtcact
ttgctacaaaagtgccttGCGTTTtcttccaacacaaaaagtgcattttt
tgggtcaccgataaaccaattatcagacatttgctggtacaatatgaaaa
tattttactcgttccggattctccgtatattttcctcacctaaaggctcg
gaaaatattgtacagAAATACTCGCAACtttccgataactattacatatg
cTTTTATCGTGTTCGATTTTGTGTCCTTTGGTCTTCTGAATCGTTTCAGT
CATTCGTCTTCTGTTTCTCAAAACATGAATAAACTTGTTATATGATAGGT
TTTTTTATGAGTTATGTTAGATCTGAAGATGCTCTACCATAGAGTAGgga
gaaaatttatcaataaataaataatttttttgttgtttcttgcctGTGAA
CCATCCAAATATTCAAGTTTTAATGAATAAACTAAATATTGCAAATGTTT
CCTGAAATCATGAAGTATATTTCTATAGCTGTAAACATCTAAGCATTTAC
ATATCAGAACTGTGAAATTAAGTCAAAATTGAGACAGGCTTCTTGAGACA
GTTACTATCCAAGCCTTGGTTTTGAGTACATAATGTAAAAGTTACAGCTA
AATTAAAGTTAAAACACATACAGTAAATttacttaaaaatgaaaatttct
taaaTTGATAGTCTAGATTTAGActactaatttaaaactttatacTAAAA
TGctactaaaattattttaaactaTTAAGAAGGACGCTCTCCAGAGAGAG
CGGTTTATGTTTATGGCAGACTTACTATTTTGCGGCTTTGTGGCAGAGTT
ACCGTTATATAATGGTCAGGAAATCGAGACTACTAAATTTGGTGTCTTAC
TTTtctacaatccgtgccataatatatttgcacttttggctaatttatca
tttttcgaaaattgaagttcgagcaagaatgtcaattttaggccctcaac
ttgatttcatcgattatttcgatctgggagggatttattggtttctaggc
tatatttcaagccctcctggaccatttttgaacttttggatNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgaacctactttag
agcacttacaaatcgattgtggtttcaaaacaccccggtgaatttccctt
ttgttccaagtattttgtccctgattgtatcttcttgattttcttcttct
ttttcgttGACAGTCGATGGGTGGGGGTTCATCAGCAATAGCACCCGAAG
AACAATCAAACAGATCATGTGAAAAACgaagtaaaaaatcaaacacaTCT
TCTTCAACATGCTGTGGTTGTTTTTCTATGGACGGGTAAGTTGTCCGGGT
TCGGGTGGGAAACTGGTacacatttcttttataaacaaCCGAGTTTCTTA
CTAAGAGTTCGCCCTGAGAATGGTAAAAAATTAGGCAACTTGGCCTTTGC
AACCTAGCCCTGAAACTGAGCATGAACCGGGAAAGCAaccaaaaatatct
aaaaatgaagcattttcgGCATTATTTGTTTGGCATTAAATTGTGCACCG
ATTTGGATATTTTggatatataaaataaaataaaaaacaaaatttttgaa
tttgctaagcatttttggcataaaatccatactctcgggtacctaatagc
cgtcccccccccgctaattaatttttcgaaaattttccacccaggacatt
cttattccaacccccccgcttattaNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNcccacccccccccccgcttattaaattttg
aaattttttccaacccccctgcttattccaacccccccggctattaggta
cccgagagtaagcaattttttggctcaaatctgaaaaattcttaGCAACT
CCAGCCCTGAGCCGAAAATTTGAGTTGCTTATAGAGAAATGTGTATGCGT
GGAGAAAAATAGTTACAGACATTTTTCTTACAATTTATAttccaaatttt
cgaaaatccagaTTTCAAAAAACAGTAGAGTGCCTGCATAActtgaacac
gcacggggaacgcaaatcttttcgagttaaggaaatttggagtaatgatg
gagtaaggtttataaggcattgttaactgcaGGGACAATATAaagtttgt
tcgagttaaggagaaattcgagttatagaggtttgagttaaagagactcc
acttaGTGACTTTTTTAGGAAGGAAAATTTGTTTCCATTGTCTTGATTTT
AGACCCCTTTGGAACAGGCTATCTGTTTTTTTTGGTAGAGATATTTCGTG
GTCCGGAAGAACCCTTACCGAGTGCAGATATTCGATTCCCCTTTTGCCAG
ATTCTCCCCTGGATGTCCAAGTCATTTAGGTGTCTAACCTAATGTCAGTC
GTGGTCCATTGTATTGATTGAGCCCTTTCACTTCTCGGAGAAAGGTAGTA
CTAAGATGGAAGGCACAATATTTATTAGTCAAATCGATTAGGCGTGCATG
CAAGTCCTTCAGGATAATTTTCTTGAGCTTGATGATCAGCTTTTCATTGA
TTTCATCTTgactgtttttattttctatagACATTACAGTGAAGATGAGG
AGGACATAGAAAAAAGGTAAGTTGACCCAACTCACCTTTATAAACCATGG
ACTAAGCTagtatccgccatctttgatcggaattTATTTGgaagtacagt
tgacgctctctaattcgattttgaaGGGGAATCTGATTTTTagcgaataa
gggagcgtatcgaatagtagagcgtcgtttataagagtttcttgttgaca
gggactttcaatattttatcgaataatagaacgtatcgaatagtagaccA
TTGAATTAAGAGAGCTTCAACTGtagtacccgtaaagaagccactGTATG
TAGTGGCGCCACATGATCACAATTATTTAAGGAATGTTAGACCTAACGCT
CTCGATGTGTTTACACCGCATTTAAGTATACCACTTCCAAAATCTTCTCA
GGTTGGCGTACTGCCAATTCTGATTTGGAATGGATATTAAATGTGCTTTT
AAGCGTGTTGATTGGCTTCAGCAAAGGAATCTCACGAGCGGTATAGGCTT
TTTCAAAATCTAGGAGTAAGTTGGATCCTCTCTGACTATGTAtatcttat
tcttttatagctTAAGAAAAAACCTAAAACTGTATTTATGCAAAGGAGTG
GCGGGGACCTCATGCGGCCATTTATTTGTGTCTGGTACCCTGAAAATGCA
ACTTGCATTTCGGAATGGTCTTGAACATGGTCTTTTTACTTTCacccgtt
ttttttttaaggacGCTAAGAGAAGAAGCACGGTCATGGGCAAATAACTT
TGAAcgattactaagacataatggTAAGTATTGCACTCGTTATTACGTGC
CATTTCAGCTGATCTTTGATATCTTCTAATTGGCGAGTACTCAAGAACTT
TTTAACGGACTTTTGAAGTAGTAGTAGATTTTTTAAGTAGAACCTTTTGG
TATAATGATAAAATAAGTTATTCGAGTTTGAAAccttaaaataattgaaa
aaaatgctgACTCAGCCGTATTTGTCtactaaaaatgataaaaaaacttt
tgacgTATAGTAGATATGCCGGGTAGATATGTCAAATAAAAGCTTGTTGG
CCATGGGCACTAAATATTATGTTGCttaatcttttattttatagttgGAC
AAAAAGTGTTTCAGGAATTTCTACAAGCACAATTCAGTGACGAAAATTTA
CGTTTTTGGATTGaagctgaaaaatatttgaatatgACAGAAGAAGAACG
AATGAAGCGTGCCAAATCATTGTACGAAGATTTTGTTTCATCAATATCAC
CATGTGAAGTAAGTTATCAATACTCCAATTCCATTTTAAGAGCTGTGTGC
GCCCTTAACCATTTCAGCCGAAGACCCAGGCCACAATACCGAGTGTTTAT
AACAACAGTTTTTTGACCAGAGAGATCgtattttatatttattacaTTAA
AATCTTCAATAAGACGACGTTATCTCTCAATGCGGAGTTTGCAATTGGTT
ACAAAAGGCTGAAAGGAAAACTTTCCGGGGAGGGGTCAAAATTATCTAGG
GGAAATCTCATAGAATCTTCCAAAAGAATTAAGTTTAGTATTTTAGTCTG
TCTgttcatggaggtataaagaaaaacaggagttgaatgtgttggtaatt
ggtcgttaaagtcttttgatttcttttataaaatgtatcaaaagaaattc
taagctcgcccgatgagactttttagtagaactcaagtttgctctgaaca
ttctaattatcagtattgaagattctaaccttttaatatacgaaaattaa
ataaaacttcgtccacgaaacaagtttatgttctatttcgttatccgttc
aattttgttttgaaaagatattttctcaagccagaaaatgaaaagttctt
tataagcacactcgatttcagactcaatctgtagacataaagtcgctgga
gaattttagaggaaagtatcaagcaatagagttaaccttaaagaaaacat
tgatcgaaaaatcttattattTGACGAGGGATTGCCAAgtccttttttta
gtccaaatattttcttacactgatgtcagaaacaatgaatctcgtctcat
ctaatttctaaagcttaaatgagccaataagatttcaccaatgGATAAAA
Aacctcattaaaaatgcacgatatatgagattatgagcatgcatacatcg
taacttttttaatcgtagggcaagcttggttacaatagcataagTACTtt
tcctgtttctttatacctcgtGGTCTGTTGAGTGTGTTAGTCTCTCCTAA
TAAGCTGATATTAGATTATGATTGTTTTCTATCCACCACGCTGTAGCTCT
AAatggatgggtgaaaacataacaatctgacgaatatctATCTCAAAATC
GTTAGGACCGCGATCATCTAGggctgggaatgacaacaaagtagCGTGGC
TGTgtttttatgaatagggcgccgtatgaGGAAGATTtgcaacaagattc
ttgttgtagtaTTTTCCGTGGGAGGACTAGTGAAAATAGTGAAACCCACT
GGTCCACAATTTATCCAAGGATAACCGTCAACTGCATATGATCCGGACTA
TCTTCCTTAATTGTAAGAAAATTATGGCCAGTTGTTATCAGGTTATATTC
CTAGACTGATGGATTATGCTAGAAAGTATCGATTCTCGTATTATGAATAA
CCTAATCGTTTAGTTTTTCCCTATGTTTGATTTGATACTTTTGATGGCTT
TTTTACCATAACCATAAGAAAATCATGAAGAAATTTGACGGCACATAATG
CCTCTTGTCACTTTGTAAAGTAAAATTGTCTGAAACTTGAAACGCTCCTT
TGAAAAACACAATACCCTGTTAGTCTATAATTTCGACGATTGGACATTTT
CAATCACTGCCAGGCTGTTAAAGTGGggaggctcaaaatgagatgaaatc
tGCTAGGGATTTGAGAAAAagatctcatttgctcaaaaatgggaaggctg
aagtctccccaacCTTCCTTCTTCCTCAGGGCCTGAGAGCAATTATGAAA
GATTATTAAACTTTATTCATAGCGATGGGGTTGAATAAAATAGTAATCGG
ACATTCTCAAAACATCCGAAAAGTTTTCAGCATAATGGTTGACAATACTA
AGGATTTGTGTAGACATTGAAGTCCAACCACATTCGCTGAGCTTTGCTCT
TCCTATGTCGCTTACCAtggtccgtataaaaaaccccagaagccttttgt
ttctttccatttttacttacttgaacttgcgttgagaaattagtttgttt
tgctcactttttgatcatgtgattaaatcttaaaccaatcccaggaggag
tacttggtaacgtgatcaaaagtttagcaaatcgattttcatcttttgaa
aaagctaacaaaaagttaaaacaataagcttccaaaCCAGAATTTTTGTA
TACGGATTATGCTCTTACCTATCATTGAGTGTCAAAATATATATCATAAA
TTATTTACTGCAGCTGATGTCTCTCAAGCATGTCATGTGCTGTGGTTCTT
GCACCTTCAGGGGGAATGACCCAACCCTACAGCTATGAGAGAAATAATCG
GCCTATATCTAACTTGCCATTAAattcatatttattttcatttcataggT
TAGTTTGGATGCATACCATAGAAATCAGATTGAAAAAGAAATGGATACAG
CCCCTAAGAACTTATTCAAAAATGCACAAGATTATATATATTGTTTGATG
TATAGAGACTGTTTTCCNTCAAAAATGCACAAGATTATATATATTGTTTG
ATGTATAGAGACTGTTTTCcaagatttttaaaatcaaaactgtaTAAAAG
ACTTTGCCGGTGATCTGTTAATGTATAGATTGTCATTCATGGTGTATTGA
GGCAGTCTTATTAAATGCTGACATAGATTCTGGTATCAAAAAGCTATTGC
AACGAGCGGTGATAATGGCGTGTATGGTTGATTCTTGAGACTCTTTATTC
CATTTGCTCATACAAAGCTTCGATATCGCTGTTGTATAGTTGCTGATGTT
TCAACGAGGAATACAAGTCTACCAATACAAAGCATTTGAAAACCTCAGAC
AACGAAGCATTTAGTGTCAGAGCAAACTCCTAAATACAACAGCTCTATAC
TCTTTCAAGAGAGACAAGAAAAGTATGACTTGGAAATGTACATTGCCAAA
TGTTTTAATGATTGAAGAGAGATAAGTATTTCAGGAATTTAAGATAAACA
TCACCTCAATCAAACTCAGACTCAAAAATGCTTTGAACGATTTGTCCTTT
TACGTGATAGCTAAAGTCGTGCTCAGTCGCCAAAAATTTTAGGTCAACAG
TAAGGCGATAGTATAATGTGGTCTAAAGTCTATTCGcgataagtgtgcac
ttttttttcttttacctataaatcttgaaagaattcttcaatctttataa
atttggtatcattggaaagatattagtgagtggaacaatttggaatgaaa
aaacttttaaaaatattctaaagatgaagatgaaaatgaggaagaaaaaa
atgaagatcttgtagaaaagtgctacaactatcattttcactgaggtGAA
Tctttgatcatcgaacgtcatccctgtgaaaaaaattctcaaaaataatc
attcagtcaaaagatataaaacaaagttataagctgattgacgtttaaaa
acgctgttttctgcagttttttgccgttttttggggtcaatcacttatta
actttgtatcataactttatatttaataaatattttaatgaaatttcttc
acagtgataatctcctaagatcaaagaatctctccagtgaaaatgaaagt
tatagc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028426-exon-sc0000678-1491911889:90965..91123 | TCONS_00028426-exon-sc0000678-1491911889:90965..91123 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:90965..91123 | TCONS_00028426-exon-sc0000678-1510915933:90965..91123 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:90965..91123 | TCONS_00028426-exon-sc0000678-1575043694:90965..91123 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1491911889:101478..101599 | TCONS_00028426-exon-sc0000678-1491911889:101478..101599 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:101478..101599 | TCONS_00028426-exon-sc0000678-1510915933:101478..101599 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:101478..101599 | TCONS_00028426-exon-sc0000678-1575043694:101478..101599 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1491911889:103295..103330 | TCONS_00028426-exon-sc0000678-1491911889:103295..103330 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:103295..103330 | TCONS_00028426-exon-sc0000678-1510915933:103295..103330 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:103295..103330 | TCONS_00028426-exon-sc0000678-1575043694:103295..103330 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1491911889:104026..104087 | TCONS_00028426-exon-sc0000678-1491911889:104026..104087 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:104026..104087 | TCONS_00028426-exon-sc0000678-1510915933:104026..104087 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:104026..104087 | TCONS_00028426-exon-sc0000678-1575043694:104026..104087 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1491911889:104409..104572 | TCONS_00028426-exon-sc0000678-1491911889:104409..104572 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:104409..104572 | TCONS_00028426-exon-sc0000678-1510915933:104409..104572 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:104409..104572 | TCONS_00028426-exon-sc0000678-1575043694:104409..104572 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1491911889:106913..108120 | TCONS_00028426-exon-sc0000678-1491911889:106913..108120 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1510915933:106913..108120 | TCONS_00028426-exon-sc0000678-1510915933:106913..108120 | Clytia hemisphaerica | exon |
| TCONS_00028426-exon-sc0000678-1575043694:106913..108120 | TCONS_00028426-exon-sc0000678-1575043694:106913..108120 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000678 | supercontig | sc0000678:90965..108120 + |
Blast
BLAST of TCONS_00028426 vs. Swiss-Prot (Human)
Match: RGS17 (Regulator of G-protein signaling 17 OS=Homo sapiens GN=RGS17 PE=1 SV=2) HSP 1 Score: 93.2041 bits (230), Expect = 3.581e-21 Identity = 46/124 (37.10%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 328 EEARSWANNFERLLRHNVGQKVFQEFLQAQFSDENLRFWIEAEKYLNMTEEERMK----RAKSLYEDFVSSISPCEVSLDAYHRNQIEKEMDTAPKNLFKNAQDYIYCLMYRDCFPSKMHKIIY 687
EE SW+ NF+++++ G+ +F+EFL+ ++S+ENL FW+ E ++ +E+ K +A+ +YED++S +SP EVSLD+ R I + + +++++AQ IY LM+RD FP ++ IY
Sbjct: 76 EEVLSWSQNFDKMMKAPAGRNLFREFLRTEYSEENLLFWLACE---DLKKEQNKKVIEEKARMIYEDYISILSPKEVSLDSRVREVINRNLLDPNPHMYEDAQLQIYTLMHRDSFPRFLNSQIY 196
The following BLAST results are available for this feature:
|
