TCONS_00028338 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028338
Unique NameTCONS_00028338
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length146

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028338 ID=TCONS_00028338|Name=TCONS_00028338|organism=Clytia hemisphaerica|type=transcript|length=146bp
GAGGAATAAATGGGAATCAAAGTATACGGTCAGACTGTAGGATGTTTGAA
TGTAGAGGAATTACACCATGTAGACTGTTGAATCGCAattaaataaagag
aaaatgaCAAGGAACAACCAaaatgtttcgAATAATCGAATATGGG
Run BLAST on NCBI

transcript from alignment at sc0000674:38250..38722-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028338 ID=TCONS_00028338|Name=TCONS_00028338|organism=Clytia hemisphaerica|type=transcript|length=473bp|location=Sequence derived from alignment at sc0000674:38250..38722- (Clytia hemisphaerica)
GAGGAATAAATGGGAATCAAAGTATACGGTCAGACTGTAGGATGTTTGAA
TGTAGAGGAATTACACCATGTAGACTGTTGAATCGCAATTAAATAAAGAG
AAAATGACAAGGAACAACCAGTAAGTAAAATTCTACCAAGATCTTTGGGT
TGTAAAATCTTTCCCTTCTTGCCCTTAAAGGTTCTTTTGTACATTATCTA
TTTTTTGCGAGGTTTACCAAATTTAAAACAAAAGTCAAAACAAGTCGAGA
TATGGAGAAAAAATCCATAAAAGCAGGCAGAATGTCTGAAATTTTCAAGA
AATAAAGACTTTTGAGCAATCATTTCAAACATCCCTGTCTTACAGCCCCA
GTGGATTTTTTTCTCGCAGCGGGGGTCGAAATCTCTATCTAAATTCCAAT
GGGGGTGTTTAAGAGCTTGATATTCACATTTTATTTTCTATTTTTAGAAA
TGTTTCGAATAATCGAATATGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016056XLOC_016056Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028338-exon-sc0000674-1575043694:38603..38722TCONS_00028338-exon-sc0000674-1575043694:38603..38722Clytia hemisphaericaexon
TCONS_00028338-exon-sc0000674-1575043694:38250..38275TCONS_00028338-exon-sc0000674-1575043694:38250..38275Clytia hemisphaericaexon
TCONS_00028338-exon-sc0000674-1510915933:38603..38722TCONS_00028338-exon-sc0000674-1510915933:38603..38722Clytia hemisphaericaexon
TCONS_00028338-exon-sc0000674-1510915933:38250..38275TCONS_00028338-exon-sc0000674-1510915933:38250..38275Clytia hemisphaericaexon
TCONS_00028338-exon-sc0000674-1491911889:38603..38722TCONS_00028338-exon-sc0000674-1491911889:38603..38722Clytia hemisphaericaexon
TCONS_00028338-exon-sc0000674-1491911889:38250..38275TCONS_00028338-exon-sc0000674-1491911889:38250..38275Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000674supercontigsc0000674:38250..38722 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00028338 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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