TCONS_00028278 (transcript) - C. hemisphaerica

Overview
NameTCONS_00028278
Unique NameTCONS_00028278
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1027

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00028278 ID=TCONS_00028278|Name=TCONS_00028278|organism=Clytia hemisphaerica|type=transcript|length=1027bp
TAGTGTGGCACAATACAGCAATGAAAACGGAATGACAATAGAGGAACTCG
CCAAAGTGTTCAGCTATCTCGTTCTCAGACCTCGCGAGAAAGATGGAAAA
ATTTTCACCGAGAATCTTGATATCCAGATACTTGCTTTCATCAGGATGGT
GAGAGCGTGCGAATCTCACTTCGGTGCCACCTCGCTGGCTGAAgATTTCG
ACGAATCGAAATGGCTATGGCCCGAAGCAACACGGAAAGACGTCACGATG
CGTTTGAGTGGCACGCCTGACGGATCGTTTTGTATAAGACAGTCGGAACG
ATGTAGAGGCGAATGGACATTAACAGTCAGGAAAGAGGGTCGCGAAAGAC
TCATTCGTATCATACAACGGAACCAGAACGGCGCCCCTTGTTTCGGCTTC
CGTGAAGAACTTCTCAATTTCGGTAGCTTAGAGGACTTGGTTTTACATTT
CCGTGATAATTCGCTGGAAGATTACAACTCCAAGTTAAACATCAAGCTAC
TGCACCCGTGCGGGAAACCTGACCAATTAAATaTAACAGAAGGTCAACAA
GACATGTTAGTGGACCAGGCGAGATACGAAGAGTTGGTGGAGAAACTCAA
TCACATCAAATTCATGGAACTGAAGCTCGAAGAACAACAATTGGCATTAG
AAGAATGTAAAACGTTAGTAGAATCGCAGACAGATGTGGTCAACTTCTTG
GAGGAACAGATGGAACTCGCTGAAAGGATCAAGAAAGAAGCTCCCACTAG
TGATAAGTCAGATTTGGAGAACAGTATTGTGAGCATGAAAGAATTTTTGA
ACATGGAGAAAGCGAAATGGCACGAGATGGATGATATGTTGACCAAACTG
AAGCAAGAATGCGACCAGATCAGTACACAATTGACGGAGTTGAGTGCAGG
AGTACCTGGACTGACAGACGAGTATAACCAATTGGAAAGaTTATTACAGA
AGAACGATCCGAACCTGTTCGCAGAGAAACATGGGGAAGACGGACTCGAA
GAAAAAGACATGCAAAAATTCGAAGTG
Run BLAST on NCBI

transcript from alignment at sc0000672:116369..128058+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00028278 ID=TCONS_00028278|Name=TCONS_00028278|organism=Clytia hemisphaerica|type=transcript|length=11690bp|location=Sequence derived from alignment at sc0000672:116369..128058+ (Clytia hemisphaerica)
TAGTGTGGCACAATACAGCAATGAAAACGGAATGACAATAGAGGAACTCG CCAAAGTGTTCAGCTATCTCGTTCTCAGACCTCGCGAGAAAGATGGAAAG TAAGTCTCCATTATTGATTGTAACTGGCCACCGATTAGCCCCTGTGGATA GAATTTTGATTAATGCTGCTTTATAATCTCATAAACTAAAACAAGACTCT AACGTTCAGTCTACAAAAATGTTTTCGGAAGTCTATTTCAAAGAATGGGT CTTTCTTTAATTTGAAGAATGTAGTATAATTATCATTTATTGCTCACATC ATACTTTGTCTGTATATTTTCTGTTGGCATTTTGACGCCATTTTCAGCAA TTCCAATATTTTCCATAGTTTGGTTAATATTTTTAGTCGGTTGCCTTCTA AGTCTGTCTCAATGATTTATCGtagctcgaagggctagatctgcggcctt tatcgaaaagtgaagcaagttttggtaggatttcataccaaagaaatcac gtgacaacaagcaatttcactggtttgagagatgNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTCtgcggcctttatcgaaaagtgaagcaagttttggtaggatttcat accaaagaaatcacgtgacaacaagcaatttcactggtttgagagatgca aaacagcgtttgccgcctattttttttatctcgctctccgaaaacaatta aaatgctagatcctatccatcggcgcgaaattttaaaaaagtcaaatttt tgcttcacttttttttgctggagaaagcttaaaaagttgcctatctagcc cgtCGGGCTTTAAAGATCTGTGGTCTGAgacttcctaagaaattggtggg tttagagtccgcgaagcctaaaaatattcttaacttgctcttataatttg ttctttatattttggccatcgcAGGCTTATGCTCTTATATCGTTTTTTCT TATATGAAAAAAGTATTATAATTCAGATTTAGTGTATTTCATTTGATCCG TGTTCATTTAGTTTCAAAACCATTTATAAGTAAAGTAATAATTTTTTGAC CTACTTATTAATGGGTTGATAATACTTTTAATGGAGTTTTGATTAATTAC TCACGGTTTCTGCTAGAAGCATTTTATCATTAAGATATGTAATACCTTTT TAATGGAGTTTTAATTGCTTTCGCTTTCTAATAGAAGTATGGTATAGATA CCATTAGCATAAAACTTTAATCTACTTATGAATTCTGTAATCGATTAAAG AGTATGTTTGAAATCATACAAActctggttgttttttcatcggttgactc aaaaaaactttgatttgaACATATTTACTAAGCGATCCTCAAGGCCAAAC AGTTGAGTCCAATGTTATTTATCTTCCATTGGGTCTTATTAGAAAGTAGT CAGACTCTAACTTAAAACTTTGAGGTTTATttgttaatttcgcttagcga aagtattacgatagccttccgtgtgtctggctggcgagacattttttagg gcgcaaattatggcgtgggcgtttggctgNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtataaaggagtc aaagtttaatctcaaggagtattatttctttaaagcttaaagttggctag tttttaccctgcaattttctagtccagaagctggagctaGAGCTCAACTt cactcatttttttataagcataacgtttataagcatactgaagctcaaat ttccagaaaaattaagcatatgctaagcataccttgaggctcacccaaag aaatttttagaatcataatttcccaaacttcagaaaataacacaagaatg aagaagagagttacaaacaaaattcgaaaaattggtgattttattttgtt taatctcttataaataacacaacttGGTCTCTTGAGAATGTACACTATCT AAACTTACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNacgcgtcttcgtcgttgatgttcaagtattatgcgaaattttcgactt taagtcgtcttgttttagTTTGAATAAGTAGATGCAAAGTTGCAATGTTG CAAACTGTTGAGATGTTATAACTTATTATTAAAAACTTTTACAGAGAGGT TATTCAATGAATTAGCTTTTAGTTCAACCTGGTTCAACCAAGATTATGTT TGGCTTTAATGAGGAGAGTCAAATGTCCGAAGTTTCTTTCTTAGTCATCT GTTACTTAAATTAATGAATATGGAAAAGGACTAGTCCCggaaatataata ttttatacGCATgttgttctgttttttttttctcatatgAGTGCTTTTTA TTTCATGAGACATTTTTTTTCGTCTCTTTTTTAACGCGATCTTGCAGCAA AATACAATCTGTGACTAAAATTGTGGACTTTCCTTGGAAAATCCCTCCCC CTCCTAACATCAATGTTGATGAGAGGATTTTGTGGGTCCGGTGGCAGCCC TCAACCCGTCAACATTGATATTAGGGGTAAGGGAATTTTTGCCCCTAAAT TTTGACGGGTTGAGGGCTGCCACCGGAAGTGAATTTTTGCCACGATTGAG AGTCAGAGATGGTAGACTATATTCCTTAGACCTTAGTATCATTTTTTAGA TTTACCCAAAGTTACacgtaaaaaaacttttattaataACTCTTTATTTC TTGTTTATAGAATTTTCACCGAGAATCTTGATATCCAGATACTTGCTTTC ATCAGGATGGTGAGAGCGTGCGAATCTCACTTCGGTGCCACCTCGCTGGC TGAAggtttgtaaaagattttagttTTTCATTATACGGTCAAAGAGAGCC TAACAGAATTTTTaagcaaatattttttattgctaACAACCGAAAAATCC ACTTTATTTAATATTCATTTATAACTATATTCGTTCTTCGCTCAGCCGTC AGAAAGGATAGATGTTTATTTGGTCTTTGTTCTGTTCTAGTTTTAAACTG AAACTGGGTCTATGACACTGGGGGATCTAGGGTACCGCATTTCTGCTTAC ACTCTAATCTCAGGCAAAGGTGGAGTATAGTTCAAATTGATCAGAAAAAG CATTAGTCACTTATCAATATTTTTACGGTATTTATTTCTCGGTAGATTTC GACGAATCGAAATGGCTATGGCCCGAAGCAACACGGTACGTATCTTTTGA AATTTGTGTGGAATTTTCAACCTTGTGCTCCTACTTCGAAATGAGAAAAA TGTCGATCTCTGAAACAAAGAGTTTTGACAGAGGATTCCATGAAATTTTT ATCGTAGATCTGATCTGAAATTCACTCTGAAATTTGGAGGAAATTcaatc atagatttataaagcccgaagagctaaatttcgtgctttaagccatcaca ggcaagaaaaattgaatattggaaaaaatatattgttgctattgttttca aaaacaccgcgaagcttctgattggtcaagcgctgagaTACTATTggaat gtcacgtgacctaggtaggatttcctacctaacctcggcacacttttcag caaaagtacgccatctagcccttcgggctttataaatctatgaatCCAAT GATATTATAGCCTGTACTACCCTCTCCCCATCGCCCACGGGCGGtttttg ctttttgaaaaatctagatccTACGCACATCTATTTTGGCTAGATTATTT CTATGTTTCGCCAGTACCAACTTGCTGGTACTGAATGATCGAAAAACAAC TGAGCAAGTCAGAACATCTCTCGTTGTGGAGTCTTGTGAAAAAAATAGCG CAGACATGGAGTGGTGCCGTATCGTACGCGGTTCTTTCCGGCGAATAGGC AAATGCTCTCAATTCAATCATGTTTTAATACAATAATAGGTAGCTTTCTT CTTTTGCCCTTACAGGAAAGACGTCACGATGCGTTTGAGTGGCACGCCTG ACGGATCGTTTTGTATAAGACAGTCGGAACGATGTAGAGGCGAATGGACA TTAACAGTCAGGTAATGTTAGTTCCTAATAACTGTCTTAGTAATCTCTTG ATAATATCTTAACCTGAGGCTCACATTGTTTCTACTATGTTCTTTATGGT TTGGCCAATTTATCATTATGCATACGATGAACCAACTGTcttttagttga aagtgttcCGAGGGACTTTAGTGCGCTTAGGTTTGAAGAAAGGATTCATG CGTTTTACCTAACCTATTTACTTGACAATCTTTCAGGAAAGAGGGTCGCG AAAGACTCATTCGTATCATACAACGGAACCAGAACGGCGCCCCTTGTTTC GGCTTCCGTGAAGAACTTCTCAATTTCGGTAGCTTAGAGGACTTGGTTTT ACATTTCCGTGATAATTCGCTGGAAGATTACAACTCCAAGTTAAACATCA AGCTACTGCACCCGTGCGGGAAACCTGACCAATTAAATGTAAGTTTAAAT CAAAATGTTCTGGACTAAAAGTTCAACTTTCGTTTTAAGGGTATTTGACA ATACAGTCAACtcactctaattcgaacttctcgaacctctattattcgaa tctttctgtaattcgaacttaaaCATTGGTCCCCTCAGGCTGGAAAATGG TTTGAATTactttttgtaattcgaatctttctctaattcgaaggaaattt ttggtcccatgaagatcgaattagagagagtcaactgtatcaTATTGGAA ATTATCAattactttgattttttatgatgTAAACGATACTCCTAGTCTTT AGCATCTgcaatcggcgccgaaataaTTGGCAAAAAAGGGGAATACACCT TTTTACGGTTAGCTGattcgtataaaaagtcaccaaaatttcgagtaaac aaatCATCTCATTGACTAGCaaaaacttaaacaaaaaaaaatgcttAGAG TAAGAGCACAGAAAGGACGTTTTTGTCATACTCTGCACATTTTTTTGTGC AGCCTCTTAGACCAAATTCATGAATATAGATtacataattttgttttttc tatttcagaTAACAGAAGGTCAACAAGACATGTTAGTGGACCAGGCGAGA TACGAAGAGTTGGTGGAGAAACTCAATCACATCAAATTCATGGAACTGAA GCTCGAAGAACAACAATTGGTTGGTaccccagttggcacacaacgtcgtt tcaacgtttatgtaacgctcacaacgtccattcaacgttagatgaacgtt gaaacaacgttgtgtgtcagctgggtaccagtccttattttgttgttttt ggaaaGGAATTAAGCTCACAGCTGACTTTCTGCCCTACCTATTCtgattg ttagagtaggcaaaaagtgggcactaatttggcagttaaaatctttgctt gaaaaagattgaaagaagacattgcattgacgtcaaaagagggcaatgca ttgactttagacagccaactttcTGCCAACTTCAATTCGCagttagaata ggcagggcgaaaagtgggccgtctaaactagagcttaggaAAACAGAACA CACATACCAAGGCCTGTGTGAGACAGTAGAAGTATTTGTCCGTCCAAAAT TTCAATCTTTCTGAAAAGTTCATAGATGGCAACATTAATATGGGGTTTTT GGGGATTTTTTCGTTAATTCTGTGGCGGCGCGTCTCCTTCTATTTGTGAA TGATTTTGAAGTTCTCATGAAAAAAAGAGTAAATTCTAAAAGATGTCtta tcttattttttactttttttcccaCCATATAGGCATTAGAAGAATGTAAA ACGTTAGTAGAATCGCAGACAGATGTGGTCAACTTCTTGGAGGAACAGAT GGAACTCGCTGAAAGGATCAAGAAAGAAGCTCCCACTAGTGATAAGTCAG AGTATGTCTTTTAGTTGGTGTATATGTGTCACGTGTCTCTATCAAATGGA TTGAGACCACGAAAAAACAAAGGTTTGATTTAGCCGACTGTGTTAGTAAT TGGGGAGTTTTGGTAATTCTATTAGACGAATCTTGTCTTTCTATATctcg aactaattctcagttGCCTGCCAAGAGGAAATACTTGTAAAATACTCTCT ACAATTaaattctctctgtaattcgaacaaaccAAACTTCCCGTTCGAGT TTGAGAGTAAACTGACGAAAAAAACTTGTTGGTCTATTTTTCAACTAATT TTGCGGACGTCCAGGTAGTTTAAATATAAAATAGAACactttctttgtgt ttttttttactggCGAAAAATTTGTAATTAGAACATCTCCATTATATGAT GAGGCTATTTTGTCGTTCTAGTTTTCAACTAAGGCTGATTAATGGTTATT CATTTCTTATAATTGTGGGCAACAATTTCCTCTTCTTTTCTGATACAAGT CATGACCGATTTATTTACAATCTTTAAATTCGACCCCCTacaactcaaat gtctccttaactcaagtTATTGTCTCTTCAGTTGATAATGCCTTGTAAAC TATGACTAAAATTACGTTTTATGGAGATTTATGGAGACTGCATTGTATTA GCCCAAGAAAAGGGTTAATGTATACCGagtttttaaaacgtttttcaaTA TCATAATTTTATAGTTTGGAGAACAGTATTGTGAGCATGAAAGAATTTTT GAACATGGAGAAAGCGAAATGGCACGAGATGGATGATATGTTGACCAAAC TGAAGCAAGAATGCGACCAGATCAGTACACAATTGACGGAGTTGAGTGCA GGAGTACCTGGACTGACAGACGAGTATAACCAATTGGAAAGGTATTACAG TGTataaacccagctggcacacaacgttttttcaacgtttatttaacgtt cacacaacgtccaaataacgttatttgaacgttaaaacaacgttgtgtgc cagctggaaaAAGTTCTTCCGTTTCAGAGGGATTTCCAACACAGTAAAGT ATATAAAGGGACTATTTCGtctcaaaatttggtataattcaccaaaattt aaaaaaatgataatgCTACTTTGCTGTATAAAATCCCTTTTCCGTCTCAA ACAAAAatccttgctttgaccactgtattaattttgctttgaaagatTTC CCCATCACCTTGTCAAGGCCTTGTCAATTTTGTGGTCATGTTAATCGTGG TGAACTTTTATAGAtcgatagagtcgatattttaatATTGATAGCCACGG AAAGAACTTCTTATTAGGTCCACGGGGAaacggctcggctatctatgaac tgaacagaacattgggctcttccagaaaatgttcgtacatgggggggaTG GAgaatatattgtccgggggtagcgaaaaatcatcaaaatttgccttgtt cgGGGGTagatttgctctgtccggggtaATTTGGGTTTCCGGGGGGTAAG CTGATGCTTGTCCGGTGGGTAAAACCtgttgtccggggggccaaaagtca ctttgtccgggggtaaatcgCTGAAAATCTTTATATCCtacacccccccc ccatattccaATTTTTACTGGAAAAGCCCATAGGAAGGAGACGATTACAA CGAATTCAGTCATCTTAACGATATTCCTTCTTTGTAAACTGGAACCCAGT CTCCCCTCTTAAAGGTGAGAAAGGTGTATTAAATTATTTGGAGCATACTC GATTTCATTCGGACCACTCTTTTTCATTATATGgttgattgttttgtttt agaTTATTACAGAAGAACGATCCGAACCTGTTCGCAGAGAAACATGGGGA AGACGGACTCGAAGAAAAAGACATGCAAAAATTCGAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_016018XLOC_016018Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00028278-exon-sc0000672-1491911889:116369..116467TCONS_00028278-exon-sc0000672-1491911889:116369..116467Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:116369..116467TCONS_00028278-exon-sc0000672-1510915933:116369..116467Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:116369..116467TCONS_00028278-exon-sc0000672-1575043694:116369..116467Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:123029..123123TCONS_00028278-exon-sc0000672-1491911889:123029..123123Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:123029..123123TCONS_00028278-exon-sc0000672-1510915933:123029..123123Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:123029..123123TCONS_00028278-exon-sc0000672-1575043694:123029..123123Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:123464..123503TCONS_00028278-exon-sc0000672-1491911889:123464..123503Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:123464..123503TCONS_00028278-exon-sc0000672-1510915933:123464..123503Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:123464..123503TCONS_00028278-exon-sc0000672-1575043694:123464..123503Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:124234..124329TCONS_00028278-exon-sc0000672-1491911889:124234..124329Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:124234..124329TCONS_00028278-exon-sc0000672-1510915933:124234..124329Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:124234..124329TCONS_00028278-exon-sc0000672-1575043694:124234..124329Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:124555..124756TCONS_00028278-exon-sc0000672-1491911889:124555..124756Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:124555..124756TCONS_00028278-exon-sc0000672-1510915933:124555..124756Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:124555..124756TCONS_00028278-exon-sc0000672-1575043694:124555..124756Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:125327..125437TCONS_00028278-exon-sc0000672-1491911889:125327..125437Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:125327..125437TCONS_00028278-exon-sc0000672-1510915933:125327..125437Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:125327..125437TCONS_00028278-exon-sc0000672-1575043694:125327..125437Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:126051..126169TCONS_00028278-exon-sc0000672-1491911889:126051..126169Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:126051..126169TCONS_00028278-exon-sc0000672-1510915933:126051..126169Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:126051..126169TCONS_00028278-exon-sc0000672-1575043694:126051..126169Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:126883..127059TCONS_00028278-exon-sc0000672-1491911889:126883..127059Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:126883..127059TCONS_00028278-exon-sc0000672-1510915933:126883..127059Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:126883..127059TCONS_00028278-exon-sc0000672-1575043694:126883..127059Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1491911889:127971..128058TCONS_00028278-exon-sc0000672-1491911889:127971..128058Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1510915933:127971..128058TCONS_00028278-exon-sc0000672-1510915933:127971..128058Clytia hemisphaericaexon
TCONS_00028278-exon-sc0000672-1575043694:127971..128058TCONS_00028278-exon-sc0000672-1575043694:127971..128058Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000672supercontigsc0000672:116369..128058 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.060003 0.928513 1.63867 1.91269 5.66575 2.89537 0.000945283 0.438789 17.7169 23.2222 10.7965 14.6696 23.5802 21.8276 11.0822 18.2059 20.3221 18.301 20.236 23.5477 12.144 11.31 3.38056 5.73211 8.04274 0.718734 7.77968 10.3802 7.5174 5.50249
Blast
BLAST of TCONS_00028278 vs. Swiss-Prot (Human)
Match: P85B (Phosphatidylinositol 3-kinase regulatory subunit beta OS=Homo sapiens GN=PIK3R2 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 4.587e-20
Identity = 58/193 (30.05%), Postives = 104/193 (53.89%), Query Frame = 2
Query:  197 FDESKWLWPEATRKDVTMRLSGTPDGSFCIR-QSERCRGEWTLTVRKEGRERLIRIIQRNQNGAPCFGFREELLNFGSLEDLVLHFRDNSLEDYNSKLNIKLLHPCGKPDQLNITEGQQDMLVDQARYEELVEKLN--HIKF---------MXXXXXXXXXXXXXCKTLVESQTDVVNFLEEQMELAERIKKE 739
              +++W W + +R++V  +L  TPDG+F +R  S + +GE+TLT+RK G  +LI++  R+ +    +GF E L  F S+ DL+ H+R  SL  YN+KL+ +LL+P        +++ QQD +V +   E +  +L   H ++         +  +       L+  +T +E+  + +   EEQ +  E+  KE
Sbjct:  325 LQDAEWYWGDISREEVNEKLRDTPDGTFLVRDASSKIQGEYTLTLRKGGNNKLIKVFHRDGH----YGFSEPL-TFCSVVDLINHYRHESLAQYNAKLDTRLLYP--------VSKYQQDQIVKEDSVEAVGAQLKVYHQQYQDKSREYDQLYEEYTRTSQELQMKRTAIEAFNETIKIFEEQGQTQEKCSKE 504          
The following BLAST results are available for this feature:
BLAST of TCONS_00028278 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
P85B4.587e-2030.05Phosphatidylinositol 3-kinase regulatory subunit b... [more]
back to top