XLOC_016018 (gene) - C. hemisphaerica

Overview


Name	XLOC_016018
Unique Name	XLOC_016018
Type	gene
Organism	Clytia hemisphaerica (Jellyfish)

Sequence

The following sequences are available for this feature:

gene from alignment at sc0000672:116098..128058+

gene from alignment at sc0000672:116098..128058+

Legend: gene

Hold the cursor over a type above to highlight its positions in the sequence below.

>XLOC_016018 ID=XLOC_016018|Name=XLOC_016018|organism=Clytia hemisphaerica|type=gene|length=11961bp|location=Sequence derived from alignment at sc0000672:116098..128058+ (Clytia hemisphaerica)
ctaaaataatttaataaacgcccccttcttttaaacgccccctcgaataa
acgcccctcctaaaatcgaaaaaaattaataaacgccccgggcgtttatt
cgaagtaatgcggtatctgttctgtttttataGTGTGGCACAATACAGCA
ATGAAAACGGAATGACAATAGAGGAACTCGCCAAAGTGTTCAGCTATCTC
GTTCTCAGACCTCGCGAGAAAGATGGAAAGTTAGTCTCCATTATTGATTG
TAACTGNCTGTTCTGTTTTTATAGTGTGGCACAATACAGCAATGAAAACG
GAATGACAATAGAGGAACTCGCCAAAGTGTTCAGCTATCTCGTTCTCAGA
CCTCGCGAGAAAGATGGAAAGTAAGTCTCCATTATTGATTGTAACTGGCC
ACCGATTAGCCCCTGTGGATAGAATTTTGATTAATGCTGCTTTATAATCT
CATAAACTAAAACAAGACTCTAACGTTCAGTCTACAAAAATGTTTTCGGA
AGTCTATTTCAAAGAATGGGTCTTTCTTTAATTTGAAGAATGTAGTATAA
TTATCATTTATTGCTCACATCATACTTTGTCTGTATATTTTCTGTTGGCA
TTTTGACGCCATTTTCAGCAATTCCAATATTTTCCATAGTTTGGTTAATA
TTTTTAGTCGGTTGCCTTCTAAGTCTGTCTCAATGATTTATCGtagctcg
aagggctagatctgcggcctttatcgaaaagtgaagcaagttttggtagg
atttcataccaaagaaatcacgtgacaacaagcaatttcactggtttgag
agatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNTCtgcggcctttatcgaaaagtgaag
caagttttggtaggatttcataccaaagaaatcacgtgacaacaagcaat
ttcactggtttgagagatgcaaaacagcgtttgccgcctattttttttat
ctcgctctccgaaaacaattaaaatgctagatcctatccatcggcgcgaa
attttaaaaaagtcaaatttttgcttcacttttttttgctggagaaagct
taaaaagttgcctatctagcccgtCGGGCTTTAAAGATCTGTGGTCTGAg
acttcctaagaaattggtgggtttagagtccgcgaagcctaaaaatattc
ttaacttgctcttataatttgttctttatattttggccatcgcAGGCTTA
TGCTCTTATATCGTTTTTTCTTATATGAAAAAAGTATTATAATTCAGATT
TAGTGTATTTCATTTGATCCGTGTTCATTTAGTTTCAAAACCATTTATAA
GTAAAGTAATAATTTTTTGACCTACTTATTAATGGGTTGATAATACTTTT
AATGGAGTTTTGATTAATTACTCACGGTTTCTGCTAGAAGCATTTTATCA
TTAAGATATGTAATACCTTTTTAATGGAGTTTTAATTGCTTTCGCTTTCT
AATAGAAGTATGGTATAGATACCATTAGCATAAAACTTTAATCTACTTAT
GAATTCTGTAATCGATTAAAGAGTATGTTTGAAATCATACAAActctggt
tgttttttcatcggttgactcaaaaaaactttgatttgaACATATTTACT
AAGCGATCCTCAAGGCCAAACAGTTGAGTCCAATGTTATTTATCTTCCAT
TGGGTCTTATTAGAAAGTAGTCAGACTCTAACTTAAAACTTTGAGGTTTA
Tttgttaatttcgcttagcgaaagtattacgatagccttccgtgtgtctg
gctggcgagacattttttagggcgcaaattatggcgtgggcgtttggctg
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NNNNNNNNNtataaaggagtcaaagtttaatctcaaggagtattatttct
ttaaagcttaaagttggctagtttttaccctgcaattttctagtccagaa
gctggagctaGAGCTCAACTtcactcatttttttataagcataacgttta
taagcatactgaagctcaaatttccagaaaaattaagcatatgctaagca
taccttgaggctcacccaaagaaatttttagaatcataatttcccaaact
tcagaaaataacacaagaatgaagaagagagttacaaacaaaattcgaaa
aattggtgattttattttgtttaatctcttataaataacacaacttGGTC
TCTTGAGAATGTACACTATCTAAACTTACANNNNNNNNNNNNNNNNNNNN
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attatgcgaaattttcgactttaagtcgtcttgttttagTTTGAATAAGT
AGATGCAAAGTTGCAATGTTGCAAACTGTTGAGATGTTATAACTTATTAT
TAAAAACTTTTACAGAGAGGTTATTCAATGAATTAGCTTTTAGTTCAACC
TGGTTCAACCAAGATTATGTTTGGCTTTAATGAGGAGAGTCAAATGTCCG
AAGTTTCTTTCTTAGTCATCTGTTACTTAAATTAATGAATATGGAAAAGG
ACTAGTCCCggaaatataatattttatacGCATgttgttctgtttttttt
ttctcatatgAGTGCTTTTTATTTCATGAGACATTTTTTTTCGTCTCTTT
TTTAACGCGATCTTGCAGCAAAATACAATCTGTGACTAAAATTGTGGACT
TTCCTTGGAAAATCCCTCCCCCTCCTAACATCAATGTTGATGAGAGGATT
TTGTGGGTCCGGTGGCAGCCCTCAACCCGTCAACATTGATATTAGGGGTA
AGGGAATTTTTGCCCCTAAATTTTGACGGGTTGAGGGCTGCCACCGGAAG
TGAATTTTTGCCACGATTGAGAGTCAGAGATGGTAGACTATATTCCTTAG
ACCTTAGTATCATTTTTTAGATTTACCCAAAGTTACacgtaaaaaaactt
ttattaataACTCTTTATTTCTTGTTTATAGAATTTTCACCGAGAATCTT
GATATCCAGATACTTGCTTTCATCAGGATGGTGAGAGCGTGCGAATCTCA
CTTCGGTGCCACCTCGCTGGCTGAAggtttgtaaaagattttagttTTTC
ATTATACGGTCAAAGAGAGCCTAACAGAATTTTTaagcaaatatttttta
ttgctaACAACCGAAAAATCCACTTTATTTAATATTCATTTATAACTATA
TTCGTTCTTCGCTCAGCCGTCAGAAAGGATAGATGTTTATTTGGTCTTTG
TTCTGTTCTAGTTTTAAACTGAAACTGGGTCTATGACACTGGGGGATCTA
GGGTACCGCATTTCTGCTTACACTCTAATCTCAGGCAAAGGTGGAGTATA
GTTCAAATTGATCAGAAAAAGCATTAGTCACTTATCAATATTTTTACGGT
ATTTATTTCTCGGTAGATTTCGACGAATCGAAATGGCTATGGCCCGAAGC
AACACGGTACGTATCTTTTGAAATTTGTGTGGAATTTTCAACCTTGTGCT
CCTACTTCGAAATGAGAAAAATGTCGATCTCTGAAACAAAGAGTTTTGAC
AGAGGATTCCATGAAATTTTTATCGTAGATCTGATCTGAAATTCACTCTG
AAATTTGGAGGAAATTcaatcatagatttataaagcccgaagagctaaat
ttcgtgctttaagccatcacaggcaagaaaaattgaatattggaaaaaat
atattgttgctattgttttcaaaaacaccgcgaagcttctgattggtcaa
gcgctgagaTACTATTggaatgtcacgtgacctaggtaggatttcctacc
taacctcggcacacttttcagcaaaagtacgccatctagcccttcgggct
ttataaatctatgaatCCAATGATATTATAGCCTGTACTACCCTCTCCCC
ATCGCCCACGGGCGGtttttgctttttgaaaaatctagatccTACGCACA
TCTATTTTGGCTAGATTATTTCTATGTTTCGCCAGTACCAACTTGCTGGT
ACTGAATGATCGAAAAACAACTGAGCAAGTCAGAACATCTCTCGTTGTGG
AGTCTTGTGAAAAAAATAGCGCAGACATGGAGTGGTGCCGTATCGTACGC
GGTTCTTTCCGGCGAATAGGCAAATGCTCTCAATTCAATCATGTTTTAAT
ACAATAATAGGTAGCTTTCTTCTTTTGCCCTTACAGGAAAGACGTCACGA
TGCGTTTGAGTGGCACGCCTGACGGATCGTTTTGTATAAGACAGTCGGAA
CGATGTAGAGGCGAATGGACATTAACAGTCAGGTAATGTTAGTTCCTAAT
AACTGTCTTAGTAATCTCTTGATAATATCTTAACCTGAGGCTCACATTGT
TTCTACTATGTTCTTTATGGTTTGGCCAATTTATCATTATGCATACGATG
AACCAACTGTcttttagttgaaagtgttcCGAGGGACTTTAGTGCGCTTA
GGTTTGAAGAAAGGATTCATGCGTTTTACCTAACCTATTTACTTGACAAT
CTTTCAGGAAAGAGGGTCGCGAAAGACTCATTCGTATCATACAACGGAAC
CAGAACGGCGCCCCTTGTTTCGGCTTCCGTGAAGAACTTCTCAATTTCGG
TAGCTTAGAGGACTTGGTTTTACATTTCCGTGATAATTCGCTGGAAGATT
ACAACTCCAAGTTAAACATCAAGCTACTGCACCCGTGCGGGAAACCTGAC
CAATTAAATGTAAGTTTAAATCAAAATGTTCTGGACTAAAAGTTCAACTT
TCGTTTTAAGGGTATTTGACAATACAGTCAACtcactctaattcgaactt
ctcgaacctctattattcgaatctttctgtaattcgaacttaaaCATTGG
TCCCCTCAGGCTGGAAAATGGTTTGAATTactttttgtaattcgaatctt
tctctaattcgaaggaaatttttggtcccatgaagatcgaattagagaga
gtcaactgtatcaTATTGGAAATTATCAattactttgattttttatgatg
TAAACGATACTCCTAGTCTTTAGCATCTgcaatcggcgccgaaataaTTG
GCAAAAAAGGGGAATACACCTTTTTACGGTTAGCTGattcgtataaaaag
tcaccaaaatttcgagtaaacaaatCATCTCATTGACTAGCaaaaactta
aacaaaaaaaaatgcttAGAGTAAGAGCACAGAAAGGACGTTTTTGTCAT
ACTCTGCACATTTTTTTGTGCAGCCTCTTAGACCAAATTCATGAATATAG
ATtacataattttgttttttctatttcagaTAACAGAAGGTCAACAAGAC
ATGTTAGTGGACCAGGCGAGATACGAAGAGTTGGTGGAGAAACTCAATCA
CATCAAATTCATGGAACTGAAGCTCGAAGAACAACAATTGGTTGGTaccc
cagttggcacacaacgtcgtttcaacgtttatgtaacgctcacaacgtcc
attcaacgttagatgaacgttgaaacaacgttgtgtgtcagctgggtacc
agtccttattttgttgtttttggaaaGGAATTAAGCTCACAGCTGACTTT
CTGCCCTACCTATTCtgattgttagagtaggcaaaaagtgggcactaatt
tggcagttaaaatctttgcttgaaaaagattgaaagaagacattgcattg
acgtcaaaagagggcaatgcattgactttagacagccaactttcTGCCAA
CTTCAATTCGCagttagaataggcagggcgaaaagtgggccgtctaaact
agagcttaggaAAACAGAACACACATACCAAGGCCTGTGTGAGACAGTAG
AAGTATTTGTCCGTCCAAAATTTCAATCTTTCTGAAAAGTTCATAGATGG
CAACATTAATATGGGGTTTTTGGGGATTTTTTCGTTAATTCTGTGGCGGC
GCGTCTCCTTCTATTTGTGAATGATTTTGAAGTTCTCATGAAAAAAAGAG
TAAATTCTAAAAGATGTCttatcttattttttactttttttcccaCCATA
TAGGCATTAGAAGAATGTAAAACGTTAGTAGAATCGCAGACAGATGTGGT
CAACTTCTTGGAGGAACAGATGGAACTCGCTGAAAGGATCAAGAAAGAAG
CTCCCACTAGTGATAAGTCAGAGTATGTCTTTTAGTTGGTGTATATGTGT
CACGTGTCTCTATCAAATGGATTGAGACCACGAAAAAACAAAGGTTTGAT
TTAGCCGACTGTGTTAGTAATTGGGGAGTTTTGGTAATTCTATTAGACGA
ATCTTGTCTTTCTATATctcgaactaattctcagttGCCTGCCAAGAGGA
AATACTTGTAAAATACTCTCTACAATTaaattctctctgtaattcgaaca
aaccAAACTTCCCGTTCGAGTTTGAGAGTAAACTGACGAAAAAAACTTGT
TGGTCTATTTTTCAACTAATTTTGCGGACGTCCAGGTAGTTTAAATATAA
AATAGAACactttctttgtgtttttttttactggCGAAAAATTTGTAATT
AGAACATCTCCATTATATGATGAGGCTATTTTGTCGTTCTAGTTTTCAAC
TAAGGCTGATTAATGGTTATTCATTTCTTATAATTGTGGGCAACAATTTC
CTCTTCTTTTCTGATACAAGTCATGACCGATTTATTTACAATCTTTAAAT
TCGACCCCCTacaactcaaatgtctccttaactcaagtTATTGTCTCTTC
AGTTGATAATGCCTTGTAAACTATGACTAAAATTACGTTTTATGGAGATT
TATGGAGACTGCATTGTATTAGCCCAAGAAAAGGGTTAATGTATACCGag
tttttaaaacgtttttcaaTATCATAATTTTATAGTTTGGAGAACAGTAT
TGTGAGCATGAAAGAATTTTTGAACATGGAGAAAGCGAAATGGCACGAGA
TGGATGATATGTTGACCAAACTGAAGCAAGAATGCGACCAGATCAGTACA
CAATTGACGGAGTTGAGTGCAGGAGTACCTGGACTGACAGACGAGTATAA
CCAATTGGAAAGGTATTACAGTGTataaacccagctggcacacaacgttt
tttcaacgtttatttaacgttcacacaacgtccaaataacgttatttgaa
cgttaaaacaacgttgtgtgccagctggaaaAAGTTCTTCCGTTTCAGAG
GGATTTCCAACACAGTAAAGTATATAAAGGGACTATTTCGtctcaaaatt
tggtataattcaccaaaatttaaaaaaatgataatgCTACTTTGCTGTAT
AAAATCCCTTTTCCGTCTCAAACAAAAatccttgctttgaccactgtatt
aattttgctttgaaagatTTCCCCATCACCTTGTCAAGGCCTTGTCAATT
TTGTGGTCATGTTAATCGTGGTGAACTTTTATAGAtcgatagagtcgata
ttttaatATTGATAGCCACGGAAAGAACTTCTTATTAGGTCCACGGGGAa
acggctcggctatctatgaactgaacagaacattgggctcttccagaaaa
tgttcgtacatgggggggaTGGAgaatatattgtccgggggtagcgaaaa
atcatcaaaatttgccttgttcgGGGGTagatttgctctgtccggggtaA
TTTGGGTTTCCGGGGGGTAAGCTGATGCTTGTCCGGTGGGTAAAACCtgt
tgtccggggggccaaaagtcactttgtccgggggtaaatcgCTGAAAATC
TTTATATCCtacaccccccccccatattccaATTTTTACTGGAAAAGCCC
ATAGGAAGGAGACGATTACAACGAATTCAGTCATCTTAACGATATTCCTT
CTTTGTAAACTGGAACCCAGTCTCCCCTCTTAAAGGTGAGAAAGGTGTAT
TAAATTATTTGGAGCATACTCGATTTCATTCGGACCACTCTTTTTCATTA
TATGgttgattgttttgttttagaTTATTACAGAAGAACGATCCGAACCT
GTTCGCAGAGAAACATGGGGAAGACGGACTCGAAGAAAAAGACATGCAAA
AATTCGAAGTG

Gene-mRNA-Prot

The following transcript feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
TCONS_00028277	TCONS_00028277	Clytia hemisphaerica	transcript
TCONS_00028278	TCONS_00028278	Clytia hemisphaerica	transcript
TCONS_00028279	TCONS_00028279	Clytia hemisphaerica	transcript

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
TCONS_00028277-protein	TCONS_00028277-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000672	supercontig	sc0000672:116098..128058 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.52	2.79	4.42	5.04	56.88	45.71	50.47	54.81	31.29	43.37	25.05	25.74	45.96	37.25	23.47	31.61	34.41	32.77	43.85	58.2	22.43	23.19	12.53	16.32	35.39	33.28	18.26	18.91	18.82	16.87

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XLOC_016018 (gene) - C. hemisphaerica