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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028193 ID=TCONS_00028193|Name=TCONS_00028193|organism=Clytia hemisphaerica|type=transcript|length=2058bp
GGGGACTTAGATTTATTTGTATGCaattcagtggggataggaaaaatagc
ataatatttagTAAGGATAGCTTTCATCATGAATATAACCATAACTTTCC
ATAAGGGACggtattttggccattttgttCAAGCAaaaagggttcccagt
gggtctgtgagaagggggtttcAAGATGTAACAAAAACCCAGCATAATAC
AAAAATACTATATTAAAGTATAATTAAGATTCAAATTTACCCTACAAATT
ACATGAAAATTACTTTCACTCTCATATAAAACATTTCAGTTATACAAAAT
AATTCTCCTCCTACAAATCTTATGAATACATTACCCGGGGTCCactttgt
ctgtacacagacccagtatctacggctaatttaaaaatctattgcCGTAG
AGGGACtattgtcattgtcttttctcatttgagatttttcaaaccgaccg
ctgcgatggagtgctggtgaaagaggggagacgatgagagaagttatgct
atttataaatcatacttcatcgcagaggtctccatacgggaattttttat
caaacagacaatgcgcacagagtgtgaGACCTGAAGCTtattgatagact
ggatggcgcgattaagtgacCCAGTAGCATATGTTAAAAAAGCTTAGGCG
GACTGCAAAACAGTTCAGTTAGAAGTTAGAAGTAGACTCTAATCTAATAA
GTCcccgaaaataaaaaaatatgacaattgaaaaattattttacctCGAC
AAGTACCACGCACACAATATTATCATATCCACatacaaaaaaatcattat
cactttcaaaaaaccAATTGCCGTGGTGGTcgtttttctttaaagttaaG
GATTTGAGATTATCAGTCGGGTGCAGAACTTTAGCTTTCTCTATATCATG
CCAATTCGCGATGAAGTCACGCATATGTATATGAAGACCAGTTCCATTAG
GCCATACTTTCCGAGATGTATCGGTGAAAATATAGGTTTTGCCTGTTGAA
CAAGGTACTTCTAAACTTCTTAATGCTTTGTACATATTTGCATGATGCGG
ATAAGGAATTTGTTTGACTAGCACTTGAGCGGCAAATTTTACCAAATCGA
TTTTAcccatattttcaaaattaggTGCTACTGTATATAGGTTCACCATT
TCTTTCAGCTTCTCTTCCGTTTCATGAAACTTGTTTGTCATTATTTCCAG
TTCATCCTTCATCACTTTGTTCTCAACTGTCAATTTTTGAGGTGAACCGC
CCTCTTTTATTTTGTCAGCTTTCAAAAGTTCATATTTTGTTTCCATTTCA
CGCTTTTCTTCTCGGCACTTCAAAATATCCTTTGAAAGTTTTTCCATCTC
GAGGTTAATTTCATTTCCACTGCTTCGCtttaattcttcattttttgctt
ttaaagCTTTCACATCTTGCTCCAATGTCATTTTCTCCGCAATCAAGACA
TCCTTTTCAATACCAAATTGTTTCTCAGCTTTCAGTAGAGCATTCTCTGa
tcttaattttaaaatttcgttttcaTTACGTAACTggttaatttcatttt
caagcttTAATTTAAGATCcttaatttcattttcctttttcaaattGTAA
TTTTCAAGTCTCAATTTTCCCATGTCGTTTTGCATTTTCAAATGTTTGAT
TTCTTCTTTAAGCAGGTTAGCTTCATTACCGTTGGAGTTCGTATCCTTAT
GTAAATCTCCACGAGCTCCGGCAGCATTTTGTGGATCAAGTATCCTTTCG
CTGTGGGCATTGTTCATTCTCCAATCATCAACGTCAATCTTTTTTTGTGA
TGCCATCGTTACATTTACTTGAAATCCAACAAAAACAGAATTTTATCTAT
ATGAAATGACATGACAAAATAGTTATGGTACAAATAATAAAACCATGGAC
ACATCTAACCAACAGACAAAGCAGATAACATGAAAGTAGGtcaaatacag
gaacgaaaggAATCTAGTTACAAAGGAATCTAGTTACATTTACATTCAGG
TTTCAAACTGCTAAATTTACCAATAAAGAAAAACTCACATCACTATCTGT
AATAGTAA Run BLAST on NCBI transcript from alignment at sc0000670:96424..98481+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028193 ID=TCONS_00028193|Name=TCONS_00028193|organism=Clytia hemisphaerica|type=transcript|length=2058bp|location=Sequence derived from alignment at sc0000670:96424..98481+ (Clytia hemisphaerica)
GGGGACTTAGATTTATTTGTATGCaattcagtggggataggaaaaatagc
ataatatttagTAAGGATAGCTTTCATCATGAATATAACCATAACTTTCC
ATAAGGGACggtattttggccattttgttCAAGCAaaaagggttcccagt
gggtctgtgagaagggggtttcAAGATGTAACAAAAACCCAGCATAATAC
AAAAATACTATATTAAAGTATAATTAAGATTCAAATTTACCCTACAAATT
ACATGAAAATTACTTTCACTCTCATATAAAACATTTCAGTTATACAAAAT
AATTCTCCTCCTACAAATCTTATGAATACATTACCCGGGGTCCactttgt
ctgtacacagacccagtatctacggctaatttaaaaatctattgcCGTAG
AGGGACtattgtcattgtcttttctcatttgagatttttcaaaccgaccg
ctgcgatggagtgctggtgaaagaggggagacgatgagagaagttatgct
atttataaatcatacttcatcgcagaggtctccatacgggaattttttat
caaacagacaatgcgcacagagtgtgaGACCTGAAGCTtattgatagact
ggatggcgcgattaagtgacCCAGTAGCATATGTTAAAAAAGCTTAGGCG
GACTGCAAAACAGTTCAGTTAGAAGTTAGAAGTAGACTCTAATCTAATAA
GTCcccgaaaataaaaaaatatgacaattgaaaaattattttacctCGAC
AAGTACCACGCACACAATATTATCATATCCACatacaaaaaaatcattat
cactttcaaaaaaccAATTGCCGTGGTGGTcgtttttctttaaagttaaG
GATTTGAGATTATCAGTCGGGTGCAGAACTTTAGCTTTCTCTATATCATG
CCAATTCGCGATGAAGTCACGCATATGTATATGAAGACCAGTTCCATTAG
GCCATACTTTCCGAGATGTATCGGTGAAAATATAGGTTTTGCCTGTTGAA
CAAGGTACTTCTAAACTTCTTAATGCTTTGTACATATTTGCATGATGCGG
ATAAGGAATTTGTTTGACTAGCACTTGAGCGGCAAATTTTACCAAATCGA
TTTTAcccatattttcaaaattaggTGCTACTGTATATAGGTTCACCATT
TCTTTCAGCTTCTCTTCCGTTTCATGAAACTTGTTTGTCATTATTTCCAG
TTCATCCTTCATCACTTTGTTCTCAACTGTCAATTTTTGAGGTGAACCGC
CCTCTTTTATTTTGTCAGCTTTCAAAAGTTCATATTTTGTTTCCATTTCA
CGCTTTTCTTCTCGGCACTTCAAAATATCCTTTGAAAGTTTTTCCATCTC
GAGGTTAATTTCATTTCCACTGCTTCGCtttaattcttcattttttgctt
ttaaagCTTTCACATCTTGCTCCAATGTCATTTTCTCCGCAATCAAGACA
TCCTTTTCAATACCAAATTGTTTCTCAGCTTTCAGTAGAGCATTCTCTGa
tcttaattttaaaatttcgttttcaTTACGTAACTggttaatttcatttt
caagcttTAATTTAAGATCcttaatttcattttcctttttcaaattGTAA
TTTTCAAGTCTCAATTTTCCCATGTCGTTTTGCATTTTCAAATGTTTGAT
TTCTTCTTTAAGCAGGTTAGCTTCATTACCGTTGGAGTTCGTATCCTTAT
GTAAATCTCCACGAGCTCCGGCAGCATTTTGTGGATCAAGTATCCTTTCG
CTGTGGGCATTGTTCATTCTCCAATCATCAACGTCAATCTTTTTTTGTGA
TGCCATCGTTACATTTACTTGAAATCCAACAAAAACAGAATTTTATCTAT
ATGAAATGACATGACAAAATAGTTATGGTACAAATAATAAAACCATGGAC
ACATCTAACCAACAGACAAAGCAGATAACATGAAAGTAGGtcaaatacag
gaacgaaaggAATCTAGTTACAAAGGAATCTAGTTACATTTACATTCAGG
TTTCAAACTGCTAAATTTACCAATAAAGAAAAACTCACATCACTATCTGT
AATAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028193-exon-sc0000670-1491911889:96424..98481 | TCONS_00028193-exon-sc0000670-1491911889:96424..98481 | Clytia hemisphaerica | exon |
| TCONS_00028193-exon-sc0000670-1510915933:96424..98481 | TCONS_00028193-exon-sc0000670-1510915933:96424..98481 | Clytia hemisphaerica | exon |
| TCONS_00028193-exon-sc0000670-1575043694:96424..98481 | TCONS_00028193-exon-sc0000670-1575043694:96424..98481 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000670 | supercontig | sc0000670:96424..98481 + |
Blast
The following BLAST results are available for this feature:
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