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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00028131 ID=TCONS_00028131|Name=TCONS_00028131|organism=Clytia hemisphaerica|type=transcript|length=445bp
GAACTCACCTTACTGTGTGAAAAGGTCGCTTGATCTTGacatcaacaaaa
acaacatatAAATTATGAATTTGGATATGTCACGCAAAGTTCATCGCGAA
TCAAATGAGCAGGCAAGCGAAATACATCAGATATGAGGCACATGTACTTA
AATTCTAGTTGCACTGGTTTTTGCCAATGAACATACAAACTGCGATATTA
ACTAAATGGATTGGAAAGAAACATCACACTAAGTTAATCAAAGATACTTA
TTATACGAACTTATGTCTGGAACTCATCCACTGAGTGAGATTGGACTTTC
TGTTATGTTGTTTTGGcgactatgatttttttttcaaagtatgTAGTTCT
TTCATCAAATTAAGTTCAAAAAATGGATCAGAGtatctttgttttttctt
acaaactagcacgtttttttataagaacactcaAAAAATTTGAAG Run BLAST on NCBI transcript from alignment at sc0000665:16699..17778+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00028131 ID=TCONS_00028131|Name=TCONS_00028131|organism=Clytia hemisphaerica|type=transcript|length=1080bp|location=Sequence derived from alignment at sc0000665:16699..17778+ (Clytia hemisphaerica)
GAACTCACCTTACTGTGTGAAAAGGTAAGGCAATACTTACATGATTTCAC
TTTTTATCCGTGATATTCGAGACGTAAGGTTTTATAGGGAAGCACACATC
GGATGTTTACAACTACTTTTGAACTCGAAAAGTAAAACTAGTTGCAAACG
TCTGGGATAGTTTTgagtgtttccgtataaaacattacgtcatgaatata
atAACTGTTGAGTAACGAGACTTAATGAAACTGACGTTATAAATGGAACT
CTCTCGACTAAaccaaaaatgaaataattcaTCAAAAGCATATTTTCTGC
GTGTCAAAAGTTTAATCCCAATTTAACGAGCATTCATACTAATCGTTGTC
TAGCGAGGGATTTTCATTTTAGTTGTGAAAAGAAGGTGAAATAATTGTCA
ACAAAATCCATATCTTTACTCTGAAAATTTTATCGGTACACCTGGTTGGT
ACACTgagattcatgatatgcaccgttGCACTGTCTTCCACGGACTCAAC
AACTAATTGGtcgcaagtgacgtattggtcGATTTTACGtcacaaccaat
cagctgtcgagtctgtgatgtaatgtcaaAAGACATTACAACGGCGCATA
TCATCAAATGTAATTGTTAACAAATCTTGATCATGATGAAGTATTTCTCT
CATTTTCAGGTCGCTTGATCTTGacatcaacaaaaacaacatatAAATTA
TGAATTTGGATATGTCACGCAAAGTTCATCGCGAATCAAATGAGCAGGCA
AGCGAAATACATCAGATATGAGGCACATGTACTTAAATTCTAGTTGCACT
GGTTTTTGCCAATGAACATACAAACTGCGATATTAACTAAATGGATTGGA
AAGAAACATCACACTAAGTTAATCAAAGATACTTATTATACGAACTTATG
TCTGGAACTCATCCACTGAGTGAGATTGGACTTTCTGTTATGTTGTTTTG
GcgactatgatttttttttcaaagtatgTAGTTCTTTCATCAAATTAAGT
TCAAAAAATGGATCAGAGtatctttgttttttcttacaaactagcacgtt
tttttataagaacactcaAAAAATTTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00028131-exon-sc0000665-1491911889:16699..16722 | TCONS_00028131-exon-sc0000665-1491911889:16699..16722 | Clytia hemisphaerica | exon |
| TCONS_00028131-exon-sc0000665-1510915933:16699..16722 | TCONS_00028131-exon-sc0000665-1510915933:16699..16722 | Clytia hemisphaerica | exon |
| TCONS_00028131-exon-sc0000665-1575043694:16699..16722 | TCONS_00028131-exon-sc0000665-1575043694:16699..16722 | Clytia hemisphaerica | exon |
| TCONS_00028131-exon-sc0000665-1491911889:17358..17778 | TCONS_00028131-exon-sc0000665-1491911889:17358..17778 | Clytia hemisphaerica | exon |
| TCONS_00028131-exon-sc0000665-1510915933:17358..17778 | TCONS_00028131-exon-sc0000665-1510915933:17358..17778 | Clytia hemisphaerica | exon |
| TCONS_00028131-exon-sc0000665-1575043694:17358..17778 | TCONS_00028131-exon-sc0000665-1575043694:17358..17778 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000665 | supercontig | sc0000665:16699..17778 + |
Blast
The following BLAST results are available for this feature:
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