TCONS_00027820 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027820
Unique NameTCONS_00027820
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length132

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027820 ID=TCONS_00027820|Name=TCONS_00027820|organism=Clytia hemisphaerica|type=transcript|length=132bp
CTTTCATACCATTGATTTTTGGTGCTACTGGCGGAACTTCCCGCGAATGT
TCGATATTTTTAAATAGACTTTCTGAGAAAATCTCAGAGAAGCAAAATTG
CACGAAGAGTGTCGTGATCGCCGGGATTCGAC
Run BLAST on NCBI

transcript from alignment at sc0000646:32541..32672

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027820 ID=TCONS_00027820|Name=TCONS_00027820|organism=Clytia hemisphaerica|type=transcript|length=132bp|location=Sequence derived from alignment at sc0000646:32541..32672 (Clytia hemisphaerica)
GTCGAATCCCGGCGATCACGACACTCTTCGTGCAATTTTGCTTCTCTGAG
ATTTTCTCAGAAAGTCTATTTAAAAATATCGAACATTCGCGGGAAGTTCC
GCCAGTAGCACCAAAAATCAATGGTATGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015717XLOC_015717Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027820-exon-sc0000646-1491911889:32541..32672TCONS_00027820-exon-sc0000646-1491911889:32541..32672Clytia hemisphaericaexon
TCONS_00027820-exon-sc0000646-1510915933:32541..32672TCONS_00027820-exon-sc0000646-1510915933:32541..32672Clytia hemisphaericaexon
TCONS_00027820-exon-sc0000646-1575043694:32541..32672TCONS_00027820-exon-sc0000646-1575043694:32541..32672Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000646supercontigsc0000646:32541..32672 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027820 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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