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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027819 ID=TCONS_00027819|Name=TCONS_00027819|organism=Clytia hemisphaerica|type=transcript|length=1123bp
gaaaaataagtttgcaaGATGTTTTTCGCGATTATGATGTTCCCGATGTT
CCTGACACCATGTAGCGCCCCTGACAACGATTGATCGTTTGAGCGTGTTG
ACTGGATTCACTCCAGAAGACTATGTTCCTGTGGAAGAGGACTTTAAACG
ACAAAAACCATTAagcaaattttagcaaaaaaggaAATAACGACGCGCAG
AATTAAATGGAGAATTGAAACGAAATCTTAGTGATGATAATAAAGAATCG
ACAAACACAATGATGACGACAAGAAACAATCAATGAGGATCGAAATGATC
TAGAAGTGGTAAGTTGTAAAGATCAAAATGATCTAGAAGTGGTAAGTTGT
AAAGGCTAACGAAATGATCTAGAAGTGGTAAGTTGTAAAGGCTAACGAAA
TGATCTAGAAGTGGTTAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTAAGTT
GTAAAGGCTAACGAAATGATCTAGAAGTGGTAAGTTGTAAAGGCTAACGA
AATGATCTAGAAGTGGTTAGTTGTAAAGGCTAACGAAATGATCTAGAAGT
GGTAAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTAAGTTGTAAAG
GCTAACGAAATGATCTAGAAGTGGTTAGTTGTAAAGGCCAACGAAATGAT
CTAGAAGTGGTAAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTTAG
TTGTAAAGGCTAACGAAATGATGTAGAAGTGGTTAGTTGTAAAGGCTAAC
GAAATGATCTAGAAGTGGTAAGTTGTAAAGGCTAACGAAATGATCTAGAA
GTGGTAAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTAAGTTGTAA
AGGCCAACGAAATGGTCTAGAAGTGGTAAGTTGTAAAGGCTAACGAAATG
ATCTAGAAGTGGTTAGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTT
AGTTGTAAAGGCTAACGAAATGATCTAGAAGTGGTAAGTTTTAAAGGCTA
ACGAAATGATCTAGAAGTGGTTA Run BLAST on NCBI transcript from alignment at sc0000646:24981..26103 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027819 ID=TCONS_00027819|Name=TCONS_00027819|organism=Clytia hemisphaerica|type=transcript|length=1123bp|location=Sequence derived from alignment at sc0000646:24981..26103 (Clytia hemisphaerica)
TAACCACTTCTAGATCATTTCGTTAGCCTTTAAAACTTACCACTTCTAGA
TCATTTCGTTAGCCTTTACAACTAACCACTTCTAGATCATTTCGTTAGCC
TTTACAACTAACCACTTCTAGATCATTTCGTTAGCCTTTACAACTTACCA
CTTCTAGACCATTTCGTTGGCCTTTACAACTTACCACTTCTAGATCATTT
CGTTAGCCTTTACAACTTACCACTTCTAGATCATTTCGTTAGCCTTTACA
ACTTACCACTTCTAGATCATTTCGTTAGCCTTTACAACTAACCACTTCTA
CATCATTTCGTTAGCCTTTACAACTAACCACTTCTAGATCATTTCGTTAG
CCTTTACAACTTACCACTTCTAGATCATTTCGTTGGCCTTTACAACTAAC
CACTTCTAGATCATTTCGTTAGCCTTTACAACTTACCACTTCTAGATCAT
TTCGTTAGCCTTTACAACTTACCACTTCTAGATCATTTCGTTAGCCTTTA
CAACTAACCACTTCTAGATCATTTCGTTAGCCTTTACAACTTACCACTTC
TAGATCATTTCGTTAGCCTTTACAACTTACCACTTCTAGATCATTTCGTT
AGCCTTTACAACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCACTTCTAGATCATTTCGTTAGCCTT
TACAACTAACCACTTCTAGATCATTTCGTTAGCCTTTACAACTTACCACT
TCTAGATCATTTCGTTAGCCTTTACAACTTACCACTTCTAGATCATTTTG
ATCTTTACAACTTACCACTTCTAGATCATTTCGATCCTCATTGATTGTTT
CTTGTCGTCATCATTGTGTTTGTCGATTCTTTATTATCATCACTAAGATT
TCGTTTCAATTCTCCATTTAATTCTGCGCGTCGTTATTtccttttttgct
aaaatttgctTAATGGTTTTTGTCGTTTAAAGTCCTCTTCCACAGGAACA
TAGTCTTCTGGAGTGAATCCAGTCAACACGCTCAAACGATCAATCGTTGT
CAGGGGCGCTACATGGTGTCAGGAACATCGGGAACATCATAATCGCGAAA
AACATCttgcaaacttatttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027819-exon-sc0000646-1491911889:24981..26103 | TCONS_00027819-exon-sc0000646-1491911889:24981..26103 | Clytia hemisphaerica | exon |
| TCONS_00027819-exon-sc0000646-1510915933:24981..26103 | TCONS_00027819-exon-sc0000646-1510915933:24981..26103 | Clytia hemisphaerica | exon |
| TCONS_00027819-exon-sc0000646-1575043694:24981..26103 | TCONS_00027819-exon-sc0000646-1575043694:24981..26103 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000646 | supercontig | sc0000646:24981..26103 . |
Blast
The following BLAST results are available for this feature:
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