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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027816 ID=TCONS_00027816|Name=TCONS_00027816|organism=Clytia hemisphaerica|type=transcript|length=1013bp
CGGGTTGACGAAAGAATTGACGCAAAAGAATGATTTCATGATGTTGAAAA
ACTATATTCAGTCTTTAAAATTCTGAATGCAAATTTACTACATGCTAATC
TGGATGGTTCCACATGTGACTTGATTAAACACTAACAAAAAGTCCCAGCA
AATCAGttcattgaaaaattgattgtccgtcatcaaaaaacttttcactA
TCTAAAGTATTACAGTTTAAAACTTTTAGttcttatgaatttgaaaaaga
cttttttttcCACCATACTGTGGACACTGGCCAAATCGAACTaccattat
tcgaatctttctactATTCAAACCATTTCTCATTTACCGTCAATTAGAAG
CAATCCTAAAgttctttctataattcaatgTTGAATGAGCGAGAGGCAAC
TAAAGATTAAGTTTTAACAGGCATTTTTCCGGCATTTCTTAAGATTCAGT
AAAGCGAACACACATGATGATAAAATGTAATCAAATATTTTAACTGTGCA
TGCAAGGGTAAAAAAGAAATGTTTGTTAAGAGAGAAAAATTCAGGCCATT
CAAAATGCCCTAGAATTAATTCTTATCAATCACTCTATGTTCCTAAAGTC
CAAGGAAAATTGCGAAGACCAGTTTTCTGAATCGAACTTACACTAACTCC
AAACtaaagaaaaatcgaaaacaGCCATGAACAAAGTCCACGAGCCACTG
AATATCAAAGATTATGTTGATATACCCCTGAATCAGAGACTCGCTTGGAC
TGCCACTTCACgaaaaatttgctcaaaattcGTTTCCGATGGAAAAAGTA
CTCTAAAATTTAAACCTGACTAAATTTAGGAAATCgtttttgattttatc
ctcaCTTGAAATTGGAGATATTGCTTTGCAAAACCATACCTACTAGACTT
TCTATCTCTatttagcctggagatccatgctatgatttcttatttcatat
attgatggcgaaatataccgggtgcaccaaaaaaaaagtatacagctttg
tcgagatattgtg Run BLAST on NCBI transcript from alignment at sc0000646:10471..11483 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027816 ID=TCONS_00027816|Name=TCONS_00027816|organism=Clytia hemisphaerica|type=transcript|length=1013bp|location=Sequence derived from alignment at sc0000646:10471..11483 (Clytia hemisphaerica)
cacaatatctcgacaaagctgtatactttttttttggtgcacccggtata
tttcgccatcaatatatgaaataagaaatcatagcatggatctccaggct
aaatAGAGATAGAAAGTCTAGTAGGTATGGTTTTGCAAAGCAATATCTCC
AATTTCAAGtgaggataaaatcaaaaacGATTTCCTAAATTTAGTCAGGT
TTAAATTTTAGAGTACTTTTTCCATCGGAAACgaattttgagcaaatttt
tcGTGAAGTGGCAGTCCAAGCGAGTCTCTGATTCAGGGGTATATCAACAT
AATCTTTGATATTCAGTGGCTCGTGGACTTTGTTCATGGCtgttttcgat
ttttctttaGTTTGGAGTTAGTGTAAGTTCGATTCAGAAAACTGGTCTTC
GCAATTTTCCTTGGACTTTAGGAACATAGAGTGATTGATAAGAATTAATT
CTAGGGCATTTTGAATGGCCTGAATTTTTCTCTCTTAACAAACATTTCTT
TTTTACCCTTGCATGCACAGTTAAAATATTTGATTACATTTTATCATCAT
GTGTGTTCGCTTTACTGAATCTTAAGAAATGCCGGAAAAATGCCTGTTAA
AACTTAATCTTTAGTTGCCTCTCGCTCATTCAAcattgaattatagaaag
aacTTTAGGATTGCTTCTAATTGACGGTAAATGAGAAATGGTTTGAATag
tagaaagattcgaataatggtAGTTCGATTTGGCCAGTGTCCACAGTATG
GTGgaaaaaaaagtctttttcaaattcataagaaCTAAAAGTTTTAAACT
GTAATACTTTAGATagtgaaaagttttttgatgacggacaatcaattttt
caatgaaCTGATTTGCTGGGACTTTTTGTTAGTGTTTAATCAAGTCACAT
GTGGAACCATCCAGATTAGCATGTAGTAAATTTGCATTCAGAATTTTAAA
GACTGAATATAGTTTTTCAACATCATGAAATCATTCTTTTGCGTCAATTC
TTTCGTCAACCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027816-exon-sc0000646-1491911889:10471..11483 | TCONS_00027816-exon-sc0000646-1491911889:10471..11483 | Clytia hemisphaerica | exon |
| TCONS_00027816-exon-sc0000646-1510915933:10471..11483 | TCONS_00027816-exon-sc0000646-1510915933:10471..11483 | Clytia hemisphaerica | exon |
| TCONS_00027816-exon-sc0000646-1575043694:10471..11483 | TCONS_00027816-exon-sc0000646-1575043694:10471..11483 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000646 | supercontig | sc0000646:10471..11483 . |
Blast
The following BLAST results are available for this feature:
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