TCONS_00027567 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027567
Unique NameTCONS_00027567
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1809

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027567 ID=TCONS_00027567|Name=TCONS_00027567|organism=Clytia hemisphaerica|type=transcript|length=1809bp
ATTAAGTATTATAATGTTTACATAGTGATTACACCTTATCAAACGGCAAA
TCTTAGACAAAAAATAAAGCCCAAAAGAGCTGTGTAACACACTAAGATTC
ATCTTTGGGGAAGAATTTTACTACAGGCAGGTTAGGACCATCATACTTCT
CTTGTCTAAAACTTTTTCAGGCTTGACAGACCCTGCTacttattttttag
aaatacaacattaaaaacaaaacaaaatggaaaCTGATGAGTGCCCAAAG
ATAGAGAAAGCTTCTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGT
GAAACATTTTGAGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGA
AGGGCTATTCTGAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGC
CCTTCAAAATCTACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGT
CATTTTACTTGTATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTC
CTGAGGCAAACAACTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAG
TATGTTTTGCCTTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCAT
TGTTTACAATAAATGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAA
CATGCAAGTATTGCTCAAATATTGTCAAACTCAACAATAATACACTAGAC
AAGTACAAGGATTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTT
CCAACAACCTGTTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGC
AAATCAATATGGAACTACTTAGCAAGTTATACCAAACACATCCCCTCCTT
TCACACTCAATGGGAAGTTGTGTTTATGAAACAACCGTGACTCAAACCTC
AAATTTTTATGATTTCATTACTGCTTATGTGGATAAAACATTACAAAACA
ATTGGCATATTAGATGGGAGAATTGTGATACAAAATCAGCAAAGATCATT
CGTAAATACTACTCAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAA
CCCGACTAATACAATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACA
AGTTTATCGTTGAATCAAGCGAAGGTCGCTGGCTGACTGTTGTTTCTGGT
TCAATGAAGGTGTATTTGAACCCAACTtacccacagtgtaaacatgaTTA
TGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGTCAAGCAGTGTTTT
ACTATCCAAACGTATGGGAAATCGATTACGAAATAATAAGCAAAGATGAT
ACACTAGCTGTCTCCACATCACTTGTTTGGGACCAGTAAACTAAAGAATC
ACGACACGAGGTTTTCATAACGAATTCAAATGCAAATTTTAATGCTATCA
ACTGTACACTATTTTCATTTATATACAATAATCCGGGGAGAGGTACTTAG
GAAAAATATAGGTGCTTGGTATGCTCGTACTTGAGGGGTaatacaaaaag
acaaaaaagtcaAGATGGTACCGGGTGtccaagaaaaaagtccccctTTT
TGAGATGAATATTTTCGAAAAGTATTGggaattttagaaaaatctttttg
catcgtaaagaggaaaggctaacttaaattttgatgtatcatacATAAAA
ATCTGATCAATATTCAAAAGGTTattagaaaaaactttttttgtgatttc
agaaaatcgtcaaaaatggtcaaaaacgaGGGTATCAAATTTTAAGCAAT
TAATTCGATAATGACACTCTTTTTAAGAGTTTTGCGACTTCGTCAATAGT
TATAATGgt
Run BLAST on NCBI

protein sequence of TCONS_00027567-protein

>TCONS_00027567-protein ID=TCONS_00027567-protein|Name=TCONS_00027567-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
METDECPKIEKASQKLLDLSYDERVKHFEKEAMSLYQFCLKKGYSEGDMQ
TCVSKLYGPSKSTTVKALEDSQRSVILLVLLIGLVGAIYSSPEANNFVVA
HYKLFTIKYVLPYWNFGQLWNEDCIVYNKWLPEDKFEINEKTCKYCSNIV
KLNNNTLDKYKDFSKSEMSKHYLAFQQPVIVEDATKGWPSTQINMELLSK
LYQTHPLLSHSMGSCVYETTVTQTSNFYDFITAYVDKTLQNNWHIRWENC
DTKSAKIIRKYYSRLYFIPDSVQSNPTNTIIAARGASPEKHKFIVESSEG
RWLTVVSGSMKVYLNPTYPQCKHDYGCDTTVFELNAGQAVFYYPNVWEID
YEIISKDDTLAVSTSLVWDQ
Run BLAST on NCBI

transcript from alignment at sc0000635:50483..54611+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027567 ID=TCONS_00027567|Name=TCONS_00027567|organism=Clytia hemisphaerica|type=transcript|length=4129bp|location=Sequence derived from alignment at sc0000635:50483..54611+ (Clytia hemisphaerica)
ATTAAGTATTATAATGTTTACATAGTGATTACACCTTATCAAACGGCAAA TCTTAGACAAAAAATAAAGCCCAAAAGAGCTGTGTAACACACTAAGATTC ATCTTTGGGGAAGAATTTTACTACAGGCAGGTTAGGACCATCATACTTCT CTTGTCTAAAACTTTTTCAGGCTTGACAGACCCTGCTacttattttttag aaatacaacattaaaaacaaaacaaaatggaaaCTGATGAGTGCCCAAAG ATAGAGAAAGCTTCTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGT GAAACATTTTGAGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGA AGGGCTATTCTGAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGC CCTTCAAAATCTACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGT CATTTTACTTGTATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTC CTGAGGCAAACAACTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAG GTATTTTGGTTTAGGATTTTTTTGGCATCTTGATCATGAACAATAATATG AAGCCGATATTGATATTATATAAGTACCCTCTCTTTGATTTGCTTTGATT GCTCAAGTTTGTTAATAACTATTCTGAAaagttaaagggataatcagatg gtttgtaatatttggcatgtgggatccttctacaatcagtgccataacat attggcacttttggctaatttaccattttttgaagttcgagcgagaatgt caatttcaggccttcgacttgatttcatcaattatttcgatctgggaggg atttattggtttctagtctatatttcaagccctactggaccattcttaag tctagcgttaaaactcagagttaaaactctacccttcgaacctacattag agcacttacaaatctgttgtggtttcaaaacttcccggtgaatttccctt ttgtgccaagtattttgtcactgattgtagattgTCCTGAGAAAAATCTC AAAATATTTTTACCTAACTATTTTCCAAAGTCGAGATATTTTTAAGTTAC AAGTTTTTGACTTTTAGAATGAAAACAATAGAATTTCAACGTAAGAACCG TGTAAGAACCCATTTTAAAAAATTTCAAATTTTGATATCTCGATTTTGGA AAACTGTGTTGTAATCTAAATATCTCAAACCATCTAACTATCCCTTTAAG ATTCATaacattttttagttttctccAAATTTCACCAATTTCAGTATGTT TTGCCTTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCATTGTTTA CAATAAATGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAACATGCA AGTATTGCTCAAATATTGTCAAACTCAACAATAATACACTAGACAAGTAC AAGGATTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTTCCAACA ACCTGTTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGCAAATCA ATATGGAACTACTTAGCAAGGTataataaatttcaatttttatgcaAAGT TTTGGAGGTTGATTAGAGAGCTGGTTATGGGGTAGAGTACGTTTCATTTC GAACCCAAAGctcctacacgttttttctcAATGAAAATAAACTATATAAC AACAAAATGCTTTGACAcatttgaccaaaatattttgataaagctaagaa caattttaaacaCGTTTTCTAAGGAAATTGCAtgaaaatacttacaaaat ggttgaaataagaacatgtttagaacactttaggcttgaaacccaaaaag tttaGATTATCCGAAAGCTTTGAcgtttatcaaaaaatatatactCTTCT AGTAAGAGTAAGACAATTATTGTGTAGACCAACTATAGTGCTGCATCTTT GCTATTGTAAATGCTTGCCACCTATATCATTCAAACAAGAGAAGGTCACT CTCATTTTAGAGATGGCAACTTTCTTATGCTCTTGGGTGATGATGATGAG CAtgacaagaactttcttttaaatgaaaacCTGCATTTAGTGTAAATAAT TGAAGAAATGACTTTTTTAGGTTTCAACAAATAAAGCTCTTATTCTGGCA ATTTTGGGTAATTGGTGGTACCTATACAAcagatttctttattttatttt actttcagTTATACCAAACACATCCCCTCCTTTCACACTCAATGGGAAGT TGTGTTTATGAAACAACCGTGACTCAAACCTCAAATTTTTATGATTTCAT TACTGCTTATGTGGATAAAACATTACAAAACAATTGGCATATTAGATGGT TGGtaatttatatttctttttttttgatgtGCCGATTTTACTGTATTTTA CTTTATCTTCTTGAGaaagatacaaaaaaatacctacgtttttattcttt ttctatgtttcagAAATCtgaaataaaagagattttggTTTTGTGTTTTC ATGATGTCACGCAATTCATAATCTAATGAGGTTATCTTTATTTTCTCAGG GAGAATTGTGATACAAAATCAGCAAAGATCATTCGTAAATACTACTCAAG GCTTTATTTCATCCCAGACAGTGTACAATCAAACCCGACTAATACAATCA TTGCTGCTAGAGGTGCAAGTCCTGAAAAACACAAGGTATAATTTGATGGA AATTGTTCTCAAGACTTTAACTTTAACCTTCCGGTGATGTTGCCTAAAAG ATAACTTCCTGGGGTTCCTGATTTTGTCACTTCATGGTCGCTATTTTGGT CGATATATAGGAAATGGTATTAGAGGCAGTTCCCGGTGAATGTCTTTACT ACTAAACTAAACTAGACTAAACTAGTAAATATAATTTATTTTGTCTCTTT AAAAAGAAGGGGTAAGTTATTAATCCTCGACGACCATCGGGAGTGCTCAA AGCCACCTTTCCTGGACAGGAAAAGCGCTACCTTCCTGATTTCCATGCTT ATGTGTTTTCAGTTTATCGTTGAATCAAGCGAAGGTCGCTGGCTGACTGT TGTTTCTGGTTCAATGAAGGTGTATTTGAACCCAACTtacccacagtgta aacatgaTTATGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGTCAA GCAGGTATTTTCCTTATTTATTTCACAATAGTGCCTGATTGGATATCAGG CAGCAAAAACAGGGGAAATGGAATTAAGAGGCGGTTACCCAGTGAATTTC CTGgcagatttttgtattttctggTATTTTCCGGTATTTGCCAgtatatt tatttattcttttttacATGAGACATCAGTTATGTATCTTTCAGGGTCAT TTCCGGAGTACTCAAAGCCAATTTTCTCGATCAGAAAACATGCCTCCTTT CTTATTCGGAAAATCTAGCTTTTCGGGAGGTTTATATTTCTCCGTTAGGG AAATATTTTCTGTTAAGGCAAATACTGTTAAGTATTAGTAAGATTTTGAT ATAGTGTTACCGATTGCCAAGCGATCAGATCTACCTGAAAGTATCATTTT AAATTTCGTTTTAGTGTTTTACTATCCAAACGTATGGGAAATCGATTACG AAATAATAAGCAAAGATGATACACTAGCTGTCTCCACATCACTTGTTTGG GACCAGTAAACTAAAGAATCACGACACGAGGTTTTCATAACGAATTCAAA TGCAAATTTTAATGCTATCAACTGTACACTATTTTCATTTATATACAATA ATCCGGGGAGAGGTACTTAGGAAAAATATAGGTGCTTGGTATGCTCGTAC TTGAGGGGTaatacaaaaagacaaaaaagtcaAGATGGTACCGGGTGtcc aagaaaaaagtccccctTTTTGAGATGAATATTTTCGAAAAGTATTGgga attttagaaaaatctttttgcatcgtaaagaggaaaggctaacttaaatt ttgatgtatcatacATAAAAATCTGATCAATATTCAAAAGGTTattagaa aaaactttttttgtgatttcagaaaatcgtcaaaaatggtcaaaaacgaG GGTATCAAATTTTAAGCAATTAATTCGATAATGACACTCTTTTTAAGAGT TTTGCGACTTCGTCAATAGTTATAATGgt

Coding sequence (CDS) from alignment at sc0000635:50483..54611+

>TCONS_00027567 ID=TCONS_00027567|Name=TCONS_00027567|organism=Clytia hemisphaerica|type=CDS|length=6678bp|location=Sequence derived from alignment at sc0000635:50483..54611+ (Clytia hemisphaerica)
atggaaaCTGATGAGTGCCCAAAGATAGAGAAAGCTTCTCAGAAGTTGCT
TGACTTGTCTTATGATGAGAGAGTGAAACATTTTGAGAAGGAAGCAATGA
GTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCTGAAGGAGATATGCAA
ACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATCTACAACTGTTAAAGC
ATTGGAAGATTCACAACGTTCAGTCATTTTACTTGTATTATTGATTGGCT
TGGTTGGAGCTATTTACTCATCTCCTGAGGCAAACAACTTTGTTGTTGCT
CATTACAAGTTATTCACTATCAAGTATGTTTTGCCTTATTGGAACTTTGG
CCAACTTTGGAATGAAGACTGCATTGTTTACAATAAATGGCTTCCGGAAG
ACAAGTTCGAAATCAACGAAAAAACATGCAAGTATTGCTCAAATATTGTC
AAACTCAACAATAATACACTAGACAAGTACAAGGATTTCAGTAAAAGCGA
GATGTCTAAACATTATTTGGCTTTCCAACAACCTGTTATTGTTGAGGATG
CAACCAAAGGATGGCCTTCAACGCAAATCAATATGGAACTACTTAGCAAG
TTATACCAAACACATCCCCTCCTTTCACACTCAATGGGAAGTTGTGTTTA
TGAAACAACCGTGACTCAAACCTCAAATTTTTATGATTTCATTACTGCTT
ATGTGGATAAAACATTACAAAACAATTGGCATATTAGATGGGAGAATTGT
GATACAAAATCAGCAAAGATCATTCGTAAATACTACTCAAGGCTTTATTT
CATCCCAGACAGTGTACAATCAAACCCGACTAATACAATCATTGCTGCTA
GAGGTGCAAGTCCTGAAAAACACAAGTTTATCGTTGAATCAAGCGAAGGT
CGCTGGCTGACTGTTGTTTCTGGTTCAATGAAGGTGTATTTGAACCCAAC
TtacccacagtgtaaacatgaTTATGGTTGTGATACTACTGTCTTTGAAC
TCAATGCTGGTCAAGCAGTGTTTTACTATCCAAACGTATGGGAAATCGAT
TACGAAATAATAAGCAAAGATGATACACTAGCTGTCTCCACATCACTTGT
TTGGGACCAGTAAatggaaaCTGATGAGTGCCCAAAGATAGAGAAAGCTT
CTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGTGAAACATTTTGAG
AAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCTGA
AGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATCTA
CAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGTCATTTTACTTGTA
TTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTCCTGAGGCAAACAA
CTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAGTATGTTTTGCCTT
ATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCATTGTTTACAATAAA
TGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAACATGCAAGTATTG
CTCAAATATTGTCAAACTCAACAATAATACACTAGACAAGTACAAGGATT
TCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTTCCAACAACCTGTT
ATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGCAAATCAATATGGA
ACTACTTAGCAAGTTATACCAAACACATCCCCTCCTTTCACACTCAATGG
GAAGTTGTGTTTATGAAACAACCGTGACTCAAACCTCAAATTTTTATGAT
TTCATTACTGCTTATGTGGATAAAACATTACAAAACAATTGGCATATTAG
ATGGGAGAATTGTGATACAAAATCAGCAAAGATCATTCGTAAATACTACT
CAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAACCCGACTAATACA
ATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACAAGTTTATCGTTGA
ATCAAGCGAAGGTCGCTGGCTGACTGTTGTTTCTGGTTCAATGAAGGTGT
ATTTGAACCCAACTtacccacagtgtaaacatgaTTATGGTTGTGATACT
ACTGTCTTTGAACTCAATGCTGGTCAAGCAGTGTTTTACTATCCAAACGT
ATGGGAAATCGATTACGAAATAATAAGCAAAGATGATACACTAGCTGTCT
CCACATCACTTGTTTGGGACCAGTAAatggaaaCTGATGAGTGCCCAAAG
ATAGAGAAAGCTTCTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGT
GAAACATTTTGAGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGA
AGGGCTATTCTGAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGC
CCTTCAAAATCTACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGT
CATTTTACTTGTATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTC
CTGAGGCAAACAACTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAG
TATGTTTTGCCTTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCAT
TGTTTACAATAAATGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAA
CATGCAAGTATTGCTCAAATATTGTCAAACTCAACAATAATACACTAGAC
AAGTACAAGGATTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTT
CCAACAACCTGTTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGC
AAATCAATATGGAACTACTTAGCAAGTTATACCAAACACATCCCCTCCTT
TCACACTCAATGGGAAGTTGTGTTTATGAAACAACCGTGACTCAAACCTC
AAATTTTTATGATTTCATTACTGCTTATGTGGATAAAACATTACAAAACA
ATTGGCATATTAGATGGGAGAATTGTGATACAAAATCAGCAAAGATCATT
CGTAAATACTACTCAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAA
CCCGACTAATACAATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACA
AGTTTATCGTTGAATCAAGCGAAGGTCGCTGGCTGACTGTTGTTTCTGGT
TCAATGAAGGTGTATTTGAACCCAACTtacccacagtgtaaacatgaTTA
TGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGTCAAGCAGTGTTTT
ACTATCCAAACGTATGGGAAATCGATTACGAAATAATAAGCAAAGATGAT
ACACTAGCTGTCTCCACATCACTTGTTTGGGACCAGTAAatggaaaCTGA
TGAGTGCCCAAAGATAGAGAAAGCTTCTCAGAAGTTGCTTGACTTGTCTT
ATGATGAGAGAGTGAAACATTTTGAGAAGGAAGCAATGAGTTTGTATCAA
TTTTGTTTAAAGAAGGGCTATTCTGAAGGAGATATGCAAACTTGTGTCTC
AAAGCTTTATGGCCCTTCAAAATCTACAACTGTTAAAGCATTGGAAGATT
CACAACGTTCAGTCATTTTACTTGTATTATTGATTGGCTTGGTTGGAGCT
ATTTACTCATCTCCTGAGGCAAACAACTTTGTTGTTGCTCATTACAAGTT
ATTCACTATCAAGTATGTTTTGCCTTATTGGAACTTTGGCCAACTTTGGA
ATGAAGACTGCATTGTTTACAATAAATGGCTTCCGGAAGACAAGTTCGAA
ATCAACGAAAAAACATGCAAGTATTGCTCAAATATTGTCAAACTCAACAA
TAATACACTAGACAAGTACAAGGATTTCAGTAAAAGCGAGATGTCTAAAC
ATTATTTGGCTTTCCAACAACCTGTTATTGTTGAGGATGCAACCAAAGGA
TGGCCTTCAACGCAAATCAATATGGAACTACTTAGCAAGTTATACCAAAC
ACATCCCCTCCTTTCACACTCAATGGGAAGTTGTGTTTATGAAACAACCG
TGACTCAAACCTCAAATTTTTATGATTTCATTACTGCTTATGTGGATAAA
ACATTACAAAACAATTGGCATATTAGATGGGAGAATTGTGATACAAAATC
AGCAAAGATCATTCGTAAATACTACTCAAGGCTTTATTTCATCCCAGACA
GTGTACAATCAAACCCGACTAATACAATCATTGCTGCTAGAGGTGCAAGT
CCTGAAAAACACAAGTTTATCGTTGAATCAAGCGAAGGTCGCTGGCTGAC
TGTTGTTTCTGGTTCAATGAAGGTGTATTTGAACCCAACTtacccacagt
gtaaacatgaTTATGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGT
CAAGCAGTGTTTTACTATCCAAACGTATGGGAAATCGATTACGAAATAAT
AAGCAAAGATGATACACTAGCTGTCTCCACATCACTTGTTTGGGACCAGT
AAatggaaaCTGATGAGTGCCCAAAGATAGAGAAAGCTTCTCAGAAGTTG
CTTGACTTGTCTTATGATGAGAGAGTGAAACATTTTGAGAAGGAAGCAAT
GAGTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCTGAAGGAGATATGC
AAACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATCTACAACTGTTAAA
GCATTGGAAGATTCACAACGTTCAGTCATTTTACTTGTATTATTGATTGG
CTTGGTTGGAGCTATTTACTCATCTCCTGAGGCAAACAACTTTGTTGTTG
CTCATTACAAGTTATTCACTATCAAGTATGTTTTGCCTTATTGGAACTTT
GGCCAACTTTGGAATGAAGACTGCATTGTTTACAATAAATGGCTTCCGGA
AGACAAGTTCGAAATCAACGAAAAAACATGCAAGTATTGCTCAAATATTG
TCAAACTCAACAATAATACACTAGACAAGTACAAGGATTTCAGTAAAAGC
GAGATGTCTAAACATTATTTGGCTTTCCAACAACCTGTTATTGTTGAGGA
TGCAACCAAAGGATGGCCTTCAACGCAAATCAATATGGAACTACTTAGCA
AGTTATACCAAACACATCCCCTCCTTTCACACTCAATGGGAAGTTGTGTT
TATGAAACAACCGTGACTCAAACCTCAAATTTTTATGATTTCATTACTGC
TTATGTGGATAAAACATTACAAAACAATTGGCATATTAGATGGGAGAATT
GTGATACAAAATCAGCAAAGATCATTCGTAAATACTACTCAAGGCTTTAT
TTCATCCCAGACAGTGTACAATCAAACCCGACTAATACAATCATTGCTGC
TAGAGGTGCAAGTCCTGAAAAACACAAGTTTATCGTTGAATCAAGCGAAG
GTCGCTGGCTGACTGTTGTTTCTGGTTCAATGAAGGTGTATTTGAACCCA
ACTtacccacagtgtaaacatgaTTATGGTTGTGATACTACTGTCTTTGA
ACTCAATGCTGGTCAAGCAGTGTTTTACTATCCAAACGTATGGGAAATCG
ATTACGAAATAATAAGCAAAGATGATACACTAGCTGTCTCCACATCACTT
GTTTGGGACCAGTAAatggaaaCTGATGAGTGCCCAAAGATAGAGAAAGC
TTCTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGTGAAACATTTTG
AGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGAAGGGCTATTCT
GAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGCCCTTCAAAATC
TACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGTCATTTTACTTG
TATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTCCTGAGGCAAAC
AACTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAGTATGTTTTGCC
TTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCATTGTTTACAATA
AATGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAACATGCAAGTAT
TGCTCAAATATTGTCAAACTCAACAATAATACACTAGACAAGTACAAGGA
TTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTTCCAACAACCTG
TTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGCAAATCAATATG
GAACTACTTAGCAAGTTATACCAAACACATCCCCTCCTTTCACACTCAAT
GGGAAGTTGTGTTTATGAAACAACCGTGACTCAAACCTCAAATTTTTATG
ATTTCATTACTGCTTATGTGGATAAAACATTACAAAACAATTGGCATATT
AGATGGGAGAATTGTGATACAAAATCAGCAAAGATCATTCGTAAATACTA
CTCAAGGCTTTATTTCATCCCAGACAGTGTACAATCAAACCCGACTAATA
CAATCATTGCTGCTAGAGGTGCAAGTCCTGAAAAACACAAGTTTATCGTT
GAATCAAGCGAAGGTCGCTGGCTGACTGTTGTTTCTGGTTCAATGAAGGT
GTATTTGAACCCAACTtacccacagtgtaaacatgaTTATGGTTGTGATA
CTACTGTCTTTGAACTCAATGCTGGTCAAGCAGTGTTTTACTATCCAAAC
GTATGGGAAATCGATTACGAAATAATAAGCAAAGATGATACACTAGCTGT
CTCCACATCACTTGTTTGGGACCAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015545XLOC_015545Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027567-proteinTCONS_00027567-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027567-exon-sc0000635-1491911889:50483..51032TCONS_00027567-exon-sc0000635-1491911889:50483..51032Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:50483..51032TCONS_00027567-exon-sc0000635-1510915933:50483..51032Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:50483..51032TCONS_00027567-exon-sc0000635-1575043694:50483..51032Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1491911889:51777..52052TCONS_00027567-exon-sc0000635-1491911889:51777..52052Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:51777..52052TCONS_00027567-exon-sc0000635-1510915933:51777..52052Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:51777..52052TCONS_00027567-exon-sc0000635-1575043694:51777..52052Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1491911889:52691..52830TCONS_00027567-exon-sc0000635-1491911889:52691..52830Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:52691..52830TCONS_00027567-exon-sc0000635-1510915933:52691..52830Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:52691..52830TCONS_00027567-exon-sc0000635-1575043694:52691..52830Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1491911889:53032..53167TCONS_00027567-exon-sc0000635-1491911889:53032..53167Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:53032..53167TCONS_00027567-exon-sc0000635-1510915933:53032..53167Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:53032..53167TCONS_00027567-exon-sc0000635-1575043694:53032..53167Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1491911889:53495..53636TCONS_00027567-exon-sc0000635-1491911889:53495..53636Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:53495..53636TCONS_00027567-exon-sc0000635-1510915933:53495..53636Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:53495..53636TCONS_00027567-exon-sc0000635-1575043694:53495..53636Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1491911889:54047..54611TCONS_00027567-exon-sc0000635-1491911889:54047..54611Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1510915933:54047..54611TCONS_00027567-exon-sc0000635-1510915933:54047..54611Clytia hemisphaericaexon
TCONS_00027567-exon-sc0000635-1575043694:54047..54611TCONS_00027567-exon-sc0000635-1575043694:54047..54611Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000635supercontigsc0000635:50483..54611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.3953 21.7309 5.95014 3.41417 21.8885 17.6747 17.8458 18.7086 14.6679 13.7248 11.794 12.5967 12.8299 13.3699 14.5928 16.7954 10.6865 13.4784 14.4726 14.5772 9.90467 9.34859 20.1865 21.0106 7.83244 9.60364 11.7057 14.2124 23.9957 19.5833
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027567 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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