XLOC_015545 (gene) - C. hemisphaerica

Overview
NameXLOC_015545
Unique NameXLOC_015545
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000635:50483..54611+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015545 ID=XLOC_015545|Name=XLOC_015545|organism=Clytia hemisphaerica|type=gene|length=4129bp|location=Sequence derived from alignment at sc0000635:50483..54611+ (Clytia hemisphaerica)
ATTAAGTATTATAATGTTTACATAGTGATTACACCTTATCAAACGGCAAA
TCTTAGACAAAAAATAAAGCCCAAAAGAGCTGTGTAACACACTAAGATTC
ATCTTTGGGGAAGAATTTTACTACAGGCAGGTTAGGACCATCATACTTCT
CTTGTCTAAAACTTTTTCAGGCTTGACAGACCCTGCTacttattttttag
aaatacaacattaaaaacaaaacaaaatggaaaCTGATGAGTGCCCAAAG
ATAGAGAAAGCTTCTCAGAAGTTGCTTGACTTGTCTTATGATGAGAGAGT
GAAACATTTTGAGAAGGAAGCAATGAGTTTGTATCAATTTTGTTTAAAGA
AGGGCTATTCTGAAGGAGATATGCAAACTTGTGTCTCAAAGCTTTATGGC
CCTTCAAAATCTACAACTGTTAAAGCATTGGAAGATTCACAACGTTCAGT
CATTTTACTTGTATTATTGATTGGCTTGGTTGGAGCTATTTACTCATCTC
CTGAGGCAAACAACTTTGTTGTTGCTCATTACAAGTTATTCACTATCAAG
GTATTTTGGTTTAGGATTTTTTTGGCATCTTGATCATGAACAATAATATG
AAGCCGATATTGATATTATATAAGTACCCTCTCTTTGATTTGCTTTGATT
GCTCAAGTTTGTTAATAACTATTCTGAAaagttaaagggataatcagatg
gtttgtaatatttggcatgtgggatccttctacaatcagtgccataacat
attggcacttttggctaatttaccattttttgaagttcgagcgagaatgt
caatttcaggccttcgacttgatttcatcaattatttcgatctgggaggg
atttattggtttctagtctatatttcaagccctactggaccattcttaag
tctagcgttaaaactcagagttaaaactctacccttcgaacctacattag
agcacttacaaatctgttgtggtttcaaaacttcccggtgaatttccctt
ttgtgccaagtattttgtcactgattgtagattgTCCTGAGAAAAATCTC
AAAATATTTTTACCTAACTATTTTCCAAAGTCGAGATATTTTTAAGTTAC
AAGTTTTTGACTTTTAGAATGAAAACAATAGAATTTCAACGTAAGAACCG
TGTAAGAACCCATTTTAAAAAATTTCAAATTTTGATATCTCGATTTTGGA
AAACTGTGTTGTAATCTAAATATCTCAAACCATCTAACTATCCCTTTAAG
ATTCATaacattttttagttttctccAAATTTCACCAATTTCAGTATGTT
TTGCCTTATTGGAACTTTGGCCAACTTTGGAATGAAGACTGCATTGTTTA
CAATAAATGGCTTCCGGAAGACAAGTTCGAAATCAACGAAAAAACATGCA
AGTATTGCTCAAATATTGTCAAACTCAACAATAATACACTAGACAAGTAC
AAGGATTTCAGTAAAAGCGAGATGTCTAAACATTATTTGGCTTTCCAACA
ACCTGTTATTGTTGAGGATGCAACCAAAGGATGGCCTTCAACGCAAATCA
ATATGGAACTACTTAGCAAGGTataataaatttcaatttttatgcaAAGT
TTTGGAGGTTGATTAGAGAGCTGGTTATGGGGTAGAGTACGTTTCATTTC
GAACCCAAAGctcctacacgttttttctcAATGAAAATAAACTATATAAC
AACAAAATGCTTTGACAcatttgaccaaaatattttgataaagctaagaa
caattttaaacaCGTTTTCTAAGGAAATTGCAtgaaaatacttacaaaat
ggttgaaataagaacatgtttagaacactttaggcttgaaacccaaaaag
tttaGATTATCCGAAAGCTTTGAcgtttatcaaaaaatatatactCTTCT
AGTAAGAGTAAGACAATTATTGTGTAGACCAACTATAGTGCTGCATCTTT
GCTATTGTAAATGCTTGCCACCTATATCATTCAAACAAGAGAAGGTCACT
CTCATTTTAGAGATGGCAACTTTCTTATGCTCTTGGGTGATGATGATGAG
CAtgacaagaactttcttttaaatgaaaacCTGCATTTAGTGTAAATAAT
TGAAGAAATGACTTTTTTAGGTTTCAACAAATAAAGCTCTTATTCTGGCA
ATTTTGGGTAATTGGTGGTACCTATACAAcagatttctttattttatttt
actttcagTTATACCAAACACATCCCCTCCTTTCACACTCAATGGGAAGT
TGTGTTTATGAAACAACCGTGACTCAAACCTCAAATTTTTATGATTTCAT
TACTGCTTATGTGGATAAAACATTACAAAACAATTGGCATATTAGATGGT
TGGtaatttatatttctttttttttgatgtGCCGATTTTACTGTATTTTA
CTTTATCTTCTTGAGaaagatacaaaaaaatacctacgtttttattcttt
ttctatgtttcagAAATCtgaaataaaagagattttggTTTTGTGTTTTC
ATGATGTCACGCAATTCATAATCTAATGAGGTTATCTTTATTTTCTCAGG
GAGAATTGTGATACAAAATCAGCAAAGATCATTCGTAAATACTACTCAAG
GCTTTATTTCATCCCAGACAGTGTACAATCAAACCCGACTAATACAATCA
TTGCTGCTAGAGGTGCAAGTCCTGAAAAACACAAGGTATAATTTGATGGA
AATTGTTCTCAAGACTTTAACTTTAACCTTCCGGTGATGTTGCCTAAAAG
ATAACTTCCTGGGGTTCCTGATTTTGTCACTTCATGGTCGCTATTTTGGT
CGATATATAGGAAATGGTATTAGAGGCAGTTCCCGGTGAATGTCTTTACT
ACTAAACTAAACTAGACTAAACTAGTAAATATAATTTATTTTGTCTCTTT
AAAAAGAAGGGGTAAGTTATTAATCCTCGACGACCATCGGGAGTGCTCAA
AGCCACCTTTCCTGGACAGGAAAAGCGCTACCTTCCTGATTTCCATGCTT
ATGTGTTTTCAGTTTATCGTTGAATCAAGCGAAGGTCGCTGGCTGACTGT
TGTTTCTGGTTCAATGAAGGTGTATTTGAACCCAACTtacccacagtgta
aacatgaTTATGGTTGTGATACTACTGTCTTTGAACTCAATGCTGGTCAA
GCAGGTATTTTCCTTATTTATTTCACAATAGTGCCTGATTGGATATCAGG
CAGCAAAAACAGGGGAAATGGAATTAAGAGGCGGTTACCCAGTGAATTTC
CTGgcagatttttgtattttctggTATTTTCCGGTATTTGCCAgtatatt
tatttattcttttttacATGAGACATCAGTTATGTATCTTTCAGGGTCAT
TTCCGGAGTACTCAAAGCCAATTTTCTCGATCAGAAAACATGCCTCCTTT
CTTATTCGGAAAATCTAGCTTTTCGGGAGGTTTATATTTCTCCGTTAGGG
AAATATTTTCTGTTAAGGCAAATACTGTTAAGTATTAGTAAGATTTTGAT
ATAGTGTTACCGATTGCCAAGCGATCAGATCTACCTGAAAGTATCATTTT
AAATTTCGTTTTAGTGTTTTACTATCCAAACGTATGGGAAATCGATTACG
AAATAATAAGCAAAGATGATACACTAGCTGTCTCCACATCACTTGTTTGG
GACCAGTAAACTAAAGAATCACGACACGAGGTTTTCATAACGAATTCAAA
TGCAAATTTTAATGCTATCAACTGTACACTATTTTCATTTATATACAATA
ATCCGGGGAGAGGTACTTAGGAAAAATATAGGTGCTTGGTATGCTCGTAC
TTGAGGGGTaatacaaaaagacaaaaaagtcaAGATGGTACCGGGTGtcc
aagaaaaaagtccccctTTTTGAGATGAATATTTTCGAAAAGTATTGgga
attttagaaaaatctttttgcatcgtaaagaggaaaggctaacttaaatt
ttgatgtatcatacATAAAAATCTGATCAATATTCAAAAGGTTattagaa
aaaactttttttgtgatttcagaaaatcgtcaaaaatggtcaaaaacgaG
GGTATCAAATTTTAAGCAATTAATTCGATAATGACACTCTTTTTAAGAGT
TTTGCGACTTCGTCAATAGTTATAATGgt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027567TCONS_00027567Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027567-proteinTCONS_00027567-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000635supercontigsc0000635:50483..54611 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.4	21.73	5.95	3.41	21.89	17.67	17.85	18.71	14.67	13.72	11.79	12.6	12.83	13.37	14.59	16.8	10.69	13.48	14.47	14.58	9.9	9.35	20.19	21.01	7.83	9.6	11.71	14.21	24	19.58