TCONS_00027475 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027475
Unique NameTCONS_00027475
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3380

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027475 ID=TCONS_00027475|Name=TCONS_00027475|organism=Clytia hemisphaerica|type=transcript|length=3380bp
attatagaagaaaagaaatattcCATTTTAATAACAAGTGGGTTGAAAAA
TACAGCAAGACGGCGAATCGAATTAGACCACCCTATTTTTCCAAAGCCTC
TTATTTTGGCAAGTCTACACCTCATGGGAGAATGGGTGAAAGTAACATTG
TTATATTTTCCCCCAAAGGAAGTGATCTACCATTAGCTGCTAGCATTGCT
AGTCGTTTGGGAGTCACACTTGGGGAAATGACATGTGGAAATTTTGCCAA
CAAAGAGACAGAAATGACAATATCAACATCAGTTCGAAACCGTGATGCGT
ACATTTTGCAAGTTATGAAGGATGACCCAAACGATTGTATCATGGAATTG
CTGATGGTTTGTTATGCACTGAAAACTTCCTGTTGCCGCAAAGTTATCGG
TGTTGTTCCCTATCTACCTTATTCAAAACAAAGCAAGATGAGAAACCGTG
GCTCAATACCCGCAAAATTAATGGCTGATCTACTTTGTAGGGCAGGTCTG
GACCACATGCTGACCATGGATTTACATTCCAAAGAAGTACAAGGTTTCTA
TGACTGTCCTGTTGATAATCTTCGTGCATCACCTTTTCTCATCCAATACA
TTCAAGATAGGATTCCCGGTTACAAAGATGCGGTCATAGTTGCACGCCAC
CCTGGTTCTGCTGCTCGAGCAAATGCGTTTGCTGAACGCCTTCAACTCAA
TATCGCAGTTCTTCATGGGGAGCACAACCAAGAAGATTCAGAGATCTGTG
ATGGGCGGCACTCACCACCGCCCGCACGCAGATCTGTCCGCCAAAGAGGT
TTCTCAGAATGCGCCAATAATGAAATGTTAGTCTCACTAGGTCTACCCAC
CAAAGTAAAGAAACCGTTATCGATTGTTGGAGATGTTAACGAGCGTGTCT
GCATCATAGTGGAAGACATTATCGACGATGCGACAATGTTGGTTCAATCA
GCCAAGATTTTACGCAACGAGGGCGCTACAAGTATATATGTAGTGGCTAC
CCACGGTTTGTTCGCCGGTGACGCTTGCAAAATCATCATGGAGTCTTGCA
TTGATGAGATCATTGTGACGAACACAGTTCCCGTTGAAGAAAAGATGAAA
CAGTGTCCGAAAATTAAATCTGTGGACATCAGTGCACTACTGTCCGAAGC
TGTCCGCCGTATCCATAATGGTGAATCGATGTCTTATCTGTTTCGAAACA
TTTCTTTGGAAGATTGAGTATTTTTCTGATCTCTTGCCAAGTCAAGATTT
GTATGCTAACCTAATAACCAGCTCTAGCTAGACTAGGTTCCAATCATATG
AAGAACAAAACTCGTCTTAAACCAAAACTCTTGACTTTTTCACGATCATA
ACCTAGTCTAGTCTAAAATCAAACAAGGCACCATTTCCAATTTGGAAATC
AATCTTTGGAGCGTCATAGAAATGctgtttgaattttgttttgttggttg
gtTATTGGTACATGTGTATTACTATGGTGTGTTGTAGGTAGAAAATCAAA
GGTTTTAGTTTTTACATAGtttttcccgtttcatatcagacacattttTT
ATATCAGGCTgtcgtctcctattgttatgttatgctgatataagcaaaaa
attatttttctctttctgaccgATTTTAGTCCACATCCGTGTCAGTCCAA
TGAGAAAAActtgtaaatcaaaattaatgAGTAAAAAGGTATAACTCTTA
TTAAAAAGCTAACCTTTTTAAAGATTATCCGTAAGGCTTCAGTATTATTC
ATGTGAAGTCGAAGTTACAGTCGCCACTtactaattcgaactcaaacggA
AACTGgcttgttcgaattacagaaagtttcGAATTATAGTAAGTATATAA
TAAGTGACTAtttaacaataggaagacattgtcctgatatgaaatatgtg
tctgatatgaaacgggaacacttatgtaaaagtaATACCTTTAAGAATGC
AATAGATAagcacttattatttttttatttctcaggTTAGAATATGCTCA
TTAggtttttgacaaaatttaggttcatgttcttatatatagtACTTGCT
TGTGTGGTATGCTGTTCGCTTTTAGTTGttatgttttttgatttttgata
acaAGATTTATAtataatcaaaaacattttttttattttacacttTATTT
TATAAAGGAGATCTTTCAGACTTGCAAGCACCACATCCAACAAGGGTAAA
ATATCAGTCAGAGATACTCGTTTCGGCTATCGTTTTGACAACTTGATTTA
TTGAAAGGGTTAATAAAACAAAGACTTTTCTTCAGAGATGTTTCGTTGGT
CTTTTGTCTGAGCTGACTTACCGTCGTTTTGTATTGTATAAGATTCCCGT
TTCCGCgctaagattcttgtcactttttcGAAttctttccgctatttttc
ccgggATAACCGGCATGAAATTGGAAAGGGTTTATTTCTAAAgttacgga
aaatcttgtgaaACTGATTAACTTTCCGTAGCTTTTTTTTCAACTACCCG
AAatcctggtctttttccgctagaaaagtaGCAAGGGGATCTTAATGCGG
AAATGGGAATGTTATAGAAAATGACTTTAGGTAATGGTGTTAGTCTTGTT
TGTCTGAAATTATTAAGATTATATGTAGCATATACATTAGATGTTATAAA
ACCCTAATTacattaaagaaaatatttttcgttttcgGCTTTTAAAGCCA
CTACCGTGTAGGATTTgctaaactttctcattccTGGCGCATTACTGGGA
TCCTTCCACCACTTTCTCCGGGCATAccggtaaaaatattttttctactg
CGTACAATTGTGTGGACAATACATTGtgttccaagcccgaagggctaaac
tCGAGACTCCTGAATGGAAAATGAATCCACTTATTTctcatccagaacgc
ccgcgcgtgatTTCTACACAAACGCCGggttgaaactaaaatctaaattt
cgctaaatttcaaaaaatgcagtcttcaaaaacaaaggaaccccTCGATa
aaatccgtcgtcatgattgtgACGCGTTCTGGACGCGTTCTGGATGTGAA
ATGagtggtttcactttttcttgccagggaaaggttagagattctactct
agcccgtcgtcgggctttaaactcaatgggacAATATACTATAGCCTGTG
TATTGCTTACAAGTTGAAATAACTATCATAGTCTTCTTCCACTGTGAAAT
AGTAAAAGGAAAGTTTTGctgggaatgagaaagtttagcTGTCTATACGG
TAAGTACTTACAAATAGAATTTTATAGTAAAATCTTAcgttgatttttaa
aattaataatcTTCATTGTTTTGTTTCAATCTTCTGGAGGTACGTTGAAT
CatgccagcctcgttttcgtACAACATAAT
Run BLAST on NCBI

transcript from alignment at sc0000628:150103..164919-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027475 ID=TCONS_00027475|Name=TCONS_00027475|organism=Clytia hemisphaerica|type=transcript|length=14817bp|location=Sequence derived from alignment at sc0000628:150103..164919- (Clytia hemisphaerica)
ATTATAGAAGAAAAGAAATATTCCATTTTAATAACAAGTGGGTTGAAAAA
TACAGCAAGACGGCGAATCGAATTAGACCACCCTATTTTTCCAAAGCCTC
TTATTTTGGCAAGTCTACACCTCATGGGAGAATGGGTGAAAGTAACATTG
TTATATTTTCCCCCAAAGGAAGTGATCTACCATTAGCTGCTAGCATTGCT
AGGTAATCAATATTTTTGTGTTTGTTTTAAATCAGTATTAGTGTTGCAAT
TTTTTTCTGTGTCACCTATAGATCGGCTCTACCCAACATTTGAAAGCTAA
TGAATTTATATCTTTCAAAAAAACCTGTAAACTAAAATTCTAAAATTCTA
CTGGACTATGACAACGAAATCTGACCAATTTGGTTTGATACACAACTACA
TTTTTCAATCTTTTTTTGATGGGGAGTTCATAGTCATTTGGCAATTTAGC
GGCCAGTGTAATAATATTGTTGGCAACAGTAAACAAATAGTAAGCTAATT
ATTACAGGCAAAAACAAGAGTTTTAGGTCCTTTGAATATATATGGTCAAA
AAGTTTTAATTTTGTTTTTCTGTAAATTGGCTTATACTAATTAAGCTGAT
CTGGTATAAAATAATGATTGAAATGATATTGCAAAGCAGTGTCCCCTTTT
TTTTCAGTATTTCGTTTTACACGTTTTTTTTTATAAGGAACACGTTTATA
AGGAACTCGAGGCTGAAAGTAGTCCAAAAAATAAGGAATTGTTAAGGAAC
TGCTCAGGCTAAGAATAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTTGAACTA
GCTATGTAAATAAGGAACTCAAAAGGAACTTTGAGGCTGAAATTTTCTGT
AAAAATAAGGAACTCCAGGCTCAGAGCAAAGTTAAGGTTAAAAATAATGA
TTGAAATGATATTGCAAAGCAGTGTCCCCTTTTTTATTCAGTATTTCGTT
TTACTCTGTCTTCTACAGCTTGGTAAATCTTTCTTTTTAAAGTTTTTGCC
TGTATGCCTTCAGGAGACTGTAGAGAAATTATGTATTTACTATTTTTAAT
TATCTTTTTCTTTTGAAACAACATTTACTACTTCTTGCAAAGTTCTCGAC
ATTGTTTCAGAATTATTTATCACTTTTATTTTCAGTCGTTTGGGAGTCAC
ACTTGGGGAAATGACATGTGGAAATTTTGCCAACAAAGGTAACAGCAATG
CTGCTTTGCTTGTAGAACTTACTTTAGGCTATTTCTTGGACATGCGTATT
GATAAGTTGTTGGTAGACTGTTTTACCTATAACTTTTTATAGACAGTATT
TCATTGAAGTGGGTTTTTTACCAGGATTTCACTGAGTTTTCCCCGGAGCT
CATTTTTCCAAGAATAAATTCTTGCTGAGGAATACCTAAAAATCAAATAA
TGAACTGTGAAAAAACTTGACATTATCCTTAAATCTCACCTTTCCAAATT
TTGTCCTCTAAAAAGTATTTGAATCTGGGTATAGTACTCGACAACAAGAA
TACCCCACTTTTTTCTACATTTATTTGCAGAAAGTAAAGACGGCCCTAAC
AGGTTTCGTAAATATTTTATTAAAAAAAATTATTCCCTTGTTGTTGACTC
AAAGAACTTAACAGCCGGCTTTTTTTGTTTCATTTTCACAGAGACAGAAA
TGACAATATCAACATCAGTTCGAAACCGTGATGCGTACATTTTGCAAGTT
ATGAAGGAGTAAGACCTTTTTAAAAAAAACATCGGACAAAAACACATTGG
GCTTTACCCCCACTGTTGAGGATATTGAACCCCCTGGATATCCTACTTTA
TTAGTAAAGACTCCCTGGATATCCTCTCTTAAAAATAAGCTCAACCCCCT
GGATACCCTCTCTTATAAAGATGCTTACCCCTGGATATCGTATTTTTTAC
TTGAAAAGACACTTAGAAAGACTACCCCTGGATATCCGCTCCCTTGTAGA
TATTTAACCCCTTGGATATCCACTTTTGAACAAAATATCGTTAACCCCCT
GGATATCCGATATCCTTAACATGGGGGGGGGAGCACGGACTATTTCTGGA
AAAGCCCATTTCCATCAAAACATCTCACAAAATAGTGGAAGATTTTTGAG
TAATCGACTCCTCATGAAGACGTTACAATGCTTCTTAATCAGTCATAATT
TAATTAAGAAACATTCTTTCACACATTAATTATGCATGCGAATCACTCAA
CACTGCCAGTCTTATAAGTATGATTTGAATTGTCATTTTAAAGGTGGATA
ACCATGTCTAGAAAAAAAACGGGATAATAAAATTTCCATAATACAAAAAG
AGGTATCTTAATCCCCCTCCTCTCCCCTATTGGAACATGGCTTGGCAGCA
GGTTTTAGGTGCCTCCTAAGAATTCAGGTGACCCCTAAGATTTACGTAAC
CCCTGGTTGCCAAATATTTTAGGTGACCCCTAAGCCAATGACAAGTCGTG
AAGACGTGCTATTGCACAATTCTTTAGAAAACAATATCAAGACGTGTATT
GCACAAATTTTTAGGAATAGCTCAGCGCACACACAGTTTTCTCAGAAACA
CACTTTTTTAGACAGAAGACATTCCATAGTGAAGTTTATGATGAAAGAAA
AACAAGTTCAGAAAAAAATCACCATAGAATCTAGCCCCCAGGTCCATCTG
AAAAAATTTAGGTGACCCCTAACATGGTTAGTCCCCCTAGCCACAGGTAA
AAATCAGGTACCAATTGCTGCTCGACCTTTTAGCCCCCCCTCAGGCCGGG
GGGGGTGCTTCCAGCCATGTGAAAGGAACGTTGGAGGAGTTTCTGATGTG
AGTTCATCCTTTTAAAATCATTACTGTCCTACCTTTACCCATAATGCAGA
ATCTGGTCAAACAATTTAGCTTTAATAAACATATTAAAGGTTTTGTTTTT
AAATAAGAGTGATATCGTTTGCTCACTCATCAATTTTAATTTACAAGCTT
TTTCACATTGAATTGACACAGATGTGGAGTAAGATTGGTCAGAAAGAGGA
AAGGAAAAACATTTTTTGCTTATATCAGCATAATATAACGATAGAGAGAC
ACTGCCCTGATATGACATATGTCTGATATGAAACGGGAAGGCTTGTATAA
AAATAAAACCTTTAATATAATAAGAAATCCATTTTATTATTCAGTGACCC
AAACGATTGTATCATGGAATTGCTGATGGTTTGTTATGCACTGAAAACTT
CCTGTTGCCGCAAAGTTATCGGTGTTGTTCCCTATCTACCTTATTCAAAA
CAAAGCAAGATGAGAAACCGTGGCTCAATACCCGCAAAATTAATGGCTGA
TCTACTTTGTAGGGCAGGTAAATGGGCCATTCCATTTTACGAACATTTCC
AGAGGGTAATCCAAATGTCCAGTTTGGGAGTGTTTTTTCATTTTTCCAAG
GAGGTAAAAAGTTATTCTAAAAATTCCAGTGGATAAAAGACTGATTTTAG
TTCGTCCATCCTCACTTTTAGGTATGAAAAGAGGGTATTTTTGGAAATTT
TACCATTTTTCAGTGGGTATCCACACATTTTCAATTCTTTTTCAAGTTGT
CTCAATATTTGGCTGGCCTTTTTAAATCTTCAGCCGGCCCTAGAATTTAA
ATACTGTTGAAAATATTTCTCAATTTGATAGAAATGGTATATCATTTGTT
AATACCAAAACACTTAGATCATGCCTTTTAAATGTCAGTAAAATACATCT
AAACAATACAGTAAACTCTCGCTTATTTGAACTTCTATTATTCGAATATT
TCTATAATTCGAACTTATTTCCAGCCCCCGTCAACTAGAAACCCTCTTAA
AATACTTCCTGCCTTTCATACGAATCTCTGTAACTCGAACAAAATAAGAT
TTCTGGTCCCATTTCGAATTTGCCAGAGTCAACTGTATATCTTATCATAT
TACCGAGTTTATGTATCGGAGGATATCGAGGGCGACGGTAAGTGAAATGG
TACGAAACAAAGTCGATAGTTGGTGTACGGCTCTATATCGCCTTTGCTCA
CCTAAACAGACGACGGTATTTTGTGTTTTTTACCGTCGTCGAGCAAAGTG
GACGGTGATTTTGAAGACATGTCAACTTTGCTTTATACCGTCCCCCTCGA
TTTATCTCGAATACATAAACTCGCTATTAATGCAGGTCTGGACCACATGC
TGACCATGGATTTACATTCCAAAGAAGTACAAGGTTTCTATGACTGTCCT
GTTGATAATCTTCGTGCATCACCTTTTCTCATCCAATACATTCAAGATAG
GGTATGGTAATATGTTTGTCGATGCACCACTGGAGAGTCTTCTGAGAACT
TTTAAAAATTTCCACCCAATTCATGGTATGCACCATTGCAATGTCTTCAT
CATAGACCCAACAGCTGATTGGTTGCAAGTGACGTATTGATTGATTTTAC
GTCACTTACAACCAATCAGCTGTCGAGTCCGTGATGTAATATCAGAAGAC
ATTGCAATGGTGCATATCATGAATACATCACTTAAACAATGGAAAAAGTG
ACGTATTGGGTGAAACAAAAACAGAAAAGTTGCATAATTTCATGAAGTCA
TTGCAGTGGTGGATATCATGAATGAAATCCTTTGTCGACGCGTCTCTGTT
TTGATTTCTACTTTACCATTCAGATTACAGTGATGCTTTAATTTTTTATT
GATTTAAAAACATCATTATGATATAATCGACACATCTTTGCCGATGTCTC
AGCCATTCTAGTTCAGATTTATTTGTGTCGGCAAAAAATAGAATAGCTTC
CTATAGTATATTTTGTATATTGGGTATGACCGATTTCTGTTTTATTCAGA
TTGCAGTAATGTAATCTATGTTTTCATTGATAAAACTATACCCCCTTGTT
GATGAGGTCCCAAATTCACACTGATCTCAAACTCTTTGACTGAATCAAAA
TAGGAAGCTTATCCAGTTTTAGAGCTGACTAGTCCGCCATCTTGTTTTCA
ATTTCTAAGTTTTTATATGAAGTTTCCTGTCCTATTTTGTTTTGAATGTA
CTTCAATTTAAAGCTATGCAAAGAGCTTGAGCATAACATTATCTCTTTCA
ACTATTTTGTTTTGATTTTACAGATTCCCGGTTACAAAGATGCGGTCATA
GTTGCACGCCACCCTGGTTCTGCTGCTCGGTAACTATACACCCTTCTTGC
GCCTCATAATCCTCCCCTGACCTCCTTAATTGCGTAGAAAAAACGCGGGT
GATGTGTAGTATAGGAAAAAATATTCAAAATCACGTAATCACGCTAAAAA
GAGTCCCTCTATGACGACATTTCGCTAACCTCTTGGGGGTCTCATATATT
ATAAAATATAACACCTTGTTCTTTGTAACGAACTCTTATGTGCCTTTTTC
ATATTAATAATCACATACGTATCCTAAAAAGACTGTTATTAATTTGATAC
AAAAATCCAAGTTCTCGCAAACAATAATCATGCCTATAATGACCTTGAAA
TATCTTCACAACAACACTTTGTAACGATACTTGCTATTTTGAGAAGAGTA
TTTATTAAAGCAAGTCATCAGATCTCGATTTTAATGTCAAAGCCAGATCT
GGAAATCATCAATGTTAAGAATGAGGGAAAGGTCAAAAATAAAATCTTTG
ATTGCGCCATTGTTGGTTTTGATGATGCAATGAAAAAAAGAATTTGAAAA
TGTTGTCTTACTTTGATCTCATTGTTGATGCATGAATAATGATTCTTTCA
TTTCTGATAAAACATTTGACTGTCTGTACTGAAATTTTCCAGAGCATGCT
AGTAACACCCCAAACTTTTTTATTATTAGTGAATATATCTTACTTAGGTT
TCTCCCCCGATGTTTTTTAGAGCAAATGCGTTTGCTGAACGCCTTCAACT
CAATATCGCAGTTCTTCATGGGGAGCACAACCAAGAAGATTCAGAGATCT
GTGATGGGCGGCACTCACCACCGCCCGCACGCAGATCTGTCCGCCAAAGA
GGTTTCTCAGAATGCGCCAATAATGAAATGTTAGTCTCACTAGGTAAGCG
AGATCAATTTGTTTGCGTTTTTTAACAACAAATCTTTCACCATATCCCAA
TACATCANCGAGATCAATTTGTTTGCGTTTTTTTAACAACAAATCTTTCA
CCATATCCCAATACATTATCATATCCAGACAAAAATATATTATTATTACA
TAATCACTTAAAACGATCATTTTAAACCACGCATAACCTTCATTTCCCAT
CCAAGAGTATCCCGCGCCCCTTTAGAGAATTGAACTCACTGATTCTTAAC
TTAAAGTTAACCAACCTTGTTCCCTGCGTATTATCAGCTTTTTTATGCTT
ACTGCACTATATGATACCGACCCTGGGTTTTCTCTTGCGTCAATCAGTAA
CGTAAATAAAGCCCGGGATACACGGGGACGAAGTTTACTTGTGGATTCTT
GATATGCGTAAGTCAAGATGACGTCATATTTTTTAACGGAAGCACTCGAA
AAAAGCCGGATTTTGACCTCCGTGTTTCTATTTTTAGTAACAGAGAGTGG
TCAAATCCCGGATTTTTTTCGGATGTTCCCGCTAGAAAAATGACTCACGC
ATATCAAGAATATTCTTGACATCATCGAGTCTTAGCAATTTTAACGAAGT
TGAAGAACATAGCATTGGTGGCCCTACATACCCGTTGCTAATTTGCTTGA
CTTCCCTTAGGAATTCCCCATTAGGTAAGATGGGGGTGTTGGTGTAAAGA
AAAACAAGGGTCACGTGGTAAGTCATTGACTACCGTAAGTTGGTCTAATG
TTGACATCCCTCCTCTAATTCCGTCACCCTGCTTTAGAAATAAAAATGAA
AGGAAGGCCGGAATCGATGATAAAAATAGATTTTTACCTCTCCGAGCGCA
GCATAGAAAGATCAGCTATTCCGACTTACTTATCATTCCTATCTCTCAAG
ACGGGTGACAGAATTAGAGAAGGGATGTCGATGTTCGACCAACTTACGGT
AATTTTCTTACAAAAGCTTTTTGTTGTATGATAATTGCGCTACTTCGTTT
GTCATAGAGGATGGGATGCGTTCTACACCGCCCACCGCCCACACGGCGCC
CTTCAACAGCTCTCTTCATCGTCAGATCTCCAATCAAGGGTTGTTCGATA
TCCCACCTCCATCGCTGGGTAAAAACAACAAAACTCATTCCGCAAAATAT
ACACACAACACATAAACATCTGCATGCATATATACAATCCCCTCTTAGTA
TAGAAACCAAAACCAATTTTTTCATCATAGACCCAACAGCTGATTAGTTG
CAAATGACGTATTGACTGATTTTACGTCACTTACAACCAATCAGCTATTG
GGTCTATGATGTAATGTCAGAAGACATTGCAGTGGTGAATATCATGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAGAATATGTTAAGAACATTTTTAGGCTTAAAACTCAAAAAG
TTAAGAACATCCGAAGGCTTCAAATATTTTGGATGTTCTTATAAAAAACG
TGTATCATTTGTTTCTGTTAGCCTCTTTTTGGAAAGATGTTAGGGTACTG
TAATTAGAAATTTCAAAAATGAAAACATTTTTTCACTGTTGGATATGGAG
TTGATGCCTGCAAAAGTTCCTATTTCCAATAGAAAAAAGCTAAAACGAAT
ATGGAAATCCAAAAGGGGTAAGACATGACTAATAATCATGTGACCAATCG
ACTCAGATGTCTTTGAATAGACACAATTTATTATAGAGGCTTTGATGTTT
GTTAAAACTCATAATTCCCGCCACTATGGATGCAAACGTTCGAACTTGTA
GAGGTGGCCGTCCTCTCTTGACTCGATGAGTGAATATTTATTATTTTGTC
CCTACTATTTAAGATCTGACCCGTTGCTAGAAGACGGGGACGACTAAAAA
TGTACAGTCGAATTCAGAGTGACTGTAGAACAAACTAGACACATTTTTTT
GACTCTTGGAGTGTATTTCCATCTCAATCAATCCAAATGATAAAATAAAG
TTATAAACAATAAACGGGGACGAATTGAAATATCAATATTTCACCGCTTA
CTGCGCTAATTGCGACTTGGAATTGAATAACTCTGCGTGAGAACCCCATG
ACTCCACAGTTCACCTTCGTTTTATTCAGCGCCTACCTCATTCTAGCGAG
CACCTCATTAAAAACCGGGATTTTTCATCTCGTTTCTTAGTGAGTCCTAC
TTTGATGATTTTCGAAAAATAGAAACCTTTCAAGTGCTTTGACGCAAATT
CGATTTTTTGCTACTGCAGGAGCTTCGAAAGTTAAAAGTGACCTCAAAAA
TCGAAATCCCGGACTCAAAACATTCGAAAAAGTCGGAAAGTGGAATAGAC
GTTAATTGCGTAAAGAAAACGCGGGTGACGTCTAGTATAGGCTAACCTCA
TTTCGATACTTTTTTCCCATCAACCCTAACGGTTCAAGATGTGTCTACGA
ATCTACCACTATGGTTTTCTGACGTTTGATTAAATTTCATATTTTGCATC
CCTTTTCCGAGACTCCAACATTCTTTTGGGATGAGCATGGAAGTGGCTAG
CGTAAATAGGGTTCACTCACGTGAGTTGGAAGGCTAACCTAGGTCTGAAC
ATTTAGTTTAAAACCCCGAAGGGGCTAGAGATGAATCTTCAACTTTTCTC
AAGCAAGAAAAAGACGGATGACGGATTAAATCAAGTCCTTTCTTTGTTTT
CACGCGGCATATTTTTCGAAATCTGACAATATGTTTTACTTTCAATCTAG
CGTTTGTGTGAATGCCACGCGCGGGTGGTTTCATTTCCCATCCAGGAGTC
TCTAGTCTAGCACTTCGGGCTTGGAAGTCAATGGGTCTGAAGGCATACAA
ACCATGATTCCTCAATACTAATTTCAGTTTAAGAAATCTGAATTTCTATA
TCGAGTTGAGATGTGTCGATTTTATGCATATTTACAAATATTCAAACATG
CAAAATTCTATTCATAAATCCCTCATGACACCCCCGCAGATATCTTATAT
AAAACACTAGATATAGCTACTGTACATCTCAAATCACGACAGTTTGGGCA
AAATAATGCGCCATGTTCGAACGCTTGCTTCCATGATGGCGAAGAGGCAG
GGTATTTTTCGAATCCAGAAGTCCATATTGCCACTTTCGAGTTGGGAAGT
TGGAGAGATATCATGAAGTCTACGGCAACCGAAAGTTTTAAAATTTAATT
AATGTAGCTCAAAAGTACAAATACCAGATTAGCCAGTACCAAACATATTA
TTACTGAAAATGGTAAGGTGCTGGCTAGCAAAGCCAAAATAATTAGTACT
GCTATGTCATCGTCATTGACTGACAACATGACACGTTTTTATAAAAATAT
TGACAAAATCTTTAAATACAACGATTGTCAAACAAATCCCCCGAAAATAA
TGATCATACTGCAAGTGATGCTTATTGTAAAGAAGGATATAAGTTGACAG
TCATCTTAGCCTAAAAAAAATCGTAAAGATCGAAAGCTGGAAAAATAATG
ACACTTTCTTTTGTCATTTCATCATTGGAATTGACACTTTTTAATAAGAA
TTTTGATGGTATTATAAAATACAATGATTCTAAGGTCAATTTAATCAAGA
ATTATATTTATACTCAATGTGATGCAGGAAATATAAATGGATATGAGTTG
GAGGTGGGAATGGCTTTCCATGCTCTCAGAGCACGTGTTTAAGGGAAATG
AGCATATGACAGCTGTTATATGTATTATACGTATTATACGTATCATTATG
TGTTATATATTACTCTCATGTTACATTTACATTTCAAATTCGTACTTTTG
ATGTATGTTTATTCTTATTCGGTAGCCGGTAATTTTTCAACTTCCAACTT
TCAACTAACAACTTCCCAACTTCCCAACTCGAAAGTAGCAACTAGCAACT
TCTCGACTAGAATTGTTCCCTAACTCGATGGCGAAACCTCTAAAGAATGT
AAATAATAATTAGGAACATTGTCACAGCTCAAAAACAGAAAGGTAATTGT
GAAAAACTACATAAAAATTATTTAAAGTATTTTATACACACACACACTTA
CACTTTTTTTATAAGAACATGAGGCCTCAAAACCTCAAAATTCAAGAATC
ATTTCTAGCCCTTGGATATCCTTTGAGGTTATTGTTCGATTTTCGAACAA
CATTTTAGATAAATAGTACCAAACCCGTTTACAGACAGGCTTTATAAGTA
TTTCTGAACCAGTCATAAGTTTTTTCGATTTATACTTATTTTGTCATACA
ATCTTTTTTCTTGAAGTCCCCGAGTTTTCAATTAAAGAACAATGTGTAGT
TTCAAAGCATGAGCATGAAATTTTGACTGTTTCTCACATTTTTTGATCGC
AAATCTAACCAAAAAATGTATACTAAAAACCTTTACCCAATTAAGCTGGA
ACCCGGTCTCCTCCAAGCAGTTTGAGATCGTATTACAGATCTCCTTGCCC
ATCACGTTACACTCACATCAACAGAAATCCAAGCTAGGAACGTTTTTAGG
ATCCATGTTTAGTAGGAGTTTGTGTTAATTCCACATGATGAATATTTTTC
TCTCCCTTTTTTTCATTTAGGTCTACCCACCAAAGTAAAGAAACCGTTAT
CGATTGTTGGAGATGTTAACGAGCGTGTCTGCATCATAGTGGTATGTACA
AATATTATACCTTAAGGGAACTATTCTTTCGGAGAAACTAATTTTTCAGT
GCGAAAGAACTAAATTGGCGCATTTTGCGTGACTAATTATCGCGGTTGAC
ACCCACTTTTTGCCTAAGTCCTTTTATATTCCTAGGGTTTTTGAGGATTT
TTAGTAAAATTTGCATTTTGCGGAACTAATTTTCGCGGTAGACACCAAAA
AACGCGAAAATTAGTTCTCTTAAGGTATTCCTTTGCAAACTAGATCTAGG
TTTTTCATTTGCTGAAGTCGTGTGAAAAGTGTATCCAGTTTTAAGCGACT
GGCATCCGCCATGTTGTTTTCTGTCTCCGTCACCAAGTGGTTGCAAAATT
ATATTTGGAATAAAAATGTCCAGGCTGGAAAATAGTTGAAAAGGAGACTA
AAACAGCAGAATTGTGGCAAAAGAGGGAATTTTAAAAAACATTTTGCCAA
AAATTAACAAGCGGGGGGAGGGAATTGGAAAAAGAATGTCTGGGTGGAAA
ATTTTCGAAAGAAAATTAACGATGGGGGCGCTTATTAGGCCACCACGACT
CGCATTTGAACCAATTAAAACAAAGTGTTTCAATTTTTATTAACCAACAG
GAAGACATTATCGACGATGCGACAATGTTGGTTCAATCAGCCAAGATTTT
ACGCAACGAGGGCGCTACAAGTATATATGTAGTGGCTACCCACGGTTTGT
TCGCCGGTGACGCTTGCAAAATCATCATGGAGTCTTGCATTGATGAGGTG
AGAGTCACAATTTCGTATTCATGATATGCACCACTGCAATGTCTTCTGAC
ATTACGTCATGGACCCAATAGCTCATTGGTTGGAAGTGACGTAAAAGCAG
TCAATACGTCACTTTCAACCAATCAACTATTGGGTGGAACGGAAGACATT
GCAATGGTGCATATCATGAATATACAGTAAAGTCTCCGTAATTCGAATGT
CACCTTAATTTAAACAAGTTTCATTGTTCCTTCAAGCAACCCATGTAAAC
AGGTCTTTATAATTCAGAGGTTTCTATAACTCGAATAATATTTCAACCCC
GTTGTGTGTTCGACTTATGGAGATTCTGCTGTATATTGCGTGTTCCAGTT
ATGGAGACTTCACTGTTATATTCCATAACTGGAACACGCACGGGTACACA
AATTTGTTCAATTTCTTCACTGTTATAATACAGTGAACTATCCCTAATTC
GAACATCTATTATTCGAATCTTTCTGTAATTCGAACTTAAGCATTTGTCC
GCTCAACAGGAAGGTCATATAAAAACACTCTCCGTAATTCGATTCTTTTT
CTTATTCGAAGAAAATTCTTGGCTTCTTGAAGATCGAATTAGAGGGATCA
ACTGTAAATATAAAAGCTTTGAATTCGATTTTTTCTCTCCTGCAGATCAT
TGTGACGAACACAGTTCCCGTTGAAGAAAAGATGAAACAGTGTCCGAAAA
TTAAATCTGTGGACATCAGTGCACTACTGTCCGAAGCTGTCCGCCGTATC
CATAATGGTGAATCGATGTCTTATCTGTTTCGAAACATTTCTTTGGAAGA
TTGAGTATTTTTCTGATCTCTTGCCAAGTCAAGATTTGTATGCTAACCTA
ATAACCAGCTCTAGCTAGACTAGGTTCCAATCATATGAAGAACAAAACTC
GTCTTAAACCAAAACTCTTGACTTTTTCACGATCATAACCTAGTCTAGTC
TAAAATCAAACAAGGCACCATTTCCAATTTGGAAATCAATCTTTGGAGCG
TCATAGAAATGCTGTTTGAATTTTGTTTTGTTGGTTGGTTATTGGTACAT
GTGTATTACTATGGTGTGTTGTAGGTAGAAAATCAAAGGTTTTAGTTTTT
ACATAGTTTTTCCCGTTTCATATCAGACACATTTTTTATATCAGGCTGTC
GTCTCCTATTGTTATGTTATGCTGATATAAGCAAAAAATTATTTTTCTCT
TTCTGACCGATTTTAGTCCACATCCGTGTCAGTCCAATGAGAAAAACTTG
TAAATCAAAATTAATGAGTAAAAAGGTATAACTCTTATTAAAAAGCTAAC
CTTTTTAAAGATTATCCGTAAGGCTTCAGTATTATTCATGTGAAGTCGAA
GTTACAGTCGCCACTTACTAATTCGAACTCAAACGGAAACTGGCTTGTTC
GAATTACAGAAAGTTTCGAATTATAGTAAGTATATAATAAGTGACTATTT
AACAATAGGAAGACATTGTCCTGATATGAAATATGTGTCTGATATGAAAC
GGGAACACTTATGTAAAAGTAATACCTTTAAGAATGCAATAGATAAGCAC
TTATTATTTTTTTATTTCTCAGGTTAGAATATGCTCATTAGGTTTTTGAC
AAAATTTAGGTTCATGTTCTTATATATAGTACTTGCTTGTGTGGTATGCT
GTTCGCTTTTAGTTGTTATGTTTTTTGATTTTTGATAACAAGATTTATAT
ATAATCAAAAACATTTTTTTTATTTTACACTTTATTTTATAAAGGAGATC
TTTCAGACTTGCAAGCACCACATCCAACAAGGGTAAAATATCAGTCAGAG
ATACTCGTTTCGGCTATCGTTTTGACAACTTGATTTATTGAAAGGGTTAA
TAAAACAAAGACTTTTCTTCAGAGATGTTTCGTTGGTCTTTTGTCTGAGC
TGACTTACCGTCGTTTTGTATTGTATAAGATTCCCGTTTCCGCGCTAAGA
TTCTTGTCACTTTTTCGAATTCTTTCCGCTATTTTTCCCGGGATAACCGG
CATGAAATTGGAAAGGGTTTATTTCTAAAGTTACGGAAAATCTTGTGAAA
CTGATTAACTTTCCGTAGCTTTTTTTTCAACTACCCGAAATCCTGGTCTT
TTTCCGCTAGAAAAGTAGCAAGGGGATCTTAATGCGGAAATGGGAATGTT
ATAGAAAATGACTTTAGGTAATGGTGTTAGTCTTGTTTGTCTGAAATTAT
TAAGATTATATGTAGCATATACATTAGATGTTATAAAACCCTAATTACAT
TAAAGAAAATATTTTTCGTTTTCGGCTTTTAAAGCCACTACCGTGTAGGA
TTTGCTAAACTTTCTCATTCCTGGCGCATTACTGGGATCCTTCCACCACT
TTCTCCGGGCATACCGGTAAAAATATTTTTTCTACTGCGTACAATTGTGT
GGACAATACATTGTGTTCCAAGCCCGAAGGGCTAAACTCGAGACTCCTGA
ATGGAAAATGAATCCACTTATTTCTCATCCAGAACGCCCGCGCGTGATTT
CTACACAAACGCCGGGTTGAAACTAAAATCTAAATTTCGCTAAATTTCAA
AAAATGCAGTCTTCAAAAACAAAGGAACCCCTCGATAAAATCCGTCGTCA
TGATTGTGACGCGTTCTGGACGCGTTCTGGATGTGAAATGAGTGGTTTCA
CTTTTTCTTGCCAGGGAAAGGTTAGAGATTCTACTCTAGCCCGTCGTCGG
GCTTTAAACTCAATGGGACAATATACTATAGCCTGTGTATTGCTTACAAG
TTGAAATAACTATCATAGTCTTCTTCCACTGTGAAATAGTAAAAGGAAAG
TTTTGCTGGGAATGAGAAAGTTTAGCTGTCTATACGGTAAGTACTTACAA
ATAGAATTTTATAGTAAAATCTTACGTTGATTTTTAAAATTAATAATCTT
CATTGTTTTGTTTCAATCTTCTGGAGGTACGTTGAATCATGCCAGCCTCG
TTTTCGTACAACATAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015480XLOC_015480Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027475-exon-sc0000628-1575043694:164718..164919TCONS_00027475-exon-sc0000628-1575043694:164718..164919Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:163582..163634TCONS_00027475-exon-sc0000628-1575043694:163582..163634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:163062..163128TCONS_00027475-exon-sc0000628-1575043694:163062..163128Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:161453..161625TCONS_00027475-exon-sc0000628-1575043694:161453..161625Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:160519..160634TCONS_00027475-exon-sc0000628-1575043694:160519..160634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:159641..159696TCONS_00027475-exon-sc0000628-1575043694:159641..159696Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:158777..158949TCONS_00027475-exon-sc0000628-1575043694:158777..158949Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:153829..153899TCONS_00027475-exon-sc0000628-1575043694:153829..153899Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:153073..153219TCONS_00027475-exon-sc0000628-1575043694:153073..153219Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1575043694:150103..152424TCONS_00027475-exon-sc0000628-1575043694:150103..152424Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:164718..164919TCONS_00027475-exon-sc0000628-1510915933:164718..164919Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:163582..163634TCONS_00027475-exon-sc0000628-1510915933:163582..163634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:163062..163128TCONS_00027475-exon-sc0000628-1510915933:163062..163128Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:161453..161625TCONS_00027475-exon-sc0000628-1510915933:161453..161625Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:160519..160634TCONS_00027475-exon-sc0000628-1510915933:160519..160634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:159641..159696TCONS_00027475-exon-sc0000628-1510915933:159641..159696Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:158777..158949TCONS_00027475-exon-sc0000628-1510915933:158777..158949Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:153829..153899TCONS_00027475-exon-sc0000628-1510915933:153829..153899Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:153073..153219TCONS_00027475-exon-sc0000628-1510915933:153073..153219Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1510915933:150103..152424TCONS_00027475-exon-sc0000628-1510915933:150103..152424Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:164718..164919TCONS_00027475-exon-sc0000628-1491911889:164718..164919Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:163582..163634TCONS_00027475-exon-sc0000628-1491911889:163582..163634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:163062..163128TCONS_00027475-exon-sc0000628-1491911889:163062..163128Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:161453..161625TCONS_00027475-exon-sc0000628-1491911889:161453..161625Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:160519..160634TCONS_00027475-exon-sc0000628-1491911889:160519..160634Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:159641..159696TCONS_00027475-exon-sc0000628-1491911889:159641..159696Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:158777..158949TCONS_00027475-exon-sc0000628-1491911889:158777..158949Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:153829..153899TCONS_00027475-exon-sc0000628-1491911889:153829..153899Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:153073..153219TCONS_00027475-exon-sc0000628-1491911889:153073..153219Clytia hemisphaericaexon
TCONS_00027475-exon-sc0000628-1491911889:150103..152424TCONS_00027475-exon-sc0000628-1491911889:150103..152424Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000628supercontigsc0000628:150103..164919 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.92	10.5146	29.7368	30.8079	12.4144	10.0928	15.185	15.2095	17.5466	17.2479	16.6011	14.5287	10.9546	10.3119	17.0834	20.4446	25.9449	24.5337	4.50566	5.46747	18.549	20.8246	18.2968	18.0479	17.4073	20.5775	15.783	8.50751	9.94007	10.4819
Blast
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BLAST of TCONS_00027475 vs. Swiss-Prot (Human)
Match: KPRB (Phosphoribosyl pyrophosphate synthase-associated protein 2 OS=Homo sapiens GN=PRPSAP2 PE=1 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 6.096e-119
Identity = 195/361 (54.02%), Postives = 258/361 (71.47%), Query Frame = 3 
Query:  138 ESNIVIFSPKGSD--LPLAASIASRLGVTLGEMTCGNFANKETEMTISTSVRNRDAYILQVMKDDPNDCIMELLMVCYALKTSCCRKVIGVVPYLPYSKQSKMRNRGSIPAKLMADLLCRAGLDHMLTMDLHSKEVQGFYDCPVDNLRASPFLIQYIQDRIPGYKDAVIVARHPGSAARANAFAERLQLNIAVLHGEHNQEDSEICDGRHSPPPARRSVRQRGFSECANNEMLVSLGLPTKVKKPLSIVGDVNERVCIIVEDIIDDATMLVQSAKILRNEGATSIYVVATHGLFAGDACKIIMESCIDEIIVTNTVPVEEKMKQCPKIKSVDISALLSEAVRRIHNGESMSYLFRNISLED 1214
            +  +V+FS   +   + L+  IA RLGV +G++      N+ET + I  SVR +D +I+Q +  D N  IMELL++ YA KTSC + +IGV+PY PYSKQ KMR RGSI +KL+A ++C+AGL H++TMDLH KE+QGF++ PVDNLRASPFL+QYIQ+ IP Y++AVIVA+ P SA RA +FAERL+L IAV+HGE    +S++ DGRHSPP  R        S  A +  L    L  K K P+++VGDV  R+ IIV+DIIDD    + +A+ L+  GA  I+V+ATHGL + DA + I ES IDE++VTNT+P E +  QCPKIK+VDIS +LSEA+RRIHNGESMSYLFRNI L+D
Sbjct:   17 KGGLVLFSANSNSSCMELSKKIAERLGVEMGKVQVYQEPNRETRVQIQESVRGKDVFIIQTVSKDVNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKMRKRGSIVSKLLASMMCKAGLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDAESDLVDGRHSPPMVR--------SVAAIHPSLEIPMLIPKEKPPITVVGDVGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFVMATHGLLSSDAPRRIEESAIDEVVVTNTIPHEVQKLQCPKIKTVDISMILSEAIRRIHNGESMSYLFRNIGLDD 369
The following BLAST results are available for this feature:
BLAST of TCONS_00027475 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KPRB6.096e-11954.02Phosphoribosyl pyrophosphate synthase-associated p... [more]
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