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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027153 ID=TCONS_00027153|Name=TCONS_00027153|organism=Clytia hemisphaerica|type=transcript|length=1130bp
ACGGTCACACTCTTGCAGAGTATAATCTTTTAGAAGGTGATAAAATCTTG
ATGAAGCAGCGTGTCGTGATACAGCTCACATTCGTGGACACTGGAGAAGT
AACTGTATTTTACGAAATCGTTGAAAGTGATCTGGCATGTAAGAATGTCA
AAAAGTTAATTAAAGAAATCTTGAAGACGCACAAATTGAAGAAGAGTCAG
ATTTTGGAGATGAAAGATATGAACAATGATGTTGTCTTGTCGTTCNTTGA
AGAAGAGTCAGATTTTGGAGATGAAAGATATGAACAATGATGTTGTGTTG
TCGTTAAGTAGTGATCAAAAGTTGTATGAATTTCGTCGATTGCATTTGCG
AATCGATAAATCTCGATCGGATTGTAACGTCATGTAATGAGAATGTTAAA
GACCTGGTATAAATAATACTTACCGGGTACCATGAATAAAGGGCCTGTGG
GTTATTGGGTTTGCGATATTAAGCTATGAAGCTTTATTGgagccaaattt
caaaaattgaccctTTTACAGAGacagaattttgaaaagtttgtccaatt
tttgaagtttttaagaCTCCCTTAGTAGAGAGACTAAGATTTTAGAACCA
TTTGTATAGACTGAAttactttttgatgatttttattcaatttaggGCCA
GAACACGTCACCAGAGCTCACTTTGCGCAACCCCTCCCCCTGGGTTTGAG
GGGCAAGAATTCATTTTTCGTGCAGTGTAGGTGAATATCTTAAGtagaat
tctattgtaaattataaataaaacgcaaatatttttataaagcaAATTAT
TTAACAGGTTGTCAGATATTTTGTTGAGCTATGAGAAACCTATCATGAAG
GGGTGATACTCAACCTAGAGCATAAAATTGTacaaagttattcataaaaa
tcataaattatgATGACTCTGCAAAACAAGGATAAAACTTGATTGTGGGA
AACCATCCTTTCACTGCTTTGGAGAAGTGTAGAGAGCGCCAAATGTAGTT
TAGCCGAGTTAGGTTTACGCGTTCCAATGTTTTCCAAGGTAcaaaaagat
ggttaaaaagTGCATTAATTTTAGCGTTGAATATGAGAATGTAAAGTTTT
Cgcataaatttacaaaaaaaaacatttttt Run BLAST on NCBI transcript from alignment at sc0000607:150171..151300 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027153 ID=TCONS_00027153|Name=TCONS_00027153|organism=Clytia hemisphaerica|type=transcript|length=1130bp|location=Sequence derived from alignment at sc0000607:150171..151300 (Clytia hemisphaerica)
aaaaaatgtttttttttgtaaatttatgcGAAAACTTTACATTCTCATAT
TCAACGCTAAAATTAATGCActttttaaccatctttttgTACCTTGGAAA
ACATTGGAACGCGTAAACCTAACTCGGCTAAACTACATTTGGCGCTCTCT
ACACTTCTCCAAAGCAGTGAAAGGATGGTTTCCCACAATCAAGTTTTATC
CTTGTTTTGCAGAGTCATcataatttatgatttttatgaataactttgtA
CAATTTTATGCTCTAGGTTGAGTATCACCCCTTCATGATAGGTTTCTCAT
AGCTCAACAAAATATCTGACAACCTGTTAAATAATTtgctttataaaaat
atttgcgttttatttataatttacaatagaattctaCTTAAGATATTCAC
CTACACTGCACGAAAAATGAATTCTTGCCCCTCAAACCCAGGGGGAGGGG
TTGCGCAAAGTGAGCTCTGGTGACGTGTTCTGGCcctaaattgaataaaa
atcatcaaaaagtaaTTCAGTCTATACAAATGGTTCTAAAATCTTAGTCT
CTCTACTAAGGGAGtcttaaaaacttcaaaaattggacaaacttttcaaa
attctgtCTCTGTAAAagggtcaatttttgaaatttggctcCAATAAAGC
TTCATAGCTTAATATCGCAAACCCAATAACCCACAGGCCCTTTATTCATG
GTACCCGGTAAGTATTATTTATACCAGGTCTTTAACATTCTCATTACATG
ACGTTACAATCCGATCGAGATTTATCGATTCGCAAATGCAATCGACGAAA
TTCATACAACTTTTGATCACTACTTAACGACAACACAACATCATTGTTCA
TATCTTTCATCTCCAAAATCTGACTCTTCTTCAANGAACGACAAGACAAC
ATCATTGTTCATATCTTTCATCTCCAAAATCTGACTCTTCTTCAATTTGT
GCGTCTTCAAGATTTCTTTAATTAACTTTTTGACATTCTTACATGCCAGA
TCACTTTCAACGATTTCGTAAAATACAGTTACTTCTCCAGTGTCCACGAA
TGTGAGCTGTATCACGACACGCTGCTTCATCAAGATTTTATCACCTTCTA
AAAGATTATACTCTGCAAGAGTGTGACCGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027153-exon-sc0000607-1491911889:150171..151300 | TCONS_00027153-exon-sc0000607-1491911889:150171..151300 | Clytia hemisphaerica | exon |
| TCONS_00027153-exon-sc0000607-1510915933:150171..151300 | TCONS_00027153-exon-sc0000607-1510915933:150171..151300 | Clytia hemisphaerica | exon |
| TCONS_00027153-exon-sc0000607-1575043694:150171..151300 | TCONS_00027153-exon-sc0000607-1575043694:150171..151300 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000607 | supercontig | sc0000607:150171..151300 . |
Blast
The following BLAST results are available for this feature:
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