TCONS_00027045 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027045
Unique NameTCONS_00027045
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1088

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027045 ID=TCONS_00027045|Name=TCONS_00027045|organism=Clytia hemisphaerica|type=transcript|length=1088bp
ATCCTAATTACAAAAACCAAAATAGTAAGTAGTACTTTcagattttcaac
atTTTTGATGGACTAGAAGTTTTTGGTCAGTTTTGGTAAAAACCTATAAC
TTTATAGGGAAAATTTATTTAACTTTGTGAATATTTGGATATTTCGAAGA
ATTCTATTTCATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAA
TGGAAAGGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGAT
TCAGATCAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACC
TTCTACaagtgttttcaaaaagaaGATTGGATCATCTAAAAAGCTATCTT
GTTGTGGGCGTACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTA
CCAATCTTTGTGGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGT
GTTGACTATGGGGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAA
TCAGAGTCAGTTATGctgAAGGTGCAGAAAAAGATTTCAATTCAAAACGT
GATAAATTACGAAAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGA
GAAGAAGAAAGTTCAAATTTACAAAGACCAGATTAATATTTTACAGAACC
AGGTCAGAAGTCTAAACAGTTCAATACAAGAGATACGCAAACAACCCGTA
TTTGATGTCAATTCTGTAAAATCCGACCTCGACAAAATCAAGACCGGAAT
GGCAGACATTGGGTCTTCAATTTCTAAGTTAGAGAACAACCATATCGTGT
TGGAAAAACGAGTCAGTACTTTATCAGCGAAGACACATAAAATACAGAAT
ATATTGACGAATGTGACGTCTGATATGAACAATGGCAACAGAGCGATTCC
GTCATTACGGTCGACCACGGTTAAACCGTTCGTGGTCACACTGACACCTA
ACGAGAACAGCGTGGTCAAATTCAAACAGTTCAAACGTGCCATNGAGATA
CTTAGATAGTACCAGTACTATCAAAAAACCCAAATTTTGAAGATGTTTTG
TTGGGACTAATGAATGATAGACAGGCGAATCACGACTG
Run BLAST on NCBI

protein sequence of TCONS_00027045-protein

>TCONS_00027045-protein ID=TCONS_00027045-protein|Name=TCONS_00027045-protein|organism=Clytia hemisphaerica|type=polypeptide|length=282bp
MGKTVNFDECRLQMERPLKSINLSEDSDDDSDQRQLFELPKRKVKRPSTS
VFKKKIGSSKKLSCCGRTSLCCKVCFSTLVPIFVATFIAFTVIFFIVLTM
GMSGINKELEGLKIRVSYAEGAEKDFNSKRDKLRKDFEDKLSQLDNEKKK
VQIYKDQINILQNQVRSLNSSIQEIRKQPVFDVNSVKSDLDKIKTGMADI
GSSISKLENNHIVLEKRVSTLSAKTHKIQNILTNVTSDMNNGNRAIPSLR
STTVKPFVVTLTPNENSVVKFKQFKRAXEILR
Run BLAST on NCBI

transcript from alignment at sc0000601:190484..203414-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027045 ID=TCONS_00027045|Name=TCONS_00027045|organism=Clytia hemisphaerica|type=transcript|length=12931bp|location=Sequence derived from alignment at sc0000601:190484..203414- (Clytia hemisphaerica)
ATCCTAATTACAAAAACCAAAATAGTAAGTAGTACTTTCAGATTTTCAAC ATTTTTGATAGTCTACACAGTAGACAGATCCAGGCTTTTAGGCCTTACTC TTGGTCTATAGGCACTGCTATAGGCGGCCACTAGTGACCCCCACCGGGAA TTGCTTATTAATAGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNAACTCTCTATTGTTTCATTAAAACCTCAG TGCGCATGCGATTTATCTGGAGAATTTCAATATTCAAAACAAGAGCAGTG CTCATAGCCCGAAGAGTAGGAGTTTTATGCTCGAAACGAAGGAAGATATG ACGTAGCCTACATTTTTGATGGACTAGAAGTTTTTGGTCAGTTTTGGTAA AAACCTATAACTTTATAGGGAAAATTTATTTAACTTTGTGAATATTTGGA TATTTCGAAGAATTCTATTTCATGGGTAAGACAGTAAATTTTGATGAATG CAGATTACAAATGGAAAGGCCATTGAAGTCAATAAATCTATCAGAGGATA GCGATGATGATTCAGATCAGAGACAGTTATTTGAACTACCAAAGCGTAAG GTTAAAAGACCTTCTACAAGTGTTTTCAAAAAGAAGATTGGATCATCTAA AAAGCTATCTTGGTTAGTAGGAAATATTTGGTTCTGGTAATGTTCCATTA AATTTCTGTTTTCTTGTGTCCTGTGGGGGGTTTTTTCGTTTCATTTTTTG TTTGGTTTGTTTGTNGTTCTTGTGTCCTGTGGGGGTTTTTTTCGTTTCAT TTTTTGTTTGGTTTGTTTGTTTAGTTTGTGTTTGTGAAATATTGCAGTTT TAAAAGGCCTTGTTAATCACATGTTGTGTTCACTATTTATTAACTCCAGC ATGAAAGCAAACACATTGATGCGTTTATAGTACAAAGTGAGTACTGCCAT CCATATCTTCATCATGTCATTGTTGTTTTTGGATGCTTTCCAAATATTCA ACCCTGACATTTTGATTTTAAGAAAAGTTATATATAATTTAACTGCATAA AAATAAAGATTGTGTTTAAGTCAGTATCTTAAAACCTAGTGCTAACAGCT TTCGGAATGGTTACCTTTTATTTCAAGAAATGAAAACTAAGGCCATGCCA GAAAATTTTTGTAACCCCTGTCAGACGACGAACCCTAAAGTTGGTCTAAT ATTGACATCCCTCGTCTAATAGACCTTTTTCAAAGAGGACGTCCTGTTGA ATAATTATGTAGTCCAGCCATAAAAACAATGATAGAGCCATGCATAATTA CTGTATCATGCATATTGTAATAATTATGCATGGTTTTATCATTGTTTTTC TGCTGTCGACTACATAATTATTCAACAGGGTGGCCTCTTTGAAAAAAGGT CTATTCCAACACACTTGTTTAGAGACAGGAATGATATGAAAGCTTGAATC ATTGATTGAAAAAGGATTATTCCTCTGTGACCACTAAGCCAAGAAAAAAA GTTTCAACCTATCAATTTCAGCCGGTTAGTGTAAAACACAGGTCACAGGT CACAGGTCCTGGGTCACGGGTCACAGGTCACAGGTCACAGGTCATACAAA TTACAGACCGGAAAACTCAGTGTAGCTGGAACCTCGATATTCCAGGATTA GAAAAAGCTATACCTGTTATCTTTTTTCTTTAAAGAGTCAACAAGCCATC AACATCGATAAATTACACACATTTCCTCAGAAACTTTTAAAATTATCTGC CCGTATGACTTTCTTAAAGCCGTTCCAAAGTTAACCAATCGAGTTATGTA TCGGAATTCCTATGGGAGTTCTTTTCTGAGATTTGTAAGATAGCTAAGTC GGCAATAAAACTATTCCCAGGCAGTTACATCAAAATGCCTCGAAAATGTC AATATGAAAATTGCGTAATCAGAGAACGTATGTCTCGCTCATTATAAAAA GGCAGAGACANCCTCTGACGTAATTGTAAAATTTATGTGATGGGAGTTTG AGATAGTAATTTCGACTGGATTTATTCAGGTTGATTTTTTATGACTTCTA ATGGTACTTTTTCTAACAAGTTTGATTACTCTGTTCTCACACTTATGTCC TTTTTTTTGCGTCCTTTTCCATGATTACTTTTATTTATATTTTTAAAGAC AGGTAAGAAGGCATATTGATGTAACTGCCAGGGGTTTGAGGAATAAGCAG CACTGTCATCATTTGTTTTTTATTTAACCATATATTTAAATTTGCGCTCA AAAATACTTAAATAAATGAGTTAATAATATTCAATATACTTTTTGTATCT CTCAGAAAAAAAAACACTTACAGAACGACATAGTTTATCATTTGGAATAC CCTCGTGTTTGGACCATTCTATCGTGGGCGCAAAATAGGGCGGAAACTAA GTAGCACTCTCAGTGCAAGATTGCCGCCTCATCTTTATTCGTCCGCGCGA GAACGCAAGCTAATCATTTTTTTCTCGCGAGCTCAAGGGGAAAAGGAAAG TGAACGATATTCTTGAAGGAAAACGTCAGAAACGAACCCAAAGACCAAGT ATTTTGTTGTTGAGAATCAATCCTGTGAAGATATAAAAATTTCTGCTATG CGTTTTTTTCGGAATGCTGAAAAACTCTAATTTTGATCTTCCTTAAGGTA AAAGGGTTGCGAGATTTGGGTTAGCGAGGCAAAAATTGCTAAAAAGCTGG TAAAATCGTAATCGTCAAAAATCGAAGTTCCAGCCTCACTGAAACTGTAA TGCACTCATAACATACAGCTCATAACATAAGTTCCTGAAAATATTATATG TAATGGAAATGTAATATCAAAATATGTTATTTAGAGGACTTAAACAACAA ATCATCAACCCAAAATATTGACAACAAATGACACTTAAATTATGTAAATA ATGACGTTATCTCAAAGTATGAGGTTTTGTCCACCAATTTAACAACAAAA TATTTTTCATGCATAATAGGATGCTGACGCTGCAAGTGGATATATATTGA CAGGTTTACAATAATTCTTTGTATATAACATACGTAACATGCATATAACA TTGAAAAGATAATTTTTATTACATGTGTGAGGTGTAATATATAATACAAG TATTACAGGTCCGTGTTATACACTGCATAAAACCCGAAAGCACGTGGTAA GCACGTGGATAGATTTTTGGATTTAAAAATAGTTCTAGATCAATAAATTA CCTTTGGAATTACATTTTTGACATTAGCAACTGTTTTTAAAACATTTTCT TTGTGTTTTACAGTACTTGTAGCTGACCTGTCAACACTGACCTGTGACCC GTGACCTGTGACCTGCATTTTTAACCGAATTTCAGCTGATAAAAAGAGTG CTGGAATGTCGATATTAGACCAAGTTACGGTATATTTTCAATTTTTTCTA GCCTCGGAAATAATTTTTTTTCCAGTGGTGGTTGGAAATTCCAATGAAAA TCCATGTATATACTTTTGAAAAATCTGATGGCGTTAATAGGCTATCACTT ATAAGACAGCGCTTCAAGTGTAAGGCGCTGAAAAGCCATCGGTTGCTGTT GGGTGTTTTGTTGGATGCTGAAATTTCTAAATTCCGAAAACACTCTATAT ACAATCAGTGCATCCGATAAGCCAGGAGCTCAAATTCCTGACACCCAACA CCACAGGTCTGTACCTGGCATTTGGCGGCTTTACACCCTTTACTTTTTCC AGCCATCTTCTCCAATGCCTTGGGCGTCAGTCAAATGATATGTACTAAAT GATATGTACTTCATTGGCCGTTATAGGCGCTATTTTAGTTAGGGAAAAAA TTTGGGCAAAAAACGCTATAAAAAGAGGCAAACGTAATTTTTTTGTGAGT GCGGTTATGATTTTTTTATTGCGGCTGCGTACATCAGGAACTCGCCAAAT GTTCTTAACTGTATTTTTCGTCACTGGCAATCAGAACTATCTGGGGTTTT GTAGATGTTGGGTTGGCAGGCAACATCGTCCACCCCTTATTTCCCCCCTA TTTTCTACTTTCCTATCTTCTATCATGGTTTCAAATTTTCTCAAGTGTTT CTAACTGTTTTCTTAGTATTTTTCTGAAATTCGGTCGGTCGTACCTGTGA AATGGGCCTCCTCCCTTGGCTCGAACGACCAAATGCAACCAAACCAAAAG CTTGGTTTAAAAACCCAATGCGTAACCGCTTGCCATCGAGACACAGCAGT ATGCTGTCATTCACAAATACAGTAGGGTCCCAAAATTACTAGAGCATATA ATTACATGAAAACCAGAGCATGTATCTTCAACAGAAATCAAAACGATTAG TAGAGGGCATTTTGTAAAATCGCTCGACTGTTTTGTTAGAAGCACTTGTT ANAAAGTGCACTCAAAAACATCACTTTAGCTTAAGTGCTTGCGCACATTG GGTACAAAGTTCGATATGTGTTCCGGTAGATTTTGTATAAAGTGTTAGAG CTACACTGTTAGTCGTCAAGCGTTATCATAAAATTATCATTGGGTCAAAT TTTTTTAAAAGACTGTCGACAATAGAGTGACTAGTTCAGAAGCACTGAAT GGAAGAGACACTTGAGATCATTTATTGCAGATTTCGACATAAACATGCAT AGAGAATAATTTTTTCATTGTGTTTATGTCAGCTTATGAAAGCTTGCATT GGGAAAGAGAAAATGGGTAATCTAGCTTAGCCAATTGCCAGATGTCAGAG AGTAAAAAAGGGTCCAGTATATAGCCCTGGTAGGGGTTAGAGCGAAAAAT TTTGAAAATGTAATTAAAATTATATAGACATTTTTGTTACATTTTGCTAG AAAAGATATTTTTTTGGATTGAGTATTTTGGCCGGTATACGCATTTAGAA AAGTGTTTAGAAGGATTATGTTGAGCCCAATTTGACCAATCAGTTAAGAA AGAGAATGCCTGAGCTTAAAATAAAAATTTAAAAATTAAATTATTAGCAA GTTTTTAAATTTCAAAATTAAAAAAAGGGTTTTATTTGTCTACCATGAAA AATTGACTAACTGCTTCTTGTTATTGTATTTTATCAGGTTCATTTTTGAT GAAATAAAAGGTTTTATTTACTTGCCGTTGGTAATAAATTATACAAATGT TGTTTGCCCTACAGCAAAACAAAACACTTCGATTATCTTATAATTATCTT AAAAATATCGTCTTTAAAGATGATTTTATCAATCTCAGGACAAAATTTAA ACCGCTAAACCTTGTATTATCAATGTTTCTTCATAACTTTATAATTTGTG GAGATGGAACTGTCATTTTAAGTAAGATTCCAAGATTCCGGACTAATATT TTAGTTTACTAACTTTCCTGACATATCTAGCTGAAGATTCTGGAGCGTTT TCTCTAAAAAAAATAGTTTTGATCTTAGATTTGTTTGTAAATGATGTTAT CGAGAATTTTCTTAGACAGCTCTGAAGAAATGAACGAATTAAAATGAAAT TTAATAAAATGATTCGAATTGATATTGGGTGCAGAAATTCTTTCTTGACA ATATTATTAAATTCTTAATTTTATAGTTGTGGGCGTACAAGTCTATGTTG CAAAGTATGTTTCTCAACTTTGGTACCAATCTTTGTGGCGACGTTCATTG CTTTCACCGTTATCTTTTTCATTGTGTTGACTATGGGGATGTCTGGTATC AATAAAGAATTGGAAGGTCTGAAAATCAGAGTCAGTTATGGTAAGAGCGT TTTTATTGTTATTTTTTCTTTGTTTGATTAGCTTTATTGGCTTGTTGTAT GAGAGAGGGTGACTTTTGATTTTTGGACCTACCTGGAGGTCCTTTAAGTT CACCTTTTTGTCTTGCCCGTCAGTTCGTTCGTTACCAGCTTTTCTGAAGT TTTAGGTTAATTCGAAATCACATCAACGAGTATCATTTCAAACTAAAGAT CTTAGCTGTCAAAAGGTCATTTCGTTTTGAGGTTTCAAAATTTTAGGATA TTGGATAAACCCTTTCGTTAAAAGATCGTCTGCATCGCTTTTTAAAGGGG ATTTAGTTTGAGTAAACCAGGTCCAATGGACACCAAATGGATAAGATCGC GACACCCTAGTGGCATACTCAGATTCACTATGCAATGTATCATCTACTGT CGCAGCTTTTCTAATTCAGATTTATTTTCGCTGGCGAAATCCCATTAATC CCATTATTATGTTTGGATTGGTTGATAAGTACATTGAAACAACAGGAAAT CGGGACGCATTTTTTTAGGTTTACGTGAATATAATTATAAAAATCATCTG TAATTCTTTTTAATCGACCGTGATTTGCCAACACTCCAAGCCAAGATTAC CTGAAGATTTCATATCCAAGGTTTCTCTCTTATTCTGATTCTTAATAAAT TTTAACGTGCGCTTAAAAACGCGTGCGAAAAAAATTATGTCAATTTTCAA ACTTTCAAATTGACCTTGTTCAGGCCTCATTGTCAAGATCTTTAAGAAAT TATCACCAAAAGATTAATTTACCGTCCTTTGTTGTGAACTCTGTTTCAAG CACAGATTTGTCGGGTTATCGACTATAGACCGTTCTTTTTGGTAAAGAAT CTATTTTCATAGATTAAGTTGACTGTGCAAAAACATGAAGTTCATATTAC ACACATACTGTTTGTCACAGTTTCTCAGTAGGTCACAATAGAATTTGAAC CACTGTTCAAATGGCTCAACGTACTTGAATGTCTAATAAAAATCTTCATC CTGCTGATTGACAAAGTCTCAAATATCTCATTTCTCAGGTTTTGAAAAGT GTTATGTAATTATTATTGTTGTTTGAAAGGCAACCGTATTTTCAAATTTG CAATAAATGGTTTTCGATGTTCACTAGAATTCCTTGCCCCAGGAAAATTT AACTGTCAATTTTTTTTGTGCCTTAAACCGACGAGTGGCAGTCATTAGAC TAGAGTAACCTTAATCAGCTCTTGATTGGCACGGCTACTTAGTTTACTTC AGCTTGTTATAAATTGATGAAAATTCAAAAATGCTTTTTAAGTGAGTTTG TAGCCAATCTTTCCTCCAATCTAAGATAGACTTGTAGCAATGCCAAAAGT TATGGCGGTTGAAAAAAAAAGTCGTCATGCTTGCTTTTTAACTTCCTCTT CCGCCACAAAAAAATGCAAACAAAGTAAATTAAACGTTGCAGTGTAAAAC AGGCCTTATACGATAGCATTGAAAGGAATACATTGATTATGATTGTATTG AAAGCCGTGTACGGACAGGAAACTCATCAGAATATTGTTAATGCCAAGTA ATTGTGTACGAAAGCTATTATTGTGATTTAATGATGTACACGTTGTTGTT TTTTTAATAAGAACATGAAATTTCTATTCAATATTTCTGGTATTCTTTAT AAAATGCCTTTAAAAATGTTGTTATTTTCAGCTATTTGTGAATATTTTAG TATAATTCTCTAAGAAATTGCATAGTTTAGAGCCCGAAAAGCCTTAAAAT GGTCTTATATTGTTCTCATAGTTTTGGCTTCGAAGCGCTATGTTCTTAAA TGCTTTGTTCTTCCGAGATGAATTGGCATTTATTGATATTCCTTTGTTAA TTGTTCGTAAGAAGTCCACTGACCACAAAAGCACATGTGAACTTTCGACC GCGTGTATGTTTGCTTAGGCGAGCAAAATTTACAGAAGAATATGGGTCAA TCGGTCAGTATAATAAAAGTAAATTGCTTAAAATCTAGGATCGATAGGCC AAGATCTAAAAAAATGTGTGACGTTTTGAACCAGTAGACATTTTGTCTCT TTATGAATGAGTAGAGTGGAGTCGTACATGCGTTATATGATAATACGATT ATTTTTACGGGATTTAGTTTGTATAAACGACTGGAAGAATCCGGTATTCC GGCCTTATAAAATCCCCGGCTAGCTACGCAGAAACTTGCGTAACGAGAAA ACAATTTATCAAACAACAACAAACTCTCAAAACAAAATCAACTCAAATGA AACATTTTTAACACACAAATCAACACACATTTTTGTTTTCAAGAATTTTT TTTGAGCGGGAAAATATTTAATTTCAATATTGACACTTTTCTTTTGTATT ACACAAAGGTTTCTAGACGACTAAAATTGTTTCCTCCATTACTTTTTGCT TTATTTTTACAATGTCTGAATTAGTCGTCTAGTTTGCTAGACTATGGATG AGCGACTTTCGTGCCATTTCCATCGTGATATTATATACATCGTTAAATTC TTAAAGCAAATTTGACGCAAAGTTGACATGTCACCAAAATTGCCGTCCAC TTTCCTGCTCAACGACGATAAAAAACACCAAAATACCCGTCGTCTTTTTA GATTCATTATTCGTAACGTCCATGTGATGCCTTCGATCATATTGATTTCA CATTTTGNTCTGTGAGATTGCACTGCAAGGGTCGAATTTTAAAACAAATT CAAAATAATTGTTAGAAAGAAAGGTTTATACTTCTTGTTTGTTTGAAAAA GTTTCTATTGTCTGATAATTACAGCTGACAAGAATAATTTTCCCAGTTTT TCTTTGAAACAGGAAATTCCCCAAGCTTTTTCTTTCACGTAGATTTACAG CTGAGAAATATAGTGCACTATAAGGGTTGGGTAAATCAAGAGAAAATGCA CTGAAAGGGTACCTTTTCAGGCATATTGAACTGCACTGTAAGGGTACGAT TTTGAAAAGCAGGTTTTGCGCGGCACATACCGTCGTTTATAAATCGAGTG GCCCCCCCGGGAGCTTGCTAGACTGTGGATGAGCGACTTTCGTGCCATTT CCATCGTGATATTATATACATCGTTAAATTCTTAAAGCAAATTTGACGCA AAGTTGACATGTCACCAAAATTGCCGTCCACTTTCCTGCTCAACGACGAT AAAAAACACCAAAATACCCGTCGTCTTTTTAGATTCATTATTCGTAACGT CCATGTGATGCCTTCGATCATATTGATTTCACATTTTGGTGCATTGATCT TTATAGATTACGCATAACTCGTTCCTTATATTTTTTTATCAAAGAAAGTT ACTTCANTCATGTGATGCCTTTGATCATATTGATTTCACATTTTGGTGCA TTGATCTTTATAGATTACCCATAACTCATTCCTTATATTTTTATCAAAGA AAGTTACTTCAATGGTTTGTTCTTGTCATCATTTTTCCAAATACGCTCAT TTGCTGTTTTAAAATCTTTTGAAAATAAAGTTGAATCTCTAAATTTTAGA CCTGCACATATGGAACACAAATATGTTGGAGTGAGTCCCGAGGGGGGTGG GGTATGTGTGGACATTAAGGGTTGTTTTTTTTTCACCTTTTGAAGTCTCT CTAAGGGTCGCAAAAATTAGAAAAATTCAAACAAGTCTCTCTAAGGGTAG GAAAATTAAAGATTTGTAGAAAATTTCTTTAATTTAGAGTGAAAAAGTTG TAAAAACGTCCCCCTAAGGGTAGAAAACTTTTCATAGATCAAAGAAAATT TTTCAAAAAAGTCTCTTTAAGGGTCACTTTTTCAGCAAAAGGGTCGGTTT TTTGAGGTCCCATCTGCACATAACCGTCATTATCGCCAACCCTAGTACCC CCCCCCCCGGGGGGGGGGGGAAATTTTNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCGGGGA GTGAGTGAAATTTTGAGTTAAGGTATTGTTAACTGAAGGGACGAGAAAAC TTGTCCAGGTTGTAGAGTTGTAACTTTATGTTTCTCATCGTTTCCAAAGA TATTTGTGATGAGTTTATTAACTTTTTAGGTATTACATTCACGCACTTCT TTTTCTTCACCTTCAAAGATCCCCTGCATGGGATATCTATTTCTTAACGC TTTTCTTATTGTGTCTGTTCTTTGTACGATGGACTATATTTCTTTTACCA TCATAATGTAGTCCTGAAACTTTGAAGGACCCTGCCGACGCACCGGACTT AACGAGCACCGGACTTAACGAGCACCGGACACGCGAAAGTCCGGTGTAAA ATTAGAATTTTTTTTACCACCGGACAACTTCTACACCGGGCTTAAGGAAG TCGGATGTCCGGTGTCGGAGAAGGATATTTTTTCCCACCGGACAATCAAA ACAACGGACATGACCAGTCCGGTGCATCCGGTGTTTCTNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNTAATTTTTTGTTTCATAAATGTCCGGCGTCCAAAAT TCCCTGTATGCAACACCGGACTGACACCAGACTTATTGCGTCCGGTGTAG CGAGAGGATACTTTTGCCACCGGACAAATACCCCGGACAGTCAGGGTCCT AACTTTGATTGCTTTGATCTGTAAAGTACCACCCATACAAGTTATCATTT TTATTTGTGTTATGTTATGATTCGTGTTCATGCAAAATCTCTAGCTCATA CTATATAAAATAGTTATTGAAAAATTGTAATTTTGGTGATTTTCGGACAT TGTCTATTCTGGTCTGTAAAATACCAACCAACTTTTTGGCGATTTTGCAA ATCATCTCCAATTATCCAATCTACCATTGTTCCAATTTTCATAGTCATAT CACTTGTCAATTATGAGGATGTCCCCAAACCACACCCTCAAGATGCTTCC TAGTTATAAGAAGGCGCTTAAAGGGTTACAAACTTACATTTCCAACATAG ATTTTTTTTTAGTTCTTGGCTCAATCCACGGGCTGCGAGGGTTTTTTGCA ACAGAAGTTTTCTCTGATGTAATATCGTATAGTTTTGTAAGTGAACAAAA AAGTAAAATCAACACAGTTTGTTTTTTACGATATTTCGTTCTATTTTCTA ATATCGTATAGTTTTGTAATATAGATTCATTTTTTTTTCAGCTGAAGGTG CAGAAAAAGATTTCAATTCAAAACGTGATAAATTACGAAAAGATTTCGAA GACAAACTTTCTCAACTGGATAATGAGAAGAAGAAAGTTCAAATTTACAA AGACCAGATTAATATTTTACAGAACCAGGTTAGTCGATGTATTTTTCCGA ACAACGTTAAAGCTAAAAAGATACCCATCAAATTTCCATTTACCCTTAAA AACATTTGTGAATAGATCCCATTGTAGAGCATTCGGCTACGGTGCGCACC ATTAACCGGTTCAGACTTTGTACTTAGTAAAAATGGTACTTAAGGCCTCT CTGCTTGACGCTCGGCAATAAGAGAATTGTCTATGATGAGTGAAGCGATA AAGTGTTAAATGATCGGGTAGATAGCTATCGAAAGAGGAGCCATTGTATC GCCTCCGACTGCGTTTTATAATATTGAAGCTGAAAATCTTGTTTCTCTTC ACCCAACAATTTTTCATATTTATTTGTGACTCAGCTGCAAACAAAGCACC TAACAGAAGTCCGTAATCGAACACAGTTTTAAGAATTCAATGTTTCCGCG TTGTATTTTTGAATTCAACTACAGTATGTAATGCCCGAAAAAACTTTGTA TTTACGTCATTTTATCGGAAAGAAGACCACCCAAACGCCCCCGCCCCTTT CATAAATTTGGTTACCTTATTACACGAATATTGCTAGTCATTTTGTTAAC ACGAATTGAAAAATTTCGTGTTGATAAAAACCCCCTTAATTAAAACCAGC TGTTTCCTTGAAAAAGCAGAATGTTAATTTTAGATCGTGCAAATTTCAAG GCCGTTAAATACTTGTCTAGTAATATTCGTGTAATAAGGTATTTAATACA TTCTCCAAATTCATTACAGGTCAGAAGTCTAAACAGTTCAATACAAGAGA TACGCAAACAACCCGTATTTGATGTCAATTCTGTAAAATCCGACCTCGAC AAAATCAAGACCGGAATGGCAGACATTGGGTCTTCAATTTCTAAGTTAGA GAACAACCATATCGTGTTGGAAAAACGAGTCAGTACTTTATCAGCGAAGA CACATAAAATACAGAATATATTGACGAATGTGACGGTACATATTACTTAA ACTCTATTTTTATCTGTTGAGGCTGCTAGATACGCGAAAGAGTCAATTTG TAGTAGTGTAATACGTCATTTTCGTGTTTCGGAATATTTCGTCTCGTAGT GATTTGGAACAGTAAACGTGTAAACATGGTCTACATGACCAAAGAATCAT CGAAGTATAAACGATTCAATGAAATTGACGCTGTTTTATTGCGAAACAAC CGGGTGTCCCAGAAGAAATTCCCTTCAAAGAGGGGAGGGCGGCTTTGTTC TTGGGCACCCACTAATTTTTCATGGTTGACACCTACTTTTTGACAAAAAT GTATTCATTTTTCTTTGAGATTTTGAGGTTTTAATAAGAGTTGTATTTTT TTGGGAAGACACCGCGAACCACACAAATTAGTTAAGTTGAAAATTAATTC CTTCAAGGGTAAATAAATACTTTACTAATATTATGTCCAAACTTTTTGTT TTCTTTCACAGTCTGATATGAACAATGGCAACAGAGCGATTCCGTCATTA CGGTCGACCACGGTTAAACCGTTCGTGGTCACACTGACACCTAACGAGAA CAGCGTGGTCAAATTCAAACAGTTCAAACGTGCCATNGAGATACTTAGAT AGTACCAGTACTATCAAAAAACCCAAATTTTGAAGATGTTTTGTTGGGAC TAATGAATGATAGACAGGCGAATCACGACTG

Coding sequence (CDS) from alignment at sc0000601:190484..203414-

>TCONS_00027045 ID=TCONS_00027045|Name=TCONS_00027045|organism=Clytia hemisphaerica|type=CDS|length=4245bp|location=Sequence derived from alignment at sc0000601:190484..203414- (Clytia hemisphaerica)
TCTGATATGAACAATGGCAACAGAGCGATTCCGTCATTACGGTCGACCAC
GGTTAAACCGTTCGTGGTCACACTGACACCTAACGAGAACAGCGTGGTCA
AATTCAAACAGTTCAAACGTGCCATNGAGATACTTAGATAGGTCAGAAGT
CTAAACAGTTCAATACAAGAGATACGCAAACAACCCGTATTTGATGTCAA
TTCTGTAAAATCCGACCTCGACAAAATCAAGACCGGAATGGCAGACATTG
GGTCTTCAATTTCTAAGTTAGAGAACAACCATATCGTGTTGGAAAAACGA
GTCAGTACTTTATCAGCGAAGACACATAAAATACAGAATATATTGACGAA
TGTGACGCTGAAGGTGCAGAAAAAGATTTCAATTCAAAACGTGATAAATT
ACGAAAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGAGAAGAAGA
AAGTTCAAATTTACAAAGACCAGATTAATATTTTACAGAACCAGTTGTGG
GCGTACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTACCAATCT
TTGTGGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGTGTTGACT
ATGGGGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAATCAGAGT
CAGTTATGATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAATG
GAAAGGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGATTC
AGATCAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACCTT
CTACAAGTGTTTTCAAAAAGAAGATTGGATCATCTAAAAAGCTATCTTGT
CTGATATGAACAATGGCAACAGAGCGATTCCGTCATTACGGTCGACCACG
GTTAAACCGTTCGTGGTCACACTGACACCTAACGAGAACAGCGTGGTCAA
ATTCAAACAGTTCAAACGTGCCATNGAGATACTTAGATAGGTCAGAAGTC
TAAACAGTTCAATACAAGAGATACGCAAACAACCCGTATTTGATGTCAAT
TCTGTAAAATCCGACCTCGACAAAATCAAGACCGGAATGGCAGACATTGG
GTCTTCAATTTCTAAGTTAGAGAACAACCATATCGTGTTGGAAAAACGAG
TCAGTACTTTATCAGCGAAGACACATAAAATACAGAATATATTGACGAAT
GTGACGCTGAAGGTGCAGAAAAAGATTTCAATTCAAAACGTGATAAATTA
CGAAAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGAGAAGAAGAA
AGTTCAAATTTACAAAGACCAGATTAATATTTTACAGAACCAGTTGTGGG
CGTACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTACCAATCTT
TGTGGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGTGTTGACTA
TGGGGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAATCAGAGTC
AGTTATGATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAATGG
AAAGGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGATTCA
GATCAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACCTTC
TACAAGTGTTTTCAAAAAGAAGATTGGATCATCTAAAAAGCTATCTTGTC
TGATATGAACAATGGCAACAGAGCGATTCCGTCATTACGGTCGACCACGG
TTAAACCGTTCGTGGTCACACTGACACCTAACGAGAACAGCGTGGTCAAA
TTCAAACAGTTCAAACGTGCCATNGAGATACTTAGATAGGTCAGAAGTCT
AAACAGTTCAATACAAGAGATACGCAAACAACCCGTATTTGATGTCAATT
CTGTAAAATCCGACCTCGACAAAATCAAGACCGGAATGGCAGACATTGGG
TCTTCAATTTCTAAGTTAGAGAACAACCATATCGTGTTGGAAAAACGAGT
CAGTACTTTATCAGCGAAGACACATAAAATACAGAATATATTGACGAATG
TGACGCTGAAGGTGCAGAAAAAGATTTCAATTCAAAACGTGATAAATTAC
GAAAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGAGAAGAAGAAA
GTTCAAATTTACAAAGACCAGATTAATATTTTACAGAACCAGTTGTGGGC
GTACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTACCAATCTTT
GTGGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGTGTTGACTAT
GGGGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAATCAGAGTCA
GTTATGATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAATGGA
AAGGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGATTCAG
ATCAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACCTTCT
ACAAGTGTTTTCAAAAAGAAGATTGGATCATCTAAAAAGCTATCTTGTCT
GATATGAACAATGGCAACAGAGCGATTCCGTCATTACGGTCGACCACGGT
TAAACCGTTCGTGGTCACACTGACACCTAACGAGAACAGCGTGGTCAAAT
TCAAACAGTTCAAACGTGCCATNGAGATACTTAGATAGGTCAGAAGTCTA
AACAGTTCAATACAAGAGATACGCAAACAACCCGTATTTGATGTCAATTC
TGTAAAATCCGACCTCGACAAAATCAAGACCGGAATGGCAGACATTGGGT
CTTCAATTTCTAAGTTAGAGAACAACCATATCGTGTTGGAAAAACGAGTC
AGTACTTTATCAGCGAAGACACATAAAATACAGAATATATTGACGAATGT
GACGCTGAAGGTGCAGAAAAAGATTTCAATTCAAAACGTGATAAATTACG
AAAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGAGAAGAAGAAAG
TTCAAATTTACAAAGACCAGATTAATATTTTACAGAACCAGTTGTGGGCG
TACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTACCAATCTTTG
TGGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGTGTTGACTATG
GGGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAATCAGAGTCAG
TTATGATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAATGGAA
AGGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGATTCAGA
TCAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACCTTCTA
CAAGTGTTTTCAAAAAGAAGATTGGATCATCTAAAAAGCTATCTTGTCTG
ATATGAACAATGGCAACAGAGCGATTCCGTCATTACGGTCGACCACGGTT
AAACCGTTCGTGGTCACACTGACACCTAACGAGAACAGCGTGGTCAAATT
CAAACAGTTCAAACGTGCCATNGAGATACTTAGATAGGTCAGAAGTCTAA
ACAGTTCAATACAAGAGATACGCAAACAACCCGTATTTGATGTCAATTCT
GTAAAATCCGACCTCGACAAAATCAAGACCGGAATGGCAGACATTGGGTC
TTCAATTTCTAAGTTAGAGAACAACCATATCGTGTTGGAAAAACGAGTCA
GTACTTTATCAGCGAAGACACATAAAATACAGAATATATTGACGAATGTG
ACGCTGAAGGTGCAGAAAAAGATTTCAATTCAAAACGTGATAAATTACGA
AAAGATTTCGAAGACAAACTTTCTCAACTGGATAATGAGAAGAAGAAAGT
TCAAATTTACAAAGACCAGATTAATATTTTACAGAACCAGTTGTGGGCGT
ACAAGTCTATGTTGCAAAGTATGTTTCTCAACTTTGGTACCAATCTTTGT
GGCGACGTTCATTGCTTTCACCGTTATCTTTTTCATTGTGTTGACTATGG
GGATGTCTGGTATCAATAAAGAATTGGAAGGTCTGAAAATCAGAGTCAGT
TATGATGGGTAAGACAGTAAATTTTGATGAATGCAGATTACAAATGGAAA
GGCCATTGAAGTCAATAAATCTATCAGAGGATAGCGATGATGATTCAGAT
CAGAGACAGTTATTTGAACTACCAAAGCGTAAGGTTAAAAGACCTTCTAC
AAGTGTTTTCAAAAAGAAGATTGGATCATCTAAAAAGCTATCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015193XLOC_015193Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027045-exon-sc0000601-1575043694:203365..203414TCONS_00027045-exon-sc0000601-1575043694:203365..203414Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1575043694:202603..202903TCONS_00027045-exon-sc0000601-1575043694:202603..202903Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1575043694:197575..197738TCONS_00027045-exon-sc0000601-1575043694:197575..197738Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1575043694:192137..192273TCONS_00027045-exon-sc0000601-1575043694:192137..192273Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1575043694:191180..191395TCONS_00027045-exon-sc0000601-1575043694:191180..191395Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1575043694:190484..190703TCONS_00027045-exon-sc0000601-1575043694:190484..190703Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:203365..203414TCONS_00027045-exon-sc0000601-1510915933:203365..203414Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:202603..202903TCONS_00027045-exon-sc0000601-1510915933:202603..202903Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:197575..197738TCONS_00027045-exon-sc0000601-1510915933:197575..197738Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:192137..192273TCONS_00027045-exon-sc0000601-1510915933:192137..192273Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:191180..191395TCONS_00027045-exon-sc0000601-1510915933:191180..191395Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1510915933:190484..190703TCONS_00027045-exon-sc0000601-1510915933:190484..190703Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:203365..203414TCONS_00027045-exon-sc0000601-1491911889:203365..203414Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:202603..202903TCONS_00027045-exon-sc0000601-1491911889:202603..202903Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:197575..197738TCONS_00027045-exon-sc0000601-1491911889:197575..197738Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:192137..192273TCONS_00027045-exon-sc0000601-1491911889:192137..192273Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:191180..191395TCONS_00027045-exon-sc0000601-1491911889:191180..191395Clytia hemisphaericaexon
TCONS_00027045-exon-sc0000601-1491911889:190484..190703TCONS_00027045-exon-sc0000601-1491911889:190484..190703Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027045-proteinTCONS_00027045-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000601supercontigsc0000601:190484..203414 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
22.3603 18.3806 8.81997 8.49484 21.5542 14.7098 18.7327 19.6748 16.9379 16.2197 21.6725 10.1608 14.1195 12.4888 10.0613 17.0936 11.3016 14.8757 13.2148 15.714 16.9363 15.8176 31.1449 33.6164 17.3337 18.9894 13.9466 10.2181 20.9207 23.4601
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027045 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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