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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026758 ID=TCONS_00026758|Name=TCONS_00026758|organism=Clytia hemisphaerica|type=transcript|length=168bp
ATTCCATTTAGTCACTGagtataagATCTTCAATTATCATAGGATGAATA
TTTGCAAATTCTCAATCAACAGTGTTGGCGAAGAGGCTTTCATTCAAATG
TTTTGccaagtagaagctctcaatcaaaggtttggtcaagtagaagctct
caatcaaagGTTTGttca Run BLAST on NCBI transcript from alignment at sc0000582:112370..115501- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026758 ID=TCONS_00026758|Name=TCONS_00026758|organism=Clytia hemisphaerica|type=transcript|length=3132bp|location=Sequence derived from alignment at sc0000582:112370..115501- (Clytia hemisphaerica)
ATTCCATTTAGTCACTGAGTATAAGGTATGTATCAGGCTTATGCTACACT
CGAACTTTCATCTCGCTTTTTCTCGAAATTTTGGTAGGGTGGTAGGGAAA
TACATTTGAAATAAATGAAATTACTTCTGCGGTAGCAGACCTCCTTTTCA
TGTATCGATTTAGATTGTGATTATTTTGTTAAAAGTTTGTCTTTCACAAA
GATAACTTTATGGAAGGTATGCTCCACTAAGTGCAGGTATGCGGAAATGG
CAAATTTAAAGAGACTTCTAAAAGTATTAAATGTTGTAGTAAAAGCGATA
AGGCCAATTATGAAGATCAAATTTTCGGACCAATTATTTTTAAGCTAGTC
AAGTCAACTGATACTGTCTAGCTAAATTCCAAAACTGAGTTAAGGAATAT
CCTAATTTGTTAGTTTTAAAGTTCCTAGACAGAAAGCTGTCACAAATCCA
AATGAATATCAAATTATCGCAAACATTTTAATTAGAACGTGTTCTTCATT
ATAAGGGGGGGGGGTTGTAGGGGTGCGAAATACCGTTTTCCCGTCTACAT
TTTTGCTGAATCCCGGAATCCCAAAAATTGAAAAAGCAATAACACCGTCA
CACCGGTTTGTACATGTTCAAATACCGGCATAATGACAAAAAATAAGGCT
GAATACCGTCACCGTCTGATTTTAAAATACAGTTTTCCCGTCTTTTTTTC
GTCAAATCCCATAATACCGTACCAAAAAAGGGCCAATCCCGTCACACCGT
AAAAGTACAACCCCCCCCCTTATAAAGCAGCATTTATTATTTTTCAATAG
AGGCCTTGTATCAATTCTTTTTAAATGACTGAAGGGTTACCCTAACAGGG
ACTTGGCTTTCATAAAGGGAATCCCACCCATAGTGTGCACCCCCCCCCCT
AATTGAGGAGGGGGCTTTGTTGATTTCGGTTTCAAATCTTTAGGTGGGAC
TTCGGATTTTTTGGATCTCAGGGGGGGTTAATAGGATGAGCTGGGACTAA
AATTTGATTGGTGGGACTTGCCAACTTCGTTACAGAGGCCTAATTTTCAA
GCACAAGTATACATACCATTTTAAAAATTTTCGCCTTCTTACTTAAACCA
ATTTGCTATTTAATGCTCTCTTCTTTATAAAATCATAATTTGAAGCATAT
CTTAATCTTTGAATCTTAGCGGAATCACTTTCATAGTTAAAAGGGGTCCA
CACAACCTTTGGGAACAGGAAAAGATTCGAGTTTTAGGTGGGACCAAGGA
TTCAAGTTATCAGCTCAGGTGGGGGTTTTAGATAGTGCTGGGACCTCATT
TTTTTGGTGGGACCTGGCACCTGGACCCCACTTGCACACTATGCCACCGT
AGACAAAGCAGGAAGTACAACTGCCAACCGCGTAGTCACCATTTTGGTTT
GTGAAGAAAACTTAAGTTTAGCCGCCTTGAACGTATGGCTAAACGTATGA
CTACTCCCGTCCCCTGCATGCAGACGCCATTTCTCTATTTTTACTATAGA
TTCGCAACGATTGTAGGGTACCCTGTTTCGGACTATGATAGATGAAAAGG
GACACTGAATGGGACTCAAAGAGGTGAAACCAGTGGCACATCCCTACAAG
TCTTTTTGACCAAATATTCAGCCCCCTCCAAATTTAATTTTTATTCTACG
ACGCCCTACCACCCTACCAAAATTTCGAGAAAAAGCGAGATGAAAGTTCG
AGTGTAGCATAGGCCTGATACATACCTTATACTCAGTGACTAAATGGATT
AGAGTATTTTTATCTGTAAAGTTTAAAAATATTGACGACTCGACTAACCT
TTCTCCAGAAATAAATGCTTGTGGCTGAATATTGAGCTTCTAACGCCTGC
GCATGTGCGACATATTTTTCAGTGACTAAATGGATTAGAGTATTTTTATC
TGTAACATTCGACACGAACTCAAGGAATGTCGATAAAAACGCTAAATATC
TAGTAACTGTACACAATTTTTATACTCACGCATGCTCCATAATAACCTCC
TCTTTTTACCTCGATTATTCTAAACATTGCTTTTGGTTACTAATCTGATT
CAAGCTGAATAAACGAGATTATATTCTAAACGAATCATTTCATTCTTGTT
TTTATTTTTAGTAAGATTAAATGCTTATTATAAGAATTTAACGAAAGATT
GAATCCCGCAACGACCCAGAAAAGTTATTTCACTCTTTATAAAAAAATTT
GGTTTGGTCTTTACACATACTAATTTGCTCTTCTTATAGAAAAAAAAACT
TAAGGGGGATGTTAGCTTAAGAAAAGTTTATAAAATGTCTCTACTGTAAC
CTAAGACTCTGTATCGTAGCTGAGATACTGTTTGTTTTCGAGTGTCTAAA
ACAAAAACAAGGCATTTATTTGAGACTCGTTTTTAAAAGAAACTTCTTGC
ATACATGCGAGTGTGAAGTTTGAAATAATCGAGTAAAGTGAACAAAAGGA
TATTTGTGCAGTTGTTTGGAGAAAGTTCCAATTCCAATCATTTAACTTTT
AACTTTGCGGTGTGAGGTAAGTATTTATGATTGTAAACATTTTCAATAAA
TTTTAAACTCGACACTCTAAAGTAAGACTTTTATCATTTTCTCATATAGA
TCTTCAATTATCATAGGATGAATATTTGCAAATTCTCAATCAACAGTGTT
GGCGAAGAGGCTTTCATTCAAATGTTTTGCCAAGTAGAAGCTCTCAATCA
AAGGTTTGGTCAAGTAGAAGCTCTCAATCAAAGATCTGGTCAAGTAGAAG
CTCTCAGTCAAAGGTTTTTTCACGAAGAAGCTCTCGATCAAAGATCTGGT
CAAGTAGAAGCTCTCGATCAAATGTTTGTTCAACTAGAAGCTCTCGATCA
AAGGTTTGGTCAAGTAGAAGCTCTCAATCAAAGATCTGGTCAAGTAGAAG
CTCTCATTTAAAGGTTTGTTCAGGTAGAAGCTCTCATTTAAAGGTTTGCT
CAAGTAGAAGCTCTCAATCAAAGATCTGGTCAAGTAGAAGCTCTCAATCA
AAGGTTTGACCAAGTAGAAGCTCTCAATCAAAGATCTGGTCAAGTAGAAG
CTCTCAATCAAAGGTCTGGTCAAGTAGAAGCTCTCAGTCAAAGGTCGGGT
CAAGTAGAAGCTCTCATTTAAACGTTTGTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026758-exon-sc0000582-1575043694:115477..115501 | TCONS_00026758-exon-sc0000582-1575043694:115477..115501 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1575043694:112769..112902 | TCONS_00026758-exon-sc0000582-1575043694:112769..112902 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1575043694:112370..112378 | TCONS_00026758-exon-sc0000582-1575043694:112370..112378 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1510915933:115477..115501 | TCONS_00026758-exon-sc0000582-1510915933:115477..115501 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1510915933:112769..112902 | TCONS_00026758-exon-sc0000582-1510915933:112769..112902 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1510915933:112370..112378 | TCONS_00026758-exon-sc0000582-1510915933:112370..112378 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1491911889:115477..115501 | TCONS_00026758-exon-sc0000582-1491911889:115477..115501 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1491911889:112769..112902 | TCONS_00026758-exon-sc0000582-1491911889:112769..112902 | Clytia hemisphaerica | exon |
| TCONS_00026758-exon-sc0000582-1491911889:112370..112378 | TCONS_00026758-exon-sc0000582-1491911889:112370..112378 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000582 | supercontig | sc0000582:112370..115501 - |
Blast
The following BLAST results are available for this feature:
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