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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026711 ID=TCONS_00026711|Name=TCONS_00026711|organism=Clytia hemisphaerica|type=transcript|length=770bp
gttttctttgatgttttcagagtttttttcataatgttcttttttgtttt
ctttgatgttttcagagtttgtcttataatgttcttttttgttttctttg
atgttttcagaGTTTTGATCATAGTATTTATAATTATATTCAGTTATACT
AGAAAGATTTTCTGTCTTACGTCTCTTTTGCTTgatttcctctgaatgat
tttCATAATGTCGCTTTTgccttgttttattttgatgttgacGTCCATGT
TTTTCTGCACTGTTTTTAAGATAATCATTATATAACACTGTTCTtttaaa
gttattcaatttttttactaagTTGCTTTGATTCTCAGAAAAATTTACTT
CTATATAAGCTATTTTAATGTGGTGCAATCCATCATGGATGGAACAAACA
TAATTGGTTACATCATCCAAAGCTGAAAATTCCAGCAAAATTGACCtacc
attttctttttcaacaattttaccTTCACCGTCACAACTTAGACAATTAA
ACatgtaaaatttatatttttcttttttcaattttactttcaatattGCA
ACGCAATGgtcattaataaaaataattgcTCCAGTAACGtgttcattaaa
aaatatgtcaaaaatatTTGTGTCAACTGCACTCTCATCTTGGAGTGTAT
CAATGCATATATCAGCCTGGCGAACAACCGTTATTTCAAACTGGTTATTT
TCTATTACAACACGTTGAGGTATTTCATCAATAGTTAACGACCTATTTAA
AGAAGTATCCTTGAAGATCT Run BLAST on NCBI protein sequence of TCONS_00026711-protein >TCONS_00026711-protein ID=TCONS_00026711-protein|Name=TCONS_00026711-protein|organism=Clytia hemisphaerica|type=polypeptide|length=256bp
IFKDTSLNRSLTIDEIPQRVVIENNQFEITVVRQADICIDTLQDESAVDT
NIFDIFFNEHVTGAIIFINDHCVAILKVKLKKEKYKFYMFNCLSCDGEGK
IVEKENGRSILLEFSALDDVTNYVCSIHDGLHHIKIAYIEVNFSENQSNL
VKKLNNFKRTVLYNDYLKNSAEKHGRQHQNKTRQKRHYENHSEEIKQKRR
KTENLSSITEYNYKYYDQNSENIKENKKEHYKTNSENIKENKKEHYEKNS
ENIKEN Run BLAST on NCBI transcript from alignment at sc0000581:1..770 Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026711 ID=TCONS_00026711|Name=TCONS_00026711|organism=Clytia hemisphaerica|type=transcript|length=770bp|location=Sequence derived from alignment at sc0000581:1..770 (Clytia hemisphaerica)
AGATCTTCAAGGATACTTCTTTAAATAGGTCGTTAACTATTGATGAAATA
CCTCAACGTGTTGTAATAGAAAATAACCAGTTTGAAATAACGGTTGTTCG
CCAGGCTGATATATGCATTGATACACTCCAAGATGAGAGTGCAGTTGACA
CAAatatttttgacatattttttaatgaacaCGTTACTGGAgcaattatt
tttattaatgacCATTGCGTTGCaatattgaaagtaaaattgaaaaaaga
aaaatataaattttacatGTTTAATTGTCTAAGTTGTGACGGTGAAggta
aaattgttgaaaaagaaaatggtaGGTCAATTTTGCTGGAATTTTCAGCT
TTGGATGATGTAACCAATTATGTTTGTTCCATCCATGATGGATTGCACCA
CATTAAAATAGCTTATATAGAAGTAAATTTTTCTGAGAATCAAAGCAAct
tagtaaaaaaattgaataactttaaaAGAACAGTGTTATATAATGATTAT
CTTAAAAACAGTGCAGAAAAACATGGACgtcaacatcaaaataaaacaag
gcAAAAGCGACATTATGaaaatcattcagaggaaatcAAGCAAAAGAGAC
GTAAGACAGAAAATCTTTCTAGTATAACTGAATATAATTATAAATACTAT
GATCAAAACtctgaaaacatcaaagaaaacaaaaaagaacattataagac
aaactctgaaaacatcaaagaaaacaaaaaagaacattatgaaaaaaact
ctgaaaacatcaaagaaaac Coding sequence (CDS) from alignment at sc0000581:1..770 >TCONS_00026711 ID=TCONS_00026711|Name=TCONS_00026711|organism=Clytia hemisphaerica|type=CDS|length=768bp|location=Sequence derived from alignment at sc0000581:1..770 (Clytia hemisphaerica)
ATCTTCAAGGATACTTCTTTAAATAGGTCGTTAACTATTGATGAAATACC
TCAACGTGTTGTAATAGAAAATAACCAGTTTGAAATAACGGTTGTTCGCC
AGGCTGATATATGCATTGATACACTCCAAGATGAGAGTGCAGTTGACACA
AatatttttgacatattttttaatgaacaCGTTACTGGAgcaattatttt
tattaatgacCATTGCGTTGCaatattgaaagtaaaattgaaaaaagaaa
aatataaattttacatGTTTAATTGTCTAAGTTGTGACGGTGAAggtaaa
attgttgaaaaagaaaatggtaGGTCAATTTTGCTGGAATTTTCAGCTTT
GGATGATGTAACCAATTATGTTTGTTCCATCCATGATGGATTGCACCACA
TTAAAATAGCTTATATAGAAGTAAATTTTTCTGAGAATCAAAGCAActta
gtaaaaaaattgaataactttaaaAGAACAGTGTTATATAATGATTATCT
TAAAAACAGTGCAGAAAAACATGGACgtcaacatcaaaataaaacaaggc
AAAAGCGACATTATGaaaatcattcagaggaaatcAAGCAAAAGAGACGT
AAGACAGAAAATCTTTCTAGTATAACTGAATATAATTATAAATACTATGA
TCAAAACtctgaaaacatcaaagaaaacaaaaaagaacattataagacaa
actctgaaaacatcaaagaaaacaaaaaagaacattatgaaaaaaactct
gaaaacatcaaagaaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026711-exon-sc0000581-1491911889:1..770 | TCONS_00026711-exon-sc0000581-1491911889:1..770 | Clytia hemisphaerica | exon |
| TCONS_00026711-exon-sc0000581-1510915933:1..770 | TCONS_00026711-exon-sc0000581-1510915933:1..770 | Clytia hemisphaerica | exon |
| TCONS_00026711-exon-sc0000581-1575043694:1..770 | TCONS_00026711-exon-sc0000581-1575043694:1..770 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000581 | supercontig | sc0000581:1..770 . |
Blast
The following BLAST results are available for this feature:
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