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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026537 ID=TCONS_00026537|Name=TCONS_00026537|organism=Clytia hemisphaerica|type=transcript|length=842bp
ATTTTTATTCgcagtttttattaaaaaaactgatttaTTACTTATAgtgc
aaaaaattatttgtcCAACGGGTTACACGtaactcaaaattttgaagagt
gaatgcaaatttaaatataatttATATACAGTCAATAAACTAACAAGAAA
AAGCCCAAGGCCTTAAAATTGGTACCAAAAACTGCAGCTTATGGCCTCAT
AGCGAAACAGAGATTGTTTGAGCTTTGAAATTTAAAGGTTTCTGTAAGAT
ATTATCCCACTtgtaaatatcttttcaacaaaaactaAACCCATTGTCTA
GTTATATTTTTTCTGTTACTATAATATTCTTTTCATCGTACGTAGAAGAT
CCAGTTTCCTTTCTTCTCGAATCCTTGCATATTGAATCTATCATCACACT
CAAACCTACCGTTGAATTCCACTAATATAATATGAACTTTGCCATCAACA
TAAATGAAATGGTCCCAGTAATTTTCACCATTCCACATCAAAACTTGATT
GCAGCCATAGAAATTCTGAATAAGTGATCGATCATCAGGAAGATAACGTA
TCTGTGAGCAAAGTCCATCATATTTCTTCGATTCAGTGATAAAGTCATTG
ATGGCTTCATTACCATACACGACAACATCTACAATCCTTTGATGCCATGG
TTTGAAACAACGTACCCGTATTTCATCATATCCATCCACTTTAAGAAGAT
TCCGAAATTGTTTCGGATTAATCATGAATTTTCCCGATGAGGTTTGGTCA
AGTTGATCAATGGTTGATGATGATCTGATATGGTTAACGTAAAGAGAATC
AATGTAGTCTTGTGCATTTTCTTCAACTGTGATATTCCCAAT Run BLAST on NCBI protein sequence of TCONS_00026537-protein >TCONS_00026537-protein ID=TCONS_00026537-protein|Name=TCONS_00026537-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
IGNITVEENAQDYIDSLYVNHIRSSSTIDQLDQTSSGKFMINPKQFRNLL
KVDGYDEIRVRCFKPWHQRIVDVVVYGNEAINDFITESKKYDGLCSQIRY
LPDDRSLIQNFYGCNQVLMWNGENYWDHFIYVDGKVHIILVEFNGRFECD
DRFNMQGFEKKGNWIFYVR Run BLAST on NCBI transcript from alignment at sc0000574:39137..39978 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026537 ID=TCONS_00026537|Name=TCONS_00026537|organism=Clytia hemisphaerica|type=transcript|length=842bp|location=Sequence derived from alignment at sc0000574:39137..39978 (Clytia hemisphaerica)
ATTGGGAATATCACAGTTGAAGAAAATGCACAAGACTACATTGATTCTCT
TTACGTTAACCATATCAGATCATCATCAACCATTGATCAACTTGACCAAA
CCTCATCGGGAAAATTCATGATTAATCCGAAACAATTTCGGAATCTTCTT
AAAGTGGATGGATATGATGAAATACGGGTACGTTGTTTCAAACCATGGCA
TCAAAGGATTGTAGATGTTGTCGTGTATGGTAATGAAGCCATCAATGACT
TTATCACTGAATCGAAGAAATATGATGGACTTTGCTCACAGATACGTTAT
CTTCCTGATGATCGATCACTTATTCAGAATTTCTATGGCTGCAATCAAGT
TTTGATGTGGAATGGTGAAAATTACTGGGACCATTTCATTTATGTTGATG
GCAAAGTTCATATTATATTAGTGGAATTCAACGGTAGGTTTGAGTGTGAT
GATAGATTCAATATGCAAGGATTCGAGAAGAAAGGAAACTGGATCTTCTA
CGTACGATGAAAAGAATATTATAGTAACAGAAAAAATATAACTAGACAAT
GGGTTtagtttttgttgaaaagatatttacaAGTGGGATAATATCTTACA
GAAACCTTTAAATTTCAAAGCTCAAACAATCTCTGTTTCGCTATGAGGCC
ATAAGCTGCAGTTTTTGGTACCAATTTTAAGGCCTTGGGCTTTTTCTTGT
TAGTTTATTGACTGTATATaaattatatttaaatttgcattcactcttca
aaattttgagttaCGTGTAACCCGTTGgacaaataattttttgcacTATA
AGTAAtaaatcagtttttttaataaaaactgcGAATAAAAAT Coding sequence (CDS) from alignment at sc0000574:39137..39978 >TCONS_00026537 ID=TCONS_00026537|Name=TCONS_00026537|organism=Clytia hemisphaerica|type=CDS|length=510bp|location=Sequence derived from alignment at sc0000574:39137..39978 (Clytia hemisphaerica)
ATTGGGAATATCACAGTTGAAGAAAATGCACAAGACTACATTGATTCTCT
TTACGTTAACCATATCAGATCATCATCAACCATTGATCAACTTGACCAAA
CCTCATCGGGAAAATTCATGATTAATCCGAAACAATTTCGGAATCTTCTT
AAAGTGGATGGATATGATGAAATACGGGTACGTTGTTTCAAACCATGGCA
TCAAAGGATTGTAGATGTTGTCGTGTATGGTAATGAAGCCATCAATGACT
TTATCACTGAATCGAAGAAATATGATGGACTTTGCTCACAGATACGTTAT
CTTCCTGATGATCGATCACTTATTCAGAATTTCTATGGCTGCAATCAAGT
TTTGATGTGGAATGGTGAAAATTACTGGGACCATTTCATTTATGTTGATG
GCAAAGTTCATATTATATTAGTGGAATTCAACGGTAGGTTTGAGTGTGAT
GATAGATTCAATATGCAAGGATTCGAGAAGAAAGGAAACTGGATCTTCTA
CGTACGATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026537-exon-sc0000574-1491911889:39137..39978 | TCONS_00026537-exon-sc0000574-1491911889:39137..39978 | Clytia hemisphaerica | exon |
| TCONS_00026537-exon-sc0000574-1510915933:39137..39978 | TCONS_00026537-exon-sc0000574-1510915933:39137..39978 | Clytia hemisphaerica | exon |
| TCONS_00026537-exon-sc0000574-1575043694:39137..39978 | TCONS_00026537-exon-sc0000574-1575043694:39137..39978 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000574 | supercontig | sc0000574:39137..39978 . |
Blast
The following BLAST results are available for this feature:
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