|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026437 ID=TCONS_00026437|Name=TCONS_00026437|organism=Clytia hemisphaerica|type=transcript|length=695bp
TATCGTATTTCCGGTCAAATTTGTATTGTAGAGGAACTGCTGTGGAATTT
TATCGATAGTGTAATTTTGACGAAGGCGAACTTTTCATCGTTTTGCAATC
TCGTGGACATCGATTATACAAGAAATGGCTCTTTTCGTAAATTTGTCTCA
CCGAAAACATTTTCCAAGGCGTTTTTTTCATGGGCATCCCACCAGCCAAG
AGAATTTAGGCGAGGTTGTAATTGGTGCGGAAGTAATCCAAATATTCTTG
CTTGCGATGGAACGAAGATTGGTATAATGCAAATCAATACATCGATTGAT
CCGATCGAAAAAACAAATGGCATGAAAATCACAACGACTGAACGTCGAAT
GGATCGTTGTTTTCTCTCCTACCCAGATAGAGTTGATGGTCAAACGGTGG
ACCAGcacaaagaaaaagagaagaaCGTACGTGACAGTCGGTTATTTCTT
CGTTATATAACGAAAAAGAAAAGCACACAACagaaaaagaaatcgaaaaa
aaaggaCAATAACCCCAAAGAATTAAACGAcctaaatgaaattgaatttg
agtCATACCGTGTGAAATTGTTAGATGTATTTCCTAAAGAGTGTACCTCT
CTTTTAACTCGTTACATGAATAGTGACATGACTACCATTCAAAAAGAGTG
TGCCAGACAAATATTTTATCTTCTTTCTTATGAAGCACCTATCCG Run BLAST on NCBI protein sequence of TCONS_00026437-protein >TCONS_00026437-protein ID=TCONS_00026437-protein|Name=TCONS_00026437-protein|organism=Clytia hemisphaerica|type=polypeptide|length=231bp
YRISGQICIVEELLWNFIDSVILTKANFSSFCNLVDIDYTRNGSFRKFVS
PKTFSKAFFSWASHQPREFRRGCNWCGSNPNILACDGTKIGIMQINTSID
PIEKTNGMKITTTERRMDRCFLSYPDRVDGQTVDQHKEKEKNVRDSRLFL
RYITKKKSTQQKKKSKKKDNNPKELNDLNEIEFESYRVKLLDVFPKECTS
LLTRYMNSDMTTIQKECARQIFYLLSYEAPI Run BLAST on NCBI transcript from alignment at sc0000571:6..700 Legend: exonthree_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026437 ID=TCONS_00026437|Name=TCONS_00026437|organism=Clytia hemisphaerica|type=transcript|length=695bp|location=Sequence derived from alignment at sc0000571:6..700 (Clytia hemisphaerica)
CGGATAGGTGCTTCATAAGAAAGAAGATAAAATATTTGTCTGGCACACTC
TTTTTGAATGGTAGTCATGTCACTATTCATGTAACGAGTTAAAAGAGAGG
TACACTCTTTAGGAAATACATCTAACAATTTCACACGGTATGactcaaat
tcaatttcatttaggTCGTTTAATTCTTTGGGGTTATTGtcctttttttt
cgatttctttttctGTTGTGTGCTTTTCTTTTTCGTTATATAACGAAGAA
ATAACCGACTGTCACGTACGttcttctctttttctttgtgCTGGTCCACC
GTTTGACCATCAACTCTATCTGGGTAGGAGAGAAAACAACGATCCATTCG
ACGTTCAGTCGTTGTGATTTTCATGCCATTTGTTTTTTCGATCGGATCAA
TCGATGTATTGATTTGCATTATACCAATCTTCGTTCCATCGCAAGCAAGA
ATATTTGGATTACTTCCGCACCAATTACAACCTCGCCTAAATTCTCTTGG
CTGGTGGGATGCCCATGAAAAAAACGCCTTGGAAAATGTTTTCGGTGAGA
CAAATTTACGAAAAGAGCCATTTCTTGTATAATCGATGTCCACGAGATTG
CAAAACGATGAAAAGTTCGCCTTCGTCAAAATTACACTATCGATAAAATT
CCACAGCAGTTCCTCTACAATACAAATTTGACCGGAAATACGATA Coding sequence (CDS) from alignment at sc0000571:6..700 >TCONS_00026437 ID=TCONS_00026437|Name=TCONS_00026437|organism=Clytia hemisphaerica|type=CDS|length=693bp|location=Sequence derived from alignment at sc0000571:6..700 (Clytia hemisphaerica)
GATAGGTGCTTCATAAGAAAGAAGATAAAATATTTGTCTGGCACACTCTT
TTTGAATGGTAGTCATGTCACTATTCATGTAACGAGTTAAAAGAGAGGTA
CACTCTTTAGGAAATACATCTAACAATTTCACACGGTATGactcaaattc
aatttcatttaggTCGTTTAATTCTTTGGGGTTATTGtccttttttttcg
atttctttttctGTTGTGTGCTTTTCTTTTTCGTTATATAACGAAGAAAT
AACCGACTGTCACGTACGttcttctctttttctttgtgCTGGTCCACCGT
TTGACCATCAACTCTATCTGGGTAGGAGAGAAAACAACGATCCATTCGAC
GTTCAGTCGTTGTGATTTTCATGCCATTTGTTTTTTCGATCGGATCAATC
GATGTATTGATTTGCATTATACCAATCTTCGTTCCATCGCAAGCAAGAAT
ATTTGGATTACTTCCGCACCAATTACAACCTCGCCTAAATTCTCTTGGCT
GGTGGGATGCCCATGAAAAAAACGCCTTGGAAAATGTTTTCGGTGAGACA
AATTTACGAAAAGAGCCATTTCTTGTATAATCGATGTCCACGAGATTGCA
AAACGATGAAAAGTTCGCCTTCGTCAAAATTACACTATCGATAAAATTCC
ACAGCAGTTCCTCTACAATACAAATTTGACCGGAAATACGATA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026437-exon-sc0000571-1491911889:6..700 | TCONS_00026437-exon-sc0000571-1491911889:6..700 | Clytia hemisphaerica | exon |
| TCONS_00026437-exon-sc0000571-1510915933:6..700 | TCONS_00026437-exon-sc0000571-1510915933:6..700 | Clytia hemisphaerica | exon |
| TCONS_00026437-exon-sc0000571-1575043694:6..700 | TCONS_00026437-exon-sc0000571-1575043694:6..700 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000571 | supercontig | sc0000571:6..700 . |
Blast
The following BLAST results are available for this feature:
|
