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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026422 ID=TCONS_00026422|Name=TCONS_00026422|organism=Clytia hemisphaerica|type=transcript|length=521bp
atttgttcatgTCTTTCGAGCAAACAGAggcaatcaaatttttgttaagT
GTATGTCTGGGCTTTGTATGAAATCGTTCCGCAAGAAAGTGAACTTGCAA
ACTCTGATTGTTGCCCACATCTCGAGATCTTTAAAAAGTATTTCGATGCA
AATTGGCAAAAACACCAATTGCTTCGTTTAGTACACAATTCACCAGCAAA
TACAAACCAAGATGGCGAAGAGGATGACGACGACGCTGACAGCTCTGACG
AAGCCGAAACACAGTTATTAGATGATTTTGTTGACTTAAACTTGGATGAT
TGTACTGACGAACCTTCAAACAAGAAAATAGTAGACGGTTTCGACACAAC
GACGAAAAGTTGGAATTTTTACTCGCCATTTAGTCGTGATGTCAGCACTA
ACCCCCTAGACGAACAACTGAAAAGGAACACCGTTATGCATTTGAAGCAA
GGAATTTTTGCAATCGAAGATGAGAACTTCGTGATTTCATTCGCACCGTC
ATGCGATTCTGAGTTATGTTG Run BLAST on NCBI transcript from alignment at sc0000571:1126..2306- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026422 ID=TCONS_00026422|Name=TCONS_00026422|organism=Clytia hemisphaerica|type=transcript|length=1181bp|location=Sequence derived from alignment at sc0000571:1126..2306- (Clytia hemisphaerica)
ATTTGTTCATGTCTTTCGAGCAAACAGAGGCAATCAAATTTTTGTTAAGT
GTATGTCTGGGCTTTGTATGAAATCGTTCCGCAAGAAAGTGAACTTGCAA
ACTCTGATTGTTGCCCACATCTCGAGATCTTTAAAAAGTATTTCGATGCA
AATTGGCAAAAACACCAATTGCTTCGTTTAGTACACAATTCACCAGCAAA
TACAAACCAAGATGGCGAAGAGGATGACGACGACGCTGACAGCTCTGACG
AAGCCGAAACACAGTTATTAGATGATTTTGTTGACTTAAACTTGGATGAT
TGTACTGACGAACCTTCAAACAAGAAAGTATGCTTTATTTTATCGTTCAT
CTTGTTTAGACCTTCAGGTCTAAATATCTTATCTTAAAGGAACTAATTTT
CGCGTTAACTAATTTTCGCGGGAAATTAGTTCCGTGAAATGCAAATTTTA
CTAGAAATCCTTGAAAACCCCTAAGAAAATAAAAGAATTCAGGCAAAAAG
TGGGTGTCTACCGCGAAAATTAGTTCCGCAAAAAACGCCAATTTCGTACC
CTCGCATCGCGAAAATTAGTTCCCTAAAGGTATGTTCCTGACTAAGTGGT
GGAAGAAAAAGATGAAGAAGCCTATAAAGGATACTTATTGCTTTTGTGTA
GGTTCATAATAATGTCTAGAGTGACGTTGAAAGGGGTTTCAGTATCCTAA
AACCTACACAATGCATTCTTCAAAAAAGCAAATAATATGTAGGACATGCA
TCTCCAGTTTTTAGGTGGTCTTTACACGTTGATTTCACCCCAGGATGAAG
CTAGGTGTCTAGGTGTTTAGTCATATATTAAAGTGATTTCATGTTTTTCT
GGGGTGAAACAGAGATGAAAATTCATCCCGAGATGAGATTCGAAAAAAAA
AACTGTCAAAAGAAAAAATGCGTGTAAAGACATAGAAGAAGTGTATTTTC
AGGGAAATAAGATGTCTTTTTTCAATTACATTTTTAGATAGTAGACGGTT
TCGACACAACGACGAAAAGTTGGAATTTTTACTCGCCATTTAGTCGTGAT
GTCAGCACTAACCCCCTAGACGAACAACTGAAAAGGAACACCGTTATGCA
TTTGAAGCAAGGAATTTTTGCAATCGAAGATGAGAACTTCGTGATTTCAT
TCGCACCGTCATGCGATTCTGAGTTATGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026422-exon-sc0000571-1575043694:1980..2306 | TCONS_00026422-exon-sc0000571-1575043694:1980..2306 | Clytia hemisphaerica | exon |
| TCONS_00026422-exon-sc0000571-1575043694:1126..1319 | TCONS_00026422-exon-sc0000571-1575043694:1126..1319 | Clytia hemisphaerica | exon |
| TCONS_00026422-exon-sc0000571-1510915933:1980..2306 | TCONS_00026422-exon-sc0000571-1510915933:1980..2306 | Clytia hemisphaerica | exon |
| TCONS_00026422-exon-sc0000571-1510915933:1126..1319 | TCONS_00026422-exon-sc0000571-1510915933:1126..1319 | Clytia hemisphaerica | exon |
| TCONS_00026422-exon-sc0000571-1491911889:1980..2306 | TCONS_00026422-exon-sc0000571-1491911889:1980..2306 | Clytia hemisphaerica | exon |
| TCONS_00026422-exon-sc0000571-1491911889:1126..1319 | TCONS_00026422-exon-sc0000571-1491911889:1126..1319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000571 | supercontig | sc0000571:1126..2306 - |
Blast
The following BLAST results are available for this feature:
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