TCONS_00026377 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026377
Unique NameTCONS_00026377
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2796

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026377 ID=TCONS_00026377|Name=TCONS_00026377|organism=Clytia hemisphaerica|type=transcript|length=2796bp
AATTATAGAGAGCTAATGAGCATGATATAAGGTGCTTCGGTACATGGAGA
AATGTCTTTCACCGATTGCTCTGGTAAGAAGGGAACCAACTCATTGCTCC
AAAACAAAAATGCCGATCACcgagaaattcattaaaaagctGTCCGACAA
GGCAAGACTGTCTGACAAGGCAAGACCAAAAGTCTATTTGAGAGATGAAA
TGGAGGAAGAAGATTATAAAGTACAGACCTACCAATATGGTACCACAAGT
CACACAGATGGTGATATGAAACCTGCTGCGGTGATCTATCCTGGTGATCT
CGATGACATCAAGTTATTGGTTAAAGAAGCTGCCGAAAATGATTTTGGTA
TCGCCGTCAGATCAGGAGGGCATCAATACAGCGGTGCTTCATCAACATCT
GGGGATAATGTGTTACTGGATACTTCAGATGTTTTTGAAGATTTCACATA
TCCGTCAGAAGAAGATTCAGAACTTGCTAAAATCGGTGTCAGTATGTCAT
TGGATCAGATGAATCAAAAGATGAGAGACAATCAAATATTTCTACCACAT
GGTCAATGCCTTCATGTACATTTAGGTGGTCATGTGCAAACAGGTGGCTA
TGGGCAATTGGGTCGATCATTTGGCTTGCTAAGTGATCATATTGAAGGCT
TCAACATTGTTCTAGCTAATGCAACTGACTTACAAGTATGGTCACCAAAA
AGGAAAGCAGTTGAATCATTATCCGCTGATGCCAAGAAACGTAATGACGA
TTTGTACTGGGCAGTACTGGGTGGAAGTCCTGGCAACTTTGGAATCTTAA
CACATGTCTGGGTACGCCCACGTAAAGATGATGATCATCCTGATTCTCGT
GGTTTGAGGGATTTCTGTTTCTACACCAAAGAAAGATTGGAAAAAGTCCT
GGCAGTGATTGCAGAAATGAACGACAAAAAAGATTTAGCACGTGACTTCG
ATATTTGCTGTACTGTTATGTCTGATGCTAATCATTGTGGATTCCTTGAA
ATGTTAGAAACATTAAAAGCTAGGTCAAAGGGAGAAAAACCGCTGAAAGG
GAAAGAAGAACCACTAGACCCAGATTATCTTGACGAATACATGCGAAGTA
AACACAAAGAAGAGTATGCCGATGGCGTGGATGGCTTGGATACTTCTGGA
AATCCTGGTTTAATGCTCCCTGTTATTCTTGTCTACTTGCAATGGGCCAA
CGTTGACAAAAATGCTAAGTTCGGTGATAATGATGAAGCGGACTGGTTCA
CGAAAGTCAGAGCTGCATTACTTACCCCAGTTTCAGATGGAGACAAAAAA
AAGGAGTATTTTTTTACAGAGTTCAAACAAACAAAAGTGAATGTAGATTG
GCAGTTTGTGGATGAGAAAGAACACACAGCAATGTCAAAGCTGACACGGT
ATTGGTGTTACAAGAATATCCGTGAGTTTGTTCAACCATACGAGAAGAGA
GTTTATGTGACCGAACGAAAGAATCTCAGCAAAAAAGATGACGTCTTGAA
GAAAACATGGCCAGAATGGGCGACAGAGAGGATTGACGAAATCATGGTAG
ATGGAAATGAAGAGATGAATCTTGTTGTTCAGATTCAACCATTTGGTGGT
GACAATTCAATGTTCAACAAAAATGGTGACCCAAGTGATCAAACAACGCA
TGGAGACCATGGTTGCCACAGCTGGCGTCAAGACATATCCTTGGTTCAGG
TTTTGGATTACTTCTATCGATCAGCAGATAAAGAAGCCATTCATGACCCT
GCTAAGGATAAACACTTGATAACTGGTCTCGAATGGCAAGCTGAAAATGA
CAAGACTGCAGGAACCACAGATGGGAATAAAGGCTTCTTCTCTGAGTTTG
ATCGCCGATTACTTTGGGGATCGTATGCTCGACTCACTGACCCCGATGAA
GGAACAAGTCTTGATTCTCTTCACAAGTGTTACTTCGATACTGATCAAAA
ATACAACGATCTGGTCGAAATCAAAAAAGATGTCGATAAAGATCACATCT
TCACGCCAAATTCGTTTGCAGTTGGAGCTAAGGATGCACCTGACAAACGA
AATCTTCCTATCCGTGGGCGTGGTCACAAGGCTTATCTTGAAAAAGCATC
TGGAAAGAAACAATAAACGTATTTCTAAATGAAATTATCATGTGCTTAAC
ATTTTTTGTGCTTTTGTGCAAgtaattttaaataattttaaaaatttcga
tttaGTTTAATCCATGTTAAGTCCTATTATTATCAGTTTTGTCCATGTTT
AGtaattattaaaaattattGGTTGAATCTAAAACTagtgaattttaaaa
atattttagtctCTTTTATTCATCTACTTAAAAGTAACTTTCCAACAAGA
TGTTACTTTCAATCAATATTTGTTCTTTCAAGAACAATACTGAGAATGTT
CCGAGCATGTCTTTTTTTAGAACAgactttaataaaaaaattgtctCGAA
AGTTACCAAGTAGAACATTAATACAATGTGTTAAAAAATAACAGattatt
tgtctttttttctttagtATTTTTCATGGAACAATAGATTACaccttttt
tttattaaaacaccTAAGATTTGGTTGTGcttggatgtgcttattttttt
agcaattttcagcctgaaatgttcttaaatgcaatcttaatttttcagac
tactctaaatcgacaataaagagacttaaaattgtaaaatttggacaata
tttgactctcgattttagaaaatccatccctaagttcggttaaaactgct
tgaaaagaggaaaaattgtgtttcttgtcattttattccaaactga
Run BLAST on NCBI

protein sequence of TCONS_00026377-protein

>TCONS_00026377-protein ID=TCONS_00026377-protein|Name=TCONS_00026377-protein|organism=Clytia hemisphaerica|type=polypeptide|length=690bp
MEKCLSPIALVRREPTHCSKTKMPITEKFIKKLSDKARLSDKARPKVYLR
DEMEEEDYKVQTYQYGTTSHTDGDMKPAAVIYPGDLDDIKLLVKEAAEND
FGIAVRSGGHQYSGASSTSGDNVLLDTSDVFEDFTYPSEEDSELAKIGVS
MSLDQMNQKMRDNQIFLPHGQCLHVHLGGHVQTGGYGQLGRSFGLLSDHI
EGFNIVLANATDLQVWSPKRKAVESLSADAKKRNDDLYWAVLGGSPGNFG
ILTHVWVRPRKDDDHPDSRGLRDFCFYTKERLEKVLAVIAEMNDKKDLAR
DFDICCTVMSDANHCGFLEMLETLKARSKGEKPLKGKEEPLDPDYLDEYM
RSKHKEEYADGVDGLDTSGNPGLMLPVILVYLQWANVDKNAKFGDNDEAD
WFTKVRAALLTPVSDGDKKKEYFFTEFKQTKVNVDWQFVDEKEHTAMSKL
TRYWCYKNIREFVQPYEKRVYVTERKNLSKKDDVLKKTWPEWATERIDEI
MVDGNEEMNLVVQIQPFGGDNSMFNKNGDPSDQTTHGDHGCHSWRQDISL
VQVLDYFYRSADKEAIHDPAKDKHLITGLEWQAENDKTAGTTDGNKGFFS
EFDRRLLWGSYARLTDPDEGTSLDSLHKCYFDTDQKYNDLVEIKKDVDKD
HIFTPNSFAVGAKDAPDKRNLPIRGRGHKAYLEKASGKKQ
Run BLAST on NCBI

transcript from alignment at sc0000570:135143..139193+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026377 ID=TCONS_00026377|Name=TCONS_00026377|organism=Clytia hemisphaerica|type=transcript|length=4051bp|location=Sequence derived from alignment at sc0000570:135143..139193+ (Clytia hemisphaerica)
AATTATAGAGAGCTAATGAGCATGATATAAGGTGCTTCGGTACATGGAGA AATGTCTTTCACCGATTGCTCTGGTAAGAAGGGAACCAACTCATTGCTCC AAAACAAAAATGCCGATCACcgagaaattcattaaaaagctGTCCGACAA GGCAAGACTGTCTGACAAGGCAAGACCAAAAGTCTATTTGAGAGATGAAA TGGAGGAAGAAGATTATAAAGTACAGACCTACCAATATGGTACCACAAGT CACACAGATGGTGATATGAAACCTGCTGCGGTGATCTATCCTGGTGATCT CGATGACATCAAGTTATTGGTTAAAGAAGCTGCCGAAAATGATTTTGGTA TCGCCGTCAGATCAGGAGGGCATCAATACAGCGGTGCTTCATCAACATCT GGGGATAATGTGTTACTGGATACTTCAGATGTTTTTGAAGATTTCACATA TCCGTCAGAAGAAGATTCAGAACTTGCTAAAATCGGTGTCAGTATGTCAT TGGATCAGATGAATCAAAAGATGAGAGACAATCAAATATTTCTACCACAT GGTCAATGCCTTCATGTACATTTAGGTGGTCATGTGCAAACAGGTAGGCT TTTGACTTTCTTTTAGGCTgggcaaaaattcaaaaacatgtAGTGTTTtt ggaaaccggccgggtgaacaACAAAAAATTCTGATCCGGCCGTAGACTTT GTGAAAagttgatacttcattagtattcagggcttacttcatactgtttg tacataaaaattatctttaaagttctatttcaatgatcttaagttatcaa aagtaGCAAAAAAACATGTTATGCGATTCATTGATTATGTTAAATTCCTC GGCGTAACGCTGAATCAAGCGCGCTTGTTGAcataaatcgcgataaaaag cGGTTTTTGTTTAATAGGCTAGCTGGCCGCATGAGAGCTTATTTctttca cccgcattccggaaacacatttctttattttcgccttgggtcattttttt ttaatctgaaaTAATCTGACAGGGTtgcaaatttgcaaaatttttgtttc tgaCAGGGTCGACCTTTGGCCAATCCCGTCTCAGAATTTCAAGATTGCAT TTGAAAGGgtacaaattttatttgttaGGGTCTATTTTTTGTCGATCATT TGCCTGACAGACAgggttaaattttgataaaaattggtCTCTGACAGGGT CGTTTTTTTACTCTAGCGGCATGTACCCATCCACCGATACGGACtacttc ttttaaaaaattttatcaacCTAGTCTGAAATACCTGCTCTATTTTCTCT AAAAACTCAAGTATTCTTTAAGTTCTATTATCAACTGTGAGTTGATTTCT TAGCGATAAATAAACTAcgtagttttgtttttgtttaaaggccggtttcc acttgTGCGCGCTTCgatcgatcgcactttttcactccaggggattaagg cggggtccaacctcgttccctgcgtattatcagctttttgatgcttactg atagtgctagataattctctggcgtcaatcagtaacgtaaataaagcctg ggatacacggggacgaggttgggcggggtcaaaatgcttgcaacgttaca aatcatttctAGAAGCTCACTTAGGGCTCAAATGAAGGGTATCTGTAAGT AGAATAAGATTCAATCTAGGAAGATGTTTTCCTATTaagaaattttgcgt aattctcAAAAAAACCTCGTTAGTTTTAGTCTAATGGCTTTTTCGACCGG GTTTATCTAGCGGAAGATTGGAGATAGGGGTGTTTTTTCAACTGTAAGTA ACTTAAGCAACGTGATTGAATTAACctttatttgttttcatttggcAGGT GGCTATGGGCAATTGGGTCGATCATTTGGCTTGCTAAGTGATCATATTGA AGGCTTCAACATTGTTCTAGCTAATGCAACTGACTTACAAGTATGGTCAC CAAAAAGGAAAGCAGTTGAATCATTATCCGCTGATGCCAAGAAACGTAAT GACGATTTGTACTGGGCAGTACTGGGTGGAAGTCCTGGCAACTTTGGAAT CTTAACACATGTCTGGGTACGCCCACGTAAAGATGATGATCATCCTGATT CTCGTGGTTTGAGGGATTTCTGTTTCTACACCAAAGAAAGATTGGAAAAA GTCCTGGCAGTGATTGCAGAAATGAACGACAAAAAAGATTTAGCACGTGA CTTCGATATTTGCTGTACTGTTATGTCTGATGCTAATCATTGTGGATTCC TTGAAATGTTAGAAACATTAAAAGCTAGGTCAAAGGGAGAAAAACCGCTG AAAGGGAAAGAAGAACCACTAGACCCAGATTATCTTGACGAATACATGCG AAGTAAACACAAAGAAGAGTATGCCGATGGCGTGGATGGCTTGGATACTT CTGGAAATCCTGGTTTAATGCTCCCTGTTATTCTTGTCTACTTGCAATGG GCCAACGTTGACAAAAATGCTAAGTTCGGTGATAATGATGAAGCGGACTG GTTCACGAAAGTCAGAGCTGCATTACTTACCCCAGTTTCAGATGGAGACA AAAAAAAGGAGTATTTTTTTACAGAGTTCAAACAAACAAAAGTGAATGTA GATTGGCAGTTTGTGGATGAGAAAGAACACACAGCAATGTCAAAGCTGAC ACGGTATTGGTGTTACAAGAATATCCGTGAGTTTGTTCAACCATACGAGA AGAGAGTTTATGTGACCGAACGAAAGAATCTCAGCAAAAAAGATGACGTC TTGAAGAAAACATGGCCAGAATGGGCGACAGAGAGGATTGACGAAATCAT GGTAGATGGAAATGAAGAGATGAATCTTGTTGTTCAGATTCAACCATTTG GTGGTGACAATTCAATGTTCAACAAAAATGGTGACCCAAGTGATCAAACA ACGCATGGAGACCATGGTTGCCACAGCTGGCGTCAAGACATATCCTTGGT TCAGGTTTTGGATTACTTCTATCGATCAGCAGATAAAGAAGCCATTCATG ACCCTGCTAAGGATAAACACTTGATAACTGGTCTCGAATGGCAAGCTGAA AATGACAAGACTGCAGGAACCACAGATGGGAATAAAGGCTTCTTCTCTGA GTTTGATCGCCGATTACTTTGGGGATCGTATGCTCGACTCACTGACCCCG ATGAAGGAACAAGTCTTGATTCTCTTCACAAGTGTTACTTCGATACTGAT CAAAAATACAACGATCTGGTCGAAATCAAAAAAGATGTCGATAAAGATCA CATCTTCACGCCAAATTCGTTTGCAGTTGGAGCTAAGGATGCACCTGACA AACGAAATCTTCCTATCCGTGGGCGTGGTCACAAGGCTTATCTTGAAAAA GCATCTGGAAAGAAACAATAAACGTATTTCTAAATGAAATTATCATGTGC TTAACATTTTTTGTGCTTTTGTGCAAgtaattttaaataattttaaaaat ttcgatttaGTTTAATCCATGTTAAGTCCTATTATTATCAGTTTTGTCCA TGTTTAGtaattattaaaaattattGGTTGAATCTAAAACTagtgaattt taaaaatattttagtctCTTTTATTCATCTACTTAAAAGTAACTTTCCAA CAAGATGTTACTTTCAATCAATATTTGTTCTTTCAAGAACAATACTGAGA ATGTTCCGAGCATGTCTTTTTTTAGAACAgactttaataaaaaaattgtc tCGAAAGTTACCAAGTAGAACATTAATACAATGTGTTAAAAAATAACAGa ttatttgtctttttttctttagtATTTTTCATGGAACAATAGATTACacc ttttttttattaaaacaccTAAGATTTGGTTGTGcttggatgtgcttatt tttttagcaattttcagcctgaaatgttcttaaatgcaatcttaattttt cagactactctaaatcgacaataaagagacttaaaattgtaaaatttgga caatatttgactctcgattttagaaaatccatccctaagttcggttaaaa ctgcttgaaaagaggaaaaattgtgtttcttgtcattttattccaaactg a

Coding sequence (CDS) from alignment at sc0000570:135143..139193+

>TCONS_00026377 ID=TCONS_00026377|Name=TCONS_00026377|organism=Clytia hemisphaerica|type=CDS|length=4146bp|location=Sequence derived from alignment at sc0000570:135143..139193+ (Clytia hemisphaerica)
ATGGAGAAATGTCTTTCACCGATTGCTCTGGTAAGAAGGGAACCAACTCA
TTGCTCCAAAACAAAAATGCCGATCACcgagaaattcattaaaaagctGT
CCGACAAGGCAAGACTGTCTGACAAGGCAAGACCAAAAGTCTATTTGAGA
GATGAAATGGAGGAAGAAGATTATAAAGTACAGACCTACCAATATGGTAC
CACAAGTCACACAGATGGTGATATGAAACCTGCTGCGGTGATCTATCCTG
GTGATCTCGATGACATCAAGTTATTGGTTAAAGAAGCTGCCGAAAATGAT
TTTGGTATCGCCGTCAGATCAGGAGGGCATCAATACAGCGGTGCTTCATC
AACATCTGGGGATAATGTGTTACTGGATACTTCAGATGTTTTTGAAGATT
TCACATATCCGTCAGAAGAAGATTCAGAACTTGCTAAAATCGGTGTCAGT
ATGTCATTGGATCAGATGAATCAAAAGATGAGAGACAATCAAATATTTCT
ACCACATGGTCAATGCCTTCATGTACATTTAGGTGGTCATGTGCAAACAG
GTGGCTATGGGCAATTGGGTCGATCATTTGGCTTGCTAAGTGATCATATT
GAAGGCTTCAACATTGTTCTAGCTAATGCAACTGACTTACAAGTATGGTC
ACCAAAAAGGAAAGCAGTTGAATCATTATCCGCTGATGCCAAGAAACGTA
ATGACGATTTGTACTGGGCAGTACTGGGTGGAAGTCCTGGCAACTTTGGA
ATCTTAACACATGTCTGGGTACGCCCACGTAAAGATGATGATCATCCTGA
TTCTCGTGGTTTGAGGGATTTCTGTTTCTACACCAAAGAAAGATTGGAAA
AAGTCCTGGCAGTGATTGCAGAAATGAACGACAAAAAAGATTTAGCACGT
GACTTCGATATTTGCTGTACTGTTATGTCTGATGCTAATCATTGTGGATT
CCTTGAAATGTTAGAAACATTAAAAGCTAGGTCAAAGGGAGAAAAACCGC
TGAAAGGGAAAGAAGAACCACTAGACCCAGATTATCTTGACGAATACATG
CGAAGTAAACACAAAGAAGAGTATGCCGATGGCGTGGATGGCTTGGATAC
TTCTGGAAATCCTGGTTTAATGCTCCCTGTTATTCTTGTCTACTTGCAAT
GGGCCAACGTTGACAAAAATGCTAAGTTCGGTGATAATGATGAAGCGGAC
TGGTTCACGAAAGTCAGAGCTGCATTACTTACCCCAGTTTCAGATGGAGA
CAAAAAAAAGGAGTATTTTTTTACAGAGTTCAAACAAACAAAAGTGAATG
TAGATTGGCAGTTTGTGGATGAGAAAGAACACACAGCAATGTCAAAGCTG
ACACGGTATTGGTGTTACAAGAATATCCGTGAGTTTGTTCAACCATACGA
GAAGAGAGTTTATGTGACCGAACGAAAGAATCTCAGCAAAAAAGATGACG
TCTTGAAGAAAACATGGCCAGAATGGGCGACAGAGAGGATTGACGAAATC
ATGGTAGATGGAAATGAAGAGATGAATCTTGTTGTTCAGATTCAACCATT
TGGTGGTGACAATTCAATGTTCAACAAAAATGGTGACCCAAGTGATCAAA
CAACGCATGGAGACCATGGTTGCCACAGCTGGCGTCAAGACATATCCTTG
GTTCAGGTTTTGGATTACTTCTATCGATCAGCAGATAAAGAAGCCATTCA
TGACCCTGCTAAGGATAAACACTTGATAACTGGTCTCGAATGGCAAGCTG
AAAATGACAAGACTGCAGGAACCACAGATGGGAATAAAGGCTTCTTCTCT
GAGTTTGATCGCCGATTACTTTGGGGATCGTATGCTCGACTCACTGACCC
CGATGAAGGAACAAGTCTTGATTCTCTTCACAAGTGTTACTTCGATACTG
ATCAAAAATACAACGATCTGGTCGAAATCAAAAAAGATGTCGATAAAGAT
CACATCTTCACGCCAAATTCGTTTGCAGTTGGAGCTAAGGATGCACCTGA
CAAACGAAATCTTCCTATCCGTGGGCGTGGTCACAAGGCTTATCTTGAAA
AAGCATCTGGAAAGAAACAATAAATGGAGAAATGTCTTTCACCGATTGCT
CTGGTAAGAAGGGAACCAACTCATTGCTCCAAAACAAAAATGCCGATCAC
cgagaaattcattaaaaagctGTCCGACAAGGCAAGACTGTCTGACAAGG
CAAGACCAAAAGTCTATTTGAGAGATGAAATGGAGGAAGAAGATTATAAA
GTACAGACCTACCAATATGGTACCACAAGTCACACAGATGGTGATATGAA
ACCTGCTGCGGTGATCTATCCTGGTGATCTCGATGACATCAAGTTATTGG
TTAAAGAAGCTGCCGAAAATGATTTTGGTATCGCCGTCAGATCAGGAGGG
CATCAATACAGCGGTGCTTCATCAACATCTGGGGATAATGTGTTACTGGA
TACTTCAGATGTTTTTGAAGATTTCACATATCCGTCAGAAGAAGATTCAG
AACTTGCTAAAATCGGTGTCAGTATGTCATTGGATCAGATGAATCAAAAG
ATGAGAGACAATCAAATATTTCTACCACATGGTCAATGCCTTCATGTACA
TTTAGGTGGTCATGTGCAAACAGGTGGCTATGGGCAATTGGGTCGATCAT
TTGGCTTGCTAAGTGATCATATTGAAGGCTTCAACATTGTTCTAGCTAAT
GCAACTGACTTACAAGTATGGTCACCAAAAAGGAAAGCAGTTGAATCATT
ATCCGCTGATGCCAAGAAACGTAATGACGATTTGTACTGGGCAGTACTGG
GTGGAAGTCCTGGCAACTTTGGAATCTTAACACATGTCTGGGTACGCCCA
CGTAAAGATGATGATCATCCTGATTCTCGTGGTTTGAGGGATTTCTGTTT
CTACACCAAAGAAAGATTGGAAAAAGTCCTGGCAGTGATTGCAGAAATGA
ACGACAAAAAAGATTTAGCACGTGACTTCGATATTTGCTGTACTGTTATG
TCTGATGCTAATCATTGTGGATTCCTTGAAATGTTAGAAACATTAAAAGC
TAGGTCAAAGGGAGAAAAACCGCTGAAAGGGAAAGAAGAACCACTAGACC
CAGATTATCTTGACGAATACATGCGAAGTAAACACAAAGAAGAGTATGCC
GATGGCGTGGATGGCTTGGATACTTCTGGAAATCCTGGTTTAATGCTCCC
TGTTATTCTTGTCTACTTGCAATGGGCCAACGTTGACAAAAATGCTAAGT
TCGGTGATAATGATGAAGCGGACTGGTTCACGAAAGTCAGAGCTGCATTA
CTTACCCCAGTTTCAGATGGAGACAAAAAAAAGGAGTATTTTTTTACAGA
GTTCAAACAAACAAAAGTGAATGTAGATTGGCAGTTTGTGGATGAGAAAG
AACACACAGCAATGTCAAAGCTGACACGGTATTGGTGTTACAAGAATATC
CGTGAGTTTGTTCAACCATACGAGAAGAGAGTTTATGTGACCGAACGAAA
GAATCTCAGCAAAAAAGATGACGTCTTGAAGAAAACATGGCCAGAATGGG
CGACAGAGAGGATTGACGAAATCATGGTAGATGGAAATGAAGAGATGAAT
CTTGTTGTTCAGATTCAACCATTTGGTGGTGACAATTCAATGTTCAACAA
AAATGGTGACCCAAGTGATCAAACAACGCATGGAGACCATGGTTGCCACA
GCTGGCGTCAAGACATATCCTTGGTTCAGGTTTTGGATTACTTCTATCGA
TCAGCAGATAAAGAAGCCATTCATGACCCTGCTAAGGATAAACACTTGAT
AACTGGTCTCGAATGGCAAGCTGAAAATGACAAGACTGCAGGAACCACAG
ATGGGAATAAAGGCTTCTTCTCTGAGTTTGATCGCCGATTACTTTGGGGA
TCGTATGCTCGACTCACTGACCCCGATGAAGGAACAAGTCTTGATTCTCT
TCACAAGTGTTACTTCGATACTGATCAAAAATACAACGATCTGGTCGAAA
TCAAAAAAGATGTCGATAAAGATCACATCTTCACGCCAAATTCGTTTGCA
GTTGGAGCTAAGGATGCACCTGACAAACGAAATCTTCCTATCCGTGGGCG
TGGTCACAAGGCTTATCTTGAAAAAGCATCTGGAAAGAAACAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014809XLOC_014809Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026377-proteinTCONS_00026377-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026377-exon-sc0000570-1491911889:135143..135735TCONS_00026377-exon-sc0000570-1491911889:135143..135735Clytia hemisphaericaexon
TCONS_00026377-exon-sc0000570-1510915933:135143..135735TCONS_00026377-exon-sc0000570-1510915933:135143..135735Clytia hemisphaericaexon
TCONS_00026377-exon-sc0000570-1575043694:135143..135735TCONS_00026377-exon-sc0000570-1575043694:135143..135735Clytia hemisphaericaexon
TCONS_00026377-exon-sc0000570-1491911889:136991..139193TCONS_00026377-exon-sc0000570-1491911889:136991..139193Clytia hemisphaericaexon
TCONS_00026377-exon-sc0000570-1510915933:136991..139193TCONS_00026377-exon-sc0000570-1510915933:136991..139193Clytia hemisphaericaexon
TCONS_00026377-exon-sc0000570-1575043694:136991..139193TCONS_00026377-exon-sc0000570-1575043694:136991..139193Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000570supercontigsc0000570:135143..139193 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.158748 0.27567 0.208576 0.152376 0.149532 0.0294984 0.0923048 0.215611 0.109267 0.244213 0 0.146557 10.6527 13.9285 325.382 234.356 5.76517 8.23231 521.11 265.314 0.0934219 0.127187 4.68999 3.38993 0.0883438 0.140762 0.156188 0.105947 0.0826208 0.0728106
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR016167FAD-bd_2_sub1
IPR016169CO_DH_flavot_FAD-bd_sub2
IPR006094Oxid_FAD_bind_N
IPR006093Oxy_OxRdtase_FAD_BS
IPR016166FAD-bd_2
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0016491oxidoreductase activity
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055114 oxidation-reduction process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026377 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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