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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026369 ID=TCONS_00026369|Name=TCONS_00026369|organism=Clytia hemisphaerica|type=transcript|length=1607bp
AAAAAATGTGGGAGAAATGGAATGCAGTTTCGACTCGTTTCCAAGAATTT
ATCCTTCAGGGAATCTACAAAGATATCATTGTCTGCTAATTATATAGATG
AAAATCCTCTCTAAATTTAGTAGCTAAATGATACCTAGATGTTGAACCAG
TTTGCATAGGTACtttctgaattatttttactttttggattGGATTCAAc
tgatgtttgttttgatttttgattgataACGCAACATGTCTCAAACATTA
ACATCTATCCAAGCTCTAGAAAATGGAAACCATTTTGATAATGTCACATT
CAGCAAAGGTGAAGAGGAGGGACCAAAAGTCACTTTTCGCAACAATAGTT
TTTATATTGTGTCAGCTCTTCTCTTTCAAGAAGATAAAGTTCTTTTGGTC
AGTGAAGCAAAACATGATGGAAAATGGTATCTTCCTGCTGGGAAAGTCAA
GTATCAAGAGAGTTTAAAAAATGCCTTCAAAAGGGAACTGTTGGAAGAGA
GCTCATACAAAGGAGAGCCTGATCATCTTCTTAGTATTAATGCCGGACCT
GGTGGTTGGTTTCGCTTTAATTTCATTGGTCACCAAACAGGAGGACATTT
AAAAACACCTGCTGAAGCTGACAAAGACACTTTAGAGGCAAGATGGTTTC
CATGTTCAGAAATCTTCAATGGAGATCTTAATTACAGggCCCAAGATATG
TTTGAGGTGATAAAAGATGGTATACTTTGGAATCAACAAAATGGTGCACT
ACAACGGGAAAAGTCTATCATATTGGAAAATTCATTCAACAGCTTCTGCT
TGAGACCATTAGCTTTTGATTTGAATGGGGCTAATGTGCAATTAGCAATT
CATCATGAAACTGGAAAAGTTCCGCTCATAAGGATGGGGATGTACTATCA
AAAAGTTGTTacagattttttccaaaaaagtggAATACAAGTCCAGGTTT
TGGGAATTTTAGCTGTAGAGCATTCACCAAGAGAAGATAGTTGGGATGGG
TACTGCTTGAATGTTATTTGTAAATTGGATCGTGAAAACTCTACAGGAAT
GAGCAATTTCAAATGGATTGATTTGGATTCAAACCTTTCATCTGCAATCA
ACAAAATCATTGGCACACAATCATATGTTTGGGCTTTTAAATAAGCAATT
TcgcttttgtttttttactgtTCTCATTGAGTTTTTAGGTCATTTCAACT
ATTCTGGGTCTGATTTCAATGGTAACAACGTTTCAGCATTATTTTCCTTC
ACATTTTACAAACCCAAACTATCTTCTAGCTAGTTTACTAAAACAGAAAC
TCAACCTGTTTCCTGAGGGTCAACCTTTTTAACCAAATTAGTTGATTGAT
TTGTTAAAAACAACCTTGAATTCTGAAACCTAGGGGTTTACAACTGAAAT
CTTTGTTATCTTTTCACATCGGTGGCGGGTCTacctaaaattttttgatt
ttgattttatttttttaagaatttgaaatgtttttaaatttgtttattta
ttgttAATATTTTCATACCTGGCTTTTTTAAATTGTAGCTCACTCACAAA
TTACTTAAAAAGTGATAATTGTTGTTTTGTGCTTGTGATTTTCTGTTGAT
TATTAAT Run BLAST on NCBI protein sequence of TCONS_00026369-protein >TCONS_00026369-protein ID=TCONS_00026369-protein|Name=TCONS_00026369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MSQTLTSIQALENGNHFDNVTFSKGEEEGPKVTFRNNSFYIVSALLFQED
KVLLVSEAKHDGKWYLPAGKVKYQESLKNAFKRELLEESSYKGEPDHLLS
INAGPGGWFRFNFIGHQTGGHLKTPAEADKDTLEARWFPCSEIFNGDLNY
RAQDMFEVIKDGILWNQQNGALQREKSIILENSFNSFCLRPLAFDLNGAN
VQLAIHHETGKVPLIRMGMYYQKVVTDFFQKSGIQVQVLGILAVEHSPRE
DSWDGYCLNVICKLDRENSTGMSNFKWIDLDSNLSSAINKIIGTQSYVWA
FK Run BLAST on NCBI transcript from alignment at sc0000570:19206..24739+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026369 ID=TCONS_00026369|Name=TCONS_00026369|organism=Clytia hemisphaerica|type=transcript|length=5534bp|location=Sequence derived from alignment at sc0000570:19206..24739+ (Clytia hemisphaerica)
AAAAAATGTGGGAGAAATGGAATGCAGTTTCGACTCGTTTCCAAGAATTT
ATCCTTCAGGGAATCTACAAAGATATCATTGTCTGCTAATTATATAGATG
AAAATCCTCTCTAAATTTAGTAGCTAAATGATACCTAGATGTTGAACCAG
TTTGCATAGGTACtttctgaattatttttactttttggattGGATTCAAc
tgatgtttgttttgatttttgattgataACGCAACATGTCTCAAACATTA
ACATCTATCCAAGCTCTAGAAAATGGAAACCATTTTGATAATGTCACATT
CAGCAAAGGTGAAGAGGAGGGACCAAAAGTCACTTTTCGCAACAATAGTT
TTTATATTGTGTCAGCTCTTCTCTTTCAAGAAGATAAAGTTCTTTTGGTC
AGTGAAGCAAAACATGATGGAAAATGGTATCTTCCTGCTGGGAAAGTCAA
GTATCAAGAGAGTTTAAAAGTAATATATTATAGTAAATGTATCAAATCAG
CAGCCAAACTCCTGTGTTGTATATCAGGATTTAAAAATTAGGCTAGTCCA
GTccgggaaatcctctcaattgcacgcttatgttccgaggccgtaagcgc
gcaattgcacggttatcaaaaggcagaatttttaagcgtgtaatCATACG
CTTAtagaaattgttctgaaacgggcaGTAAgcggtaagcgtgcaattgc
accctttattattctgacacgcaattccttccgaaagctctgttgaattt
caaaagcctagggcagttttactcaaaatttatcgtagaagaagattccg
taaaaatggattgaccgttaaaccatgccttcgcccgaattagagaattc
tgaaccccttgaaatcactaagcaatttcaactgggcgggagcgggcgta
aattataaccatgcaattgcgcgcttacgccctcggaacataagggtgca
attgagaggatttcccagactgtagTCTTTTATCTTTCTCTTTGCAACAG
TACAATAgacaaaatagacctttttgcctttccatccgccaagCCATAAA
ATTATGTataaatcaggtttgttttgatttaactttataTTTTCATGACC
AGACAAGTAATTTATTTGAGGGCtgatgcatgttagcctccactgataca
AATTAAAATTACCCGAATCTCACGGTATGGCagatggaaaggcaaaaagt
tgacacaacacattgacaactAATCCCTGTGAAAAGTTTATTTCAAAATC
TGctacaaaaacgaaagtggtctcttctactgattgcctCATGGTCCTCC
TTTGCagactgtttatcaaattttccaCCAATaagattgctgaatttcaa
gtAGCCCTTCTTTTCAGTGAGTACGTTGCCCTTCAGTGCCTTGCAATTCT
GGAgtgtaaaacttttaaaataaaatttcaaactcactttttttgttttt
ttttgaaaaaatctgccaTTATTATGAATCACTTGGCCGAATGAAATATC
TTTTCAGcttctttttaattttgtgtTTAAAATTATGTCATGAAAAAAGG
GTGAACAATTGAACAAAAACAACCCAATAGATTTTGAGTTATTTGTAAGG
CAAGACTACCCAAAAATCACTATTTCAGACCTCGCATTttgctttttaaa
ttttaaaaagtaagaCGTGATAGggtttatcattcaaactgttcaaaaac
atagaaaataactcacaaagttCCAAGTTCAGTTTATCATTTTCCAATCA
GAAAAAATATGAATTGGAGACTGAATGTGCATTTCACTACTACTGTAAAA
AAGCCACAAACATCTcacaacaatgaaaatacaaaatgcATTGATCTTTT
TTTCCTGCCTCCTGTCACTTAGTCAATGAATCCAGAATTTTGACTGTTTC
AAGTTTTAATATTGAGGAAGTAGCAGGAGCAAGAAATACCCTTTTAATAG
TAGGACAAAAGGCCCATAAAGAAGcttatgaaacaaaaataaatagctTA
ATCTGTTCATTTGGagtgttttgtttttctcttgaCCTCTCAACTCTCAC
TTgctatttgaaaaataaaataggaCAGAAAATGGGATTCTTTCTTGAAG
TTCTAttaatctttttattcattttatcattcttgTTAACACTTTCAGAA
TGCCTTCAAAAGGGAACTGTTGGAAGAGAGCTCATACAAAGGAGAGCCTG
ATCATCTTCTTAGTATTAATGCCGGACCTGGTGGTTGGTTTCGCTTTAAT
TTCATTGGTCACCAAACAGGAGGACATTTAAAAACACCTGCTGAAGCTGA
CAAAGACACTTTAGAGGCAAGATGGTTTCCATGTTCAGAAATCTTCAATG
GAGATCTTAATTACAGGTATAAAAACGATGACGTCTTAGGAAATCATATT
CATGGTTTCATTCTGTTTCATCCCGCTTTTTAACCCCCATCAAAAGGTTA
AATCCCTCCCATTAGCCTTAGCCCCTCCATGACTAAAAATTATAACTTGG
GGGCCCATTACAGGTCTTTGTCATTTTTTGCACTTATATCCTAAATAAAA
ATGTAAGAAACAGCATATAATAATTTTAGGAATCTTGCTTTATACATAAT
ATGTATAATATTGTgtgaatcaaaagaaaaaactacACTACTATCAATAt
gttaaaatgtttaaaaatggttgaaaatagaaaataccAGGTGAAAATac
caaatgtcccaaagtgcttggagttttgatatttagaaagtagatatcct
aacttaaaatttgagccatcactttttaaatttgaccaacttgttctcta
cttatgagcttttaaagtcaaaattcacttttcgaaaagtgtaaaaaaca
cgtaaaaaacaggtattaaattcatgcaatcaattagaaaatcacttaca
aattgacttatttaacaaGTTTTaggacattaataattaataaaaacacc
tttgaaagtaatttttgtttaaacaagactagtttttataaaaattggcg
ctttcatagatttttttcgaaaactgtatatcaaaaacgtctaaaaatac
caaatttgataccccttttttagttggtcaaatttaaaaagtgatagctc
aaattttaagttaggatatctactttctaaatatcaaaactccaagcact
ttgggacatttgttcggcctCAAGACGTCGGGAAACGTCTGAACTTTTTC
GTGGGTCACCCGGTACTTATACACAAAAATTTACCCCCCATTATAAATGT
CTCCCCCATCAGCCTTAGTCCCCCCagtatttgaaaaataaaaaaatact
tgcccaggcaaaaataaaaatatgtagtgtttccggaatgctgGTGAAGG
AAAAAGGCTCTCATGcagccggccggaaaaaaaaatttatttatttggta
tttttgatctatttttttaagtatttttaatcaataaatcgcataacatg
tttttttttgctacttttgataacttaagatcattgaaatagaactttaa
agataactttaatgtacaaacagtatgaagtaagccctgaaaacTAATGT
ATCAAATACTAACGAACagaacttgatttacaagcaggaatatctaacca
aacgacatttgatagcttgaaagctcaacttgattttctttatgatgaac
catatagatgaaATGTCAAAATGCCAGAAAAACAGATTTTTGggcttttc
ttgagattttatcaCCAACAATAAGCATTGCTTGAAATGTGATGGAGTTG
GATTTGTCATGTAATTGGATTAAAACATTAATGATAGCAATGCAATTTTT
GTAGCTGGAACTATCTAACTATTTATATGATACCTAAATGTGATACTTTC
TTGGGCAATGATTATCTTAGTTCAAGGTGTTTCCTGTAAATGCTATAAGC
TATTCATCATATTTGAtgtaaaaatgtgaaaataaatGCTTGTGTtgtat
ttattaatttttttttctcaagggCCCAAGATATGTTTGAGGTGATAAAA
GATGGTATACTTTGGAATCAACAAAATGGTGCACTACAACGGGAAAAGTC
TATCATATTGGAAAATTCATTCAACAGCTTCTGCTTGAGACCATTAGCTT
TTGATTTGAATGGGGCTAAgtatgaattttttcttttctctttatgCTCG
TCATTGTATTTTGCATGTATCcacaatgtttttaaaaatagtttATACTT
TTATACAACTATTTCTCCAAACATGGGAAACTTGACTTTACATTTTGTTG
TTCCTCGAGAATCATTCTGagccaaaaaaatcatttttttcaatctgaAC
ATTTACAAACAACTTAGGAAAGAAATTGAACCTTTTATCAATATCAATTT
TGATACAAATGAAAACCTGCTTCTATTAAAGTATTTATTTAAGTTTTTGG
TGGTCTGCCGCAAAAAATCAGTTCGGTGGAATACAGTTTTaatccaaaat
ttggaaaacccGGGTcgggtagagcattcgccttacaatctaaggttTGT
GGGTTTGATCCCTGGTCACTGTCAACTCAGCGGATGattagcttagattg
ggtaatctgatctaagcGGTAAGTTAGTGGAGCTGTGAGTGTGGCGcccc
acctcagcattcgatctctcagggctagcgcaaatagaaaaggggataga
ttCCCTCACTCCTGGTTCCAACGACAGCCACctgatgaatatacttactt
acttacttacttaaaatTATAATTTATGATATGTTGTAATGAGTTCTTAT
TCTTTATTCAGTGTGCAATTAGCAATTCATCATGAAACTGGAAAAGTTCC
GCTCATAAGGATGGGGATGTACTATCAAAAAGTTGTTacagattttttcc
aaaaaagtggAATACAAGTCCAGGTTTTGGGAATTTTAGCTGTAGAGCAT
TCACCAAGAGAAGATAGTTGGGATGGGTACTGCTTGAATGTTATTTGTAA
ATTGGATCGTGAAAACTCTACAGGAATGAGCAATTTCAAATGGATTGATT
TGGATTCAAACCTTTCATCTGCAATCAACAAAATCATTGGCACACAATCA
TATGTTTGGGCTTTTAAATAAGCAATTTcgcttttgtttttttactgtTC
TCATTGAGTTTTTAGGTCATTTCAACTATTCTGGGTCTGATTTCAATGGT
AACAACGTTTCAGCATTATTTTCCTTCACATTTTACAAACCCAAACTATC
TTCTAGCTAGTTTACTAAAACAGAAACTCAACCTGTTTCCTGAGGGTCAA
CCTTTTTAACCAAATTAGTTGATTGATTTGTTAAAAACAACCTTGAATTC
TGAAACCTAGGGGTTTACAACTGAAATCTTTGTTATCTTTTCACATCGGT
GGCGGGTCTacctaaaattttttgattttgattttatttttttaagaatt
tgaaatgtttttaaatttgtttatttattgttAATATTTTCATACCTGGC
TTTTTTAAATTGTAGCTCACTCACAAATTACTTAAAAAGTGATAATTGTT
GTTTTGTGCTTGTGATTTTCTGTTGATTATTAAT Coding sequence (CDS) from alignment at sc0000570:19206..24739+ >TCONS_00026369 ID=TCONS_00026369|Name=TCONS_00026369|organism=Clytia hemisphaerica|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000570:19206..24739+ (Clytia hemisphaerica)
ATGTCTCAAACATTAACATCTATCCAAGCTCTAGAAAATGGAAACCATTT
TGATAATGTCACATTCAGCAAAGGTGAAGAGGAGGGACCAAAAGTCACTT
TTCGCAACAATAGTTTTTATATTGTGTCAGCTCTTCTCTTTCAAGAAGAT
AAAGTTCTTTTGGTCAGTGAAGCAAAACATGATGGAAAATGGTATCTTCC
TGCTGGGAAAGTCAAGTATCAAGAGAGTTTAAAAAATGCCTTCAAAAGGG
AACTGTTGGAAGAGAGCTCATACAAAGGAGAGCCTGATCATCTTCTTAGT
ATTAATGCCGGACCTGGTGGTTGGTTTCGCTTTAATTTCATTGGTCACCA
AACAGGAGGACATTTAAAAACACCTGCTGAAGCTGACAAAGACACTTTAG
AGGCAAGATGGTTTCCATGTTCAGAAATCTTCAATGGAGATCTTAATTAC
AGggCCCAAGATATGTTTGAGGTGATAAAAGATGGTATACTTTGGAATCA
ACAAAATGGTGCACTACAACGGGAAAAGTCTATCATATTGGAAAATTCAT
TCAACAGCTTCTGCTTGAGACCATTAGCTTTTGATTTGAATGGGGCTAAT
GTGCAATTAGCAATTCATCATGAAACTGGAAAAGTTCCGCTCATAAGGAT
GGGGATGTACTATCAAAAAGTTGTTacagattttttccaaaaaagtggAA
TACAAGTCCAGGTTTTGGGAATTTTAGCTGTAGAGCATTCACCAAGAGAA
GATAGTTGGGATGGGTACTGCTTGAATGTTATTTGTAAATTGGATCGTGA
AAACTCTACAGGAATGAGCAATTTCAAATGGATTGATTTGGATTCAAACC
TTTCATCTGCAATCAACAAAATCATTGGCACACAATCATATGTTTGGGCT
TTTAAATAAATGTCTCAAACATTAACATCTATCCAAGCTCTAGAAAATGG
AAACCATTTTGATAATGTCACATTCAGCAAAGGTGAAGAGGAGGGACCAA
AAGTCACTTTTCGCAACAATAGTTTTTATATTGTGTCAGCTCTTCTCTTT
CAAGAAGATAAAGTTCTTTTGGTCAGTGAAGCAAAACATGATGGAAAATG
GTATCTTCCTGCTGGGAAAGTCAAGTATCAAGAGAGTTTAAAAAATGCCT
TCAAAAGGGAACTGTTGGAAGAGAGCTCATACAAAGGAGAGCCTGATCAT
CTTCTTAGTATTAATGCCGGACCTGGTGGTTGGTTTCGCTTTAATTTCAT
TGGTCACCAAACAGGAGGACATTTAAAAACACCTGCTGAAGCTGACAAAG
ACACTTTAGAGGCAAGATGGTTTCCATGTTCAGAAATCTTCAATGGAGAT
CTTAATTACAGggCCCAAGATATGTTTGAGGTGATAAAAGATGGTATACT
TTGGAATCAACAAAATGGTGCACTACAACGGGAAAAGTCTATCATATTGG
AAAATTCATTCAACAGCTTCTGCTTGAGACCATTAGCTTTTGATTTGAAT
GGGGCTAATGTGCAATTAGCAATTCATCATGAAACTGGAAAAGTTCCGCT
CATAAGGATGGGGATGTACTATCAAAAAGTTGTTacagattttttccaaa
aaagtggAATACAAGTCCAGGTTTTGGGAATTTTAGCTGTAGAGCATTCA
CCAAGAGAAGATAGTTGGGATGGGTACTGCTTGAATGTTATTTGTAAATT
GGATCGTGAAAACTCTACAGGAATGAGCAATTTCAAATGGATTGATTTGG
ATTCAAACCTTTCATCTGCAATCAACAAAATCATTGGCACACAATCATAT
GTTTGGGCTTTTAAATAAATGTCTCAAACATTAACATCTATCCAAGCTCT
AGAAAATGGAAACCATTTTGATAATGTCACATTCAGCAAAGGTGAAGAGG
AGGGACCAAAAGTCACTTTTCGCAACAATAGTTTTTATATTGTGTCAGCT
CTTCTCTTTCAAGAAGATAAAGTTCTTTTGGTCAGTGAAGCAAAACATGA
TGGAAAATGGTATCTTCCTGCTGGGAAAGTCAAGTATCAAGAGAGTTTAA
AAAATGCCTTCAAAAGGGAACTGTTGGAAGAGAGCTCATACAAAGGAGAG
CCTGATCATCTTCTTAGTATTAATGCCGGACCTGGTGGTTGGTTTCGCTT
TAATTTCATTGGTCACCAAACAGGAGGACATTTAAAAACACCTGCTGAAG
CTGACAAAGACACTTTAGAGGCAAGATGGTTTCCATGTTCAGAAATCTTC
AATGGAGATCTTAATTACAGggCCCAAGATATGTTTGAGGTGATAAAAGA
TGGTATACTTTGGAATCAACAAAATGGTGCACTACAACGGGAAAAGTCTA
TCATATTGGAAAATTCATTCAACAGCTTCTGCTTGAGACCATTAGCTTTT
GATTTGAATGGGGCTAATGTGCAATTAGCAATTCATCATGAAACTGGAAA
AGTTCCGCTCATAAGGATGGGGATGTACTATCAAAAAGTTGTTacagatt
ttttccaaaaaagtggAATACAAGTCCAGGTTTTGGGAATTTTAGCTGTA
GAGCATTCACCAAGAGAAGATAGTTGGGATGGGTACTGCTTGAATGTTAT
TTGTAAATTGGATCGTGAAAACTCTACAGGAATGAGCAATTTCAAATGGA
TTGATTTGGATTCAAACCTTTCATCTGCAATCAACAAAATCATTGGCACA
CAATCATATGTTTGGGCTTTTAAATAAATGTCTCAAACATTAACATCTAT
CCAAGCTCTAGAAAATGGAAACCATTTTGATAATGTCACATTCAGCAAAG
GTGAAGAGGAGGGACCAAAAGTCACTTTTCGCAACAATAGTTTTTATATT
GTGTCAGCTCTTCTCTTTCAAGAAGATAAAGTTCTTTTGGTCAGTGAAGC
AAAACATGATGGAAAATGGTATCTTCCTGCTGGGAAAGTCAAGTATCAAG
AGAGTTTAAAAAATGCCTTCAAAAGGGAACTGTTGGAAGAGAGCTCATAC
AAAGGAGAGCCTGATCATCTTCTTAGTATTAATGCCGGACCTGGTGGTTG
GTTTCGCTTTAATTTCATTGGTCACCAAACAGGAGGACATTTAAAAACAC
CTGCTGAAGCTGACAAAGACACTTTAGAGGCAAGATGGTTTCCATGTTCA
GAAATCTTCAATGGAGATCTTAATTACAGggCCCAAGATATGTTTGAGGT
GATAAAAGATGGTATACTTTGGAATCAACAAAATGGTGCACTACAACGGG
AAAAGTCTATCATATTGGAAAATTCATTCAACAGCTTCTGCTTGAGACCA
TTAGCTTTTGATTTGAATGGGGCTAATGTGCAATTAGCAATTCATCATGA
AACTGGAAAAGTTCCGCTCATAAGGATGGGGATGTACTATCAAAAAGTTG
TTacagattttttccaaaaaagtggAATACAAGTCCAGGTTTTGGGAATT
TTAGCTGTAGAGCATTCACCAAGAGAAGATAGTTGGGATGGGTACTGCTT
GAATGTTATTTGTAAATTGGATCGTGAAAACTCTACAGGAATGAGCAATT
TCAAATGGATTGATTTGGATTCAAACCTTTCATCTGCAATCAACAAAATC
ATTGGCACACAATCATATGTTTGGGCTTTTAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026369-exon-sc0000570-1491911889:19206..19674 | TCONS_00026369-exon-sc0000570-1491911889:19206..19674 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1510915933:19206..19674 | TCONS_00026369-exon-sc0000570-1510915933:19206..19674 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1575043694:19206..19674 | TCONS_00026369-exon-sc0000570-1575043694:19206..19674 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1491911889:21354..21571 | TCONS_00026369-exon-sc0000570-1491911889:21354..21571 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1510915933:21354..21571 | TCONS_00026369-exon-sc0000570-1510915933:21354..21571 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1575043694:21354..21571 | TCONS_00026369-exon-sc0000570-1575043694:21354..21571 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1491911889:23178..23324 | TCONS_00026369-exon-sc0000570-1491911889:23178..23324 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1510915933:23178..23324 | TCONS_00026369-exon-sc0000570-1510915933:23178..23324 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1575043694:23178..23324 | TCONS_00026369-exon-sc0000570-1575043694:23178..23324 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1491911889:23967..24739 | TCONS_00026369-exon-sc0000570-1491911889:23967..24739 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1510915933:23967..24739 | TCONS_00026369-exon-sc0000570-1510915933:23967..24739 | Clytia hemisphaerica | exon |
| TCONS_00026369-exon-sc0000570-1575043694:23967..24739 | TCONS_00026369-exon-sc0000570-1575043694:23967..24739 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000570 | supercontig | sc0000570:19206..24739 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000086 | NUDIX_hydrolase_dom |
| IPR015797 | NUDIX_hydrolase_dom-like |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016787 | hydrolase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0016787 |
hydrolase activity |
Blast
BLAST of TCONS_00026369 vs. Swiss-Prot (Human)
Match: NUD18 (8-oxo-dGDP phosphatase NUDT18 OS=Homo sapiens GN=NUDT18 PE=1 SV=3) HSP 1 Score: 116.316 bits (290), Expect = 1.125e-28 Identity = 88/303 (29.04%), Postives = 142/303 (46.86%), Query Frame = 2
Query: 233 NMSQTLTSIQALENGNHFDNVTFSKGEEEGPKVTFRNNSFYIVSALLFQE-DKVLLVSEAKHD--GKWYLPAGKVKYQESLKNAFKRELLEESSYKGEPDHLLSINAGPGGWFRFNFIGHQTGGHLKTPAEADKDTLEARWFPCSEIFNGDLNYRAQDMFEVIKDGILWNQQNGALQREKSIIL--ENSFNSFCLRPLAFDLNGANV-----QLAIHH----ETGKVPLIRMG---MYYQKVVTDFFQKSGIQVQVLGILAVEHSPREDSWDGYCLNVICKL--------DRENSTGMSNFKW 1066
++ L S+ A + + + GE P V R N Y+V A+ E D+VLL+ EAK + G WYLPAG+++ E++ A +RE+ EE+ EP+ LLS+ W RF F+ TGG LKT EAD ++L+A W+P + + RA D+ +++ + QQ +IL E + C R +A + V + + H G P+ + G M +++ + + V++ G+L ++H R+ S DG CLNV+ + D NF W
Sbjct: 5 GLAGALASVLAGQGSSVHSCDSAPAGEPPAP-VRLRKNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPT---PLRAHDILHLVELAAQYRQQA-----RHPLILPQELPCDLVCQRLVATFTSAQTVWVLVGTVGMPHLPVTACGLDPMEQRGGMKMAVLRLLQECLTLHHLVVEIKGLLGLQHLGRDHS-DGICLNVLVTVAFRSPGIQDEPPKVRGENFSW 297
The following BLAST results are available for this feature:
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