TCONS_00026369-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00026369-protein
Unique Name	TCONS_00026369-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	302

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00026369-protein ID=TCONS_00026369-protein|Name=TCONS_00026369-protein|organism=Clytia hemisphaerica|type=polypeptide|length=302bp
MSQTLTSIQALENGNHFDNVTFSKGEEEGPKVTFRNNSFYIVSALLFQED
KVLLVSEAKHDGKWYLPAGKVKYQESLKNAFKRELLEESSYKGEPDHLLS
INAGPGGWFRFNFIGHQTGGHLKTPAEADKDTLEARWFPCSEIFNGDLNY
RAQDMFEVIKDGILWNQQNGALQREKSIILENSFNSFCLRPLAFDLNGAN
VQLAIHHETGKVPLIRMGMYYQKVVTDFFQKSGIQVQVLGILAVEHSPRE
DSWDGYCLNVICKLDRENSTGMSNFKWIDLDSNLSSAINKIIGTQSYVWA
FK

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_014806	XLOC_014806	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00026369	TCONS_00026369	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000086	NUDIX_hydrolase_dom
IPR015797	NUDIX_hydrolase_dom-like

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.90.79.10		coord: 33..176 e-value: 5.8E-19 score: 67.8
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 42..150 e-value: 2.0E-12 score: 47.2
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 37..160 score: 10.205
IPR015797	NUDIX hydrolase domain-like	SUPERFAMILY	55811	Nudix	coord: 36..165

Blast

[Close]

BLAST of TCONS_00026369-protein vs. Swiss-Prot (Human)
Match: NUD18 (8-oxo-dGDP phosphatase NUDT18 OS=Homo sapiens GN=NUDT18 PE=1 SV=3)

HSP 1 Score: 116.701 bits (291), Expect = 1.777e-30
Identity = 88/302 (29.14%), Postives = 142/302 (47.02%), Query Frame = 0

Query:    1 MSQTLTSIQALENGNHFDNVTFSKGEEEGPKVTFRNNSFYIVSALLFQE-DKVLLVSEAKHD--GKWYLPAGKVKYQESLKNAFKRELLEESSYKGEPDHLLSINAGPGGWFRFNFIGHQTGGHLKTPAEADKDTLEARWFPCSEIFNGDLNYRAQDMFEVIKDGILWNQQNGALQREKSIIL--ENSFNSFCLRPLAFDLNGANV-----QLAIHH----ETGKVPLIRMG---MYYQKVVTDFFQKSGIQVQVLGILAVEHSPREDSWDGYCLNVICKL--------DRENSTGMSNFKW 277
            ++  L S+ A +  +     +   GE   P V  R N  Y+V A+   E D+VLL+ EAK +  G WYLPAG+++  E++  A +RE+ EE+    EP+ LLS+      W RF F+   TGG LKT  EAD ++L+A W+P + +       RA D+  +++    + QQ         +IL  E   +  C R +A   +   V      + + H      G  P+ + G   M   +++ +      + V++ G+L ++H  R+ S DG CLNV+  +        D        NF W
Sbjct:    6 LAGALASVLAGQGSSVHSCDSAPAGEPPAP-VRLRKNVCYVVLAVFLSEQDEVLLIQEAKRECRGSWYLPAGRMEPGETIVEALQREVKEEAGLHCEPETLLSVEERGPSWVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPT---PLRAHDILHLVELAAQYRQQA-----RHPLILPQELPCDLVCQRLVATFTSAQTVWVLVGTVGMPHLPVTACGLDPMEQRGGMKMAVLRLLQECLTLHHLVVEIKGLLGLQHLGRDHS-DGICLNVLVTVAFRSPGIQDEPPKVRGENFSW 297

The following BLAST results are available for this feature:

BLAST of TCONS_00026369-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00026369-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
NUD18	1.777e-30	29.14	8-oxo-dGDP phosphatase NUDT18 OS=Homo sapiens GN=N...	[more]

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TCONS_00026369-protein (polypeptide) - C. hemisphaerica