|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026285 ID=TCONS_00026285|Name=TCONS_00026285|organism=Clytia hemisphaerica|type=transcript|length=304bp
CTTTCGCTTGATTTATTAAACATTTTAGTATACAGTGCTTTGAGtgagtt
aatttttcataaaaatgacaCAATTACTGATAATTGATGACGAAATGCGT
CGAATGAGGCATTCTCGACCGACTACTCCTATATCACCCAGTTTTGACAA
GCTGGAGAAGAACTGGTTTCGAGCAGCATTGAGATGTGATCTTGAGCAAT
TGAAAAGATATTACGCCAAAGATCATCTTTTACTTGATAAGAAAGACAAT
TTCACTGGGTTTGTCATCAGCGAAAAGGAAAATCTTCAACCTTCAACCGG
CTTC Run BLAST on NCBI transcript from alignment at sc0000566:182776..184398+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026285 ID=TCONS_00026285|Name=TCONS_00026285|organism=Clytia hemisphaerica|type=transcript|length=1623bp|location=Sequence derived from alignment at sc0000566:182776..184398+ (Clytia hemisphaerica)
CTTTCGCTTGATTTATTAAACATTTTAGTATACAGTGCTTTGAGtgagtt
aatttttcataaaaatgacaCAATTACTGATAATTGATGACGAAATGCGT
CGAATGAGGCATTCTCGACCGACTACTCCTATATCACCCAGTGTAAGTTC
TGGTTTTTAAATTTCCCTGGATTCACCCAAGTTTTAAATCGGTAGCTCTT
TATTTACCTTTATATCAATGATTCTTATTCAGGATTGTTTGCAAAATCAT
CTAATTATCAATTTACGGTTCCTGACTAATATTGTGACCATTTCTTGGAA
AATCCTTCTACCTCTTCTAATTTTAATGTTGATATGTGGATTTTGTGGGT
GTGCGTGGCTTCTTCCACATTAGCGAATTtatgtttctttgtttttctgc
gACAGTTGCAGTAAGGCCctaatttgtctagatcctgattaATTCTGGAC
GACGGTAAATAAGCACTTTCATCGTCCTCCATTTTGTGTGTTAGAACTAC
CGGTTATAACAAATGGCTTCAGTCACTCCGCCGTCCTAAAAAGTctaaat
acataaactcaccAATATTTAGCCAGGGACTGTAGTCATCTAATATGGAC
GGACATTTACGTAAGGTTAGGTTAATTTTGACTTTTGTGTGTGCTAGCTT
TGTTGGGAAATGATCTTTCCCTATGCACATCCCTATCTCATGTAATGGGC
AAGAAGTTACTAAAGGCCCCCCAGGCGGTTTGTATGATAGGGATTTTTTT
CTAGCGTGAtcacgtgatttggaaattttttctttcgtgattgcgtgatc
agagaTCAAAACGTCATCgtgattttaaagatttttgaacTGTGttgcgt
gattgggacttttttcaaagggatgcgtgatcatccaattttttttcctt
atttgcacgatcgtgattgaagacaaaaaattgcatgatcagagttaccg
ctgggggAGTGGGGGAATATATCAGCATTTgttattataaacaaaaaata
agttttcCTATCCAATTAGCTTTTGCATggtgaaaaatattcatttcgAC
TATTCGACTTTTATTTCCAGTTTGACAAGCTGGAGAAGAACTGGTTTCGA
GCAGCATTGAGATGTGATCTTGAGCAATTGAAAAGATATTACGCCAAAGA
TCATCTTTTACTTGATAAGAAAGACAATTTCACTGGGGTGagtatttcaa
actttttacttcACAGTTTTCATATGCGGTTTTAGAGCATGTCGAACTTT
TTAGATGAAGAGATttataattgtaatttcattgtcttttaacgatgAGC
GTTGCTCTTCTTCGCAtctttccgacgtacttgctttATTGTCTTAAATA
CGCCAGTGGTCTTAGTTCTAAGTGTTGCAATCCATTCTAATCCACAAAgt
acataacgttgtttcaacgctcATATATGACGTTTTATGTATTGACGCAG
TGTTGAGACTTTGGGATAGTCCAACTGTTACAGCTTCCTAAACACAAATT
CTGATCCAACGCTATTTATGGGGAAGGGCTAATTTAGAACTGTTTTCAGA
ATTGAACTTTCAAAAACCTCTGCTTTAGTTTGTCATCAGCGAAAAGGAAA
ATCTTCAACCTTCAACCGGCTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026285-exon-sc0000566-1491911889:182776..182917 | TCONS_00026285-exon-sc0000566-1491911889:182776..182917 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1510915933:182776..182917 | TCONS_00026285-exon-sc0000566-1510915933:182776..182917 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1575043694:182776..182917 | TCONS_00026285-exon-sc0000566-1575043694:182776..182917 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1491911889:183846..183962 | TCONS_00026285-exon-sc0000566-1491911889:183846..183962 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1510915933:183846..183962 | TCONS_00026285-exon-sc0000566-1510915933:183846..183962 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1575043694:183846..183962 | TCONS_00026285-exon-sc0000566-1575043694:183846..183962 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1491911889:184354..184398 | TCONS_00026285-exon-sc0000566-1491911889:184354..184398 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1510915933:184354..184398 | TCONS_00026285-exon-sc0000566-1510915933:184354..184398 | Clytia hemisphaerica | exon |
| TCONS_00026285-exon-sc0000566-1575043694:184354..184398 | TCONS_00026285-exon-sc0000566-1575043694:184354..184398 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000566 | supercontig | sc0000566:182776..184398 + |
Blast
The following BLAST results are available for this feature:
|
