TCONS_00026272 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026272
Unique NameTCONS_00026272
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2252

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026272 ID=TCONS_00026272|Name=TCONS_00026272|organism=Clytia hemisphaerica|type=transcript|length=2252bp
GCTATTACAACCTGCACCATTGTTGGAAGATTCAACCGTGGTACTTCGAa
ataagatgaaaaatgaatttaattcTAATAGAAATTCTCGAGCAGATTTG
GAGGATTTTTGGAACGAAATCACAACGACAAAAAGCGAAGAAaatattga
agatgaaaaatcttttaatatTGATGTTGATGTCAAAGAAAAACAACACG
AAATTGAAAGTGCTATTGAAGAGGTCCTATCACCAAAACAGTCAACAATA
CAACCTTTGGAACTAACAGATAATGCTGTCATCAAAAGacgaaagaagaa
agattttgACTCTAATCGCAATTCTCGAGCAGATTTGGAGGATTTTTGGA
ACGAGATCACAACgacagaaaatgaagaaaaaattaaagatgaaaaatct
tttgatattGATGTTGATGTCAAAGAGAAACAACACGAAATTGAGAGTGC
TATCGAAGATGCTACCTCACctatgtttaaaCTCTTTCCTCCATTACTGG
ACACTGAGAGAGAAGAGACTTTTTACCGAGCAGACGTGGATGATGTCGAA
CAGCAGGCACAAGTTAGTCTTCTTGATGTATCTGGGGAAAACTCGATCAT
TCGacggaaaaagaaaaaagatgccAACGAGTCTCAAAGAAATTCTCGAG
CCGAAGTAGAGAATTTTTGGAACGAAATTGCAAATGATGGCAAGCCTACC
GTTGACAATGACGCGCCCTCTCAACCAAAAGTCATCATTGTGGATTCATT
GGATGATAATTCTCTTGGTCTACCAAGTAGAAGACGACCGTCAGAGTTAC
GAAATTCGCAAGcagaaattgagaaattttggACGGAGGCGCGAATCAGA
ACAGCTGCAGAAAAGTTAGAATCTGAAGAAACGATGACTGTTGTCAAGCG
AAGAGCAAGTGAAGGAGATGTGCTTCGTGATGATGTTCGAAATTCTCGAG
CAGATTTGGAGGATTTTTGGAACGAAATCACAACaacagaaaatgaagaa
aatattgaaaatgaaaaatcttttgatattgatgttgatgttaaagaaaa
acaacagaACGTTGACGTTGAACCACCGCAAGATAAAAGTTTATTGGATG
TTCCAGTTCGTAGAAGACGGTCGGACTTTAGAAACTCTGACGCAGACATT
GAGAGATTTTGGACTGAAGCACATATCAGAACTGCTGCAGAAAAATTGGC
AACTGAAGAAACGGCTGTTATCAAAAGAAATAAGACGAAGGAAGATGCTG
GCGAATCCAAGAATGATCGTGGTAAAATACGGAACTCGCGGCTTTTGGAT
GAAGATTTTTGGAGTTCGTTTgactttgaaaatattgaagaagcggaaag
aaaattcaaagatATTGAAAACGATAATAATAAGGTATCACCGAAACAGT
CACAAAAGCAAAGTGTTGGGAAACTGAAAGATGACATTCCCTTGGAAAGC
GATGGCGACGGTGAATCATCTCTAGACGAATCACCCACAAACTCTTACAT
GCAACGTTGGGATGACGATGATAACAGTCAGATCGATGATAATGATAATG
TAAGCGAAATTTCGTCCATTTGCACAGATGCTACTGATAGTTTAAAGAGA
AGAAAGTCGTTTGAAAACAGAAATTCGCGAGCTGATTTTGACGACTTTTG
GAGTAACATTGGAACAACCTCTGATGAGGCGGTATCTTCAACATATAATT
CATCAAGTTTCGAAAGCTCTTCAACAGCTATTAAcgatgatgaagaagaa
gaaaatgatgaaaatgaaaaattcgtTGAAAATGGACAAGAGCTTGTTGA
GCAGAAGGATGCTGAACTTAGAGAGCATGTTGACGATGGACAGATATATA
TCCCAGATACACCAGAACTTgttgaaaatgaacaaaaagatGTTGAACTT
AGAAAGTTTGTTGACGATGGACAGATATTTGTTGCAGATACACCAGAACT
TTTTAAGAATGAACACAAACTTGTTGAAAATCAATCGGAAAGTGTTGAAA
AGTACAAAATAGTTTTGAGTTCAAATGATGAAAGTGACGACGAAGATGAA
ATAGTTGTTGATGATTTTAGCGTTGGAAGTGTGGTCGAAAGTGGTGTTCA
ATTAGTTTTGACCGAACAAAGTTCTGTTGAGAGTGAAGGGAAATATGCCG
ATGCTGACCATAGCGGTGTTGAAGACAATTTGCAGCAGGAATCTTCAAAG
AAGTTTGTTGAAGATGAAatgattgaaattgaaaatgcaCAAACCAAAAT
TG
Run BLAST on NCBI

transcript from alignment at sc0000566:113301..129073+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026272 ID=TCONS_00026272|Name=TCONS_00026272|organism=Clytia hemisphaerica|type=transcript|length=15773bp|location=Sequence derived from alignment at sc0000566:113301..129073+ (Clytia hemisphaerica)
GCTATTACAACCTGCACCATTGTTGGAAGATTCAACCGTGGTACTTCGAa
ataagatgaaaaatgaatttaattcTAATAGAAATGTAAGTACATTGAAT
TACTGTTTTAGAAGCTACACACTTCTATATATTAGTAGCGGGGTCTGTGG
GTGTTCTCTCACTGACTGGAAAAAAATAGTGCATGATCGCTtgagtaccg
tgaagtcgggtaacatgcatcagtggagggaaacttgcatagccatcaaa
tgactgaccaatcaaagcaccaaaatttcaaaacaaatgaactacgcagc
accgctcgcagctctactctaccatttttgttttgatttaactttgtatt
ttaatgaccagctagttcattcatttgagggctatgcatgttagccttca
ctgatgcaagttatccgATCTCCCGGTGTTTTAAGCTAATTTCAAGCGCC
AACAATTTTAGGGAAGAGAGTAATTAACTTTGTAATTTATTAACGAGGAA
CAAAAGCCCGTCATAAGGATAAGTTGacaaaaaacaatcaatgtTCCTTC
AATTCAATGATATGATAATCCTTCTCATATTTAATAGAAAAGTattctaa
aattttccttttcagtCTCGAGCagattttgaggatttttggAACGAAAT
CACAGCgacagaaaatgaagaaaaaaatgaagatgaaaaatcttttgata
ttGATGTTGATGTTAAAGAAAAACagcaagaaattgaaaatgctATTGGA
GAAGTTTTATCCCCAAAAcaagtaaaaatcattttttttatcagaataat
TCTTTAGAATTATTGTGTCATATTAAAAGCGACTTtaaatacaaataaaa
tggaactacacgcttttttataagaatacactttataagaatgtatatga
taaaaatggtcaaaaaattaaggATATGCTAAcaataccaccatcatgga
attttgctactcaagctaagaatgtcatttttagagcattttcaattata
aattgtcaattacccccaagtaaggctcactcctttcacaaaaaatgcta
tttcatgcttgagacgtatgtagtAAATATTAAATCTAATCTGagttagg
atcctaacctaagaatgctgtaagaatattttaggatgattttcccaaaa
aagttaagaatatccatgatgaaatggatttacaccattcttataaaaaa
gcaagtACGTTGGAGAAGGTTTccttttttctaaaagtttAGTAATGTAT
TACAACATTCGGAAGCATTTTGGAACGTTCGGAAACCAAGATGCTCTGAT
CGAGTAGATCTTTTTAACCTCTGTGCACAAAGGATCGTTTGCAAGCGTTC
CAGGGACGTTAGGGAACTATACTATTTTTTATCAGATTAGTGTTTCTCCA
TTTCATCATgcatattcttaacttttttggggaaaatcatcctaaaatat
attCTCACGGTACTCTTAACAGGACCCAAATTCAACCTAAATTTAACATG
TAATGCATACacgaagcaaaaaaatgtttttttattgaaagattTGATCC
TTACTATTACTGGAGGGATAATGGGAAATGAACAGTCAAAAATGTTCTAC
ATATCGTATTCTTAGGTCCAGTTGCCGatttccatgatggtgatattctt
agcagattcttaatttttttggttaATTTCATCatgatttttcttataaa
aaaatggtGTAAAGAAGAATGTTCAGGGACGTCACAATGTTCTTCCATGC
CATTTATATCTCAAATTGCTTGTGGTGATACTAAAACTAAGCCTAACTCA
AAAACAATGGCAAAAAAGATGCAGAATAAAGCTTGGCTAAGGACTTGATT
AAATTTGAGCAAATTAAACAATAAGAAgtacgaagcaaaaaaaaataccc
CATCGAggtttatgaaaaaaatgttttatcgcATTTCAGTCAACAATACA
ACCTTTGGAACTAACAGATGATGCTGTCATCAAAAGacgaaagaagaaag
attttgACTCTAATCGCAATGTAAGTTTTGAGTTTTTCGAACTTTCTTTT
TAATATCAGTGTTCGCCATCATATTCAAAAAGACCTTTAAGCctggaaat
tcaaaaacaaatcttttaaatcaatcaatatcATCATACACTGAAAGTTT
TAGCGGTTCATTTTAGTACCTTTAGAGGTTCTAATGATCGCGTTTACCTT
TAGATAACAAATTTGTCCCTTTTCGGGAATAGATATATTCCTTTAAGGAT
TAAAATGATACCTTCTGTGGTACGATTTTTAAAAACACCGTTAAGGTAAT
TTTAAAACACCCCGTAGGAATTATTTTGTACCTTTTGAGTGATTTTcggg
atttccaaaaattcgaaagttaNCGCGCTTTGTCTGTCAATCTGACAGGT
CGAAGCTCTCAGTCGCAAATTAGTTAAAGTCCGAATTTTAGTCGCTCGCT
AGATTCTTTATTAACTATTATTTTGCGATGCTGAAGAAATCCAAACAACT
TTTGGGATTGGTCAACTTTCTCCCAAATGTTCCTGCTGCAGAAGATCAAC
ATTCGGTTCAAAAGCATATTGCAACTCTCAAATCACAAACCTATTGCTCT
AAGCAAAAAGAACGACTCGTTTGGAGCTTATNATAGGGGCAGGAAAAAAG
CCTTCGAAAGAATTCTGAAGATCCCTTCAACGCTAAAGGGATCATTATGT
ACCTCTTAGGTATCTCATAAACAATAAAGTATAATAAAATTTATTCATTC
GACGGTATAAAGTAGAGTGTCAAGATTCTCATTCACTCAGTAGAAAGACC
TTGGGATGTCGTTTGAAAAAACTTAAGATTGAAAGGCAAGACCTTGAGGA
GTCTAGCTTGGCATGAACGAGCACGCAAGACAGGTCATGATGAAAGGTCT
TTAATTGAACATTTTATGCTCTGTGTTAGGGAACTGTTATAATCCAAGAC
TCTGAAAGTTATTATTCTAACCGTATTTCCGCTTGAAACCCTTTAAAGCT
CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTTATC
CTGCACGATCGACGAGCAAAACTGATCAAGGATCACATATCCGTCAAAAT
TCTGATTGAAATATACCCAAACCTTGCAAATGGTGAACAGGTATTGAATT
AACTAACGGGGGGGTCCTACAGTCCGGTAGTTggcaaaaaatcgaaaagt
taATATCCGGAGGGGGGCGTATAGGATCCTTGGAATATAATTGAAAGTAA
GAATATAATGAATATGAACAAAAGCTTAAAAATATAACTTTGTTTTTCAA
CAGATCGATATGCTGTTGTTGGAGTAATGACCTTACCGACATTGTTTCGA
GAAGATCCAAAACACTACTACGGAATTGATAACACCCTAACTCCTCGAAT
CAGTCATGCTAACCCTGACATTTTCGACGAACAAGAATTTTTCATCCACC
TCGATGGCATCACTATTGGAAAGTCGAGAGATCCTTTGACGGCACTGACA
TTGATGTACAGTTGCTACTACGTGTTCAACTTAGTATACCCAAAGGAGTT
GCAAAGTTCCTTGGAATTTATCCAGCGTTTCTTGGTAAAAATCGGAGATG
GTAGCAAGCCATCAGGCAAATTAATTACAGcaatcacaaaaataaaaaaa
tatgctgGTTGAAGTTCAACCAATgtatctttttatctttttgacATTAG
CAGTGATCAGTTTTGGCGATGGCTTGCTTCCGTCGCCGGTTTTAACCACG
AAACTCAAATGAATAAATGAGTCCGTGCAGacattttgatatttgaaaat
ttacaaagTTACGCTTCAACTTCTTTTCTTTGAgtttgaatattgaatat
tgaaAGCACTATATTTTCTTGTCAATGTTTTTTTGCCAAATGAAAATTAG
AAACGCTAAAACTGCACTCCTTGaggtttttgtttaaaatgctCCTAGTT
GTAATTTTTGGGATTTGTTGAATTTAATTGCCCTATGAAATAGTTTTATA
CAGAAAAAATCTGCTTTTAGATTGAATAATCTTACTGAATAGTAAATAGT
GTATAGTTATTACGTAATATAGAATCGGTTTTTGTCAAACCTTGTCAATA
TTTATTGAATTATTTAACTTTCTTCTATGTAAAATTCAAtctgcaaaaat
aaaaataggagCTTTGATCTCCCaaatcaactttttgagtttttccttCG
ATAATTATTCGCTTATATTCTAGTGAAGAAATGATAGGAAATCTAAAATA
CCTAGGGGGTAAAAGGAATACCTTTTTCGCACCATCACATCTAAGTNGAT
AGGAGCTTTGATCTCCCAAAtccactttttgagtttttccttCGATAATT
ATTCGCTTATATTCTAGTGAAGAAATGATAGGAAATTTAAAATACCTAGG
GGGTAAAAGGAAATACCTTTTTCGCACTATCACATCTAAGTGATAAAAAA
CAACCCCGAgggtaaaaactaaaaataactTTCGGCACTTTTGAATCCTT
TTGGTGGTGTTTTTAAAGCACGTTAATGGTATATCAGACTAATTTTACCC
TAAAAGGAGCGTTTTGCGGTATCGTTTGAAAACTACCTTTTTAGTGACTT
AAATATACCTTTTTAGTGACTTAAATATACCTTTTGGAGGACTTAAAAAT
TCTTTTGGAAGTATTATTTTCATGCCTCAAAAGGTACCTAAAAGTACCTT
GAAGGTacgaatgaaaaaaataccttacaggtttttttttaatttgtacc
tTTAAAGGGTCGTTTTGCGGTATCGCTAAAATAAACCTTTAAAGGTACTA
AAATGAACCGCTAAAACTTTCAGTGTATNTATACctggaaattcaaaaac
aaatcttttaaatcaatcaatatcATCATATAGTTCGGTGATTGTCCATT
GGACGAAATCACACAATCAACAAAAGATATGGAAATGAGGCTTCAACAAA
ATGAAAGCGAGGCAGCTAAAGAAGTAGATATATCTTATGATTCACAAAAT
AGGATTTTTATGGATTATTTCGTTCTACGTTTTATAAAAGACCTTACCAA
AAGGGCATGAAAACTTCATGTTTCTTGTATTTTCAGTCTCGAGCAGATTT
GGAGGATTTTTGGAACGAAATCACAACGACAAAAAGCGAAGAAaatattg
aagatgaaaaatcttttaatatTGATGTTGATGTCAAAGAAAAACAACAC
GAAATTGAAAGTGCTATTGAAGAGGTCCTATCACCAAAACAGGCAAGTGA
TTCTTCTTTTAAACAGAAACTTGATTATTAAGGCGATTGGCAatgaaaat
agcaaaaaataagACCAGTTCCCGGCGTAATTTTGAAGGGAATGAGTAGC
AAGAACAGCAAAACTGAATATGAAGAGATAAGTACTCTCaatatttaatt
tgattttatttcttcaaaatttccagTCAACAATACAAACTTTGGAAATA
ACAGACGATGCTGTGATCAAAAGacgaaagaagaaagattttgACTCTAA
TCGGAATGTAAGTTTGGAGTTTTTCGAACTTTCTTTTTAATATCAGTGTT
CACCATCATATTCAAAAAGACCTTTAAGCCTggaaattcaaaagaaaaat
acttttaaatcaatcaatatcATCATATAGTTCGGTGATTGTCCATTGGA
CGAAAACCCACAATCAACAAAAGATATGGATAGGAGGCTACAACAAAATG
AAAGCGAGGCAGCTAAAGAAGTAGATATATCTTATGATtcacaaaataag
atttttatgGATTATTTTGTTCTACGCTTTATAAAAGACCTTCCCAAAGt
gcatgaaaatttcatgtttcttgtATTTTCAGTCTCGAGCAGATTTGGAG
GATTTTTGGAACGAAATCACAACGacagaaagtgaagaaaatattaaaga
tGAAAAATCTTTTGCTATTGATGTTGATGTCAAAGAAAAACAACGCGAAA
TTGAAAGTGCTATTGAAGGTGTTATTGAAAGTGTTTTATCACCTAAACAG
GCAAGTGATTCTTCTTTTAAACAGAAACTTAATTATTAGACACAAAAAAT
AAGACTGCCCTGCAATAGAGTGATTCTAAAGGAAACTAGTAAAGTAAgca
tattcatctggtggctgtcggtaGAGCTGGGAGTGTCTTAGCGAGTACCT
cacgggatttttcatctcgtttcttagtgagttccactttgaagattttc
gaaaattagaagcctttcaagtgctttgacgcaagttcgattttttcact
actgcaggagcttcgaaatttaaaagtgacgtaaaaaaatcgaatgttta
gagcccgaaaacccgggctcaaaacattcgaaaaagtcgcaaagtggaat
agacgttaattgcgtaaaaaaaacgcgggtgacgtctagtataggctagg
aGTGTCTATCCCATTTTATATTTGCGCTGTACCTGGGATATAGAATGCTG
AATTGGAGTGTCACACCTCTCAGCTCCCTGGTCATCGATCCAACCCACAA
TCCTTAGATTGTAAAGCGAacgctctaccgactgagctacccggcaaTCG
ATGAGTagcaaaaacagaaaaactaAATATAAAAGGATTAGTATCTCAAT
AgttaatttgattttctttctttaaaatttccaGTCAACAATACAACCTT
TGGAACTAACAGATAATGCTGTCATCAAAAGacgaaagaagaaagatttt
gACTCTAATCGCAATGTAAGTTTTGAGTTTACTTTGCTTTTTAACTTCAA
TTccagaaattttttgaaggaattttgaAGTTGTTCAATTTTCAGCTAAC
GAATTTTCATTGTCATAAAGAACACCAACTCGaatctgaaaaattaaact
aattGTATTGTATATCATATAGTTCGGTGATTGTCCACTGGACGAAAtca
caaaatcaacaaaagacATCGACACAAGGCTAGTGCAGCATGAAAGCGAG
GCAGCTATAGAAGTAGATAATATTTACGATTATCAGTTCTGGACAAAGGA
AGTCTTTCTGTTGTTGCAACCATTTAACTCTAATTTCCATTTTAAATTGA
GTACGAAAGATCtttcaaaaatacatgaaaatttcatgtttcttgtATTT
TCAGTCTCGAGCAGATTTGGAGGATTTTTGGAACGAGATCACAACgacag
aaaatgaagaaaaaattaaagatgaaaaatcttttgatattGATGTTGAT
GTCAAAGAGAAACAACACGAAATTGAGAGTGCTATCGAAGATGCTACCTC
ACctatgtttaaagtttgttGTTTCTTGAGTTTTCTTCCTGGATGGGTAC
TAAAGTTGGGGAATATCgggtactcttgtctcccgaatagacgtcccccc
gctaatctacattacagtgtagatagaccttaaacttgttaaaattttcc
tttttgttagtattggttcttattttacgtgttcatttgtgaAAGTTTAT
TTTTAGTTGTTGATGCTTatttggaccccccccccccccccccctNAAAG
CTTGGCTAAGGACTTGcttaaatttgagcaaattAAACAATAGGAAGTAC
aaagcaaacaaaaaaataccTCATCGAggtttatgaaaaaaatgttttca
catTTCAGTCAACAATAAAACCTTTGGAACTAACAGACGATGCTGTCATC
AAAAGacgaaagaagaaagattttgACTCTAATCGCAATGTAAGTTTTGa
gttttctaaactttctttttAATATCAGTGTTCACCATCCTGTTCAAAAA
GACCTTTATACctggaaattcaaaaacaaatcttttaaatcaatcaatat
cATCATATAGTTCGGTGATTGTCCATTGGACGAAATCACACAATCAACAA
AAGATATGGAAATGAGGCTTCAACAAAATGAAAGCGAGGCAGCTAAAGAA
GTAGATATATCTTATGATtcacaaaataagatttttatgGATTATTTCGT
TCTACGTTTTATAAAAGACCTTCCCAAAGGGCCCGAAAACTTCACGTTTC
TTGTATTTTCAGTCTCGAGCAGATTTAGAGGATTTTTGGAACGAAATCAC
AACGACAAAAAGCGAAGAAaatattgaagatgaaaaatcttTTGCTATTG
ATGTTGATGTCAAAGAAAAACAACACCAAATTGAAAGTGCTATTGAAGGT
GTTTTATCAACAAAACAGGTAAGTAATTCTTCTTTTAAACAGAAACTTGA
TTATTAAGGCGTTTGACAatgaaaatggcaaaaagaCCATAAGACCAGTT
CCCGGCGTAATTTTGAAGGGAATGAGTAGCAAGAACAGTAAAACTGAATA
TAAAGGgataagtgcactttatagttaatttgattttctttcttaaaaat
ttccagTCAACAATACAACCTTTGGAAATAAAAGATGATGCTGTCATCAA
AAGacgaaagaagaaagattttaACTCCAATCGCAATGTAAGATTTGAGT
TTACTTtgctttttaatttcaattccagaaattttttgaaggaattttga
AGTTGTTCAATTTTCAGCTAAGGAATTTTCATTGTCATAAAGAACACACC
AACTCGaatctgaaaaattaaactaatgCGACTAAATGTTTGCGAAAAAT
TTACCCTAACAGAGACAAAATCGACAAAAaattgacccttagagagacag
tTTTTGAGTCTGCACATACCCGATACCTATTTTTATACACCCCTCCTCAC
CTGGTATTTCTTCCAAATTCTtcgttagtttttttttatattgatattAT
AAAATTGAACTAAAAGGCAAATAACTTGTAAACTAGCACTCTTTCTTCCC
ACAGGTTAACCTACTGGTATacgtaccttttttcctggtaATAAATAGCC
AATCAGAGTGGAGTACGGTAGTCCTCTTTGCTTTTCCTATTTCTTTTGGC
TGTCTCGCGAAATTATTTTCAGTCACAAAAATATTATGCTAAAATGATCT
CATCATTGTAcgatttttaccattttacgaGCTTTTGAATTATTTCTCTC
TTGTAACAGCTCTTTCCTCCATTACTGGACACTGAGAGAGAAGAGACTTT
TTACCGAGCAGACGTGGATGATGTCGAACAGCAGGTAAGCTTTCTCTTAA
TTATACCGAAAATGGGCAAAGGAAATTGAAAGTTATTccaaaatcgggaa
atcgggttTTCCATCTACTTTGACAGATTATGTATAAATTTTTTCGATTC
GAAGCCCTTTAATTTACTTCATATAATCCTATAAATTCAAGTAGGGTCGT
TTTCTTCAGGTGTTTAAAAAATCACTACCCCAAGATCTTGCAAACTTAAA
GTAATGTGTCTCTCATATTAGATAATACGGTAGATCAACTATAAAATgga
tttttcctcttttttttaagttaagtaacttccgccattatggaagcaag
cGTTGGAAACTTTAGAGGCGATtgcttacgcaaatcgaacgtttgcttcc
ataatggtggaattTACGTAACAGATGAAAACCTCTGTAACAGCGTCCCA
ACAATACCAAAAAAGACAATTTCTACCGGCAACCACATTTTGTTCTTTAG
GCACAAGTTAGTCTTCTTGATGTATCTGGGGAAAACTCGATCATTCGacg
gaaaaagaaaaaagatgccAACGAGTCTCAAAGAAATGTAAGTACATTAT
ATATAAtattatcggccaaaacttagttggccctaagtgactaaattttg
gtttggtgactaaaattagggccgactaaaaatttgggccgtctaaaatt
tgggccgtctaaaatttgggccaaattaaaagtttataactaagctttcc
ttattttccagAATTTTAAGCTTTCTGCTATTAtccatctgcttgtaaat
ttagaaattgcccaaatttttagtcggtcttaattattagtcggccctta
gtcactaaattttgacgaggtgacttaAATGACCACACTCCCGGGGGGac
actcgatttcgaaacaaCGGtctgtgccgcgcaaaatctgccaTTCAAAA
TCGCATATTTTGAGATGCtaaaaaaacctacccttaagcgcggcacatga
ccagatcatatgagtgccccccagACCACACTGTAACTGGGGAGACTGCC
GTTATTATCATTTCTCTAACAGCGATCTTTTTGTCCACTCATCttctaaa
attgaaactttgataCTTTAAGTCTCGAGCCGAAGTAGAGAATTTTTGGA
ACGAAATTGCAAATGATGGCAAGCCTACCGTTGACAATGACGCGCCCTCT
CAACCAAAAGTCATCATTGTGGATTCATTGGATGATAATTCTCTTGGTCT
ACCAAGTAGAAGACGACCGTCAGAGTTACGAAATGTGAGTTTTTTACACA
TTGATGTTTCATATTTTGGAAGACTGGAGTTATTTTTAATCCCTGTATTA
CAGTAATAAGGTAGTTACATGATGCTATACTAATACTATACAAATCTCTA
TatctcaaatgtctccttaagtAAATGGTACACGTTTAATGGCCCCCTTC
AGATAACAATGCTTTATAAGCTTTTCTCCATAACATTTATTTTCTATACC
TGGAATAAATTTATGTACCCCTtgcatgttcgagttatagagactccact
caTACTGTAGTTTATgtcgtcatttttggaatttccttTTCAGTCGCAAG
cagaaattgagaaattttggACGGAGGCGCGAATCAGAACAGCTGCAGAA
AAGTTAGAATCTGAAGAAACGATGACTGTTGTCAAGCGAAGAGCAAGTGA
AGGAGATGTGCTTCGTGATGATGTTCGAAATGTatgtaaaatcgaaaatt
gtCAGGGGGTTAAAAATATACTATCATAGAACATCCCTTGTTCGAAATTC
CGAGGGGGGTAGGAATTTACTACCATTGGCTCCTGGTTATTCGAAGTTCT
GAAGGGGGCTACGAATTTACAGCAatagactcccggttattcgaagttCA
GAGGGGCTAGAAATTCCGGACCGTAGGCTCCAGTTAATTCAAAGTTCTGA
GGGGGTTAACATATACTACCATTAGAACTTCGTTATTCGATGACTCGAAG
GAGATATGATTTTACTTCGAATCACAGAGGAAGGTTTACCTACAAATTAG
ACTGCTTTGAGAATGTTATCAGAATGTGTCCTATGCAATATTTGTTCTTC
ATGACGGAAGATTTTGTTTCCTTTCAACAAAGTCCCAACTCGAAAGTCGA
AATAACCAAGGGATtttttgtctgatttttaaGTAAAGCAGATCCAAAAA
GCCTTGTTGCTCACATATGTAAGGTTTGAATAACCGGTATCTTCTTGAAC
TGCCTTTTAATTATTTAGCATTTTCTGACTTGCAATGTGATGAAGTGGAA
GTTTCCATTCTCAACACATTTAAGGGAAAATCCTGAATAGAATCTCTAGA
TTACAGAAGTTGTGTTATAAATTACCTTCGTTTTCAGTCTCGAGCAGATT
TGGAGGATTTTTGGAACGAAATCACAACaacagaaaatgaagaaaatatt
gaaaatgaaaaatcttttgatattgatgttgatgttaaagaaaaacaaca
gaACGTTGACGTTGAACCACCGCAAGATAAAAGTTTATTGGATGTTCCAG
TTCGTAGAAGACGGTCGGACTTTAGAAACGTAAGACAGGAACATTGTTTT
GAGTCAGTCCTCATTTATCTGGTAATCATCCTTATAAATAATATGTCTAT
ATGTAAAGCCATGATCGTagaaatctcgaaaaatgaCTTTAGAGACTTTT
TCTTAAAGATGTTTTCTTCCTTTAACagaattttgaaatcttttgacttT
TAGATGGACTCTTAAGATGTTTGAAAACCGAGTCCTATTTATTGGCGTCT
TTTACCAAAACCCGGTTCTACTTGCTCATCTTAAAATAAAGGCCGGTTTc
tacttgcgcgcgctgcgatcgttctttttggcttcaatccatggcgttct
aaatccaAGGCCTAGCAAACGTGATCTGAGGTCAAAATTTAGATTTAGAA
CGCAATGCTTCAATCCtatttgcttggaaaaaatattacgtcataaaaaa
tctaacgtgcgctcgaaaaaaagattgaacacatttcaacttttttaaac
caTTACATCAGATCGCACCAATAGAGTTGCTTCATTTTCCTTTTGACCAA
TAGCTTGGAAGCTTTCCTCGAAAAactgcgatcgaagcgcgcgcaagtgg
agaccgactTTTTCAAATTGACGACAAAAAATAAACAGTGGAATCTTTAG
TAATGAAACCTAAGTAATTTATACAATTTATCCCCTCTGGTTCAGGATTT
TGAGTAAACATTTAGGATTAGCACCTTTAGCCTTAGTGCCTTACTAGatt
cataatttttgcatacaatccACTCACTCTAATTCAAACCTCTATTATGt
aaatttttctgtaattcgaacttaaaaaaattttccgccccttgaaaatc
gaattaaagtAAGTCAAATATAATCAATGTCTTTATTTAGTCTGACGCAG
ACATTGAGAGATTTTGGACTGAAGCACATATCAGAACTGCTGCAGAAAAA
TTGGCAACTGAAGAAACGGCTGTTATCAAAAGAAATAAGACGAAGGAAGA
TGCTGGCGAATCCAAGAATGATCGTGGTAAAATACGGAACGTAAGTGAAC
TAGATTTTCTGTATAAAGAATGACTGTTTTCGTAGAAAAGTGGGACATTG
GTATAACATGTTTTGATCGAGTGTTCGACCGTTGTTTGTTTATAATTGAT
ATTGAATTTTTGTAGAATTCTTGCAtcctttacatgttttttaaggGGGA
AAAAGCACAAATCTATGCAGATTTTCCTTTCGAGAAGGAcgttgaaaaat
ttattttttctcatcATCTAATTGAGTTGGGAATTAAAGAACTCTTTTTC
ATTGTTATTGTCGTTTTAAAACTTATAATCTCAATTCGCAACAGAGTGCT
CAACCATAAACATTTGATTACTGGGCGTGGCATAGATATATATCATGTAC
TCAAAACaagaatcctatgaaatagactCAAATATTTCAATAAGTAGACT
GAGCCATTCAAAAGTAGTTCaatatttcctttttctttttctcacaGTCG
CGGCTTTTGGATGAAGATTTTTGGAGTTCGTTTgactttgaaaatattga
agaagcggaaagaaaattcaaagatATTGAAAACGATAATAATAAGGTAA
CTTATTTATGTTAAGCTTCTTTTGTTCTACTCTGTCCCAAAGTGGGATCA
ATGGGTGGGTTGCCAATCTCTCCCTCTGGGACGTTGATAAATCAAACATT
CATCTTCTTGTTGCAGGTATCACCGAAACAGTCACAAAAGCAAAGTGTTG
GGAAACTGAAAGATGACATTCCCTTGGAAAGCGATGGCGACGGTGAATCA
TCTCTAGACGAATCACCCACAAACTCTTACATGCAACGTTGGGATGACGA
TGATAACAGTCAGGCAAGTGAAGAAAATGTTCACATTTATTTCAAAGAAG
ATATTCCGTCGTTTTGCaaaagattcccatttccgcactaagattccttt
gccacttttctagcggaaaacGACCATAACTTCATCAACAACTCAATCAg
gtttatattttcaaattttccaaaccAGGCTCAAAAGATGAGCCTTGAAA
CAAACTAACTGAAAATTGTATGGTATGCAGGGTTTCGATGGCCAGATTAC
GAGATGTTCAGAtattcgatggccaaaatattaagaacaagttaagaaca
ttttaaggcttaatgGACTCTAGAACGCtgaattttatagaaaaatggac
aaaaatactcaaaaaatggcaaaaataagaacatgttaagaaaattttta
ggcttgaaactcaaaaagttaagaacatcccttcaaggcttcaaaaaatt
tggatgtttttatgaaaaaaaacgcaaaaaaagtttcaaagtaTCATTGT
ACAGTTTGTGGTTTTTTTATGCTTTTTTCTCCTTACAGATCGATGATAAT
GATAATGTAAGCGAAATTTCGTCCATTTGCACAGATGCTACTGATAGTTT
AAAGAGAAGAAAGTCGTTTGAAAACAGAAATGTATGTGTtatgtttttta
atattttatttttgactattatagaaaacacccctgtctcacagcccggt
gtaatttttttcttcagtggggataaaatccctatcgaaatcccaatggg
gatagaaattttattgttccaagattTTCGAGtgggaatgaaatcaaagt
caatttcccagtggggctgaaattccagcgtattttcccaccggggacca
aatttttgccaaattttccagtggggatggggtcCCAGTGGCTCTGTGAC
ACATGGGTTAAATACTGACAAAATATGTTAAGCGGCTTAcactaaggtcc
cgaataaaaGGAGGGTCCGAAATTGTACCTCCAGAAATTCCCGGTAGGTA
GTTATAAGCTAAAaacaggctatttagagcaatttAGCtacagaaaatgt
tttcaaaagtaaataagAAGGAGGTTCCCTATAAGGATGGGAGGGGgtcc
gaaaattttttgaaaattaagaaaTGGAGGAGATgtttattcgggacctt
agagtggCTGAATAGAAAAATTTACGTCAAAACGGAACAATAAGGGCGTT
TTTTAAAACACACCCGGTGTCTGCTATCTATATTTAAATTAATGAATCCG
GGTTTTCAATTCagacaaaaaacaattttctaaGTATATGTCGATATCTG
ATTGTTTAACTGCGACATAGACAAAACTGGTTCAGCATTCGAAATATCTA
CATGGTTATTCTAAAGCAtaattaaaaatctaaaataatttcaaattaga
aattttcatttcaatgtttttaaactGATGATGGTGGTCGGATGACACCG
AAACGtcttaaataaattttgattttattaaaaataaaatgaagtcgctt
ctgtgtttgaaatttttattgaactcattcaggaggatcaaccaatttga
taaaataatttCACATAAATCACTTTATAATATTCAATCTTTCAGTCGCG
AGCTGATTTTGACGACTTTTGGAGTAACATTGGAACAACCTCTGATGAGG
CGGTATCTTCAACATATAATTCATCAAGTTTCGAAAGCTCTTCAACAGCT
ATTAAcgatgatgaagaagaagaaaatgatgaaaatgaaaaattcgtTGA
AAATGGACAAGAGCTTGTTGAGCAGAAGGATGCTGAACTTAGAGAGCATG
TTGACGATGGACAGATATATATCCCAGATACACCAGAACTTgttgaaaat
gaacaaaaagatGTTGAACTTAGAAAGTTTGTTGACGATGGACAGATATT
TGTTGCAGATACACCAGAACTTTTTAAGAATGAACACAAACTTGTTGAAA
ATCAATCGGAAAGTGTTGAAAAGTACAAAATAGTTTTGAGTTCAAATGAT
GAAAGTGACGACGAAGATGAAATAGTTGTTGATGATTTTAGCGTTGGAAG
TGTGGTCGAAAGTGGTGTTCAATTAGTTTTGACCGAACAAAGTTCTGTTG
AGAGTGAAGGGAAATATGCCGATGCTGACCATAGCGGTGTTGAAGACAAT
TTGCAGCAGGAATCTTCAAAGAAGTTTGTTGAAGATGAAatgattgaaat
tgaaaatgcaCAAACCAAAATTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014763XLOC_014763Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026272-exon-sc0000566-1491911889:113301..113385TCONS_00026272-exon-sc0000566-1491911889:113301..113385Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:113301..113385TCONS_00026272-exon-sc0000566-1510915933:113301..113385Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:113301..113385TCONS_00026272-exon-sc0000566-1575043694:113301..113385Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:118487..118642TCONS_00026272-exon-sc0000566-1491911889:118487..118642Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:118487..118642TCONS_00026272-exon-sc0000566-1510915933:118487..118642Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:118487..118642TCONS_00026272-exon-sc0000566-1575043694:118487..118642Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:120035..120115TCONS_00026272-exon-sc0000566-1491911889:120035..120115Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:120035..120115TCONS_00026272-exon-sc0000566-1510915933:120035..120115Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:120035..120115TCONS_00026272-exon-sc0000566-1575043694:120035..120115Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:120505..120663TCONS_00026272-exon-sc0000566-1491911889:120505..120663Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:120505..120663TCONS_00026272-exon-sc0000566-1510915933:120505..120663Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:120505..120663TCONS_00026272-exon-sc0000566-1575043694:120505..120663Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:122410..122484TCONS_00026272-exon-sc0000566-1491911889:122410..122484Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:122410..122484TCONS_00026272-exon-sc0000566-1510915933:122410..122484Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:122410..122484TCONS_00026272-exon-sc0000566-1575043694:122410..122484Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:122951..123037TCONS_00026272-exon-sc0000566-1491911889:122951..123037Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:122951..123037TCONS_00026272-exon-sc0000566-1510915933:122951..123037Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:122951..123037TCONS_00026272-exon-sc0000566-1575043694:122951..123037Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:123573..123734TCONS_00026272-exon-sc0000566-1491911889:123573..123734Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:123573..123734TCONS_00026272-exon-sc0000566-1510915933:123573..123734Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:123573..123734TCONS_00026272-exon-sc0000566-1575043694:123573..123734Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:124044..124181TCONS_00026272-exon-sc0000566-1491911889:124044..124181Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:124044..124181TCONS_00026272-exon-sc0000566-1510915933:124044..124181Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:124044..124181TCONS_00026272-exon-sc0000566-1575043694:124044..124181Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:124838..125029TCONS_00026272-exon-sc0000566-1491911889:124838..125029Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:124838..125029TCONS_00026272-exon-sc0000566-1510915933:124838..125029Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:124838..125029TCONS_00026272-exon-sc0000566-1575043694:124838..125029Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:125891..126040TCONS_00026272-exon-sc0000566-1491911889:125891..126040Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:125891..126040TCONS_00026272-exon-sc0000566-1510915933:125891..126040Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:125891..126040TCONS_00026272-exon-sc0000566-1575043694:125891..126040Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:126498..126596TCONS_00026272-exon-sc0000566-1491911889:126498..126596Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:126498..126596TCONS_00026272-exon-sc0000566-1510915933:126498..126596Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:126498..126596TCONS_00026272-exon-sc0000566-1575043694:126498..126596Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:126717..126863TCONS_00026272-exon-sc0000566-1491911889:126717..126863Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:126717..126863TCONS_00026272-exon-sc0000566-1510915933:126717..126863Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:126717..126863TCONS_00026272-exon-sc0000566-1575043694:126717..126863Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:127389..127481TCONS_00026272-exon-sc0000566-1491911889:127389..127481Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:127389..127481TCONS_00026272-exon-sc0000566-1510915933:127389..127481Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:127389..127481TCONS_00026272-exon-sc0000566-1575043694:127389..127481Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1491911889:128446..129073TCONS_00026272-exon-sc0000566-1491911889:128446..129073Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1510915933:128446..129073TCONS_00026272-exon-sc0000566-1510915933:128446..129073Clytia hemisphaericaexon
TCONS_00026272-exon-sc0000566-1575043694:128446..129073TCONS_00026272-exon-sc0000566-1575043694:128446..129073Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:113301..129073 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.323917	0.200565	0	0	0	0	0.15004	0.0785883	0	0	0.510214	0	0	0.155233	0	0.116956	0.532874	1.47729	0.0344337	0	1.6804	1.83347	0.663243	1.1184	0.772101	0.591161	0	0	0	0.115656
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026272 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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