TCONS_00025887 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025887
Unique NameTCONS_00025887
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length149

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025887 ID=TCONS_00025887|Name=TCONS_00025887|organism=Clytia hemisphaerica|type=transcript|length=149bp
GCGGTTCAAATTGTGAATCACATTCAAAAAATTGGTTGCATGACCACAAA
GGTTGGTTTGGTGAAATTGTTACGGGAGAGTGATCAAAGAAATAAAAGAA
GTAAAAGCCGGCGCAAGTGAATCCAACTTTTGAAccaacatttaaaaaa
Run BLAST on NCBI

transcript from alignment at sc0000550:150866..151238-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025887 ID=TCONS_00025887|Name=TCONS_00025887|organism=Clytia hemisphaerica|type=transcript|length=373bp|location=Sequence derived from alignment at sc0000550:150866..151238- (Clytia hemisphaerica)
GCGGTTCAAATTGTGAATCACATTCAAAAAATTGGTTGCATGACCACAAA
GGTTGGTTTGGTGAAATTGTTACGGGAGAGTGATCAAAGAAATAAAAGGT
AATAATTTTGAATTTGAGACATACAGTTAACTCTCTCTAATTCGAACCTC
TACTATTCGAATCTCTCTATAATTCGAACTAAAATATTGGTCCCTTCAGC
TAGAAATTAGTATAAAATACTTTCTATAATTCGGATCTTTTTCTAATTCG
AAGAACATTCTTGGTCTCTTGAGGATCGAGTTAGAGAGAGTCAACTGTAC
GTCGTTTATTTTATCCATTCAGAAGTAAAAGCCGGCGCAAGTGAATCCAA
CTTTTGAACCAACATTTAAAAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014555XLOC_014555Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025887-exon-sc0000550-1575043694:151141..151238TCONS_00025887-exon-sc0000550-1575043694:151141..151238Clytia hemisphaericaexon
TCONS_00025887-exon-sc0000550-1575043694:150866..150916TCONS_00025887-exon-sc0000550-1575043694:150866..150916Clytia hemisphaericaexon
TCONS_00025887-exon-sc0000550-1510915933:151141..151238TCONS_00025887-exon-sc0000550-1510915933:151141..151238Clytia hemisphaericaexon
TCONS_00025887-exon-sc0000550-1510915933:150866..150916TCONS_00025887-exon-sc0000550-1510915933:150866..150916Clytia hemisphaericaexon
TCONS_00025887-exon-sc0000550-1491911889:151141..151238TCONS_00025887-exon-sc0000550-1491911889:151141..151238Clytia hemisphaericaexon
TCONS_00025887-exon-sc0000550-1491911889:150866..150916TCONS_00025887-exon-sc0000550-1491911889:150866..150916Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000550supercontigsc0000550:150866..151238 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025887 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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