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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025797 ID=TCONS_00025797|Name=TCONS_00025797|organism=Clytia hemisphaerica|type=transcript|length=680bp
CGAAATCACTAAAATTGACTTTTACGAGAATCCAACGTTGAGAGAAAGAT
TTCTTGAAAAACAACGAGAATTTGAGGATAAATATCCAAACTCATCCGAG
GCTGAACCAATTTACGGATTCCATGGAACAAAAAAAAGCGACGTTGTTTG
CGAGATCATGAACAACAATTTCAAAGCAAGTACACGAGGTAAATTTGGTG
CTGGTGTGTATTTCTCGGAACAACCTGACTACACGTTTCGCTACGGTGGT
AAAAACAACCTTATATTAGCACGAATCCTACCTGGAAAGATTAAAGAATG
TGATCATATTAAATGGAACAGTGATTTGTGTACTGAAGGATATGATTCAC
ATGGTGCATTCAAAAACGATGATGATACTTTTCAAGAAGTTGTTATTTTT
GATACCGAACAAATTTTACCATGCTATGTCATCCATTTTAAACTAGTTTA
AATAACAAACGAACATAACGAATTCTTGGATACAATATTGAGATAACTAT
TTTAAAAACGCGTGACACCGGGGATTACGATGCAAAAATTAATACAATAC
ATATTTTTATGCATAAAGAGAGGTGGAAGATTCCACTCTAGCGTTTCGGG
CTTTAAGCTCAATTGGCACCACTATTCTTCTACAATCAGGcgctactttg
aaattttcagatttttgtaacccttagaaa Run BLAST on NCBI protein sequence of TCONS_00025797-protein >TCONS_00025797-protein ID=TCONS_00025797-protein|Name=TCONS_00025797-protein|organism=Clytia hemisphaerica|type=polypeptide|length=149bp
EITKIDFYENPTLRERFLEKQREFEDKYPNSSEAEPIYGFHGTKKSDVVC
EIMNNNFKASTRGKFGAGVYFSEQPDYTFRYGGKNNLILARILPGKIKEC
DHIKWNSDLCTEGYDSHGAFKNDDDTFQEVVIFDTEQILPCYVIHFKLV Run BLAST on NCBI transcript from alignment at sc0000547:190578..191838+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025797 ID=TCONS_00025797|Name=TCONS_00025797|organism=Clytia hemisphaerica|type=transcript|length=1261bp|location=Sequence derived from alignment at sc0000547:190578..191838+ (Clytia hemisphaerica)
CGAAATCACTAAAATTGACTTTTACGAGAATCCAACGTTGAGAGAAAGAT
TTCTTGAAAAACAACGAGAATTTGAGGTAAAATAGTTTTTGCTTTACAAT
GATCCTTTTTAATCTATACGTTGTGAAAATAGAGAGCTGTACTATCAAAT
ACAGTGGgcctttccagaaaaaaaaccgttttttgaggaggtcatttttt
aTGTTCCAAAAGTTTGAAGCGTTTCTGAATTTGATTTGAAGTATAAAAAT
CGTCAAATAAAGTCGGAACTCTATGGGTGTAATTTTCAAAACCTTGTAAC
AACTAAGAATTCTTGAGGAATTTAAATCTAACAGTGCTGGGggtctgatt
attttcaaccggaatttttgaaaactttgacctCTTCAACAGGGTGTGGA
AGTGATGGATTTGAaccttattttttttattttggcctCTAAAGGTTTAT
TCTTTCGTAAGTTTTACTGCAGTGTGTATAAGATATGACATATAAACTTT
ATAAACGGGACTGGAATAGTTTTGTGGAACGGAGCTTTTTGTATTTCGAG
TCCAGATCCCAAGTGTGAATTATAGGTTCCCGATGCAAAAAAGAAGTTGA
CTACATGGGCATATTGCTGCAAATGAAAATTCTTTCCACTTTCTTGTTCT
TATCTAGGATAAATATCCAAACTCATCCGAGGCTGAACCAATTTACGGAT
TCCATGGAACAAAAAAAAGCGACGTTGTTTGCGAGATCATGAACAACAAT
TTCAAAGCAAGTACACGAGGTAAATTTGGTGCTGGTGTGTATTTCTCGGA
ACAACCTGACTACACGTTTCGCTACGGTGGTAAAAACAACCTTATATTAG
CACGAATCCTACCTGGAAAGATTAAAGAATGTGATCATATTAAATGGAAC
AGTGATTTGTGTACTGAAGGATATGATTCACATGGTGCATTCAAAAACGA
TGATGATACTTTTCAAGAAGTTGTTATTTTTGATACCGAACAAATTTTAC
CATGCTATGTCATCCATTTTAAACTAGTTTAAATAACAAACGAACATAAC
GAATTCTTGGATACAATATTGAGATAACTATTTTAAAAACGCGTGACACC
GGGGATTACGATGCAAAAATTAATACAATACATATTTTTATGCATAAAGA
GAGGTGGAAGATTCCACTCTAGCGTTTCGGGCTTTAAGCTCAATTGGCAC
CACTATTCTTCTACAATCAGGcgctactttgaaattttcagatttttgta
acccttagaaa Coding sequence (CDS) from alignment at sc0000547:190578..191838+ >TCONS_00025797 ID=TCONS_00025797|Name=TCONS_00025797|organism=Clytia hemisphaerica|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000547:190578..191838+ (Clytia hemisphaerica)
GAAATCACTAAAATTGACTTTTACGAGAATCCAACGTTGAGAGAAAGATT
TCTTGAAAAACAACGAGAATTTGAGGATAAATATCCAAACTCATCCGAGG
CTGAACCAATTTACGGATTCCATGGAACAAAAAAAAGCGACGTTGTTTGC
GAGATCATGAACAACAATTTCAAAGCAAGTACACGAGGTAAATTTGGTGC
TGGTGTGTATTTCTCGGAACAACCTGACTACACGTTTCGCTACGGTGGTA
AAAACAACCTTATATTAGCACGAATCCTACCTGGAAAGATTAAAGAATGT
GATCATATTAAATGGAACAGTGATTTGTGTACTGAAGGATATGATTCACA
TGGTGCATTCAAAAACGATGATGATACTTTTCAAGAAGTTGTTATTTTTG
ATACCGAACAAATTTTACCATGCTATGTCATCCATTTTAAACTAGTTTAA
GAAATCACTAAAATTGACTTTTACGAGAATCCAACGTTGAGAGAAAGATT
TCTTGAAAAACAACGAGAATTTGAGGATAAATATCCAAACTCATCCGAGG
CTGAACCAATTTACGGATTCCATGGAACAAAAAAAAGCGACGTTGTTTGC
GAGATCATGAACAACAATTTCAAAGCAAGTACACGAGGTAAATTTGGTGC
TGGTGTGTATTTCTCGGAACAACCTGACTACACGTTTCGCTACGGTGGTA
AAAACAACCTTATATTAGCACGAATCCTACCTGGAAAGATTAAAGAATGT
GATCATATTAAATGGAACAGTGATTTGTGTACTGAAGGATATGATTCACA
TGGTGCATTCAAAAACGATGATGATACTTTTCAAGAAGTTGTTATTTTTG
ATACCGAACAAATTTTACCATGCTATGTCATCCATTTTAAACTAGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025797-exon-sc0000547-1491911889:190578..190653 | TCONS_00025797-exon-sc0000547-1491911889:190578..190653 | Clytia hemisphaerica | exon |
| TCONS_00025797-exon-sc0000547-1510915933:190578..190653 | TCONS_00025797-exon-sc0000547-1510915933:190578..190653 | Clytia hemisphaerica | exon |
| TCONS_00025797-exon-sc0000547-1575043694:190578..190653 | TCONS_00025797-exon-sc0000547-1575043694:190578..190653 | Clytia hemisphaerica | exon |
| TCONS_00025797-exon-sc0000547-1491911889:191235..191838 | TCONS_00025797-exon-sc0000547-1491911889:191235..191838 | Clytia hemisphaerica | exon |
| TCONS_00025797-exon-sc0000547-1510915933:191235..191838 | TCONS_00025797-exon-sc0000547-1510915933:191235..191838 | Clytia hemisphaerica | exon |
| TCONS_00025797-exon-sc0000547-1575043694:191235..191838 | TCONS_00025797-exon-sc0000547-1575043694:191235..191838 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000547 | supercontig | sc0000547:190578..191838 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR012317 | Poly(ADP-ribose)pol_cat_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003950 | NAD+ ADP-ribosyltransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0003950 |
NAD+ ADP-ribosyltransferase activity |
Blast
The following BLAST results are available for this feature:
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