TCONS_00025716 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025716
Unique NameTCONS_00025716
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3547

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025716 ID=TCONS_00025716|Name=TCONS_00025716|organism=Clytia hemisphaerica|type=transcript|length=3547bp
AATTTCACGATGAGCCCAGCTgcaaatttaatccctgcaaaaaattttcc
catttaAGTATCTCATATCAGTGCTCCAAGAAAGTGTATATGGTTTTTGT
GTGTGCcaccaaatgaaaattaaaaactatCTTATATCGAAACAAATTTt
attacttatttttatttcatcataGATTTACAACAATAAAAACTTTTAGT
GAAGaataagaaattgaaaaatatttaatgttTTTACTTGCAATTAATGG
ATAAAATAGACCCACAGAAACGTGAATTACTGGAAGCAAGGCTGTTCTCT
ACAAAAccATATCCAACTTGTGATATTGCATCTCAGAATGGTGGCAGTTC
TGGCTCTGACTCATCAGATATGCCGCCAGTCCATGTAAATTTGTACAATC
CTATTTCAACTGATCCACTTCTGAGTCCTGCACCACCACCAAAATCAAAG
ACTCCACCACCTACAAAAGGGCGAAAACGAAAATCCAATGCAACTTCATC
AGTTGAAAGGAACTCTGAAGgctTGATTAAAGCAACAAGAGTACTAAGCA
GTGAACCACCACCTCCCCCAACTATtgcagaatttttcaaaaagGATGCT
TCAAGTCCATCCAGGAATCATTTGTATTCCCAGATCAGGCAACAGTCACA
ACAGCCTGTTGCAAGATCTCCTTCAGTTGCAAATAACGATATAGCTGTTA
CAAGTAGGGGTGTTCAGacGGATCTCAACTTCACGGATATATCTCAATTG
GAAACAATAGCTGAGAATCACTTGCGAGGTGGCAGTCCTACCCACAATAA
CAATGTGGCCAATGAAGAGCTGCAGCGTGAATGTCAACAACTGCAACAGC
AGCTTCGAACATATGTAGTTAACGAAAAACAATTAAAAGAGAAATGTCAA
CGTAGTGTAGAATTAATTAAAGACTTTTTAATAAAACAGACATCTTCAGA
TCGGAAGAAAACGCGTGAAGACACAATGAGGAATAGATTACGACTAGGTC
AATTCAATACTGTACGtcAAGGTGCATCATTCGTAGAGCAATGGAGTGAT
GGCTATGCTTTTTCTGAAATAAACAAGAAACTAAGCAATGTACAACAACA
AAAAGAGGATCTAGATaaacagaaaaaacatttactaaAAAGGAGGCCAC
CTTCAGAGAGAGCTctcgaaaagaaagaaaagaagggCAAAGGTCTTGTG
GATGAAGATGGTTTCAGGAGGCCTGGTGTGCCAGTAAGtgCATTATCATT
CTCAGAATATCATGAACAGGAGGAGATCTTGAGGCTACgaacaaatcaaa
tcaaaaaggaaGAACAGGAACTGCAACAGGAATTAGAAAAATTGGAACGT
GGAAGAAATATTCATATCAGAGAACTTAAACGAGTTCATAACGAAGATCA
GTCAAgGTATAACACGAACCCCATCCTTAACAGTCAATATCTACTACTTC
AACTTATTGGGAAAGGTGGATTCAGCGAAGTTTTCAAGgcttttgatCTA
AAAGAGCTGAGATACGTTGCATGTAAAGTTCATCAACTCAACAAAGACTg
gaaagaagataaaaaagcAAATTACATAAAACATGCTGTTAGGGAATACA
ACATACATAGATCACTTAATCATCCGAGGATAGTCAAACTTCACGATGTA
TTTGAAATAGATTCAAATAGCTTTGTAACAGTTCTAGAATATTGCTGCGG
CAACGACTTAGACTTTTTATTGaagcaacaaaaaaatatacCAGAAAAAG
AGACTCGAGCAATTATGATGCAGGTTGTCAATGCTCTAAAGTATCTCAAT
GAACGAAAACCTCCTGTTATACACTACGATCTCAAACCAGGCAATATTCT
ACTCGAAAACGATGGCTTTATGAGCTGGGAAGTGAAACTAACAGATTTCG
GTTTAAGCAAGATTCTACCAGAAGATGGATGTGACGATAGTATAGATTTA
ACTTCTCAAGGAGCTGGTACATACTGGTATTTACCTCCTGAATGTTTCGT
TGTTGGAAAAGCTCCACCTAAAATCTCTTCGAAGGTCGACGTATGGTCAG
TAGGAATTATCTTTTTTCAAGCGCTTTACGGTCGAAAGcCGTTTGGACAT
AATCTTTCACAAGCAAGCATACTAGAACAAAACACAATATTAAAAGCAAC
CAATTTAGATTTTCCAGCCAAACCACCTGTCAGCCAAGAAGCGAAGAACT
TTATACGGAGATGCTTGACGTACAAAAAGGACGAGCGCGCGGATGTGTTC
GCGTTAGCAGAGGATGCATATTTGAAaccaaagaaaatacaaaatgaaaT
AAGAAAACAAGAACGTTTACATCATTTAGACTCGTCTTCATCAAAGTCGT
TCAATGAAGTTGCAACGTCTTTATCGAATTGACCGATCAGACTACTAGAA
AAGATGTGTTTCATATTGTATTTGTattgagaaaaagaagaagaagcagG
AAAGGAGAAGAGATGGTGAACCAGTAGATTCGTGGCATAACCCCAGACAT
CATTCAGAGTTTCATCTGCGGGACACACACTTTGAATTTAGATTCACCGA
GCCTTTGATCTTTGGACTTTTGACTTACTCTTCGATCATTTAACATCGAT
TTTGAGATCATACTATCAACTTTCGAGCGTGGAGTTACTTTCAGATGTAT
AGAATTACATTAGCAAAATTCGAGATGATGTTTTTTCAAACTCACATCCA
CCTACAAGTCTGCTATGAAGTTTTTGGCAACGATTTCTACCTTTTCATAC
TTTCGCGTGTGCTTTTCACTACAATATTTCGTTACTGTTATTCGTTACAA
ATTAACTCGACCCCTTATACAGACTTTATGTGGCTGAAATTTAAAAACTC
ATCcatgtaaaatttattttcaaatgaaaatatttggtttggaattgaat
atttttccccTTCCCCAACAAATAGATATTATATGATAGTTTCAGAAGTT
TTTTCGTCGCGAACCTGAGGCTTCTAATTCCGTGTTACATATTTTTTGCA
GTTTGTCTCACAAAGCAATAAGTAACAACATAATCGCTGATTCTATCAAT
TTTGCATCTGCTTTCATAGAAGTTCATCAATTTCTACAATCGAAATACTT
TCGGATTTTTTCTAGTTAAAAATTGTGAGGTAAActgctcaatttttttt
aacgaaTATACTTTTCAAATTCTTCACTTATATAACAGTTAGTAGACTTT
ATGTACCAATTTGAAATCCTTGAACCTCCCATTCATATATTTTCAGGTAC
TTCAAtactttttaggctttttagagttgCAAGCTTGGTCAGCTCCGTGA
AGTTTGATTCACTAACAGAAAACTGATTTTTCCACTCAAGTTACTAAGCT
TATCCAAAAAGATTGCACTTATAACAAGGAAGGTCCGCTAGAAATTTATa
atgtgtcaatatttttttcaagtagacgctatgaattttgaaactttaaa
atacaaaaatgttaCGACGAAATATTGGAGgcattttttctcaaacaatG
TAAATATAAAGTCTTaaggcaaaaaaagtgaaatgcaTTCAAAATAT
Run BLAST on NCBI

transcript from alignment at sc0000543:169846..180517-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025716 ID=TCONS_00025716|Name=TCONS_00025716|organism=Clytia hemisphaerica|type=transcript|length=10672bp|location=Sequence derived from alignment at sc0000543:169846..180517- (Clytia hemisphaerica)
AATTTCACGATGAGCCCAGCTGCAAATTTAATCCCTGCAAAAAATTTTCC
CATTTAAGTATCTCATATCAGTGCTCCAAGAAAGTGTATATGGTTTTTGT
GTGTGCCACCAAATGAAAATTAAAAACTATCTTATATCGAAACAAATTTT
ATTACTTATTTTTATTTCATCATAGATTTACAACAATAAAAACTTTTAGT
GAAGAATAAGAAATTGAAAAATATTTAATGTTTTTACTTGCAATTAATGG
ATAAAATAGACCCACAGAAACGTGAATTACTGGAAGCAAGGCTGTTCTCT
ACAAAAGTAAGTGATTTAAGCTTCAGTTTTCATTTCATTTCAAATGGCCC
TACTTAACAAGTGAAATGTAAATAGATGTAATTACTATTTTACTAAAACT
CCAAAACCCTTCTCAAGCTTAGCTGAGCTGTATATAATCTGAGAAGGGGT
TTCACAAATTTACCCTATGGTATTAAATATAAAGAACATGGAAGCAAAGC
ATTATCCATACCAATAAGATAAATTGTCTTGTAGTGTTCAAAAGCAAATA
TTTCTTTTTTATTTTCATAGCCATATCCAACTTGTGATATTGCATCTCAG
AATGGTGGCAGTTCTGGCTCTGACTCATCAGATATGCCGCCAGTCCATGT
AGGTGAAAGTTGAACTTTAAAGATTAAACAATTTTTGCCTTTTCTAGAGG
TATCTTAGGGGAAGAATTCCGCAAAACACAAATATTCTCAAGATTTTGAA
AATCACCCCTAAAATTGTTTTTAGTAGGGCAAGAAAGGCCATGTTTTAAA
CAAAAAATTCTCCAAACCGCGAAATTAAATTTGGCGAAAATTTCTGCCCT
TAAGATAAGTTCTCTTTCAAGGTTGTTGGAGCTCAAAACTGTTAAAATTA
AAATTTTATTTTCCATTTAGTTAATCTTTTTAAAATAATTGGCTTATAAA
AAATTGAAATCAGAAAAAGCTCAACCAGAAAGTCAATTATTTTAGGTAAA
TTTGTACAATCCTATTTCAACTGATCCACTTCTGAGTCCTGCACCACCAC
CAAAATCAAAGACTCCACCACCTACAAAAGGGCGAAAACGAAAATCCAAT
GCAACTTCATCAGTTGAAAGGAACTCTGAAGGTAGGGAGCTAAAATGATA
TTTTGTTGTTAAGAAATAATGTGTTTTATTCCCCATCAACCTGCCTTAAC
TTCCCTTTAAACAAGGATAGGCATTCAAGAATATAACAACAAGATGGGTA
AAGGGTAAAAGTAATTACTGAGACAGGGTTAGAGTAGACGAGGGGTTTGT
TGTCCACTTTGGATTACAAATTTTGGAAAATTGTTTGCTTTTTTATATTC
TTTTCAAATTTGGACTTCTTTTATTCATTTCAGTGTATGAATATAACTTT
CAATTTTCATTTTCAGGCTTGATTAAAGCAACAAGAGTACTAAGCAGTGA
ACCACCACCTCCCCCAACTATTGCAGAATTTTTCAAAAAGGTATTACTTA
GGCGCTTTTTCTCCTTTACCTTAAAACCATGGCTTCTTTACAAATAAAAC
ATTTCAGTTTTTTCATTGTCCAAATAAAAGTTCTCTACTAGTAGATTCTA
TTTTTTGTGAAATAATAGCTTATTCAGCCAATATTGAATTGTCTACGTTA
TCTCCTAGGCTTGTTAGTGTTAAATCTTATTACATTTTCTCTAGGATGCT
TCAAGTCCATCCAGGAATCATTTGTATTCCCAGATCAGGCAACAGTCACA
ACAGCCTGTTGCAAGATCTCCTTCAGTTGCAAATAACGATATAGCTGTTA
CAAGTAGGGGTGTTCAGGTAAATATCTTCAGGTATATCTATGGTGAGCTA
CCTAAATTTTGTTTTATGTCCATTTCTAATCTCACTACTCTCAAAAATTA
ATAATATTCAATTCTAGCTCTACCAAGTTAAAATTGTTGCCTTTCCCTTT
TGAAAGAGGTTTACTGATAGTGATAAATTTAGTGCATACTCAGGCAATTC
GTTTTATTAACATTTGCAGCATTTAGAGCATCCTTTTTAACTTAGTTTTA
TTTTATTGTTTTTAGACGGATCTCAACTTCACGGATATATCTGTAAGTCA
CCCATTATACATCTCTTGTGTTGCACTACCTGTCCATCTATCTTTAATCA
TTAAGGGCTAAATAAACTTTTAATCATTATTTAAATGAAATTTCTTCTTC
AGTTACTTGAACCTCTTATTTAGGCTGGACTTAAAAAATTGTTGGTTTTC
CGTCACCCGACCGACCCTACCTCGAAACCTGCCAACCCAAAAAATGTTAT
TGCCATTTTAAAGAAGATTTTTTTTCCTTCAAAAACTTCAAATAATAAAA
AATCAAAACTCGTATCTTGTTTGTCTCAAGCATAAGAATCGAAAATTCCC
TGCTAGCACTTCTGTTTTTTATTCAAAATTACCTAAATGTAAACAAACCG
TTAACCCTTCCATGGACAAAAATTTCATAAATCGCCAAAATAAAAAAAGA
AATTCCGACCAACCGACCCACCTCCAAAATCTAGGGTCGGTGACGGCAAA
GCAACAATTTTTTAAGCCCAGCCTAAATAATAGGTTCAAGTAACCGAAGA
AGAAATTTCATTTAAATAATGAAACCTCAATGTCCAACCCTTTCTAAAAA
GTTGATTTCCTTGTTTTGTATTTTAGCAATTGGAAACAATAGCTGAGAAT
CACTTGCGAGGTGGCAGTCCTACCCACAATAACAATGTGGCCAATGAAGA
GCTGCAGCGTGAATGTCAACAACTGCAACAGCAGCTTCGAACATATGTAG
TTAACGAAAAACAATTAAAAGAGAAATGTCAACGTAGTGTAGAATTAATT
AAAGACTTTTTAATAAAACAGGTAAAATAATTAGCTCTATTATAATTTCA
GCATTATTATATTTATCACTTCTTTGATAATCTCAATTTAAAGGCATCTT
TTCTTGATCTTGCTTTATTTTATTATAAATTCTTTGTGCTTGCCAATGCT
CTCTCCTTACTCAGATTAATCATGAATATTATAAATTTTCAGACATCTTC
AGATCGGAAGAAAACGCGTGAAGACACAATGAGGAATAGATTACGACTAG
GTCAATTCAATACTGTACGGTAAGTAGGGATTTGTCAACTTATGACTTTA
CTAATTTGGCTTTAATATTTAGAAATTTTAAGCATGATGTTATTTTCAAT
AATATATCATTTTTTCAAACAAACCTTTGTGTGTACTATATCAAATAATG
TTATTTTTCTTTTGATTTTTTATTTAGTCAAGGTGCATCATTCGTAGAGC
AATGGAGTGATGGCTATGCTTTTTCTGAAATAAACAAGTAATTTTCCATT
ATTGATAACATTGTTTAGGGTTGAGGTTGATTTATTCAATTTCTTATTTC
TTATTTTCTTCTGTATTTGTGAAAAACCCATTTCAAAACTCATTTTTTAT
TTTATTATATTAGAATTATTTGGTTTCTCTTTTAGGAAACTAAGCAATGT
ACAACAACAAAAAGAGGATCTAGATAAACAGAAAAAACATTTACTAAAAA
GGAGGCCACCTTCAGAGAGAGGTTAGTTTCACATTATATATTTCACATAC
TTTTCACATACTTTTCACATACTGTTAGAGAAGGCAAAAAGCTGTCAACA
AACGAACTATCCAAATGGGTGCCTCAAAGTTTGTCAAACATCCAGGGGTT
ATGAAGTTTAGGTAAAACATCAGAGGGTTTTATCCTCCAAAAATGACCCC
TACGGTTTTTTTTTAATCCATCTTTTGATGTTGCATTTTTTCTATTTCTA
GAAAGCAATTACCTTTTAACCCTACCTAGCCCGGGCCTTTTTGAGGAATT
ATAGTCCGAGGGAGCAAAACATCCCAACTTTCATAAAATCTTCAAACCGC
TATAGCTCTTGATGTAGAAATGATGTTTTAATTCTATTTCGATATTCTGA
AAGCTAATTAAATTCCTCATTAACAATTTCAAACAGATTGCCAAAATTTT
CAGGTCTCAAGACTGTACAATGCACCAAAAGTGTAGAAAATAAATCAGTT
TTTCCTTTAAATTTGCCTTCCTTATTATGCTTATTTTCAGCTCTCGAAAA
GAAAGAAAAGAAGGGCAAAGGTCTTGTGGATGAAGATGGTTTCAGGAGGC
CTGGTGTGCCAGTAAGGTAAAATGCAGTTTTAAAGCTTTCGTCAATGACC
TAAATTGTTCCCTTAAATAAACCTTAGTTCAAATGTTATCATTCATAATT
CTTTTTTGAATTTGTGTCTGTTTTGTGGAGAAGATAAACCATTTTTTGAA
TTTTTTTTCTCATGTTAACTATTTTTTTGCAAAAAAAGATTTATTTTTAT
GTGAAATTTTCATTGGCAGAACCAGTTTTTGCAGTGGAATACTCACTTCT
TGTTGTGATTTTTAATTTTTTCTAGGGTTTTCTTCTATTGATTTTTAGTG
GTTGTTTTTCACGGAGCTAATTTTCGTAGTAGACAGCCAAAACCGTAAAA
ATTAGATACCTCAGAATTTAGTTCTTGCGAGGGAAATCGTTTTCATTCGT
TGTATTTTTTTTTTCGATTTTAGTGCATTATCATTCTCAGAATATCATGA
ACAGGAGGAGATCTTGAGGCTACGAACAAATCAAATCAAAAAGGAAGAAC
AGGAACTGCAACAGGAATTAGAAAAATTGGAACGTGGAAGAAATATTCAT
ATCAGAGAACTTAAACGAGTTCATAACGAAGATCAGTCAAGGTTAATTTT
CATTTAATTCATTTTTTTAAATAATCATTATCGACTATTTGAAGTACAAA
AACCGTCTTCTTGTCACTATCAAAAACAATTCAACATTTCAAAAAAAGTG
CCTGTAAAAAACATCCAGATCAAACTGGACTAAAAGTTATAATAGAGAAA
GTACAAAAAAAAGATTTTTTAAGAAGAGATGCTGATCAATAGCTTCCTTC
AATTCCTTTCAATTAGTTCAATACTTATACAATACAGTACTTTCAATTAT
TAATTCAACTTCCTTCATTAACTTTCTTCTATTAATTCTCTTGAAATAAG
ATAATTTTATTTGAAGACAACTTGCTATTATAAAATAAATATTTGCTATT
TTTTACCTCTCCGAGGCAGAACCATAATCGTTTTTATCTTATTCAGGTAT
AACACGAACCCCATCCTTAACAGTCAATATCTACTACTTCAACTTATTGG
GAAAGGTGGATTCAGCGAAGTTTTCAAGGTAAAGTCATTTTGAATTTGAA
TTTGAACTTTTTAGAAAATTTGCTATTAGTTCTCTCTCAGGCCAAGCAAC
ATATTTATATAAGACCTATAGATTTTTAGCTGATGATTGTCGTCAATACG
GGCGGCATGAAATTGAGAGTTCTAAATAATAAATCAAATTCTCATTCTTT
TAATTTGAACAAGCTCTGATATCATCGAGTACTCTCGGCAGATGAAGAAA
ATAGACTTGTATAAAACCTTTAAAAGCTTAGTTTGTGTCGTTAAGGTAAG
ACATCACAATTTCCAAGTCCAAACAGGTCCAAAACTACTTTCCAATCATG
AATTCTGTTTGTCTTTTTAGGCTTTTGATCTAAAAGAGCTGAGATACGTT
GCATGTAAAGTTCATCAACTCAACAAAGACTGGAAAGAAGATAAAAAAGC
AAATTACATAAAGTAAGAAATCAGACTTCAGTCTTGAAGTTCTTCAAACT
GCTTCAATTTTCTACAAAGGCCGTATATCAAACCCTTCGGGCTTTACGAT
AGTATAAGTTATGTGAATAAATTCATTTTAAGGCCGTTCTCAGCGTGCGC
TGCGATCGCACTTTTTTCGAGCAAAGCTTTCATGCTATTGGTCGAAGAAA
AATGAAACAATTCCATTAACGCGATCCGACGTAACGATTGAAAAAAGTTG
TATTCAACTGTTTTCTCGAGCGCCCGCTACATTTTTATGACGTCATCTCT
TTTCCAAGCAAAAATGATTGAAACCAAAAGGTGTGATCGCAGCGCGCGCA
AGTAGAGACCAGTTTTACAATGCTCTTAACCCACCGCGTAAGTAAGTGTT
CACTAAGTTTGACTATTATCTTTCTTTTCAGACATGCTGTTAGGGAATAC
AACATACATAGATCACTTAATCATCCGGTAAGTTTGTTGTTATTGATTCA
ATGAAATCTACCAAATTAATTAGCAATAGACCTTTTCATAAATTACGTCA
CGAACATCACTTGCCTCGTTTTGAAACTATTACCAAGGTGATTAACTCCC
AGCGGATTTCATTAAAACTTTTTTCTATTCATAAATTTTTTTTTTGATGT
CTCAAGGGATATAATCACCATGGTAATTGTTTGAATACGAGGCAAGTGAT
ATTCGTGACGTAATTTATGAAAAGGTCTATTAAAGATTAGTCTTGCCAAC
AAGTCTCATTCTGGTAGTAATTTTTGATAAAAATCGTTGAAATTATTATG
AACGTTGATTCGTGTTGCTGATTACATGATTATGGCAAAAAAGGTCTGAA
ATTTGAAAGAAAATGAAAATCTCTTCTTTTTTTAGAGGATAGTCAAACTT
CACGATGTATTTGAAATAGATTCAAATAGGTGAGATTATTTTCCTTTTGT
CAATTTATTAATTTAAAGCTGGAACGTTGGTTTCCTGCGAATTTGTGTAC
GTATTGTGTAACGGAAATAAAAAATCACTTGATCCCTTATTGAAGCTTGA
ATTAATTCCATAGGTATTTGACTTTTTGTGCTATCCATGATATGTACCAT
TGCAATGGCTTCCATGGACCCAACAGCTGATTGGTTGAAAGTGACGTATT
GTTTGATTTTACGTCACTTACCAAGCAGCTGTTGGGTCAGTGATGTAATG
TCAGAAGACATTGCGATGGTGCATATCATGGATTGATTATTCCATTATCC
AGTCCTATCACTATTAGGTTATGAAAATTTCTAACGAACCGTATTTTTCG
TTCTTTTTCAGCTTTGTAACAGTTCTAGAATATTGCTGCGGCAACGACTT
AGACTTTTTATTGAAGCAACAAAAAAATATACCAGAAAAAGAGACTCGAG
CAATTATGATGCAGGTAACGGTTTTTTAGTTCGATTCTTCATATTTGCAA
CATGATGAGACGGACCCGTAGAGGCATAAAGGCTCCAGATTTAGATTTAT
GATTTATGATAAATGCTCTCTAGGTAGTAAAGTGATGATACTTCACGCAA
TTTTTCTGGACCACAGTAAAACCGTAGTTTTTCTAACATCTGCCTTAATC
TTTCTTCGTAGGTTGTCAATGCTCTAAAGTATCTCAATGAACGAAAACCT
CCTGTTATACACTACGATCTCAAACCAGGTATGATTTCACTTGCCCTTTC
ACTTTAGTCATGATCATTGTTGTTGAATCCACTTACTAATATCAGAATAC
TGATAATAAAACAAACCTTTATCTCGTAGAACGCTAAATAAGCTTTTCGA
TATATTTTTCGATATGTGGTCTATTATAATCATTATCAATGTAATTTATC
AAGGAGCGATTGCCAAGTGCTTAAAGGCGTCAGAGTCTCAAACCAGGGAT
TCGCGGTNTAGGTAGTAAAGTGATGATACTTCACGCAATTTTTCTGGACC
ACAGTAAAACCGTAGTTTTTCTAACATCTGCCTTAATCTTTCTTCGTAGG
TTGTCAATGCTCTAAAGTATCTCAATGAACGAAAACCTCCTGTTATACAC
TACGATCTCAAACCAGGTATGATTTCACTTGCCCTTTCACTTTAGTCATG
ATCATTGTTGTTGAATCCACTTACTAATATCAGAATACTGATAATAAAAC
AAACCTTTTTCTCGTAGAACGCTAAATAACCTCGAATCCCTGCTCCTTCC
AATGTTCCGTTCATTTCATAGATAGCCGAGTTGGCTGGCCGTGGACCCCG
TGAAAACAATCGAAAGACTGTCTAAAAGTCCTAGATTACTGGGCTATCCA
CGTAAAATATCGACTATATCTATCTAATTTATTCTTCTTTCTCTCTCTAA
TCAGGCAATATTCTACTCGAAAACGATGGCTTTATGAGCTGGGAAGTGAA
ACTAACAGATTTCGGTTTAAGCAAGATTCTACCAGAAGATGGATGTGACG
ATAGTATAGATTTAACTTCTCAAGGAGCTGGTACATACTGGTATTTACCT
CCTGAATGTTTCGTTGTTGGAAAAGCTCCACCTAAAATCTCTTCGAAGGT
AATTTTTGTGTTCATTTACCTTTTTTACAAGTCATAAGTATTTTAAACGA
ATTACAGCAGATTACAGTCCGAATTCTGATTAAAATAGATTTTGTAAAAA
TCCATAACCACTAATGATATAGACTGGCTTCTTTTCTACAGAGAATGCCC
TGCTCTGTGTTGGGCCTTCTAGGATTCATCTCAACCCTTTACGTGTTGGC
TTATACTATCTACAAGCGCACTCACTCTAACCTAAATCACGATGTATTGT
GGAACCTAGTGCACATTCAACGAATTACTCACATAAGTTTCTGTGTACCC
AATTTCCCTCGTATCATTAGTCGGGTCAGGTAAAATTACATTTAGTTACC
ACAAGAAATTTAGAAAACCACAAGAAATAGTCACCGCGCTTTTTTTTAAT
CGTCTTTCTTGTTTTCTCGATTCTTTGTTCGTGAAATATGGTAAGGGAAC
CTTTGATCAGATCAAAGGTGGGTTTAGAGACTTCGATAGCCTTTACCTCT
ATCTATATCTATTTTCTTCTTCTTTCCAGGTCGACGTATGGTCAGTAGGA
ATTATCTTTTTTCAAGCGCTTTACGGTCGAAAGGTGGGTAATAATTCATT
GCATTGTTTTTGAATTCTTTCTATTTATAATGATTTTTAGATTACAAAAT
TATAAACATACATCGCTACAAAACTTTAAAGTGAGAAGCACAAGATTAAA
CATATTGTTCAGGTCGTAATTGATTTATGTTTTTTTTCTTCCTTTTAGCC
GTTTGGACATAATCTTTCACAAGCAAGCATACTAGAACAAAACACAATAT
TAAAAGCAACCAATTTAGATTTTCCAGCCAAACCACCTGTCAGCCAAGAA
GCGAAGGTTTGGGTCTTGATTTTTTGTTTGACTTGCCCCGTCAGGCTTTT
CGGCAAACCGATATTTTTTAAAGTGAAATCTTATGAAGAATACTTTTCAT
AAAAACTACGGCAGCACATGCGCAATATATTATTAGCCGATAGTATTAAT
GTAACGTTTTTTCTCGAGAACCAGAAATAGCCAAATGTATTTGTTTGTTT
CTTTGTCAGTGACTTTTATTTTAAAATCTGTATATATCAGTCATTCTCAT
CTGTGTCTATTCATTCTTCAGAACTTTATACGGAGATGCTTGACGTACAA
AAAGGACGAGCGCGCGGATGTGTTCGCGTTAGCAGAGGATGCATATTTGA
AACCAAAGAAAATACAAAATGAAATAAGAAAACAAGAACGTTTACATCAT
TTAGACTCGTCTTCATCAAAGTCGTTCAATGAAGTTGCAACGTCTTTATC
GAATTGACCGATCAGACTACTAGAAAAGATGTGTTTCATATTGTATTTGT
ATTGAGAAAAAGAAGAAGAAGCAGGAAAGGAGAAGAGATGGTGAACCAGT
AGATTCGTGGCATAACCCCAGACATCATTCAGAGTTTCATCTGCGGGACA
CACACTTTGAATTTAGATTCACCGAGCCTTTGATCTTTGGACTTTTGACT
TACTCTTCGATCATTTAACATCGATTTTGAGATCATACTATCAACTTTCG
AGCGTGGAGTTACTTTCAGATGTATAGAATTACATTAGCAAAATTCGAGA
TGATGTTTTTTCAAACTCACATCCACCTACAAGTCTGCTATGAAGTTTTT
GGCAACGATTTCTACCTTTTCATACTTTCGCGTGTGCTTTTCACTACAAT
ATTTCGTTACTGTTATTCGTTACAAATTAACTCGACCCCTTATACAGACT
TTATGTGGCTGAAATTTAAAAACTCATCCATGTAAAATTTATTTTCAAAT
GAAAATATTTGGTTTGGAATTGAATATTTTTCCCCTTCCCCAACAAATAG
ATATTATATGATAGTTTCAGAAGTTTTTTCGTCGCGAACCTGAGGCTTCT
AATTCCGTGTTACATATTTTTTGCAGTTTGTCTCACAAAGCAATAAGTAA
CAACATAATCGCTGATTCTATCAATTTTGCATCTGCTTTCATAGAAGTTC
ATCAATTTCTACAATCGAAATACTTTCGGATTTTTTCTAGTTAAAAATTG
TGAGGTAAACTGCTCAATTTTTTTTAACGAATATACTTTTCAAATTCTTC
ACTTATATAACAGTTAGTAGACTTTATGTACCAATTTGAAATCCTTGAAC
CTCCCATTCATATATTTTCAGGTACTTCAATACTTTTTAGGCTTTTTAGA
GTTGCAAGCTTGGTCAGCTCCGTGAAGTTTGATTCACTAACAGAAAACTG
ATTTTTCCACTCAAGTTACTAAGCTTATCCAAAAAGATTGCACTTATAAC
AAGGAAGGTCCGCTAGAAATTTATAATGTGTCAATATTTTTTTCAAGTAG
ACGCTATGAATTTTGAAACTTTAAAATACAAAAATGTTACGACGAAATAT
TGGAGGCATTTTTTCTCAAACAATGTAAATATAAAGTCTTAAGGCAAAAA
AAGTGAAATGCATTCAAAATAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014440XLOC_014440Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025716-exon-sc0000543-1575043694:180212..180517TCONS_00025716-exon-sc0000543-1575043694:180212..180517Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:179870..179947TCONS_00025716-exon-sc0000543-1575043694:179870..179947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:179387..179522TCONS_00025716-exon-sc0000543-1575043694:179387..179522Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:179028..179101TCONS_00025716-exon-sc0000543-1575043694:179028..179101Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:178701..178823TCONS_00025716-exon-sc0000543-1575043694:178701..178823Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:178426..178452TCONS_00025716-exon-sc0000543-1575043694:178426..178452Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:177647..177841TCONS_00025716-exon-sc0000543-1575043694:177647..177841Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:177399..177475TCONS_00025716-exon-sc0000543-1575043694:177399..177475Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:177181..177240TCONS_00025716-exon-sc0000543-1575043694:177181..177240Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:176947..177032TCONS_00025716-exon-sc0000543-1575043694:176947..177032Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:176352..176427TCONS_00025716-exon-sc0000543-1575043694:176352..176427Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:175777..175944TCONS_00025716-exon-sc0000543-1575043694:175777..175944Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:175290..175371TCONS_00025716-exon-sc0000543-1575043694:175290..175371Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:174856..174947TCONS_00025716-exon-sc0000543-1575043694:174856..174947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:174391..174436TCONS_00025716-exon-sc0000543-1575043694:174391..174436Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:173939..173982TCONS_00025716-exon-sc0000543-1575043694:173939..173982Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:173454..173556TCONS_00025716-exon-sc0000543-1575043694:173454..173556Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:173190..173256TCONS_00025716-exon-sc0000543-1575043694:173190..173256Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:172320..172513TCONS_00025716-exon-sc0000543-1575043694:172320..172513Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:171735..171788TCONS_00025716-exon-sc0000543-1575043694:171735..171788Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:171462..171569TCONS_00025716-exon-sc0000543-1575043694:171462..171569Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1575043694:169846..171196TCONS_00025716-exon-sc0000543-1575043694:169846..171196Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:180212..180517TCONS_00025716-exon-sc0000543-1510915933:180212..180517Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:179870..179947TCONS_00025716-exon-sc0000543-1510915933:179870..179947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:179387..179522TCONS_00025716-exon-sc0000543-1510915933:179387..179522Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:179028..179101TCONS_00025716-exon-sc0000543-1510915933:179028..179101Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:178701..178823TCONS_00025716-exon-sc0000543-1510915933:178701..178823Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:178426..178452TCONS_00025716-exon-sc0000543-1510915933:178426..178452Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:177647..177841TCONS_00025716-exon-sc0000543-1510915933:177647..177841Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:177399..177475TCONS_00025716-exon-sc0000543-1510915933:177399..177475Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:177181..177240TCONS_00025716-exon-sc0000543-1510915933:177181..177240Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:176947..177032TCONS_00025716-exon-sc0000543-1510915933:176947..177032Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:176352..176427TCONS_00025716-exon-sc0000543-1510915933:176352..176427Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:175777..175944TCONS_00025716-exon-sc0000543-1510915933:175777..175944Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:175290..175371TCONS_00025716-exon-sc0000543-1510915933:175290..175371Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:174856..174947TCONS_00025716-exon-sc0000543-1510915933:174856..174947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:174391..174436TCONS_00025716-exon-sc0000543-1510915933:174391..174436Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:173939..173982TCONS_00025716-exon-sc0000543-1510915933:173939..173982Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:173454..173556TCONS_00025716-exon-sc0000543-1510915933:173454..173556Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:173190..173256TCONS_00025716-exon-sc0000543-1510915933:173190..173256Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:172320..172513TCONS_00025716-exon-sc0000543-1510915933:172320..172513Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:171735..171788TCONS_00025716-exon-sc0000543-1510915933:171735..171788Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:171462..171569TCONS_00025716-exon-sc0000543-1510915933:171462..171569Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1510915933:169846..171196TCONS_00025716-exon-sc0000543-1510915933:169846..171196Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:180212..180517TCONS_00025716-exon-sc0000543-1491911889:180212..180517Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:179870..179947TCONS_00025716-exon-sc0000543-1491911889:179870..179947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:179387..179522TCONS_00025716-exon-sc0000543-1491911889:179387..179522Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:179028..179101TCONS_00025716-exon-sc0000543-1491911889:179028..179101Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:178701..178823TCONS_00025716-exon-sc0000543-1491911889:178701..178823Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:178426..178452TCONS_00025716-exon-sc0000543-1491911889:178426..178452Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:177647..177841TCONS_00025716-exon-sc0000543-1491911889:177647..177841Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:177399..177475TCONS_00025716-exon-sc0000543-1491911889:177399..177475Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:177181..177240TCONS_00025716-exon-sc0000543-1491911889:177181..177240Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:176947..177032TCONS_00025716-exon-sc0000543-1491911889:176947..177032Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:176352..176427TCONS_00025716-exon-sc0000543-1491911889:176352..176427Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:175777..175944TCONS_00025716-exon-sc0000543-1491911889:175777..175944Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:175290..175371TCONS_00025716-exon-sc0000543-1491911889:175290..175371Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:174856..174947TCONS_00025716-exon-sc0000543-1491911889:174856..174947Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:174391..174436TCONS_00025716-exon-sc0000543-1491911889:174391..174436Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:173939..173982TCONS_00025716-exon-sc0000543-1491911889:173939..173982Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:173454..173556TCONS_00025716-exon-sc0000543-1491911889:173454..173556Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:173190..173256TCONS_00025716-exon-sc0000543-1491911889:173190..173256Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:172320..172513TCONS_00025716-exon-sc0000543-1491911889:172320..172513Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:171735..171788TCONS_00025716-exon-sc0000543-1491911889:171735..171788Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:171462..171569TCONS_00025716-exon-sc0000543-1491911889:171462..171569Clytia hemisphaericaexon
TCONS_00025716-exon-sc0000543-1491911889:169846..171196TCONS_00025716-exon-sc0000543-1491911889:169846..171196Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000543supercontigsc0000543:169846..180517 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
15.4378	14.277	21.8117	23.2114	17.1352	13.0251	14.9832	16.6431	9.92815	11.4656	8.82441	6.42726	7.33372	6.61778	7.90005	9.8575	12.1556	9.67451	4.66619	5.80501	7.04946	7.27043	16.0129	15.8875	10.3557	12.3637	9.7571	7.59008	17.182	17.8422
Blast
[Close]
BLAST of TCONS_00025716 vs. Swiss-Prot (Human)
Match: TLK1 (Serine/threonine-protein kinase tousled-like 1 OS=Homo sapiens GN=TLK1 PE=1 SV=2)

HSP 1 Score: 524.628 bits (1350), Expect = 1.281e-169
Identity = 284/478 (59.41%), Postives = 360/478 (75.31%), Query Frame = 1 
Query:  877 KQLKEKCQRSVELIKDFLIKQTSSDRKKTREDTMRNRLRLGQFNTVRQGASFVEQWSDGYAFSEINKKLSNVXXXXXXXXXXXXXXXXRRPPSERAXXXXXX---------XXXXXVDEDGFRRPGVPVSALSFSEYHEQEEILRLRTNQIXXXXXXXXXXXXXXXRGRNIHIRELKRVHNEDQSRYNTNPILNSQYLLLQLIGKGGFSEVFKAFDLKELRYVACKVHQLNKDWKEDKKANYIKHAVREYNIHRSLNHPRIVKLHDVFEIDSNSFVTVLEYCCGNDLDFLLKQQKNIPEKETRAIMMQVVNALKYLNERKPPVIHYDLKPGNILLENDGFMSWEVKLTDFGLSKILPEDGCD-DSIDLTSQGAGTYWYLPPECFVVGKAPPKISSKVDVWSVGIIFFQALYGRKPFGHNLSQASILEQNTILKATNLDFPAKPPVSQEAKNFIRRCLTYKKDERADVFALAEDAYLKP 2280
            ++ KE+  + + + K  LI++++ ++  +RE +M++RLRLG F TVR GASF EQW+DG+AF  + K+   V QQ+ED+++Q+K L KR+PP+    +             K     + D F RP +P   L+ +EYHEQEEI +LR   +KKEE E+Q ELE+LER RN+HIRELKR++NED S++  +P LN +YLLL L+G+GGFSEV+KAFDL E RY A K+HQLNK W+++KK NY KHA REY IH+ L+HPRIVKL+D F +D+++F TVLEYC GNDLDF LKQ K + EKE R+I+MQ+VNAL+YLNE KPP+IHYDLKPGNILL  DG    E+K+TDFGLSKI+ +D    D +DLTSQGAGTYWYLPPECFVVGK PPKIS+KVDVWSVG+IFFQ LYGRKPFGHN SQ  IL++NTILKAT + FP KP VS EAK FIRRCL Y+K++R DV  LA D YL P
Sbjct:  261 EKYKERLNKCISMSKKLLIEKSTQEKLSSREKSMQDRLRLGHFTTVRHGASFTEQWTDGFAFQNLVKQQEWVNQQREDIERQRKLLAKRKPPTANNSQAPSTNSEPKQRKNKAVNGAENDPFVRPNLP-QLLTLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRINNEDNSQFKDHPTLNERYLLLHLLGRGGFSEVYKAFDLYEQRYAAVKIHQLNKSWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDTFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIVMQIVNALRYLNEIKPPIIHYDLKPGNILLV-DGTACGEIKITDFGLSKIMDDDSYGVDGMDLTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFFQCLYGRKPFGHNQSQQDILQENTILKATEVQFPVKPVVSSEAKAFIRRCLAYRKEDRFDVHQLANDPYLLP 736
The following BLAST results are available for this feature:
BLAST of TCONS_00025716 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TLK11.281e-16959.41Serine/threonine-protein kinase tousled-like 1 OS=... [more]
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