TCONS_00025712 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025712
Unique NameTCONS_00025712
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2041

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025712 ID=TCONS_00025712|Name=TCONS_00025712|organism=Clytia hemisphaerica|type=transcript|length=2041bp
CGCGCGCGTCTCTTTGTTATGATCACGTGATAAAAATGAGTCTGCATTCT
TTTCGAATCTTTGCTGGCCTggtccgccattttgtttttcgcTTTGATCG
ACCTTCAAAGATCATGTCTGCTTGTATGATTTCAGAAAAACAACTTGATA
TTGGAGATGTTATTCGACTGTTGGAGAATCTTGATCAATATAATAATGTA
AATGTCCCACCTATCAAGCCAAAAGCAAGTGAAGTTTATCTTTTCGTTCC
AGCTTTTGAAGAAGAGCAAGAAAATTGGAAATGTGATCAATACCGATGGT
TGAACTATGGATCCAAAGATATTCCCAAACGAGATCCATTGGTCAAAAAG
CTTTTCTTCATTGGTAAAAACCCTGATGGTAAAACCAGCAAATTTCAACG
ACATGTTTACACCTTAATCGGTGAACAACGATGTCCGAAACCAGTGCTGG
TGCATTACATTGGTGATGAGAGTGTTATGATTGACCATCCCCACGGTAAC
ACAAAGAAATCCAGTGAACCATACTATGCTACAGCGCCATCCGTCAGAAA
GCATATCAGCTATAAAGCAAAATCACCAAATGGTACACCCAACCGTGTTT
TACATGAGCATTCGTTAGATGGACTGGATGGTCTAAATCCTGTCTTAACA
CCGAGAAATAAGATACAAGTTCGAAACATTCGACGTAATCTGAAAAAAGC
TAACGAGAAACAAAGACCGTCAGCTGAGGACATGGCTACGTTATACAGTC
TTGGAACAGAATTACCAGGATTCTTCCACTATGTTAGAACATATCCAGAT
TTTGCACTCATCTGTGGTTTGAATGATTTAGCATTAGAGGTTGAAAATTT
GCTAAAGTTAAACGCTGGACCCCTTGTTTTTTCCTTTCATGAGACATTCA
AAGTTGGGAAATTTTATGTCACCACTTTTAATTTTGTACATGCTGCGTTT
TCGGATCGCCCAGTGATTCCATTACACTTCTTGATCACTGAGAGTACTGA
TGAATACGCCCTGTACGAACGTCTCTTACGAACTGTCTCAGAGAATGTTC
CGATGCTTGACCAATTGGAAACAGCTGTAGTAACGAGTcaagaaaataat
tttgctACTCCTTTAAATATGGTTTTTCCGAATTTCATGCAAGTTTATGA
TTGGGAGTTGGTTCTAATGACGGCTCGTTCATGGCTTCGTAAAAACAGCC
AAAACGTTAAAATTATTACCGATCGAGCGGAAGACATGCGTGTATTATTA
AACAGCCCTTCCTATGATGACTTCTTACAAAACCTAGAGAAATTAAAGCG
GCAATGGGATGAAGGGTTTATCAACTATTTTAACGATTATCTACTGGAAA
TTATTCGTAAAAGACTTGGTCGCTGGCTTCTAGAACGTTACAAGTTGTAC
CATCCACAGATGGGAGTTATTGGTGCACGAAATTTAGATCTCCAAATTGT
AGTCCGACATTTACAAGAACTGAAAGAAGTCACTTTAGACATACTTATCC
CTTCCCTATATCATCTTCAACTGTATTTATCGACCAACATTATGAAAGGC
TTCTGTGGTTTGGGAAGGTATAAATTAAGCCCTGAGTTGAATTTCTTACG
GCGTGAACCCGATGAATTGATCCTACCGAATAAATTGTACGAACCACAAG
AGATtgtgaatattttgaaagttcGTGGTATCTCTTTGGTGTTTGAAGAA
CtacaagaagaaggagaagtTGGCAGTGTCATCCAAGCACAACGTATTGT
TGAAATGAACAACATCATACATTGCCATCAGTTACAGGCTTTCATGGTGA
AATCACCATCAGGGGGTTTACAAGCAGTTCGTTTGTTTCCACGTGAGTCG
TGTTCATGTTCATTCTCACAACGTTGTTCACACATCATGGCTGTTATGTT
GGCTGTTGGATTACCGCTTTTCCCGGAAAGTGCTCCTAAATCTAAAAAAG
GGCGTAAatcaaaatccgccaaattcgTACGCCCATCAGTACCGCCTCCC
GCCACAATCACCACAATAGAAGCAACGCCCCAGCCACAACN
Run BLAST on NCBI

transcript from alignment at sc0000543:86943..106145-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025712 ID=TCONS_00025712|Name=TCONS_00025712|organism=Clytia hemisphaerica|type=transcript|length=19203bp|location=Sequence derived from alignment at sc0000543:86943..106145- (Clytia hemisphaerica)
CGCGCGCGTCTCTTTGTTATGATCACGTGATAAAAATGAGTCTGCATTCT
TTTCGAATCTTTGCTGGCCTGGTCCGCCATTTTGTTTTTCGCTTTGATCG
ACCTTCAAAGATCATGTCTGCTTGTATGATTTCAGAAAAACAACTTGATA
TTGGAGATGTTATTCGACTGTTGGAGAATCTTGATCAATATAATAATGTA
AATGTCCCACCTATCAAGCCAAAAGCAAGTGAAGTTTATCTTTTCGTTCC
AGCTTTTGAAGAAGAGCAAGGTAAATTTCCAATTTCCAGTCCTTATTTTT
CGATTCACCCGAATGCATAAAACATTTCGAAGACCCAAAGCTCCACTTCT
CGGAATGATTTCAAAAACGAAACTGACCATGTGTTTTGGGATAAGAATCC
ATGTATGGTTCTGCTCTTCATCAACGTTCTGTAATTATCTTCATTTTATT
CTCCTAAATTTGAATTGTACAGTAGCTTAAGATCTTTTACAAGGGATATT
CCTTTTTTAATGTTAGACATAATGCAGACACTCACCACTCTTTTCAATTG
ATAACTTTTTCCTTTAAGCTCTAGGCCAGGCGTAGTTAATCGATATAATC
GATAATAGACCTTTTTTCNCATAACTTTTTTCCTTTAAGCTCTAGGTGAA
CATGAGGGTCTACTGACAGTCTAAGCTTAAATTCCTATATCAGGATTAGA
AACTAGGCTAGTTATACCCAGGCGGTGTCAATCGAACTAATCAAACCATA
TCGAACGATAGCTGTTTGATTACCGAACCCAATCGCGAACACCTATCGAA
CCGGGAAAACCTTCATAAAGTTCGATGACGGTTCGATTATACGATTATAA
TTCGATCGTAGTTCGATGAATACGATGATTGAGGTTCGATCAGTTCGATT
AAGATCGATGAAGTTCGATTGGTTCGATTAAATCGATTTATACCTTGCCG
CCAAATTTTTTATTTATGTTCTGAGGGCGTATTGGCGGCCGCCCACGGGC
CATTCTAGTGGGCCATCCTATATCTATCCCATGAGGCACCCCCAGCGGTT
TGCGTGGATGACGTGATTGGGACTTTTTTCTTGCGTGATGGCGTGATTAG
AGATTTTTTTTGGCGTGATGGCGTGATCAAGATTTTGGCATGATGCATGA
TAGGGCAAAAATTTGAGGCGTGATTTGGGCTATTTTTCGCTATTTTTTGC
GTGATGACAAATTTTAGTGATGCGTGATGGAGAAATTTTTTTTGCGTGAT
GGTGTGATTAGGGGTGCCGCTGGGGGGCCTCATCTATCCCATCGGATGGG
ACAAGCTGGAGCTTTTACAAGTAGACAGGTAGCTGACGACATCTAAAATC
TAGATTACTTTTGGACAAACGCAGAGTTGGGTTTTCTTGTTCCCATATAT
CTACTGATCCTAAAAATTTTACTTGGCGTCCGAAAATTTATTTAACGGAC
ACGTCCGGTAGTAATTTGTCAACTGATGAAGTCACCACCAACACATAGTA
ATGATATATATACCATTTGACACATTTTTTTATGTAGATTCCAAATCACA
TCAGTCTCAATAAGTAAAAATTTAGATATCAAAAGTTATATGGATCTCCA
GGCCAGTCAATCACTTGTCCATCAATTTCACCCAAACTTATTATGGCACC
AAGCGGGATTCAAACCAACTCCAAAGAAAGACCATTGTATTACGAGAAAC
CGGCACTTTATCCATTGAGCCATCGTTATGACTCTCGAGCTCAAACCCTA
ACCCTAACTGATAATGACTCAATACCCCCTGAATCACTGAATGACGGATA
GAAAAAATTATTAAGGAAAAAAATTGCTCATCGCGCTTTGAGCATGAAGA
GAAATTAGTCTACTGTATAACTAATTACTACAGCTTAAATTATGATACCT
CCATACTTAAGTACATTCCATACTTAAGGATAGTGAATACAAGTAAAACC
AGCAACAAGAAATTAGATATTATATTACCTACCGTGAAGTAGGGTAACTT
GCATCAGTGGAAGGAAACTTGCATCCATCAAATGACTGACCAATCAAGGC
AGCAGAATTTCAAAACAAATGAGCTATGGAGCTCCGCTCGAAGCTCTACT
CTACCATTTTGTTTTGATTTAACTTTGTATTTTAATGACCAGCCAGGTAA
TTCATTTTGAGGGCTATGCATGTTAGCCTCCACTGATGTATGTTACCTGA
TCCCACGGTATAAATCAGACGGTACTAGCAATAAAATTGAATATTGAGTC
GATTGATAATGATCAAAGTAATAATAATGATAGAAGTACACATTGTTTTT
TTTTAAGACAGTGTAGACCTAACTCTTCATACAAAAATTACGGGAAACGC
ATATTTGGACTTTGTACCCTATGCTGCACGCCAGCACTTAAGCTGAAGTC
CCGGAAAAGCGGGATGAAAATCAGTTTTTTTTTCNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNAGGCAAATGTTGCAATTGAGGGG
CAGATGACTTTTATGTTGTGCAAAAATGCTTCACGGTTGACTGCGTTGAA
GGCGTTTGATGCGTCGACTAACATCACAGCTTCACACTCGTGTTTGTTGA
ATATCTCTCTGAGGGCGTGAATAGCGGCTTCACAACCTGCATCTTGGCCG
GCACAAACTTGCAATGAACCGATGGAATCGGTGATGTCTTGTTTGAGCAA
TCTTGATACTGTCTTGCCGATGATTCTCCGTAGTGTTTCGCCGATACCGA
TCGGTTGCAGGCCTGGGTTTTTGTTCAAGGGGATCAGCCGGCTGGAAAGG
AAGGCTTCAAGAGATCCATCCGATTGGATAGTGGTGCATAGACGTTTCGT
AAATTCAGCTAAAGACGTGCATAGATCGTTTGATTCGGTCTTAAAGCTGT
TCGAACAAAGCATNGAAGACGATTTTTTGGATGTGACGTCAGATAATTTT
ACTGTTGATGGCAATGCAGGAGCTTCCGTCTGATTTTGAGGATTATTGGT
GCATTTATTTTGATGGAGAGTTTTCCCTGATTTCGATTTCAAAACTTTGT
GGCAAAAGCTGCACTCAAACCTGCTCTGATTCTCGGATACCATTTTCGTC
TCTGTGGTCGGTGGCGTGAACGCTTATCTCTCTCTCCGGAGAAAGATAAA
GACAGAAAAGGCTGGAAATGCCGGAACACTTCAGAAAATTGGGGGGTCCC
CTGTAATAGGCTTCCCGCAGAGCCCGAAATTTCCAGGAAGGAAAAGAGTA
CGAGAAGAAAGAGAACCGACTCACCAAGAAAANGTGTTTTTGTCTCAGCG
CGTTCAATGTCACATCATCTAGAGGAAGGATTCCGTTGCTCATGTTTTTG
CTGAGTAGTTTTATTGCGCCGTTTACGTTGCCTTTCGACATTTTCTTGAT
GAACTCCTCTGTGATCTCTTTAACGGACGATCTATTGGTTTTAGACGACA
GTAGGTGTCTTTGAATGGTCTCTCCTTCGTGTAGAAGATTGAAAAGGTCT
CCCTTTTCCCATAGATCGAGGCGTTTTGAAAGTGCTGTTGCGTGCTCTTT
AGATTTTGATTTGCGCGAAGGTTTCTGCAACAGGAGGGCTGGCATAATCA
TGATTGCTTTCAGGGATATGGTTTTGATTGACGAATCTTCCACCCAGCTG
TTGATGAGTCGACTGAGTTCGCGGATGAATCTNGGTATAATAACAAAGGC
TGATGTGATATTTCGTGGTGGACGGTGGTTTCTAGAATTCGGAGCAACTT
GAATATTTCGATCTCACCTCAAATTCCGCTTCTGGGATGGCGATTTCTCA
ACTTCGATTTTTTCCGTTCAGGAGCACCTCCGCCATCTTTAATCGTCAGT
CACATTGCAGTTTGCAAAAAAATGCCACAGAAGATCTTTCAAATTCAGTA
TGTGAATAGAGAAGTAAAAAATACAACTTTTCTATTTTTCCTTTTTTTTG
CAAAAGTTCTAAAAATGAAAATAAAAGGATAATGATAATTGAATACTATC
CACTGATGATCCGAGGCGCCATCGTAAAGCTAGAATCGCTTTGCGTACTC
TTCGCTTGAGAAAATGATCGACAGATTAAATTTTTCACCTGCTCAGGAGT
TCGCGGACGTTCTGTGAGCGGTCTGCGAGTGTTCTCAGCTCAATCCCTGG
ACCGTGTTAAAAATGGTAGACTCAGCTGTGACAGATCATTTCAATGGAAG
TTGTTGGAATGTTTACAAGACTCTTGACAGAAAATCTTTTGTTTTATTGT
CAATGATGACAGTGTTGTTATTAATTTTTGTTAGATCTGAAATATTGGTG
TTTGTAAGTGCACTTTATAGTTTTGATTCCCATTGAAGAATCATATTCTG
GTTTTCATGTTATTAGATGCTGTTTTAGAGCTTTAGAGCTACACTGTAAG
AAACTAGTTTTACCAAGCAGCCTCAATGTTTCTTAAGAAATCGGCCTTTT
GAGCCTTAAATAAATGTTTCTTACATGTTTTTAAACTTTTTGACATAATA
AGCCTATATAATATTATTTTCATGCAAAGAAAAAAAAACATTTGTTTTGA
TTGGAGGGTTCTTAAAAAAACTGAATTAAAAAATGTTATTTTCTCGCCTC
AGCATGTTTCTTAGATGTTTTTTTATAGTTTTTAGGCATTCTGAGCCTCA
TGTTTCTTAAAAGTGTGTTTCTTACAAAAACGTGTAATGCTAGGATTATT
GACATACTTTTCCAGGGGGTTCTTCAACCCAGATTTTCCAAGTGATTTAA
ATTGGGGATCAGAGACAGTTAGGGAAACCATCCAGGCTCCTGCCATCATG
GTATGCAGAGGGGTTCTAGGTCCCCCCAGAAAATTTAGCCCCCCCCCCCT
AAAAATTAGGTACCCCCTGACATAAAACCTCTCAGCCCCCAGTAGAATAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNAGATCTTTCACATGCAGTTGTAGGTCCCCCCAGCAATATA
GGTACCCCCTAAAAAATTAAATTTTGCCAGCCCCCAGCCAGAATATGGTA
AAAAAAAAAAATAGGTCCCCCCTAATCTCTGGGGGGGTCATACCATGGCC
ATTCTATAAGCCAGCAAAAAGTAAATGACACTTGTAGACTTAAGTTTCTT
ACTATTTTCTATCGAAAATAACCAAAAACATTGCTTCATCTCTAAGCCGG
AGACCAAAACAAATTATCTTCCAAGATTATGGCGCCCTTTTGGATCTATT
GTTGAGGCCATCTAAAATGATGGAAAGAGTTGCAGAAAGACAAAGGCACC
TGTTGCTTCGAGGGTGGTAGCGCCAAAACAGCCAATATGATCTTCCAACA
GAAGGCGAGTTAGTTGCCGCGCGAGTTATGTCATGCACTCCACCACAGCG
CACAACGAAGCGTGTTTTAATAAATATCATTAATTATAAGAATATCTTAT
GTGCTTACCTTCAGTAAACTTGAGTGCTTCATTGAAAATGAAGAAGGTAA
AAAGATAAAAAATGCGCTGGATAATTTTCATTTTGACGTCAAATTTTTTC
TGTGCTGCCATGATCCTGAAAATGCAATAATATGGCAGAAATCAACGAAA
ATTCTAACAAGGAAATTCAAAAAAATTATGAATATTGCACACCCAACAAC
TGTTTAACAAACACTGTCATAGCAGATAACGACACCTTACAATGTAGGAG
ATGTGATAGACTTGTCCATTATGCTATTAGGCCTATCAGATTCAGCTTTG
TCTGCAATATAAGACCCGGCGCTTCGAATGTGGAAATTGTGTTACAATAA
CGCCACTCTTACTTGAGAGGATTAAAACAAGCAGACAAAAAGCTCGCAGT
AACATCACAACGAAAGAAGTAGATAAAGACGAACATCATGGATTGAAATT
AGGTTTCAACAAGAGAATAACCTCTCTAGAAAGGAAAGTCGAGAAGCTAA
TGAATAAAAAAGACGTCAACAAAGAACGAAACAACAAACAATCTAAAGAA
CAACTCAACAACAAAGAAACAAAGAAACAATCATATGCAGAAGTCACCAA
AGAAGAAAAAATTTTCCGACATTATTGCCAACTCAGGATTTATGATTTGA
AGATGATTCGGTCAGGCGACGCGAACAGAACATATTATTGATGATCGCCA
AAGTTTTCCATGACCAGGACCAGGAATTCAATGAAAAAACCATAAAATTT
TACTTCTCAGGGGACTCGTAACTCAATTTCCAGGGTATGATGATTGATAT
TGGAAATTTTCTTAAACTCTAAAACAGCATCTAATAACATGAAAACCAGA
ATATGATTCTTCAATGGGAATCAAAACTATTAAACGACTTACAAACATCA
ATATGTCAGATCTAACAAAACTAATAACGGCACTGTCATCATTGACAATC
AAACAAAGCATTTTCTGTCAAGAACCTTGTAAACATTCCAACAACTTCCA
TCAAATTGATCTGTCGGATCTAAGTCTACCACAGGGTTCAGACAGACCCT
GGAAAACCTCGAAAACCTGGAAATATGATAAATTTTCAGAAAAATCAGGG
AAACTCAGGGAAACCCAGGGAAAAAATTTTTTTACCAGTCTGCTCAGGGA
AACTCAGGGAATTTTATTTTTTGAAGAATGAATGGAATAAACAGATTTAA
AAGTTTTTTTAGTTTTAACCCTTTCCGGACGCACGGTCCACTATGAATCG
TGTTCCTATATGACGCACGTGGCCCATAGCTTTGTAAAAGATTTTAACAG
TTTTCGCGCCAAAATACAATAACATGGTTTTGAATAATGATTTTGAGATA
AATTTCCCGTAACCTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNAATTCTCTAAATCATATTCAAAGTTCAA
GGCGTAAAGCAAATGCCTTTAACTCTATTTCTTTATTCAAAGTCAAAAAT
TTTGCCTTTCCGAAAAAAAATTTCATGTTATTTTTCGGTCACGTGACCAG
GTGTCAGCCATATTTAAAATTTTTTTTTTGGTATTTCAAAACCCCTATTA
CATGTGAAAAAAACGAGGTATTACTTATCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGGTATTACTTATCGTGATATCTTTTATCAATCACTTTCTATTGCAA
TTTTAGTGAAGCCAGTCAAAAATCAAATTTTTGTTTGCGTCATATAGCCG
TGAAATGATGCGTCCGGAAAGGGTTAAAGTGTTTATTCATATGCAGTATT
TGTAGCTTTAATTTTTACCTTAGGTTTACCATTTGATTTGCGTGCCTTTT
GTTTAAAGATACATCTCTTTTGACTCTGCTTAGTTTTTATGGTTTGCTTG
ATACTCAGGGAAAAAATAGCTAAAATGAGGAATTTCTCAGGGAAAAAACT
ATTGAAAATTGATTAAAATTCAGGGAAACTCAAGGAATTTTATTTTCGAA
GGTCTGTCTGAACCCTGTACCATTTTAGCGCTGTCCGAGGATTGAGCCTA
GAATGCTCGCAGAACACCCGTGAGCTCACGCCTGGGTGAAAAACTTTAAT
CTGTCAATAATTTTCTCCAGCGAAGAGTAAGCGAAGCAATTAGCTTTGCG
ATAGTGCTGTGAGTCATCAGTGGATAGTATTCAATTATCATTATTAAAAA
TTCTTTGTTTTCATTCCTAGAACCTTTGCAAAAAAAAGGTAAAAATAGAA
AAGTTGTATTTTTTACTGCTCTATTCATATACTGAATTTGAAAGATCTTC
TTATGTGGCATTTTTTTGCAAACTTCAAAAAACTGATTTTTGTCCTGCTC
ATTGCGGGACTTAATGTCTTTAGCTTAAGTGCTTGCATGCAGCATAGGGT
ACAAAGTCCAAATATGCATTTCATATGCATAATTTTTGTATTAAGAGTTA
GGTATATACTGCCAAGAGGGGTATATGAAAAAAGTTTGTCAATACCCTTG
TATGGGTTAAAAATGGAATAGCTAATTTTTTTATTTCCTTTTTAAAAATC
CGAAATCGGAAGAAATAATGAAATAAAATTTTGTAAAATTTCCTAAGGTA
TCGATTTTTAGATTTAAAGACAAAAGAATAAAGTGCAAGATTTTGTTCTC
AACTTCAGTTGAGCTAGAATCTGACAATGTATGTGTGTATGTGTGTATGT
ATGTCTGTCCGAAAACTTTGGGGCAGGCTGGAGACTTCAAAAATGATCGG
GTTTGGCTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTGGGGGTG
TTTTTTTCATTTTTTGAAAATTTTCATTTTTAAGGGTGTGGTCACGAGTT
TTCGCCAAAACGAGGCTAAAACTTTGGGGCAGGCTGGAGACTTCAAAAAT
GATCGGATTTGGTTGAAATTTGGCACACTTGTTCCTTGGGTGAATATCTG
GGGGTATTTTTTTCATTTCTTGAAAATTTTCATTTCTAAGGGCGTGGTCA
CGAGTTTTCGCCAAAACGAGGCCAAAACTTTGGGGCAGGCTGGAGACTTC
AAAAATGATCGGGTTTGGTTGAAATTTGGCACACTTGTTCCTTGGGTGAA
TATCTGGGGGTGTTTTTTTCTCATTTTTTGTTGAAAATTTTTATTTTTAA
GGGCGTGGTCACGAGTTTTCGCCAAAACGAGGCTAAAATTTTGGGACATG
ATGGAGACATCAAAAATGGTTGGATTTGGTTGAAATTTGGTACACTTGTT
CCTTGGGTGAATATCTGGGCGTTTTCTTTTTCATTTATATCTTCCATATT
TTATCTATGTTCTATTTGTTTCATTTAGAGTAACATGAGAGGTTTTAAAT
ATATATATTACATTTACATCACAATCTTAACGTCCTGGTTTAATTCTGGT
GAAGGGGTGTTAAGAAAGTGATGGAATACTCACAAGTTTTTTCAATTTTA
GGCAAATACTTTTTTANTTTGAAAATTTTCATTTTTAAGGGCGTGGTCAC
GAGTTTTCGCCAAAAAGAGGCTAAAACTTTTAGGCAGGCTGGAGACTTCA
AGGGCGAATCCCTGTTGGTGGTTTTCATTATTTTATGATTTCCATTTTAA
GGGGGTGGTCATGAGTTTTTAGTTGAAATAGGTTACAATCTTACAATTGG
GCCTACGAATGATTTAAAAACACTGAAGTTGAGCCCAGTGCGGTTAGCAC
GTTCGACAGTTTTGAAGGTCGGAGGAGAAAAATTAAATAAAAGTTTTTGA
AATCTCTATTTTATTTTTTTTCTATTTTGGCAAAAATAACGTCGGCGGAT
CCGTAAACCAATAAATAAAAAAGTATTTGCCTAAAATTGAAAAAACTTGT
GAGTATTCCATCACTTTCTTAACACCCCTTCACCAGAATTAAACCAGGAC
GTTAAGATTGTGATGTAAATGTAATATATATATTTAAAACCTCTCATGTT
ACTCTAAATGAAACAAATAGAACATAGATAAAATATGGAAGATATAAATG
AGATATGGCACAGTCACTTTCTGTCCTCCATTTTCAAAACCAATACAATA
TAATGCATTAATAACAAACCAAATACATTGTCTGTTGTAGTCAAAATAAA
CCCAACATTATATGCATCAACAAAATAAATGACGCAATCAGAGAGGGAGC
CTGCGGATATATACGTGTCAGCCGCAGATCTTACTTGCATGACATGAAAT
GTCGATTATAGAGTTTTTGTATTGTGGCCATACAGCCAGCAACCTTTGTG
ATGATGTATTGCTCACTGGATTTATGTTTGGAGCCTTCTTGCTTGATGAA
CACTAAGTCACCAACTTGGACTTTAGCGTCTTGAGCGGTATCTCCTCCTC
TGCCTTTACATAGAGCACTGAGCTGGTGGTTCCATTATCTGAATATCCTT
ATATCAATAAGGTTGCGCTACTGTTTTTATTCTTGATTCTACCGTAATCA
AGCACAATACCGTGAGATGATAACGTTTTTGTCTTCTTTGAGGCTTTGAA
AGCCAAGAGCGGCATCGACACAAATGATAGCAGTGGAAGTTCTGAGATGG
TTCGTTGTAGAGATGACTCCGGAGCAAAGACTGTTGGCTTTTTCATCAGG
AATGAAAACAGTGGTGTAGCTCGAGAAAACGTCGCAGGAAACAAGTAGCT
TTTGCTTTGTGTGACGTAGGACATCAGTAAAGAACATCTTTTAGGGGTGT
TGTGGAAGGGGTGTCGAGTTCTGCTTGAAGACTTCATTGGGCAGCTTCAT
TAAAGATTGACATGTATGGTAGTTGGACGCAACGGAATCGATTGCTGAAG
TACTATTGATTGCGTAGAAGAGCCGATCAAAAACTTTTTGAAGCTGTGTG
CGGTTGGGATGATTCAGTTGAATGTGAAGGGTGGTGACAAGCCCTGGTAG
GATGACAGAAGGTACCACAATAAGCTGTCACTGCTGGTGGACATATGGAT
CATTCTTCTTGACAACGAGTAGGTTACTGTTGGAAATTGTGGCGATATGT
AGGTACTTTCGAACGTCTTGAATGTGTCTCGTCTTCCTTGCTGGGCGTGT
CCCATTTTGCAAATGGGCAGAGGGCAGTCTTGTTGGGTTGCATGCCAAGC
ATGGTGATTGAAAATGGCATTGGTGCTGCACTGCTAAACTCGAGATATTC
TCCAGGAAGAACAACATGGCTATTAACACTTCGAAGAATAAACAATTCAG
CTCTGAATATGTCTGACGGTCTATTTGCCATATGCCAAGTTGGAAGATAA
GATAGTTATCATTTTCTTTTTCAAATGAACTTGAATGTCCATTCTCTTTA
CAGAATGGTACGCCAGCTAGTAAATCACAGTTGATGGTATCGACCACTAA
TGCGGTAATAGGTAATGGTATGCTGCCAAAGTTAAGTTGTATTTTGACTT
CTCCATGGATTTTTAAGGTACTTTTATCTACAGAACGTGCTGAGTGTCTA
GTTGGTTGAATAACAATACCGGATCGCTTGATGAAAGACCTTGAGATGAG
ACATGATGTTGCACAAGTATCGATCACAATGTGAGCTAGATGGTGTTAGA
ACAAATAGAACATAGATAAAGTATGGAAGATAATCCTAGATGTGGTAAAT
GAGATATTGCGCTTCGAACAGCTTCGAAGACTCAATAACCGATTACAGTA
ACTTAATTGAGTACTTTGATTGTCAGTTAGTCACACTAACGTCCCGTCGA
AATGCGTATTAAAGATTAATGCTGCGAAAAGGCTCATAGTGGGCAGAGGG
GTATCAAGCCCCCCCTTAAAAATGGCACCCCCCTCTTTTAGCTCAACCCC
CCTCTTAAAAATGAAAATTCCTCAACCCCGCTCTTTTTATTCAACCCCCC
TCTTTTTCCCAGGTTTAAGTTCAACCCCCCTCTTTCTTTCGACCTTTTGT
GAAATAAGTGGTGGAAAAACAAAAGCAGCTGTCTTGCAAAGGTTGAAAAA
GCAACATACCTTATTGGTATATATTTTCGCGTGTTACAAATTTTCGCGGG
TACTTAATTTCGCGAGTTTTTTGGTCAATTTTCGCGAAATTTAATACTGT
TTAAATTTTTCAAAATTACAAAATCGCGAAATTAAATACACGCGAAAAAA
TTTTCCTTAGTATTTTGTTGGTATTTTTACATCAAAAACGTTGTGTTTCA
AGCAAAATCAGTCTTTTTCTTGCTTTATATTCCCACTTTCTGAAAATACC
TAGTTTAGAGAATCGCGAAATTTAATACACGCGAAAATTTTCCAGAAGTC
GGCAATCGCGAAATTTAATACACGCGAAAATTTTCCAGAAGTCGGCAATC
GCGAAATTTAATACACGCGAAAATTTTCCAGAAGTCGGCAATCGCGAAAT
TTAATACACGCGAAACACGTTTTCTCGAAAAAATTTCGCGATTCGCGAAA
ATTTGTAACACAGGAAAATATATACCAATAAGGTACTCCATCAAGAGTTG
TAGAAACAGAGTTTTTCCTTCATTCAAATGAATGGAAATATAATAATTGT
TGAGAAATTTAAAAATGAATGGAAAACACTCTTTTGCAAATTGTCAAATC
TTCCAAGCCCCCCTAAAAAATTAACCCTCCTCTTTTTGTCCAAGCCACCC
CTTTTATTTGAAATTTTCACAAGCCCCCCCCTTCTTTTAAATTCAGTAAA
ATTCTCAAACTAAAGGGGGGGGTGCCCACTATGCAGGCTATATCGTTTAC
TTGATTCACGAGCAAAAAAATGTGCTGCAAAACTTCTAAAAAGGGATTCA
TGAAAAATTAACCCAGAGCTTTTTAATGAAGCTAACATTTTCAAAAACTA
ATAGTGTAAAATAGGAAGATGGTTGATCTTAGCTCTAGTTTAGACGGCCG
ACTTTCTACCCTGCCTATTCTAATTGTTTGAGTAGGTAGAAAGTGGGCAC
AAAGTTGGCAGTTAAAATCTTCGCTTGGAAAAGGTTGAAAGAAGACATTG
CATTGACGTCAAAAGAGGGCTATGCATTGACTTTAGACAGCCCACTTTAT
GCCAACTTTAATTCACAATTAGAATAGGTAGGGCGAAAAGTGGGCCGTCT
AAACTAATTTAAGTCTTGTTAATTTAACAATTTCTTTTACACTTTACAGA
AAATTGGAAATGTGATCAATACCGATGGTTGAACTATGGATCCAAAGATA
TTCCCAAACGAGATCCATTGGTCAAAAAGCTTTTCTTCATTGGTAAAAAC
CCTGATGGTAAAACCAGCAAATTTCAACGACATGTTTACACCTTAATCGG
TGAACAACGATGTCCGAAACCAGTGCTGGTGCATTACATTGGTGATGAGA
GTGTTATGATTGACCATCCCCACGGTAACACAAAGAAATCCAGTGAACCA
TACTATGCTACAGCGCCATCCGTCAGAAAGCATATCAGCTATAAAGCAAA
ATCACCAAATGGTACACCCAACCGTGTTTTACATGAGCATTCGTTAGATG
GACTGGATGGTCTAAATCCTGTCTTAACACCGAGAAATAAGATACAAGTT
CGAAACATTCGACGTAATCTGAAAAAAGCTAACGAGAAACAAAGACCGTC
AGCTGAGGACATGGCTACGTTATACAGTCTTGGAACAGAATTACCAGGAT
TCTTCCACTATGTTAGAACATATCCAGATTTTGCACTCATCTGTGGTTTG
AATGATTTAGCATTAGAGGTTGAAAATTTGCTAAAGTTAAACGCTGGACC
CCTTGTTTTTTCCTTTCATGAGACATTCAAAGTTGGGAAATTTTATGTCA
CCACTTTTAATTTTGTACATGCTGCGTTTTCGGATCGCCCAGTGATTCCA
TTACACTTCTTGATCACTGAGAGTACTGATGAATACGCCCTGTACGAACG
TCTCTTACGAACTGTCTCAGAGAATGTTCCGATGCTTGACCAATTGGAAA
CAGCTGTAGTAACGAGTCAAGAAAATAATTTTGCTACTCCTTTAAATATG
GTTTTTCCGAATTTCATGCAAGTTTATGATTGGGAGTTGGTTCTAATGAC
GGCTCGTTCATGGCTTCGTAAAAACAGCCAAAACGTTAAAATTATTACCG
ATCGAGCGGAAGACATGCGTGTATTATTAAACAGCCCTTCCTATGATGAC
TTCTTACAAAACCTAGAGAAATTAAAGCGGCAATGGGATGAAGGGTTTAT
CAACTATTTTAACGATTATCTACTGGAAATTATTCGTAAAAGACTTGGTC
GCTGGCTTCTAGAACGTTACAAGTTGTACCATCCACAGATGGGAGTTATT
GGTGCACGAAATTTAGATCTCCAAATTGTAGTCCGACATTTACAAGAACT
GAAAGAAGTCACTTTAGACATACTTATCCCTTCCCTATATCATCTTCAAC
TGTATTTATCGACCAACATTATGAAAGGCTTCTGTGGTTTGGGAAGGTAT
AAATTAAGCCCTGAGTTGAATTTCTTACGGCGTGAACCCGATGAATTGAT
CCTACCGAATAAATTGTACGAACCACAAGAGATTGTGAATATTTTGAAAG
TTCGTGGTATCTCTTTGGTGTTTGAAGAACTACAAGAAGAAGGAGAAGTT
GGCAGTGTCATCCAAGCACAACGTATTGTTGAAATGAACAACATCATACA
TTGCCATCAGTTACAGGTTGGAATGATTTCTTTTAATTTTCTTTCATTTG
CAGAATGACGCAAATGATTTTCGTCAATCCAAACTCGCTCATCTTGCTTC
CCTTACTTTTAGATTTCAAATAAACGGGGGGAGGGGGTCGGAAAATTTTT
CGAGATTTTAATAAACGGGTGGGACCTAATTGCCGGGGGTTGGAAATTGT
ACTTCTGAAAACCCCAAAATAAGGTAAATATAGGCTAAAATCAGGCTATT
TAGAGCAAAATAAGGGCCTTCTCTTTGACAGCTGAAAATAATCTTAAAAA
TTAATTAACGGGGGGGGGTCCTAATAAGGTCCAGGGGTTGGGAAACTTTC
GAAAAATTAACAAGCGGGGGGCGTTTATTTGGAACCTAAGGGTACTTGAA
TTAATCAACTTGAACACTGTGTAGTCCTTAAATGAAACTGCAATTTCTGT
AATTTGTAGTGTTGGGTCACAGACTTTCATCGCAATAAACTATGTTTGAA
ACACAAGACTTTTTCTTGGTAGGATGGTAGGGAAACATGTTGATAGATTC
TCTCTACCTTAACTGCAATTTATGTGATTTAGTTTAGTAAGATGTTTACT
GGCAACAACAACTTTTTACGACATTACATATCAATGCAACCTTTCTTTAC
CAAACAGGCTTTCATGGTGAAATCACCATCAGGGGGTTTACAAGCAGTTC
GTTTGTTTCCACGTGAGTCGTGTTCATGTTCATTCTCACAACGTTGTTCA
CACATCATGGCTGTTATGTTGGCTGTTGGATTACCGCTTTTCCCGGAAAG
TGCTCCTAAATGTAAGCTAGATTCAACCTGTTTACTAATTTCCATTCCTT
TTGACGGAAAGTGCTCCTATGCACTTAGTTTGGCTTCTGCTTTATAACCC
AATTCGCTGGTAGATACACATTTTTTTTAAGAAACTAGTTTCACCAAGCA
GCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATGTTTCTTA
CATGTTTCTAAACTTTGTCAAGCTTAAAGGGTGCATGTCGATAATACAAT
AGTCTAATTGACTAATCTACGGTACTTTCCTATCTTCTATATTGATTTTC
TGACTTTCTCAAGTGTTTCTAACTGTCATGTAAGTATTTTTCTGGGACTT
TCTGCCTTTACCGGAAGGTTCTTAAAAAAAAAACGAATTAAAAAATGTTA
ATTTCTCATTCTCAGCCGCAACATGTTTCTTAGATGTTTCTTAGTTTTTA
GATATTCTGAGCATCTTGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAC
GTGTACAGATGCTACTCAGTTTACCATTTGTATTCCTTTTGACTGAAAAT
TGTCCCCTTTACTCTTCTCTCCTCCACCTCAGCTGCTTTTAATAATATAT
TGGTCCTTGACAATTTTACATCACTTAATATTGTATTCCTCCTTCACTTG
CAGCTAAAAAAGGGCGTAAATCAAAATCCGCCAAATTCGTACGCCCATCA
GTACCGCCTCCCGCCACAATCACCACAATAGAAGCAACGCCCCAGCCACA
ACN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014437XLOC_014437Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025712-exon-sc0000543-1575043694:105876..106145TCONS_00025712-exon-sc0000543-1575043694:105876..106145Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1575043694:88480..89996TCONS_00025712-exon-sc0000543-1575043694:88480..89996Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1575043694:87685..87838TCONS_00025712-exon-sc0000543-1575043694:87685..87838Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1575043694:86943..87042TCONS_00025712-exon-sc0000543-1575043694:86943..87042Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1510915933:105876..106145TCONS_00025712-exon-sc0000543-1510915933:105876..106145Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1510915933:88480..89996TCONS_00025712-exon-sc0000543-1510915933:88480..89996Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1510915933:87685..87838TCONS_00025712-exon-sc0000543-1510915933:87685..87838Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1510915933:86943..87042TCONS_00025712-exon-sc0000543-1510915933:86943..87042Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1491911889:105876..106145TCONS_00025712-exon-sc0000543-1491911889:105876..106145Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1491911889:88480..89996TCONS_00025712-exon-sc0000543-1491911889:88480..89996Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1491911889:87685..87838TCONS_00025712-exon-sc0000543-1491911889:87685..87838Clytia hemisphaericaexon
TCONS_00025712-exon-sc0000543-1491911889:86943..87042TCONS_00025712-exon-sc0000543-1491911889:86943..87042Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000543supercontigsc0000543:86943..106145 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.172012	0	0	0.27702	8.47371e-06	0.322776	5.3261e-05	0	0.895803	0.860996	4.39735e-05	0.0205832	0	5.96529e-08	1.4603e-06	4.88361e-09	1.37837	5.41668e-05	1.08217	0.0605788	0	0	0.000209374	0	0.0938667	0	0.093192	0.000363431	1.96937e-08
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025712 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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